+D GENES KO #

  KEGG Orthology (KO) - Chlamydia pneumoniae CWL029

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cpn00010] D CPn_1025 pgi; Glucose-6-P Isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CPn_0208 pfkA_2; Fructose-6-P Phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPn_0160 pfkA_1; Fructose-6-P Phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CPn_0281 dhnA; Predicted 1,6-Fructose Biphosphate Aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CPn_1063 tpiS; Triosephosphate Isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CPn_0624 gapA; Glyceraldehyde-3-P Dehyrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CPn_0679 pgk; Phosphoglycerate Kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CPn_0863 pgmA; Phosphoglycerate Mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPn_0800 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPn_0097 pyk; Pyruvate Kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPn_0304 pdhA; Pyruvate Dehydrogenase Alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPn_0305 pdhB; Pyruvate Dehydrogenase Beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPn_0306 pdhC; Dihydrolipoamide Acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPn_0851 pckA; Phosphoenolpyruvate Carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cpn00020] D CPn_0378 sucA; Oxoglutarate Dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CPn_0377 sucB_1; Dihydrolipoamide Succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPn_0527 sucB_2; Dihydrolipoamide Succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPn_0974 sucD; Succinyl-CoA Synthetase, Alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CPn_0973 sucC; Succinyl-CoA Synthetase, Beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPn_0789 sdhA; Succinate Dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPn_0790 sdhB; Succinate Dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPn_0788 sdhC; Succinate Dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CPn_1013 fumC; Fumarate Hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CPn_1028 mdhC; Malate Dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPn_0851 pckA; Phosphoenolpyruvate Carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CPn_0304 pdhA; Pyruvate Dehydrogenase Alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPn_0305 pdhB; Pyruvate Dehydrogenase Beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPn_0306 pdhC; Dihydrolipoamide Acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cpn00030] D CPn_1025 pgi; Glucose-6-P Isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CPn_0238 zwf; Glucose-6-P Dehyrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CPn_0239 devB; Glucose-6-P Dehyrogenase (DevB family) K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CPn_0360 gnd; 6-Phosphogluconate Dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CPn_0185 rpe; Ribulose-P Epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CPn_0893 tktB_1; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CPn_0083 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CPn_0141 rpiA; Ribose-5-P Isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CPn_0281 dhnA; Predicted 1,6-Fructose Biphosphate Aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CPn_0208 pfkA_2; Fructose-6-P Phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPn_0160 pfkA_1; Fructose-6-P Phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D CPn_0185 rpe; Ribulose-P Epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cpn00051] D CPn_0056 mrsA; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CPn_0208 pfkA_2; Fructose-6-P Phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPn_0160 pfkA_1; Fructose-6-P Phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CPn_0281 dhnA; Predicted 1,6-Fructose Biphosphate Aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CPn_1063 tpiS; Triosephosphate Isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D CPn_0208 pfkA_2; Fructose-6-P Phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:cpn00500] D CPn_0607 glgC; Glucose-1-P Adenyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CPn_0948 glgA; Glycogen Synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CPn_0475 glgB; Glucan Branching Enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CPn_0307 glgP; Glycogen Phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CPn_0326 malQ; Glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CPn_0388 glgX; Glycogen Hydrolase (debranching) K01214 ISA; isoamylase [EC:3.2.1.68] D CPn_1025 pgi; Glucose-6-P Isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpn00520] D CPn_0968 glmS; Glucosamine-Fructose-6-P Aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPn_0967 pgm; Phosphoglucomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CPn_0749 glmU; UDP-GlcNAc Pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CPn_0856 UDP-Glucose Pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D CPn_0571 murA; UDP-N-Acetylglucosamine Transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CPn_0988 murB; UDP-N-Acetylenolpyruvoylglucosamine Reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CPn_1025 pgi; Glucose-6-P Isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CPn_0056 mrsA; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CPn_0607 glgC; Glucose-1-P Adenyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cpn00620] D CPn_0304 pdhA; Pyruvate Dehydrogenase Alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPn_0305 pdhB; Pyruvate Dehydrogenase Beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPn_0306 pdhC; Dihydrolipoamide Acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPn_0097 pyk; Pyruvate Kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPn_0414 accA; AcCoA Carboxylase/Transferase Alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CPn_0183 accB; Biotin Carboxyl Carrier Protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CPn_0182 accC; Biotin Carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CPn_0058 accD; AcCoA Carboxylase/Transferase Beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CPn_1028 mdhC; Malate Dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPn_1013 fumC; Fumarate Hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CPn_0851 pckA; Phosphoenolpyruvate Carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpn00630] D CPn_1028 mdhC; Malate Dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPn_0521 