+D GENES KO #

  KEGG Orthology (KO) - Bifidobacterium adolescentis ATCC 15703

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bad00010] D BAD_0231 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BAD_0066 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BAD_0834 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BAD_1079 gap; glyceraldehyde 3-phosphate dehydrogenase C K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BAD_0835 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BAD_0378 gpm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_0867 possible phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_0645 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BAD_0678 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_1117 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BAD_0319 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BAD_1082 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D BAD_0365 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BAD_0957 ppgK; similar to Mycobacterium tuberculosis polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] C 00020 Citrate cycle (TCA cycle) [PATH:bad00020] D BAD_0460 gltA2; citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D BAD_1052 acn; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BAD_0776 icd1; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_0809 sucD; succinyl-CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BAD_0808 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BAD_0593 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BAD_0592 probable iron sulfur protein associated with succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] C 00030 Pentose phosphate pathway [PATH:bad00030] D BAD_0231 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BAD_0631 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BAD_0629 probable 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D BAD_0628 gnt; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BAD_0197 putative 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BAD_0793 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BAD_0829 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BAD_0830 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BAD_0361 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BAD_0687 fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D BAD_1485 rbsK; sugar kinase in PfkB family K00852 rbsK; ribokinase [EC:2.7.1.15] D BAD_0365 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BAD_0898 prsA2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BAD_1484 prsA1; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BAD_0199 putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D BAD_0066 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00040 Pentose and glucuronate interconversions [PATH:bad00040] D BAD_0816 ugpA; probable UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BAD_1411 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D BAD_0793 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BAD_1410 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D BAD_0432 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D BAD_0422 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D BAD_0317 xylitol (sorbitol) dehydrogenase K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9] C 00051 Fructose and mannose metabolism [PATH:bad00051] D BAD_1030 mannan endo-1,4-beta-mannosidase precursor K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D BAD_1096 protein in PfkB family of sugar kinases K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D BAD_0422 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D BAD_0066 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BAD_0834 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:bad00052] D BAD_1082 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D BAD_1331 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BAD_1332 galT1; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D BAD_0391 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BAD_0816 ugpA; probable UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BAD_0365 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BAD_1582 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BAD_1605 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BAD_1603 probable beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BAD_1211 bga; beta-galactosidase I K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BAD_1401 bgaB; beta-galactosidase I K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BAD_0159 gif; probable UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BAD_1576 aga; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BAD_1528 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BAD_1525 possible alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BAD_1150 cscA; beta-fructofuranosidase (Sucrase/invertase); possible inulinase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BAD_1325 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BAD_0971 aglA; probable alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BAD_1561 aglA; probable alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BAD_0452 aglA; probable alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BAD_1571 agl; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism D BAD_1411 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:bad00500] D BAD_1150 cscA; beta-fructofuranosidase (Sucrase/invertase); possible inulinase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BAD_1325 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BAD_0971 aglA; probable alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BAD_1561 aglA; probable alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BAD_0452 aglA; probable alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BAD_0078 spl; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D BAD_0816 ugpA; probable UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BAD_1204 probable beta-1,3-exoglucanase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D BAD_1202 probable beta-1,3-exoglucanase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D BAD_1197 bglX; beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1194 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1598 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1611 beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1610 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1287 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BAD_0156 hypothetical protein K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BAD_0716 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D BAD_0667 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D BAD_0030 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D BAD_0708 pulA; pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D BAD_1559 pulA; pullulanase precursor K01200 pulA; pullulanase [EC:3.2.1.41] D BAD_0707 amyA4; putative alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D BAD_1571 agl; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D BAD_1560 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D BAD_0308 malQ1; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D BAD_1435 possible glycanase or glycogenase with amylase domain K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D BAD_0751 glgA; possible glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D BAD_0683 treX; probable glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D BAD_0311 probable glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D BAD_0365 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BAD_0231 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BAD_1096 protein in PfkB family of sugar kinases K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bad00520] D BAD_0640 possible B-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D BAD_1602 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D BAD_1096 protein in PfkB family of sugar kinases K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D BAD_0473 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BAD_1294 mrsA; phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D BAD_0871 bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D BAD_0183 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BAD_0294 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BAD_1205 xsa; alpha-L-arabinosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D BAD_0428 xynB; beta-1,4-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BAD_1203 xynB; xylan beta-1,4-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BAD_0423 alpha-L-arabinofuranosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BAD_0957 ppgK; similar to Mycobacterium tuberculosis polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D BAD_0365 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BAD_0816 ugpA; probable UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BAD_1331 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BAD_1332 galT1; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D BAD_0391 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BAD_0159 gif; probable UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BAD_0231 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BAD_0716 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:bad00620] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_0992 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BAD_0319 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BAD_0689 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BAD_0688 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BAD_0678 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BAD_0254 JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BAD_1117 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BAD_0314 ywbC; hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D BAD_0024 narrowly conserved hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D BAD_0145 possible TetR-type transcriptional regulator K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bad00630] D BAD_0460 gltA2; citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D BAD_1052 acn; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BAD_0254 JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BAD_0820 probable hydrolase or phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D BAD_0943 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_1123 glnA2; glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_0902 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_1344 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D BAD_1196 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BAD_0403 fucO; possible lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00640 Propanoate metabolism [PATH:bad00640] D BAD_0689 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BAD_0688 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_0992 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BAD_0254 JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BAD_0808 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BAD_0809 sucD; succinyl-CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BAD_1117 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BAD_0403 fucO; possible lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:bad00650] D BAD_0319 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BAD_0593 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BAD_0592 probable iron sulfur protein associated with succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BAD_0992 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BAD_0221 ilvB1; acetohydroxy-acid synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BAD_0220 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:bad00660] D BAD_0221 ilvB1; acetohydroxy-acid synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BAD_0220 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BAD_0808 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BAD_0809 sucD; succinyl-CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BAD_0179 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BAD_0180 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BAD_1340 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:bad00562] D BAD_0548 possible inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BAD_0158 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D BAD_0834 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bad00190] D BAD_0593 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BAD_0592 probable iron sulfur protein associated with succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BAD_1429 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BAD_1427 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BAD_1428 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BAD_1430 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BAD_1426 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BAD_1433 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BAD_1431 protein with similarity to ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BAD_1432 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BAD_1444 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D BAD_0127 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:bad00680] D BAD_0902 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BAD_0645 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BAD_0024 narrowly conserved hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D BAD_0066 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BAD_0689 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BAD_0688 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BAD_0378 gpm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_0867 possible phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_1112 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BAD_0383 serC; probable phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BAD_0545 serB; probable phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:bad00910] D BAD_0008 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BAD_0943 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_1123 glnA2; glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_0748 gltB; glutamate synthase [NADPH] large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BAD_0749 gltD; glutamate synthase [NADPH] small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D BAD_0012 icfA; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:bad00920] D BAD_1434 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D BAD_0491 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bad00061] D BAD_0254 JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BAD_0256 fas; probable fatty acid synthase Fas K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D BAD_0935 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BAD_1409 fadD1; probable long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0724 fadD2; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0774 fadD4; probable long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0779 fadD3; possible long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:bad00071] D BAD_1409 fadD1; probable long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0724 fadD2; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0774 fadD4; probable long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0779 fadD3; possible long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0319 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:bad00121] D BAD_0856 choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bad00561] D BAD_1196 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BAD_0912 hypothetical protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D BAD_1015 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BAD_1576 aga; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BAD_1528 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BAD_1525 possible alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:bad00564] D BAD_0185 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D BAD_1015 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BAD_0048 hypothetical protein K01048 pldB; lysophospholipase [EC:3.1.1.5] D BAD_0785 cdsA; probable phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D BAD_1028 pgsA3; DP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D BAD_0801 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D BAD_0796 pgsA; possible CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:bad00600] D BAD_1208 probable glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D BAD_1582 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BAD_1605 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BAD_1576 aga; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BAD_1528 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BAD_1525 possible alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D BAD_0414 tesB; Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bad00230] D BAD_0682 possible pyrophosphate-releasing NTPase in MutT family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D BAD_0365 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BAD_0898 prsA2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BAD_1484 prsA1; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BAD_0521 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D BAD_0519 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D BAD_0525 purT; probable phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D BAD_0523 purQ_purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D BAD_0520 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D BAD_0516 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D BAD_0515 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D BAD_0524 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D BAD_0554 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BAD_0811 purH; bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BAD_0807 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BAD_0268 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BAD_0408 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D BAD_0777 GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BAD_0450 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BAD_0692 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D BAD_0686 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BAD_0213 possible amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BAD_0538 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D BAD_1216 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BAD_0497 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D BAD_1002 relA; probable GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BAD_1223 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D BAD_0648 possible exopolyphosphatase-like protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D BAD_1033 hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D BAD_0067 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BAD_0342 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BAD_1300 pucH; putative allantoinase K01466 allB; allantoinase [EC:3.5.2.5] C 00240 Pyrimidine metabolism [PATH:bad00240] D BAD_0536 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BAD_0535 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BAD_0759 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BAD_0760 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D BAD_0761 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D BAD_0764 pyrD; dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D BAD_0763 pyrK; probable dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D BAD_1334 dihydroorotate dehydrogenase-like protein K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D BAD_0765 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D BAD_0537 similar to orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D BAD_0762 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D BAD_0783 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D BAD_1414 hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D BAD_0709 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D BAD_0124 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D BAD_1216 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BAD_1580 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D BAD_0162 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D BAD_1003 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BAD_0388 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bad00250] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BAD_1087 racD; aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D BAD_0059 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D BAD_1173 L-asparagineamidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D BAD_1077 asnH; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D BAD_0831 probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BAD_0956 probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BAD_0919 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BAD_0918 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BAD_0067 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BAD_0554 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BAD_0759 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BAD_0760 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D BAD_0748 gltB; glutamate synthase [NADPH] large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BAD_0749 gltD; glutamate synthase [NADPH] small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D BAD_0008 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BAD_0943 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_1123 glnA2; glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_0536 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BAD_0535 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BAD_0473 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BAD_0521 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:bad00260] D BAD_0139 askA; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BAD_0141 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BAD_1416 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BAD_1415 thrB; possible homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D BAD_0903 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BAD_0527 tal; possible low specificity-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D BAD_0902 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BAD_1196 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BAD_0378 gpm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_0867 possible phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_1112 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BAD_0383 serC; probable phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BAD_0545 serB; probable phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_1344 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D BAD_0490 cbsSV; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D BAD_0650 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BAD_1570 tdcB; catabolic threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BAD_0791 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BAD_0790 trpBC; tryptophan synthase subunit(beta) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:bad00270] D BAD_0507 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BAD_0635 two-component system sensor histidine kinase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BAD_1170 probable aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BAD_0490 cbsSV; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D BAD_0756 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BAD_0541 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BAD_0275 pfs; 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D BAD_0268 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BAD_1233 modification methylase Sau3AI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_1283 kpn2kIM; DNA-methyltransferase MKpn2kI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_0493 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BAD_0139 askA; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BAD_0141 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BAD_1416 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BAD_1434 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D BAD_0491 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BAD_0598 cysD; O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D BAD_0421 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D BAD_0743 ilvE; probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BAD_1213 possible glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BAD_1117 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BAD_0650 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BAD_1112 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BAD_0383 serC; probable phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:bad00280] D BAD_0743 ilvE; probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_0254 JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bad00290] D BAD_1570 tdcB; catabolic threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BAD_0179 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BAD_0180 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BAD_1340 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D BAD_0221 ilvB1; acetohydroxy-acid synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BAD_0220 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BAD_0081 ilvC2; Ketol-acid reductoisomerase 2 K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BAD_0082 ilvC1; Ketol-acid reductoisomerase 1 K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BAD_0539 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BAD_0743 ilvE; probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BAD_0831 probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BAD_0956 probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BAD_0145 possible TetR-type transcriptional regulator K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:bad00300] D BAD_1416 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BAD_0139 askA; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BAD_0141 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BAD_1297 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BAD_1303 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D BAD_0461 hypothetical protein K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D BAD_0922 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BAD_0238 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BAD_1167 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D BAD_1417 lysA; probable diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D BAD_1085 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BAD_1105 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:bad00220] D BAD_0921 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D BAD_0919 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BAD_0918 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BAD_0943 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_1123 glnA2; glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_0536 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BAD_0535 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BAD_0008 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BAD_0831 probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BAD_0956 probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BAD_0924 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D BAD_1608 acetyltransferase, GNAT family K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D BAD_0923 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D BAD_0925 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D BAD_0922 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:bad00330] D BAD_0608 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D BAD_0243 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D BAD_0901 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:bad00340] D BAD_0795 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D BAD_0794 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D BAD_0788 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D BAD_1124 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D BAD_1125 hisH; imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D BAD_0787 hisF; imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D BAD_1127 hisB; imidazole glycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D BAD_1128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BAD_1129 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:bad00350] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BAD_1128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BAD_0319 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:bad00360] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BAD_1128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bad00400] D BAD_0273 aroG2; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BAD_0274 aroG; phospho-2-keto-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BAD_0705 aroB; bifunctional shikimate kinase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D BAD_0706 aroQ; probable 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D BAD_0685 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D BAD_0704 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D BAD_0789 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BAD_1019 trpD; anthranilate phosphoribosyltransferase 1 K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D BAD_1124 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D BAD_0791 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BAD_0790 trpBC; tryptophan synthase subunit(beta) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D BAD_1452 hypothetical protein K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D BAD_1067 pheA; probable chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D BAD_1066 tyrA; probable prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BAD_1128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:bad00430] D BAD_0688 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BAD_0689 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:bad00450] D BAD_0491 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BAD_0507 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BAD_0635 two-component system sensor histidine kinase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BAD_1170 probable aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BAD_0756 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BAD_0713 NifS-like aminotranferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D BAD_1623 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D BAD_1535 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:bad00460] D BAD_1197 bglX; beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1194 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1598 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1611 beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1610 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1287 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BAD_0156 hypothetical protein K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BAD_0059 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D BAD_1173 L-asparagineamidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D BAD_0902 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:bad00470] D BAD_0496 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BAD_0186 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BAD_1168 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BAD_1103 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BAD_1087 racD; aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D BAD_1167 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D BAD_1417 lysA; probable diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:bad00480] D BAD_1213 possible glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D BAD_1295 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D BAD_0776 icd1; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BAD_0628 gnt; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BAD_0197 putative 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BAD_0631 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:bad00511] D BAD_1582 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BAD_1605 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BAD_1238 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D BAD_1208 probable glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:bad00542] D BAD_0449 rfe; possible undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bad00541] D BAD_0816 ugpA; probable UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BAD_0391 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BAD_0159 gif; probable UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BAD_1509 hypothetical protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BAD_1495 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BAD_1507 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BAD_1508 rmlCD; possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D BAD_0871 bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:bad00550] D BAD_0183 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BAD_0294 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BAD_1100 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BAD_1103 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BAD_1085 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BAD_0186 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BAD_1105 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BAD_1154 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BAD_0825 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BAD_1104 murX; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BAD_1101 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BAD_1107 ftsI; peptidoglycan synthetase; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BAD_0040 pbpA; probable penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D BAD_0407 hypothetical secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BAD_0117 hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D BAD_0118 possible cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:bad00552] D BAD_0825 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BAD_0449 rfe; possible undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:bad00543] D BAD_0449 rfe; possible undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bad00730] D BAD_1146 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D BAD_0090 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D BAD_0513 dxs; probable 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D BAD_0089 thiG; thiazole biosynthesis protein thiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D BAD_1144 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D BAD_1145 bifunctional protein thiEC K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D BAD_1548 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BAD_1078 hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D BAD_0342 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BAD_0874 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:bad00740] D BAD_0418 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BAD_0357 ribF; riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D BAD_1568 possible NADPH-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D BAD_1144 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D BAD_0682 possible pyrophosphate-releasing NTPase in MutT family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:bad00750] D BAD_0597 possible pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D BAD_0264 possible oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D BAD_0091 possible oxidoreductase in aldo-keto reductase family K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D BAD_0383 serC; probable phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BAD_0903 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BAD_1407 pdxS; pyridoxal biosynthesis lyase pdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D BAD_1406 pdxT; glutamine amidotransferase subunit pdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:bad00760] D BAD_0228 hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D BAD_0899 nadD; possible nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D BAD_1346 hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D BAD_0994 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D BAD_1027 CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D BAD_1569 Sir2-type regulatory protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D BAD_0908 ppnK; probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D BAD_0725 pntA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D BAD_0726 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:bad00770] D BAD_0221 ilvB1; acetohydroxy-acid synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BAD_0220 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BAD_0081 ilvC2; Ketol-acid reductoisomerase 2 K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BAD_0082 ilvC1; Ketol-acid reductoisomerase 1 K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BAD_0539 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BAD_0477 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D BAD_0478 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D BAD_0675 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D BAD_0257 protein with similarity to holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D BAD_0743 ilvE; probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:bad00780] D BAD_0935 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BAD_0251 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:bad00785] D BAD_1338 snoP; probable lipoate protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_1344 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:bad00790] D BAD_0410 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D BAD_1548 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BAD_0412 sulD; aldolase-pyrophosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D BAD_0411 folP; dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D BAD_0389 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BAD_1088 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D BAD_0037 pabA; Para-aminobenzoate synthase glutamine amidotransferase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D BAD_0076 pabC; branched-chain amino acid aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] C 00670 One carbon pool by folate [PATH:bad00670] D BAD_0389 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BAD_0169 fhs; formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BAD_0673 folD; bifunctional methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BAD_0902 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BAD_0811 purH; bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BAD_0544 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BAD_0388 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D BAD_0757 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D BAD_0289 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:bad00860] D BAD_0176 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BAD_0416 hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D BAD_0377 probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bad00900] D BAD_0513 dxs; probable 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D BAD_1158 ispC; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D BAD_0269 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D BAD_1616 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D BAD_0669 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D BAD_1157 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D BAD_1081 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D BAD_1013 idsA; probably bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BAD_1154 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D BAD_0829 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:bad00523] D BAD_1509 hypothetical protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BAD_1495 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BAD_1507 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BAD_1508 rmlCD; possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:bad01054] D BAD_1087 racD; aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D BAD_1495 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BAD_1507 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:bad00946] D BAD_1197 bglX; beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1194 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1598 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1611 beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1610 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1287 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BAD_0156 hypothetical protein K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D BAD_1308 putative beta-lactamase (class A) precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:bad00332] D BAD_0243 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D BAD_0901 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:bad00261] D BAD_0139 askA; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BAD_0141 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BAD_1297 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BAD_1303 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:bad00521] D BAD_0365 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BAD_0158 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D BAD_0548 possible inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BAD_1509 hypothetical protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BAD_1495 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BAD_1507 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BAD_1508 rmlCD; possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:bad00525] D BAD_1509 hypothetical protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BAD_1495 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BAD_1507 rmlB1; DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:bad00401] D BAD_1066 tyrA; probable prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BAD_1128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D BAD_0789 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D BAD_0935 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:bad00999] D BAD_0541 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BAD_1197 bglX; beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1194 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1598 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1611 beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1610 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BAD_1287 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BAD_0156 hypothetical protein K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D BAD_0854 putative carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:bad00625] D BAD_0319 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BAD_0768 possible alpha beta hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D BAD_0768 possible alpha beta hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:bad00626] D BAD_0319 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bad03020] D BAD_1319 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BAD_1318 rpoC; DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BAD_0347 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BAD_0540 rpoZ; RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bad03010] D BAD_0674 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BAD_0781 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BAD_0327 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BAD_0697 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BAD_0338 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BAD_1483 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BAD_0531 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BAD_0335 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BAD_0310 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BAD_0320 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BAD_0346 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BAD_0530 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BAD_0345 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BAD_0334 rpsN; 30S ribosomal protein S14-1 K02954 RP-S14; small subunit ribosomal protein S14 D BAD_0259 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BAD_0209 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BAD_0330 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BAD_1481 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BAD_0325 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BAD_0745 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BAD_0248 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BAD_0324 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BAD_0321 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BAD_0322 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BAD_0333 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BAD_0336 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BAD_0285 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BAD_1480 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BAD_0284 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BAD_0247 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BAD_0309 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BAD_0331 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BAD_0340 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BAD_0328 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BAD_0348 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BAD_0337 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BAD_0232 putative 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BAD_1074 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BAD_0240 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BAD_0326 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BAD_0323 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BAD_0332 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BAD_0742 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D BAD_0241 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BAD_0203 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BAD_0329 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BAD_0339 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BAD_0440 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BAD_0224 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BAD_0293 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BAD_1631 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BAD_1075 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BAD_0344 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BAD_r0006 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0012 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0015 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0003 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0009 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0005 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0002 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0011 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0014 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0008 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0001 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0007 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0010 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0013 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:bad00970] D BAD_t0053 alaT; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BAD_t0002 alaV; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BAD_t0001 alaW; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BAD_t0045 alaU; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BAD_t0049 argX; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0030 argU; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0031 argV; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0048 argW; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0025 argT; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0044 asnV; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BAD_t0036 asnT; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BAD_t0037 asnU; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BAD_t0020 aspT; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BAD_t0022 aspT; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BAD_t0041 cysT; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BAD_t0008 glnT; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BAD_t0046 glnU; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BAD_t0007 gluT; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BAD_t0021 gluU; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BAD_t0012 glyU; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0042 glyW; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0026 glyV; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0043 glyV; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0005 glyT; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0029 hisT; tRNA-His K14226 tRNA-His; tRNA His D BAD_t0003 ileU; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BAD_t0024 ileT; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BAD_t0032 leuU; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0035 leuW; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0033 leuV; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0004 leuX; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0010 leuT; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0051 lysU; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BAD_t0006 lysT; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BAD_t0015 metU; tRNA-Met K14230 tRNA-Met; tRNA Met D BAD_t0050 metT; tRNA-Met K14230 tRNA-Met; tRNA Met D BAD_t0023 pheT; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BAD_t0019 proV; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BAD_t0038 proU; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BAD_t0034 proT; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BAD_t0052 serW; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BAD_t0016 serV; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BAD_t0018 serT; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BAD_t0017 serU; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BAD_t0054 thrT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BAD_t0009 thrU; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BAD_t0014 thrV; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BAD_t0011 trpT; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BAD_t0013 tyrT; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BAD_t0027 valX; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_t0039 valX; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_t0028 valU; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_t0040 valU; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_t0047 valT; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_0176 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BAD_1458 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BAD_1457 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BAD_1459 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BAD_0700 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BAD_0576 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BAD_1138 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BAD_0800 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BAD_0369 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BAD_0212 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BAD_1535 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BAD_0544 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BAD_1450 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BAD_0864 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BAD_1187 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BAD_0376 lysS; lysyl-tRNA synthetase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BAD_1418 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BAD_0456 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BAD_0575 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BAD_0928 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BAD_0927 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BAD_0914 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BAD_0027 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bad03060] D BAD_0341 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D BAD_0245 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D BAD_0833 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D BAD_0806 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D BAD_1628 oxaA; membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D BAD_1020 secA1; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BAD_0211 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BAD_0111 ftsY; FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor D BAD_1132 lspA; possible lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system D BAD_0090 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome D BAD_0546 probable Aaa-family ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:bad03018] D BAD_0239 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BAD_0645 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BAD_0260 pnpA; polynucleotide nucleotidyl transferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BAD_0492 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BAD_1454 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D BAD_1296 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D BAD_1547 dnaK; chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK D BAD_0565 groEL; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BAD_0127 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D BAD_1618 pcnA; probable RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:bad03030] D BAD_0985 dnaQ1; putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BAD_1130 dnaE1; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BAD_0137 dnaX; DNA polymerase III subunit gamma_tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BAD_0163 possible DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BAD_0861 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BAD_0002 dnaN; DNA polymerase III, b subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BAD_0116 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BAD_0498 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BAD_1482 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein D BAD_0457 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BAD_0362 rnh; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BAD_0234 ribonuclease K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BAD_0952 ligA; LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bad03410] D BAD_1448 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BAD_0563 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BAD_1321 mutY; probable A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BAD_1058 possible exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BAD_0952 ligA; LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bad03420] D BAD_0644 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BAD_0740 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D BAD_0840 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BAD_0676 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D BAD_0839 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BAD_0693 uvrD1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_1163 probable DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_1305 widely conserved ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_0952 ligA; LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:bad03430] D BAD_0693 uvrD1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_1163 probable DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_1305 widely conserved ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_1217 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BAD_1482 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein D BAD_0457 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BAD_1130 dnaE1; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BAD_0002 dnaN; DNA polymerase III, b subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BAD_0137 dnaX; DNA polymerase III subunit gamma_tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BAD_0861 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BAD_0163 possible DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BAD_0985 dnaQ1; putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BAD_0952 ligA; LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:bad03440] D BAD_1482 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein D BAD_0457 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BAD_0003 recF; recombination protein RecF K03629 recF; DNA replication and repair protein RecF D BAD_1155 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O) D BAD_0138 recR; recombination protein recR K06187 recR; recombination protein RecR D BAD_1024 recA; protein recA (Recombinase A) K03553 recA; recombination protein RecA D BAD_0804 ruvA; holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D BAD_0805 ruvB; holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BAD_0803 ruvC; crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D BAD_0204 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BAD_0181 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BAD_1130 dnaE1; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BAD_0002 dnaN; DNA polymerase III, b subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BAD_0137 dnaX; DNA polymerase III subunit gamma_tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BAD_0861 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BAD_0163 possible DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BAD_0985 dnaQ1; putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BAD_0542 priA; probable primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:bad03250] D BAD_1001 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bad02010] D BAD_1593 msiK; ATP binding protein of ABC transporter for sugars K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BAD_1574 msmE; sugar binding protein of ABC transporter system K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BAD_0425 putative sugar transporter solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BAD_1585 putative solute-binding lipoprotein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BAD_1573 msmF; sugar permease of ABC transporter system K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BAD_1404 malF; ABC-type sugar transport systems, permease components K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BAD_0426 putative binding protein-dependent transporter K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BAD_1586 ABC transporter_ membrane spanning protein[sugar] K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BAD_1572 msmG; sugar permease of ABC transporter system K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BAD_1587 malG4; sugar permeases K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BAD_0427 putative binding protein-dependent transporter K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BAD_1403 multiple sugar-binding transport system permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BAD_1330 ABC transporter K17318 lplA; putative aldouronate transport system substrate-binding protein D BAD_1329 polysaccharide ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D BAD_1328 sugar ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D BAD_0278 pstS; phosphate-binding transport protein of ABC transporter system K02040 pstS; phosphate transport system substrate-binding protein D BAD_0279 pstC; probable phosphate permease protein of ABC transporter system K02037 pstC; phosphate transport system permease protein D BAD_0280 pstA; probable phosphate binding-protein of ABC transporter system K02038 pstA; phosphate transport system permease protein D BAD_0281 pstB; phosphate import ATP-binding protein pstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BAD_0577 similar to glutamine ABC transporter (binding and transport protein) K10036 glnH; glutamine transport system substrate-binding protein D BAD_0578 putative amino acid ABC transporter K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D BAD_0580 gluB; glutamate-binding protein of ABC transporter system K10005 gluB; glutamate transport system substrate-binding protein D BAD_0865 solute binding protein of ABC transporter system K10005 gluB; glutamate transport system substrate-binding protein D BAD_0581 gluC; permease protein of ABC transporter for glutamate K10006 gluC; glutamate transport system permease protein D BAD_0582 gluD; permease protein of ABC transporter for glutamate K10007 gluD; glutamate transport system permease protein D BAD_0579 gluA; ATP-binding protein of ABC transporter for glutamate K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D BAD_1256 putative ABC-type amino acid transport system periplasmic component K16957 tcyK; L-cystine transport system substrate-binding protein D BAD_1258 hypothetical protein K16959 tcyM; L-cystine transport system permease protein D BAD_1260 yckI; similar to glutamine ABC transporter (ATP-binding protein) K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D BAD_0443 solute binding protein of ABC transporter for branched-chain amino acids K01999 livK; branched-chain amino acid transport system substrate-binding protein D BAD_0074 LivF; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BAD_0444 permease of ABC transporter for branched-chain amino acids K01997 livH; branched-chain amino acid transport system permease protein D BAD_0070 branched-chain amino acid ABC-type transport system permease components K01997 livH; branched-chain amino acid transport system permease protein D BAD_0445 permease of ABC transporter for branched-chain amino acids K01998 livM; branched-chain amino acid transport system permease protein D BAD_0071 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D BAD_0446 ATP binding protein of ABC transporter for branched-chain amino acids K01995 livG; branched-chain amino acid transport system ATP-binding protein D BAD_0072 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D BAD_0073 LivF; ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BAD_0447 ATP binding protein of ABC transporter for branched-chain amino acids K01996 livF; branched-chain amino acid transport system ATP-binding protein D BAD_0997 probable TonB-dependent receptor K02073 metQ; D-methionine transport system substrate-binding protein D BAD_0999 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D BAD_0998 D-methionine ABC transporter K02071 metN; D-methionine transport system ATP-binding protein D BAD_1062 dppA2; ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BAD_1172 dppA2; ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BAD_1061 dppB; probable permease protein of ABC-transporter for peptides K15581 oppB; oligopeptide transport system permease protein D BAD_1060 dppC; probable permease protein of ABC-transporter for peptides K15582 oppC; oligopeptide transport system permease protein D BAD_1059 dppD; dipeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BAD_0253 hypothetical integral membrane with weak similarity to proteins in BioY family K03523 bioY; biotin transport system substrate-specific component D BAD_0955 ATP binding protein of ABC transporter K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D BAD_0737 possible ABC transporter permease for cobalt K16785 ecfT; energy-coupling factor transport system permease protein D BAD_0601 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D BAD_0948 possible permease protein of ABC transporter for cobalt K16785 ecfT; energy-coupling factor transport system permease protein D BAD_0465 ftsX; FtsX-like protein in cell division K09811 ftsX; cell division transport system permease protein D BAD_0464 ftsE; FtsE-like ATP binding protein in cell division K09812 ftsE; cell division transport system ATP-binding protein D BAD_1531 probable permease protein of ABC transporter system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_1530 similar to ABC transporter K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_0093 probable permease protein of ABC transporter system K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_1192 ATP-binding protein of ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_1191 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_0094 probable permease protein of ABC transporter system K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_1408 ATP binding protein of ABC transporter K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD C 02060 Phosphotransferase system (PTS) [PATH:bad02060] D BAD_0166 ptsI; PTS system, enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BAD_0366 ptsG; glucose-specific II BC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:bad03070] D BAD_0245 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D BAD_0833 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D BAD_0341 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D BAD_0806 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D BAD_1628 oxaA; membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D BAD_1020 secA1; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BAD_0111 ftsY; FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor D BAD_0211 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:bad02020] D BAD_1548 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BAD_0276 sensor protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BAD_0381 sensor protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BAD_0277 response regulator of two-component system K07776 regX3; two-component system, OmpR family, response regulator RegX3 D BAD_0278 pstS; phosphate-binding transport protein of ABC transporter system K02040 pstS; phosphate transport system substrate-binding protein D BAD_0057 degP; possible DO serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D BAD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BAD_0627 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D BAD_0047 response regulator of two-component system K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D BAD_0129 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D BAD_0130 hypothetical protein K12510 tadB; tight adherence protein B D BAD_0115 glnD; protein-pII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D BAD_0114 glnB; nitrogen regulatory protein N-II K04751 glnB; nitrogen regulatory protein P-II 1 D BAD_0943 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_1123 glnA2; glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_1337 probable transcriptional regulator with cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BAD_0390 ptpA; low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D BAD_1357 hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bad02024] D BAD_0493 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BAD_0789 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BAD_0273 aroG2; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BAD_0274 aroG; phospho-2-keto-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BAD_0187 possible solute binding protein of ABC transporter system K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D BAD_0189 possible permease of ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D BAD_0188 possible permease protein of ABC transporter system K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D BAD_0190 msiK; similar to ATP binding protein of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D BAD_0443 solute binding protein of ABC transporter for branched-chain amino acids K01999 livK; branched-chain amino acid transport system substrate-binding protein D BAD_0074 LivF; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BAD_0444 permease of ABC transporter for branched-chain amino acids K01997 livH; branched-chain amino acid transport system permease protein D BAD_0070 branched-chain amino acid ABC-type transport system permease components K01997 livH; branched-chain amino acid transport system permease protein D BAD_0445 permease of ABC transporter for branched-chain amino acids K01998 livM; branched-chain amino acid transport system permease protein D BAD_0071 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D BAD_0446 ATP binding protein of ABC transporter for branched-chain amino acids K01995 livG; branched-chain amino acid transport system ATP-binding protein D BAD_0072 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D BAD_0073 LivF; ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BAD_0447 ATP binding protein of ABC transporter for branched-chain amino acids K01996 livF; branched-chain amino acid transport system ATP-binding protein D BAD_1311 large protein with C-terminal fibronectin type III domain K20276 bapA; large repetitive protein D BAD_1409 fadD1; probable long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0724 fadD2; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0774 fadD4; probable long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0779 fadD3; possible long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_1337 probable transcriptional regulator with cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BAD_1030 mannan endo-1,4-beta-mannosidase precursor K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D BAD_0418 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BAD_0500 integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BAD_1062 dppA2; ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BAD_1172 dppA2; ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BAD_1061 dppB; probable permease protein of ABC-transporter for peptides K15581 oppB; oligopeptide transport system permease protein D BAD_1060 dppC; probable permease protein of ABC-transporter for peptides K15582 oppC; oligopeptide transport system permease protein D BAD_1059 dppD; dipeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BAD_1094 probable solute-binding protein of ABC transporter for peptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BAD_0479 solute binding protein of ABC transporter systemy for peptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BAD_1449 probable solute binding protein of ABC transporter system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BAD_1093 probable permease of ABC transporter for peptides K02033 ABC.PE.P; peptide/nickel transport system permease protein D BAD_0480 similar to ABC transporter permease protein for peptides K02033 ABC.PE.P; peptide/nickel transport system permease protein D BAD_1092 probable permease of ABC transporter for peptides K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BAD_0481 probable ABC transporter permease protein for peptides K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BAD_1091 dppD; ATP binding protein of ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D BAD_0482 oppD; probable ATP-binding protein of ABC transporter system for peptides K02031 ddpD; peptide/nickel transport system ATP-binding protein D BAD_0483 oppF; probable ATP binding protein of ABC transporter for peptides K02032 ddpF; peptide/nickel transport system ATP-binding protein D BAD_1628 oxaA; membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D BAD_0245 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D BAD_0833 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D BAD_0341 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D BAD_0806 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D BAD_1020 secA1; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BAD_0111 ftsY; FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor D BAD_0211 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D BAD_1011 hrdB; RNA polymerase principal sigma factor; sigma 70 K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D BAD_0645 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bad01501] D BAD_0640 possible B-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D BAD_1062 dppA2; ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BAD_1172 dppA2; ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BAD_1061 dppB; probable permease protein of ABC-transporter for peptides K15581 oppB; oligopeptide transport system permease protein D BAD_1060 dppC; probable permease protein of ABC-transporter for peptides K15582 oppC; oligopeptide transport system permease protein D BAD_1059 dppD; dipeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BAD_1308 putative beta-lactamase (class A) precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6] D BAD_1107 ftsI; peptidoglycan synthetase; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:bad01502] D BAD_0186 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BAD_0496 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BAD_1105 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BAD_1104 murX; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BAD_1101 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bad01503] D BAD_1001 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BAD_0627 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bad01000] C 01001 Protein kinases [BR:bad01001] D BAD_0039 pknA; probable serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BAD_0038 pknB; probable serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BAD_1014 pknA2; probable serine-threonine protein kinase pknA2 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BAD_0143 pknB; serine_threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BAD_1612 widely conserved protein with eukaryotic protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BAD_1310 serine_threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BAD_1358 possible Etk-like tyrosine kinase involved in Eps biosynthesis K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D BAD_0276 sensor protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BAD_0381 sensor protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BAD_0569 sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D BAD_0654 histidine kinase-like protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:bad01009] D BAD_0042 possible phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D BAD_1315 ppp; probable phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D BAD_0545 serB; probable phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:bad01002] D BAD_1132 lspA; possible lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D BAD_0964 pepC1; aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D BAD_0272 pepC2; aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D BAD_0270 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D BAD_0686 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BAD_0213 possible amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BAD_0466 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BAD_0384 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BAD_0385 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BAD_0521 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D BAD_0748 gltB; glutamate synthase [NADPH] large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BAD_0473 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BAD_1077 asnH; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D BAD_0856 choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D BAD_1470 possible sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70] D BAD_0122 sortase K07284 srtA; sortase A [EC:3.4.22.70] D BAD_1551 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BAD_0087 possible sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70] D BAD_0036 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D BAD_0168 pepD; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D BAD_0108 pepDB; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D BAD_0191 hypothetical protein K07052 K07052; CAAX protease family protein D BAD_1295 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D BAD_0458 pepO; belongs to peptidase family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D BAD_0238 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BAD_0459 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D BAD_1089 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D BAD_0409 hypothetical protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BAD_0062 htpX; probable protease htpX homolog K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D BAD_0057 degP; possible DO serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D BAD_0045 probable dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D BAD_1342 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D BAD_0407 hypothetical secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BAD_0587 clp1; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BAD_0588 clpP2; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BAD_1161 hypothetical protein K07177 K07177; Lon-like protease D BAD_1115 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D BAD_1173 L-asparagineamidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D BAD_0267 possible protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:bad01003] D BAD_0751 glgA; possible glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D BAD_0396 glycosyltransferase I K21011 pelF; polysaccharide biosynthesis protein PelF D BAD_0449 rfe; possible undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D BAD_0958 probable glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] C 01005 Lipopolysaccharide biosynthesis proteins [BR:bad01005] D BAD_0449 rfe; possible undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bad01011] D BAD_0183 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BAD_0294 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BAD_1100 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BAD_1103 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BAD_1085 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BAD_0186 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BAD_0496 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BAD_1168 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BAD_1104 murX; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BAD_1101 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BAD_0825 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BAD_1621 conserved hypothetical membrane protein in MviN family K03980 murJ; putative peptidoglycan lipid II flippase D BAD_1107 ftsI; peptidoglycan synthetase; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BAD_0040 pbpA; probable penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D BAD_0407 hypothetical secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BAD_0466 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BAD_0384 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BAD_0385 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BAD_1470 possible sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70] D BAD_0122 sortase K07284 srtA; sortase A [EC:3.4.22.70] D BAD_1551 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BAD_0087 possible sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70] D BAD_0036 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D BAD_0702 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:bad01004] D BAD_0256 fas; probable fatty acid synthase Fas K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D BAD_0935 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BAD_0414 tesB; Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D BAD_1409 fadD1; probable long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0724 fadD2; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0774 fadD4; probable long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0779 fadD3; possible long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_1015 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:bad01008] D BAD_1087 racD; aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:bad01006] D BAD_1013 idsA; probably bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BAD_1154 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BAD_1031 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BAD_0377 probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:bad01007] D BAD_0176 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BAD_1473 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D BAD_0914 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BAD_0027 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BAD_0212 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BAD_1418 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BAD_1535 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BAD_1187 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BAD_1450 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BAD_0864 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BAD_0376 lysS; lysyl-tRNA synthetase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BAD_0576 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BAD_0575 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BAD_1138 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BAD_0369 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BAD_0456 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BAD_0800 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BAD_0700 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BAD_0928 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BAD_0927 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BAD_0244 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BAD_0196 probable aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BAD_0831 probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BAD_0956 probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BAD_1128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BAD_0635 two-component system sensor histidine kinase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BAD_1170 probable aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BAD_0922 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BAD_0743 ilvE; probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BAD_0383 serC; probable phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:bad00194] D BAD_1426 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BAD_1427 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BAD_1428 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BAD_1429 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BAD_1430 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BAD_1431 protein with similarity to ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BAD_1432 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BAD_1433 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bad03000] D BAD_1233 modification methylase Sau3AI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_1283 kpn2kIM; DNA-methyltransferase MKpn2kI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_0424 LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BAD_1326 probable LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BAD_1487 rbsR; ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BAD_1189 LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BAD_1606 LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BAD_0164 rbsR; putative LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BAD_1148 probable LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BAD_0451 probable LacI-type transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D BAD_0970 LacI-type transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D BAD_1565 LacI-type transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D BAD_0075 LacI-type transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D BAD_1453 AsnC-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BAD_0092 possible MarR-type transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D BAD_1544 probable MerR-type-transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D BAD_1143 transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D BAD_0517 fur; probable metal uptake regulator similar to ferric uptake regulator protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D BAD_1337 probable transcriptional regulator with cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BAD_0895 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D BAD_0251 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D BAD_1355 transcriptional regulator K07729 K07729; putative transcriptional regulator D BAD_0367 transcription antiterminator similar to LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D BAD_0655 wblE; WhiB-type transcription regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D BAD_0659 whiB2; WhiB-type transcription regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D BAD_1302 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D BAD_1624 parB; probable chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BAD_0668 possible transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D BAD_0920 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D BAD_0828 hrcA; heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor D BAD_0874 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D BAD_1113 nrdR; transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR D BAD_1110 mraZ; protein mraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:bad03021] D BAD_0347 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BAD_1319 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BAD_1318 rpoC; DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BAD_0540 rpoZ; RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BAD_1011 hrdB; RNA polymerase principal sigma factor; sigma 70 K03086 rpoD; RNA polymerase primary sigma factor D BAD_1084 sigH; RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D BAD_0353 nusA; N utilization substance homolog K02600 nusA; transcription termination/antitermination protein NusA D BAD_0246 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D BAD_0652 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D BAD_1454 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bad03019] D BAD_0239 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BCD_0222 rncS; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BAD_1296 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D BAD_0453 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D BAD_0492 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BAD_0645 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BAD_0260 pnpA; polynucleotide nucleotidyl transferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BAD_1454 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D BAD_1547 dnaK; chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK D BAD_0565 groEL; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BAD_0127 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D BAD_1618 pcnA; probable RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D BAD_0837 hypothetical protein K06958 rapZ; RNase adapter protein RapZ D BAD_0818 probable helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D BAD_1120 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:bad03011] D BAD_0674 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BAD_0781 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BAD_0327 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BAD_0697 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BAD_0338 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BAD_1483 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BAD_0531 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BAD_0335 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BAD_0310 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BAD_0320 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BAD_0346 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BAD_0530 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BAD_0345 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BAD_0334 rpsN; 30S ribosomal protein S14-1 K02954 RP-S14; small subunit ribosomal protein S14 D BAD_0259 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BAD_0209 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BAD_0330 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BAD_1481 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BAD_0325 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BAD_0745 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BAD_0248 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BAD_0324 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BAD_0321 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BAD_0322 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BAD_0333 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BAD_0336 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BAD_1480 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BAD_0284 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BAD_0247 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BAD_0285 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BAD_0309 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BAD_0331 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BAD_0340 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BAD_0328 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BAD_0348 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BAD_0337 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BAD_0232 putative 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BAD_1074 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BAD_0240 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BAD_0326 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BAD_0323 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BAD_0332 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BAD_0241 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BAD_0203 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BAD_0329 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BAD_0339 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BAD_0440 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BAD_0224 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BAD_0293 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BAD_1631 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BAD_1075 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BAD_0344 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BAD_0742 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D BAD_r0001 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0007 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0010 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0013 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0006 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0012 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0015 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0003 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0009 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0005 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0002 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0011 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0014 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0008 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:bad03009] D BCD_0222 rncS; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BAD_0453 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D BAD_0723 era; widely conserved GTP-binding protein K03595 era; GTPase D BAD_0242 obg; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D BAD_0353 nusA; N utilization substance homolog K02600 nusA; transcription termination/antitermination protein NusA D BAD_0246 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D BAD_1615 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BAD_1119 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BAD_0205 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BAD_0718 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BAD_1626 gidB; methyltransferase gidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BAD_1109 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BAD_1538 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BAD_0911 hemolysin-like protein with S4 domain K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BAD_1591 tRNA/rRNA methyltransferase protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BAD_0462 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BAD_0786 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BAD_0474 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D BAD_1131 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BAD_0858 rimI; probable ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D BAD_0207 probable 16S rRNA-processing protein rimM K02860 rimM; 16S rRNA processing protein RimM D BAD_0239 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BAD_0701 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D BAD_0815 engA; GTP-binding protein engA K03977 engA; GTPase D BAD_1118 hflX; GTP-binding protein K03665 hflX; GTPase D BAD_0448 conserved protein in the Sua5/YciO/YrdC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BAD_1002 relA; probable GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BAD_0355 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D BAD_0870 hypothetical protein K09710 ybeB; ribosome-associated protein D BAD_0721 hypothetical protein K07042 ybeY; probable rRNA maturation factor D BAD_0960 hypothetical protein K07574 yhbY; RNA-binding protein D BAD_0609 widely conserved hypothetical GTPase-like protein K06942 ychF; ribosome-binding ATPase D BAD_0225 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:bad03016] D BAD_0176 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BAD_0456 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BAD_1187 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BAD_0864 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BAD_1535 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BAD_1418 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BAD_0376 lysS; lysyl-tRNA synthetase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BAD_0576 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BAD_0700 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BAD_1138 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BAD_0800 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BAD_0369 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BAD_0212 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BAD_1450 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BAD_0575 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BAD_0928 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BAD_0927 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BAD_0914 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BAD_0027 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BAD_0968 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D BAD_0973 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D BAD_0719 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BAD_0753 hypothetical protein K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D BAD_0392 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D BAD_0349 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D BAD_0356 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D BAD_0448 conserved protein in the Sua5/YciO/YrdC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BAD_1031 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BAD_1630 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D BAD_0989 hypothetical protein K03684 rnd; ribonuclease D [EC:3.1.13.5] D BAD_1473 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D BAD_1080 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D BAD_1577 mesJ; possible cytidine and deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D BAD_1032 hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D BAD_0206 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D BAD_1322 yibK; probable RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D BAD_0929 possible rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D BAD_0474 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D BAD_0056 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D BAD_0859 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D BAD_0857 gcp; metalloendopeptidase Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D BAD_0860 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D BAD_0260 pnpA; polynucleotide nucleotidyl transferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bad03012] D BAD_0354 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D BAD_1076 infC; translation initiation factor If-3 K02520 infC; translation initiation factor IF-3 D BAD_0782 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D BAD_0533 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D BAD_0532 fusA1; elongation factor G K02355 fusA; elongation factor G D BAD_0441 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D BAD_0784 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D BAD_0442 possible methylase protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D BAD_0643 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D BAD_0343 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D BAD_0463 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:bad03110] D BAD_1464 clpB; chaperone clpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D BAD_0573 clpC1; probable ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D BAD_0589 clpX; ATP-dependent specificity component of the Clp protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D BAD_1547 dnaK; chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK D BAD_0565 groEL; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BAD_0827 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BAD_1546 grpE; protein grpE (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE D BAD_0292 groES; groES protein K04078 groES; chaperonin GroES D BAD_0409 hypothetical protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BAD_1433 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BAD_1001 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BAD_1349 trxA2; thioredoxin K03671 TXN; thioredoxin D BAD_1421 hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:bad04131] D BAD_1238 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D BAD_1079 gap; glyceraldehyde 3-phosphate dehydrogenase C K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BAD_0378 gpm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_0867 possible phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_0678 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BAD_0202 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:bad04121] C 03051 Proteasome [BR:bad03051] D BAD_0546 probable Aaa-family ATPase K13527 mpa; proteasome-associated ATPase D BAD_0549 hypothetical proteasome-associated protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D BAD_0547 hypothetical proteasome-associated protein K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:bad03032] D BAD_0362 rnh; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BAD_1233 modification methylase Sau3AI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_1283 kpn2kIM; DNA-methyltransferase MKpn2kI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_0552 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D BAD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BAD_0116 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BAD_0498 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BAD_1482 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein D BAD_0457 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BAD_1130 dnaE1; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BAD_0002 dnaN; DNA polymerase III, b subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BAD_0861 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BAD_0163 possible DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BAD_0985 dnaQ1; putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BAD_0137 dnaX; DNA polymerase III subunit gamma_tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BAD_0234 ribonuclease K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BAD_0952 ligA; LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BAD_0006 gyrA; DNA gyrase (topoisomerase II) A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BAD_1007 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BAD_0005 gyrB; DNA gyrase (topoisomerase II) B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BAD_1010 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BAD_0161 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bad03036] D BAD_1233 modification methylase Sau3AI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_1283 kpn2kIM; DNA-methyltransferase MKpn2kI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BCD_0222 rncS; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BAD_0552 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D BAD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BAD_1453 AsnC-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BAD_0464 ftsE; FtsE-like ATP binding protein in cell division K09812 ftsE; cell division transport system ATP-binding protein D BAD_1107 ftsI; peptidoglycan synthetase; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BAD_1029 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BAD_0656 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BAD_1099 ftsQ; cell division protein K03589 ftsQ; cell division protein FtsQ D BAD_1102 fstW; probable FtsW-like protein K03588 ftsW; cell division protein FtsW D BAD_0465 ftsX; FtsX-like protein in cell division K09811 ftsX; cell division transport system permease protein D BAD_1136 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BAD_1135 hypothetical protein K09772 sepF; cell division inhibitor SepF D BAD_1625 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D BAD_1273 hypothetical protein K03496 parA; chromosome partitioning protein D BAD_1072 hypothetical protein K03496 parA; chromosome partitioning protein D BAD_1221 hypothetical protein K03496 parA; chromosome partitioning protein D BAD_1624 parB; probable chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BAD_1626 gidB; methyltransferase gidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BAD_1063 probable integrase K03733 xerC; integrase/recombinase XerC D BAD_1073 xerD; tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD D BAD_0951 mrp; hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D BAD_0836 hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:bad03400] D BAD_0634 putative 6-O-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D BAD_0563 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BAD_1321 mutY; probable A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BAD_1448 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BAD_1071 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BAD_1003 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BAD_1058 possible exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BAD_0952 ligA; LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BAD_0740 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D BAD_0840 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BAD_0676 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D BAD_0839 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BAD_0693 uvrD1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_1163 probable DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_1305 widely conserved ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BAD_1319 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BAD_1318 rpoC; DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BAD_0347 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BAD_0540 rpoZ; RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BAD_0644 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BAD_1217 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BAD_1130 dnaE1; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BAD_0002 dnaN; DNA polymerase III, b subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BAD_0861 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BAD_0163 possible DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BAD_0985 dnaQ1; putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BAD_0137 dnaX; DNA polymerase III subunit gamma_tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BAD_1482 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein D BAD_0457 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BAD_1225 vsr; possible XorII very-short-patch-repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D BAD_1024 recA; protein recA (Recombinase A) K03553 recA; recombination protein RecA D BAD_0804 ruvA; holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D BAD_0805 ruvB; holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BAD_0803 ruvC; crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D BAD_0542 priA; probable primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D BAD_0358 radA; alkylation damage repair protein K04485 radA; DNA repair protein RadA/Sms D BAD_0003 recF; recombination protein RecF K03629 recF; DNA replication and repair protein RecF D BAD_0204 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BAD_0181 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BAD_1155 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O) D BAD_0138 recR; recombination protein recR K06187 recR; recombination protein RecR D BAD_0907 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D BAD_1180 cas1; CRISPR-associated DNA polymerase K15342 cas1; CRISP-associated protein Cas1 D BAD_0006 gyrA; DNA gyrase (topoisomerase II) A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BAD_1007 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BAD_0005 gyrB; DNA gyrase (topoisomerase II) B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BAD_1010 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BAD_0161 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D BAD_0552 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D BAD_0492 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BAD_0303 DNA-damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D BAD_0522 hypothetical protein K03502 umuC; DNA polymerase V D BAD_1115 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D BAD_1023 RecX-like protein K03565 recX; regulatory protein D BAD_1227 putative helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D BAD_1008 lhr; ATP-dependent helicase II K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D BAD_0126 mutT1; probable MutT1 protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] C 03029 Mitochondrial biogenesis [BR:bad03029] D BAD_0354 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D BAD_1076 infC; translation initiation factor If-3 K02520 infC; translation initiation factor IF-3 D BAD_0782 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D BAD_0533 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D BAD_0532 fusA1; elongation factor G K02355 fusA; elongation factor G D BAD_0723 era; widely conserved GTP-binding protein K03595 era; GTPase D BAD_0914 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BAD_0864 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BAD_0576 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BAD_1138 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BAD_1418 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BAD_1458 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BAD_1457 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BAD_1459 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BAD_1482 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein D BAD_0457 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BAD_1547 dnaK; chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK D BAD_1546 grpE; protein grpE (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE D BAD_0565 groEL; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BAD_0292 groES; groES protein K04078 groES; chaperonin GroES D BAD_0827 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BAD_0951 mrp; hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D BAD_1628 oxaA; membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bad02000] D BAD_1531 probable permease protein of ABC transporter system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_1530 similar to ABC transporter K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_0093 probable permease protein of ABC transporter system K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_1192 ATP-binding protein of ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_1191 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_0094 probable permease protein of ABC transporter system K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BAD_1408 ATP binding protein of ABC transporter K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D BAD_0214 ATP binding protein of ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein D BAD_0187 possible solute binding protein of ABC transporter system K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D BAD_0189 possible permease of ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D BAD_0188 possible permease protein of ABC transporter system K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D BAD_0190 msiK; similar to ATP binding protein of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D BAD_1152 possible solute binding protein of ABC transporter K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D BAD_1593 msiK; ATP binding protein of ABC transporter for sugars K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BAD_1566 possible solute binding protein of ABC transporter K25086 musE; maltose transport system substrate-binding protein D BAD_0972 possible solute binding protein of ABC transporter K25086 musE; maltose transport system substrate-binding protein D BAD_1564 permease of ABC transporter possibly for oligosaccharides K25087 musF; maltose transport system permease protein D BAD_1563 permease of ABC transporter possibly for oligosaccharides K25088 musG; maltose transport system permease protein D BAD_1574 msmE; sugar binding protein of ABC transporter system K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BAD_0425 putative sugar transporter solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BAD_1585 putative solute-binding lipoprotein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BAD_1573 msmF; sugar permease of ABC transporter system K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BAD_1404 malF; ABC-type sugar transport systems, permease components K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BAD_0426 putative binding protein-dependent transporter K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BAD_1586 ABC transporter_ membrane spanning protein[sugar] K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BAD_1572 msmG; sugar permease of ABC transporter system K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BAD_1587 malG4; sugar permeases K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BAD_0427 putative binding protein-dependent transporter K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BAD_1403 multiple sugar-binding transport system permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BAD_1330 ABC transporter K17318 lplA; putative aldouronate transport system substrate-binding protein D BAD_1329 polysaccharide ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D BAD_1328 sugar ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D BAD_0624 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D BAD_0625 ATP binding protein of ABC transporter K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D BAD_0476 probable solute binding protein of ABC transporter system for sugars K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BAD_1405 putative periplasmic binding (signal peptide) ABC transporter protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BAD_1290 similar to sugar ABC transporter binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BAD_0153 solute binding protein of ABC transporter system K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BAD_1289 malF; ABC transporter sugar permease K02025 ABC.MS.P; multiple sugar transport system permease protein D BAD_0154 sugar permease of ABC transporter system K02025 ABC.MS.P; multiple sugar transport system permease protein D BAD_1288 similar to sugar ABC transporter K02026 ABC.MS.P1; multiple sugar transport system permease protein D BAD_0155 sugar permease of ABC transporter system K02026 ABC.MS.P1; multiple sugar transport system permease protein D BAD_0278 pstS; phosphate-binding transport protein of ABC transporter system K02040 pstS; phosphate transport system substrate-binding protein D BAD_0279 pstC; probable phosphate permease protein of ABC transporter system K02037 pstC; phosphate transport system permease protein D BAD_0280 pstA; probable phosphate binding-protein of ABC transporter system K02038 pstA; phosphate transport system permease protein D BAD_0281 pstB; phosphate import ATP-binding protein pstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BAD_0577 similar to glutamine ABC transporter (binding and transport protein) K10036 glnH; glutamine transport system substrate-binding protein D BAD_0578 putative amino acid ABC transporter K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D BAD_0580 gluB; glutamate-binding protein of ABC transporter system K10005 gluB; glutamate transport system substrate-binding protein D BAD_0865 solute binding protein of ABC transporter system K10005 gluB; glutamate transport system substrate-binding protein D BAD_0581 gluC; permease protein of ABC transporter for glutamate K10006 gluC; glutamate transport system permease protein D BAD_0582 gluD; permease protein of ABC transporter for glutamate K10007 gluD; glutamate transport system permease protein D BAD_0579 gluA; ATP-binding protein of ABC transporter for glutamate K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D BAD_1256 putative ABC-type amino acid transport system periplasmic component K16957 tcyK; L-cystine transport system substrate-binding protein D BAD_1258 hypothetical protein K16959 tcyM; L-cystine transport system permease protein D BAD_1260 yckI; similar to glutamine ABC transporter (ATP-binding protein) K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D BAD_0443 solute binding protein of ABC transporter for branched-chain amino acids K01999 livK; branched-chain amino acid transport system substrate-binding protein D BAD_0074 LivF; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BAD_0444 permease of ABC transporter for branched-chain amino acids K01997 livH; branched-chain amino acid transport system permease protein D BAD_0070 branched-chain amino acid ABC-type transport system permease components K01997 livH; branched-chain amino acid transport system permease protein D BAD_0445 permease of ABC transporter for branched-chain amino acids K01998 livM; branched-chain amino acid transport system permease protein D BAD_0071 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D BAD_0446 ATP binding protein of ABC transporter for branched-chain amino acids K01995 livG; branched-chain amino acid transport system ATP-binding protein D BAD_0072 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D BAD_0073 LivF; ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BAD_0447 ATP binding protein of ABC transporter for branched-chain amino acids K01996 livF; branched-chain amino acid transport system ATP-binding protein D BAD_0997 probable TonB-dependent receptor K02073 metQ; D-methionine transport system substrate-binding protein D BAD_0999 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D BAD_0998 D-methionine ABC transporter K02071 metN; D-methionine transport system ATP-binding protein D BAD_0470 probable solute binding protein of ABC transporter system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BAD_0469 probable solute binding protein of ABC transporter system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BAD_0506 probable solute-binding protein for glutamate_aspartate ABC transporter system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BAD_0468 probable solute binding protein of ABC transporter system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BAD_0471 permease protein of ABC transporter system K02029 ABC.PA.P; polar amino acid transport system permease protein D BAD_0503 permease protein of ABC transporter system K02029 ABC.PA.P; polar amino acid transport system permease protein D BAD_0504 permease of ABC transporter system for amino acids K02029 ABC.PA.P; polar amino acid transport system permease protein D BAD_0505 gltL; ATP binding protein of ABC transporter for glutamate_aspartate K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D BAD_0472 ATP binding protein of ABC transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D BAD_1062 dppA2; ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BAD_1172 dppA2; ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BAD_1061 dppB; probable permease protein of ABC-transporter for peptides K15581 oppB; oligopeptide transport system permease protein D BAD_1060 dppC; probable permease protein of ABC-transporter for peptides K15582 oppC; oligopeptide transport system permease protein D BAD_1059 dppD; dipeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BAD_1094 probable solute-binding protein of ABC transporter for peptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BAD_0479 solute binding protein of ABC transporter systemy for peptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BAD_1449 probable solute binding protein of ABC transporter system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BAD_1093 probable permease of ABC transporter for peptides K02033 ABC.PE.P; peptide/nickel transport system permease protein D BAD_0480 similar to ABC transporter permease protein for peptides K02033 ABC.PE.P; peptide/nickel transport system permease protein D BAD_1092 probable permease of ABC transporter for peptides K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BAD_0481 probable ABC transporter permease protein for peptides K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BAD_1091 dppD; ATP binding protein of ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D BAD_0482 oppD; probable ATP-binding protein of ABC transporter system for peptides K02031 ddpD; peptide/nickel transport system ATP-binding protein D BAD_0483 oppF; probable ATP binding protein of ABC transporter for peptides K02032 ddpF; peptide/nickel transport system ATP-binding protein D BAD_0752 probable ATP binding protein of ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D BAD_0253 hypothetical integral membrane with weak similarity to proteins in BioY family K03523 bioY; biotin transport system substrate-specific component D BAD_0955 ATP binding protein of ABC transporter K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D BAD_0736 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component D BAD_0737 possible ABC transporter permease for cobalt K16785 ecfT; energy-coupling factor transport system permease protein D BAD_0601 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D BAD_0948 possible permease protein of ABC transporter for cobalt K16785 ecfT; energy-coupling factor transport system permease protein D BAD_0600 cbiO2; ABC-type cobalt transport system, ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BAD_0949 ATP binding protein of ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BAD_0738 ATP binding protein of ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BAD_0961 cbiO; cobalt import ATP-binding/permease protein cbiO K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-] D BAD_0950 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D BAD_0981 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D BAD_0672 possible solute binding protein of ABC transporter system K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D BAD_0282 probable solute binding protein of ABC transporter system K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D BAD_0670 possible permease of ABC transporter system K02075 ABC.ZM.P; zinc/manganese transport system permease protein D BAD_0671 troB; ATP binding protein of ABC transporter K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D BAD_1044 hypothetical protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein D BAD_1043 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein D BAD_1042 probable ATP binding protein of ABC transporter K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D BAD_0465 ftsX; FtsX-like protein in cell division K09811 ftsX; cell division transport system permease protein D BAD_0464 ftsE; FtsE-like ATP binding protein in cell division K09812 ftsE; cell division transport system ATP-binding protein D BAD_1501 possible permease protein of ABC transporter system for export of polysaccharide K01992 ABC-2.P; ABC-2 type transport system permease protein D BAD_1436 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BAD_0488 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BAD_1500 rgpDc; protein possibly involved in ATP-driven polysaccharide export K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BAD_0695 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_0890 ABC-type transporter similar to Vex3 K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_0891 ATP binding protein of ABC transporter similar to Vex1 K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_0604 possible transport protein K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_0085 large transmembrane protein possibly involved in transport K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_0100 possible permease protein of ABC transporter system K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_0101 possible permease protein of ABC transporter system K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_1065 putative ABC transport system integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_1518 probable permease of ABC-type transport systems K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_0770 ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein D BAD_0772 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_0892 ATP binding protein of ABC transporter similar to Vex2 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_0603 possible ATP binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_0931 ABC transporter domain protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_1064 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_0102 ATP binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_0235 ATP-binding protein of ABC transporter system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_0510 ATP binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_0696 ATP binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BAD_0712 probable ATP binding protein of ABC transporter K09013 sufC; Fe-S cluster assembly ATP-binding protein D BAD_1046 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D BAD_0632 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D BAD_0728 putative Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D BAD_1149 cscB; sucrose transport protein K02532 lacY; MFS transporter, OHS family, lactose permease D BAD_1298 probable MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D BAD_0375 AraJ-like protein probably involved in transport of arabinose polymers K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein D BAD_0202 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family D BAD_1070 probable sugar transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D BAD_0166 ptsI; PTS system, enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BAD_0366 ptsG; glucose-specific II BC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D BAD_0812 probable membrane channel protein K06188 aqpZ; aquaporin Z D BAD_1475 glpF; glycerol uptake facilitator-like protein in Mip family K02440 glpF; glycerol uptake facilitator D BAD_0966 possible voltage-gated potassium channel protein K10716 kch; voltage-gated potassium channel D BAD_0113 amtP; possible ammonium ion transporter K03320 amt; ammonium transporter, Amt family D BAD_0558 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D BAD_0559 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D BAD_0009 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D BAD_0866 corA; possible magnesium and cobalt transport protein K03284 corA; magnesium transporter D BAD_0734 crcB2; protein crcB homolog 2 K06199 crcB; fluoride exporter D BAD_0735 crcB3; protein crcB homolog 3 K06199 crcB; fluoride exporter D BAD_0011 hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family D BAD_0722 probable conserved integral membrane protein with CBS domain K03699 tlyC; magnesium and cobalt exporter, CNNM family D BAD_1604 lacS; galactoside symporter K16209 lacS; lactose/raffinose/galactose permease D BAD_1188 lacS; galactoside symporter K16209 lacS; lactose/raffinose/galactose permease D BAD_1419 amino acid permease K16235 mmuP; S-methylmethionine transporter D BAD_0987 hutM; histidine permease K16235 mmuP; S-methylmethionine transporter D BAD_1116 probable cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D BAD_0500 integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BAD_0198 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D BAD_0026 opuE; possible sodium_proline symporter K11928 putP; sodium/proline symporter D BAD_0475 transport proteins K07862 sstT; serine/threonine transporter D BAD_0590 nhaA; probable sodium/proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D BAD_1578 probable NhaP-type Na(+)/H(+) exchanger K24163 nhaK; monovalent cation/hydrogen antiporter D BAD_0112 napA1; Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter D BAD_0909 hypothetical protein K03498 trkH; trk/ktr system potassium uptake protein D BAD_0910 hypothetical protein K03499 trkA; trk/ktr system potassium uptake protein D BAD_0283 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D BAD_0068 probable voltage gated channel protein K03281 clcA; chloride channel protein, CIC family D BAD_1596 hypothetical protein K03281 clcA; chloride channel protein, CIC family D BAD_1395 mntH; H(+)-stimulated manganese uptake system protein K03322 mntH; manganese transport protein D BAD_1621 conserved hypothetical membrane protein in MviN family K03980 murJ; putative peptidoglycan lipid II flippase D BAD_0237 hypothetical protein K13936 mdcF; malonate transporter and related proteins D BAD_0230 hypothetical protein K24180 mleP; malate permease and related proteins D BAD_0937 hypothetical protein K24180 mleP; malate permease and related proteins D BAD_1522 kup2; probable potassium transport system protein kup 2 K03549 kup; KUP system potassium uptake protein D BAD_0265 L-lysine permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D BAD_0638 hypothetical protein K26605 azlC; branched chain amino acid efflux pump D BAD_0639 alzD; branched-chain amino acid permease K26606 azlD; branched chain amino acid efflux pump D BAD_0962 hypothetical protein K23675 fmnP; riboflavin transporter D BAD_1102 fstW; probable FtsW-like protein K03588 ftsW; cell division protein FtsW D BAD_0097 widely conserved hypothetical membrane protein K07243 FTR; high-affinity iron transporter D BAD_0098 hypothetical protein K07230 p19; periplasmic iron binding protein D BAD_1358 possible Etk-like tyrosine kinase involved in Eps biosynthesis K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D BAD_0610 hypothetical protein K04758 feoA; ferrous iron transport protein A D BAD_0611 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D BAD_1562 hypothetical protein K25089 musI; membrane protein C 02044 Secretion system [BR:bad02044] D BAD_0129 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D BAD_0130 hypothetical protein K12510 tadB; tight adherence protein B D BAD_1134 hypothetical protein K02221 yggT; YggT family protein D BAD_0863 hypothetical protein K02237 comEA; competence protein ComEA D BAD_0862 conserved hypothetical transmembrane protein related to ComA K02238 comEC; competence protein ComEC D BAD_1020 secA1; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BAD_0245 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D BAD_0833 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D BAD_0341 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D BAD_0211 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BAD_0111 ftsY; FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor D BAD_0806 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D BAD_1628 oxaA; membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:bad02042] D BAD_0011 hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family D BAD_0722 probable conserved integral membrane protein with CBS domain K03699 tlyC; magnesium and cobalt exporter, CNNM family D BAD_0653 hypothetical protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:bad02022] D BAD_0276 sensor protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BAD_0381 sensor protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BAD_0277 response regulator of two-component system K07776 regX3; two-component system, OmpR family, response regulator RegX3 D BAD_0569 sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D BAD_0568 response regulator of two-component system K02483 K02483; two-component system, OmpR family, response regulator D BAD_0047 response regulator of two-component system K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D BAD_0364 two-component response regulator K02477 K02477; two-component system, LytTR family, response regulator D BAD_0654 histidine kinase-like protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D BAD_0679 hypothetical protein K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:bad02035] D BAD_0129 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bad04812] D BAD_1136 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BAD_1625 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D BAD_1273 hypothetical protein K03496 parA; chromosome partitioning protein D BAD_1072 hypothetical protein K03496 parA; chromosome partitioning protein D BAD_1221 hypothetical protein K03496 parA; chromosome partitioning protein D BAD_1624 parB; probable chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:bad04147] D BAD_0645 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BAD_1079 gap; glyceraldehyde 3-phosphate dehydrogenase C K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BAD_0835 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BAD_0678 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BAD_1001 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BAD_0565 groEL; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BAD_1547 dnaK; chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK D BAD_0231 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BAD_0045 probable dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D BAD_0777 GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BAD_0450 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BAD_0533 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D BAD_0719 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BAD_1117 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BAD_1409 fadD1; probable long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0724 fadD2; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0774 fadD4; probable long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0779 fadD3; possible long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BAD_0342 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BAD_0807 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BAD_0918 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BAD_0919 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BAD_1331 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BAD_0667 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D BAD_0943 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_1123 glnA2; glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BAD_1548 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BAD_1112 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BAD_0811 purH; bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BAD_0945 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BAD_0631 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BAD_0834 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BAD_0378 gpm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BAD_0867 possible phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:bad02048] D BAD_1180 cas1; CRISPR-associated DNA polymerase K15342 cas1; CRISP-associated protein Cas1 D BAD_1179 cas2; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D BAD_1186 cas3; predicted CRISPR-associated helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D BAD_1181 cas4; hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D BAD_1183 CRISPR-associated protein_ CT1133 K19117 csd1; CRISPR-associated protein Csd1 D BAD_1184 CRISPR-associated protein_ CT1133 K19117 csd1; CRISPR-associated protein Csd1 D BAD_1182 CRISPR-associated protein TM1801 K19118 csd2; CRISPR-associated protein Csd2 D BAD_1185 CRISPR-associated protein_ CT1134 K19119 cas5d; CRISPR-associated protein Cas5d D BAD_1233 modification methylase Sau3AI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_1283 kpn2kIM; DNA-methyltransferase MKpn2kI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BAD_0978 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D BAD_1174 hypothetical protein K18923 stbD; antitoxin StbD D BAD_1555 putative death on curing protein K07341 doc; death on curing protein D BAD_1136 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BAD_0176 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:bad04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:bad04090] D BAD_0045 probable dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:bad01504] D BAD_0501 translation elongation factors K18220 tetM; ribosomal protection tetracycline resistance protein D BAD_1308 putative beta-lactamase (class A) precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6] D BAD_0627 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bad00537] D BAD_1548 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bad03100] D BAD_t0053 alaT; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BAD_t0002 alaV; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BAD_t0001 alaW; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BAD_t0045 alaU; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BAD_t0049 argX; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0030 argU; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0031 argV; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0048 argW; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0025 argT; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BAD_t0044 asnV; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BAD_t0036 asnT; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BAD_t0037 asnU; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BAD_t0020 aspT; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BAD_t0022 aspT; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BAD_t0041 cysT; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BAD_t0008 glnT; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BAD_t0046 glnU; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BAD_t0007 gluT; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BAD_t0021 gluU; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BAD_t0012 glyU; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0042 glyW; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0026 glyV; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0043 glyV; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0005 glyT; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BAD_t0029 hisT; tRNA-His K14226 tRNA-His; tRNA His D BAD_t0003 ileU; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BAD_t0024 ileT; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BAD_t0032 leuU; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0035 leuW; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0033 leuV; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0004 leuX; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0010 leuT; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BAD_t0051 lysU; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BAD_t0006 lysT; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BAD_t0015 metU; tRNA-Met K14230 tRNA-Met; tRNA Met D BAD_t0050 metT; tRNA-Met K14230 tRNA-Met; tRNA Met D BAD_t0023 pheT; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BAD_t0019 proV; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BAD_t0038 proU; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BAD_t0034 proT; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BAD_t0052 serW; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BAD_t0016 serV; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BAD_t0018 serT; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BAD_t0017 serU; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BAD_t0054 thrT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BAD_t0009 thrU; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BAD_t0014 thrV; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BAD_t0011 trpT; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BAD_t0013 tyrT; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BAD_t0027 valX; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_t0039 valX; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_t0028 valU; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_t0040 valU; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_t0047 valT; tRNA-Val K14237 tRNA-Val; tRNA Val D BAD_r0006 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0012 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0015 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0003 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0009 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BAD_r0005 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0002 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0011 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0014 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0008 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BAD_r0001 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0007 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0010 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BAD_r0013 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D BAD_1142 hypothetical protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D BAD_1396 dehydrogenase or reductase protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D BAD_0873 possible reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D BAD_1262 hypothetical protein K04940 odh; opine dehydrogenase [EC:1.5.1.28] D BAD_0061 fprA; probable ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D BAD_1215 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D BAD_0991 pflA; pyruvate formate-lyase 1 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D BAD_0431 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D BAD_0792 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D BAD_0096 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D BAD_0758 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D BAD_0429 putative secreted protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D BAD_0083 sialic acid-specific 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D BAD_1513 putative sialic acid-specific acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D BAD_0302 probable esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D BAD_0430 putative esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D BAD_0869 hypothetical protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D BAD_1165 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D BAD_0754 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D BAD_1523 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D BAD_1425 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D BAD_0300 xylanase Y K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156] D BAD_1588 hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225] D BAD_1293 def1; peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88] D BAD_0780 def2; peptide deformylase 2 K01462 PDF; peptide deformylase [EC:3.5.1.88] D BAD_0562 widely conserved MoxR-like protein in magnesium chelatase family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D BAD_1312 moxR; methanol dehydrogenase regulatory protein homolog K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D BAD_0379 myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53] D BAD_0771 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D BAD_0651 fkbP; peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D BAD_1086 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D BAD_1581 calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D BAD_1053 ctpE; probable cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D BAD_0714 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D BAD_1471 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D BAD_1350 hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB D BAD_0553 narrowly conserved hypothetical membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D BAD_0120 hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism C 99999 Others D BAD_1579 possible phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D BAD_0570 cspB; cold shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D BAD_0988 tig; trigger factor K03545 tig; trigger factor D BAD_0467 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D BAD_0595 hypothetical protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D BAD_1228 possible restriction endonuclease K07454 K07454; putative restriction endonuclease D BAD_1462 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D BAD_0596 hypothetical protein K07460 yraN; putative endonuclease D BAD_0594 hypothetical protein K04096 smf; DNA processing protein D BAD_0585 hypothetical protein K07478 ycaJ; putative ATPase D BAD_1377 insertion element IS6110 hypothetical 12.0 kDa protein K07483 K07483; transposase D BAD_1600 transposase K07483 K07483; transposase D BAD_1367 putative transposase K07493 K07493; putative transposase D BAD_1017 transposase K07497 K07497; putative transposase D BAD_1369 ISSdy1_ transposase OrfB K07497 K07497; putative transposase D BAD_1373 tnpB; transposase subunit B K07497 K07497; putative transposase D BAD_1374 tnp; IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D BAD_0084 aroP; aromatic amino acid transport protein AroP K03293 TC.AAT; amino acid transporter, AAT family D BAD_0088 aapA; amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D BAD_0295 possible cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D BAD_0495 yfnA; probable amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D BAD_0528 probable Na+ dependent transporter possibly for ileal bile acids K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D BAD_0398 cotH; spore coat protein H K06330 cotH; spore coat protein H D BAD_1387 cotSA; spore coat protein K06338 cotSA; spore coat protein SA D BAD_1627 jag; hypothetical protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D BAD_1069 widely conserved protein similar to those annotated as GTP-binding elongation factor TypA/BipA K06207 typA; GTP-binding protein D BAD_1324 hypothetical protein K07166 K07166; ACT domain-containing protein D BAD_0720 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D BAD_1511 lytC; 1,4-beta-N-acetylmuramidase K07273 acm; lysozyme C 99994 Others D BAD_0380 response regulator of two-component system K02039 phoU; phosphate transport system protein D BAD_0677 hypothetical protein K05794 terC; tellurite resistance protein TerC D BAD_0894 putative membrane protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D BAD_1558 haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D BAD_0710 possible ABC transporter component K09014 sufB; Fe-S cluster assembly protein SufB D BAD_0711 possible ABC transporter component K09015 sufD; Fe-S cluster assembly protein SufD D BAD_0261 lemA; LemA-like protein K03744 lemA; LemA protein D BAD_0064 pip; hypothetical protein K01421 yhgE; putative membrane protein D BAD_0065 hypothetical protein K01421 yhgE; putative membrane protein D BAD_0105 hypothetical membrane protein with similarity to phage infection protein K01421 yhgE; putative membrane protein D BAD_0106 hypothetical membrane protein with similarity to phage infection protein K01421 yhgE; putative membrane protein C 99997 Function unknown D BAD_0741 hypothetical protein K06889 K06889; uncharacterized protein D BAD_1035 hypothetical protein K06890 K06890; uncharacterized protein D BAD_0917 hypothetical protein K06950 K06950; uncharacterized protein D BAD_1520 hypothetical protein K06950 K06950; uncharacterized protein D BAD_0208 hypothetical protein K06960 K06960; uncharacterized protein D BAD_1098 hypothetical protein K07006 K07006; uncharacterized protein D BAD_0977 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein D BAD_0618 hypothetical protein K07090 K07090; uncharacterized protein D BAD_1549 widely conserved hypothetical transmembrane protein with dub81 K07090 K07090; uncharacterized protein D BAD_1629 hypothetical protein K08998 K08998; uncharacterized protein D BAD_0647 hypothetical protein K09009 K09009; uncharacterized protein D BAD_1000 hypothetical protein K09117 K09117; uncharacterized protein D BAD_0641 hypothetical protein K09118 K09118; uncharacterized protein D BAD_1323 hypothetical protein K09157 K09157; uncharacterized protein D BAD_0974 hypothetical protein K09384 K09384; uncharacterized protein D BAD_1529 hypothetical protein K09955 K09955; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2024