glyA; Serine Hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPn_0433 gcsH; Glycine Cleavage System H Protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:cpn00640] D CPn_0033 pdhA_pdhB; (pyruvate) Oxoisovalerate Dehydrogenase Alpha/Beta Fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPn_0414 accA; AcCoA Carboxylase/Transferase Alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CPn_0183 accB; Biotin Carboxyl Carrier Protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CPn_0182 accC; Biotin Carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CPn_0058 accD; AcCoA Carboxylase/Transferase Beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CPn_0973 sucC; Succinyl-CoA Synthetase, Beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPn_0974 sucD; Succinyl-CoA Synthetase, Alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D CPn_0789 sdhA; Succinate Dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPn_0790 sdhB; Succinate Dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPn_0788 sdhC; Succinate Dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit C 00660 C5-Branched dibasic acid metabolism D CPn_0973 sucC; Succinyl-CoA Synthetase, Beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPn_0974 sucD; Succinyl-CoA Synthetase, Alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D CPn_1063 tpiS; Triosephosphate Isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cpn00190] D CPn_0789 sdhA; Succinate Dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPn_0790 sdhB; Succinate Dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPn_0788 sdhC; Succinate Dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CPn_0102 cydA; Cytochrome Oxidase Subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CPn_0103 cydB; Cytochrome Oxidase Subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CPn_0088 atpA; ATP Synthase Subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CPn_0089 atpB; ATP Synthase Subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CPn_0090 atpD; ATP Synthase Subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CPn_0086 atpE; ATP Synthase Subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CPn_0091 atpI; ATP Synthase Subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CPn_0092 atpK; ATP Synthase Subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CPn_0918 ppa; Inorganic Pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cpn00680] D CPn_0521 glyA; Serine Hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPn_0800 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPn_1028 mdhC; Malate Dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPn_0281 dhnA; Predicted 1,6-Fructose Biphosphate Aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CPn_0208 pfkA_2; Fructose-6-P Phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPn_0863 pgmA; Phosphoglycerate Mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:cpn00920] D CPn_0920 cysQ; Sulfite Synthesis/biphosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CPn_0548 cysJ; Sulfite Reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cpn00061] D CPn_0414 accA; AcCoA Carboxylase/Transferase Alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CPn_0183 accB; Biotin Carboxyl Carrier Protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CPn_0182 accC; Biotin Carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CPn_0058 accD; AcCoA Carboxylase/Transferase Beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CPn_0295 acpP; Acyl Carrier Protein K02078 acpP; acyl carrier protein D CPn_0297 fabD; Malonyl Acyl Carrier Transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CPn_0298 fabH; Oxoacyl Carrier Protein Synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CPn_0916 fabF; Acyl Carrier Protein Synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CPn_0296 fabG; Oxoacyl (Carrier Protein) Reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPn_0651 fabZ; Myristoyl-Acyl Carrier Dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CPn_0406 fabI; Enoyl-Acyl-Carrier Protein Reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cpn00561] D CPn_0958 plsB; Glycerol-3-P Acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CPn_0962 plsX; FA/Phospholipid Synthesis Protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CPn_0569 plsC; Glycerol-3-P Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CPn_0921 snGlycerol-3-P Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:cpn00564] D CPn_0855 gpdA; Glycerol-3-P Dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CPn_0958 plsB; Glycerol-3-P Acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CPn_0569 plsC; Glycerol-3-P Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CPn_0921 snGlycerol-3-P Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CPn_0567 cdsA; Phosphatidate Cytidylytransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CPn_0983 pssA; Glycerol-Serine Phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CPn_0839 psdD; Phosphatidylserine Decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CPn_0615 pgsA_1; Glycerol-3-P Phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CPn_0947 pgsA_2; Glycerol-3-P Phosphatydyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cpn00230] D CPn_0262 surE; SurE-like Acid Phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CPn_0374 CT056 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CPn_0619 ndk; Nucleoside-2-P Kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPn_0775 yggV; YggV family hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CPn_0171 guaA; GMP Synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CPn_0120 gmk; GMP Kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CPn_0984 nrdA; Ribonucleoside Reductase, Large Chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPn_0985 nrdB; Ribonucleoside Reductase, Small Chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CPn_0894 amn; AMP Nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CPn_0244 adk; Adenylate Kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:cpn00240] D CPn_0608 Uridine 5'-Monophosphate Synthase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CPn_0698 pyrH; UMP Kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CPn_0619 ndk; Nucleoside-2-P Kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPn_0022 maf; Maf-type protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CPn_0236 pyrG; CTP Synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CPn_0568 cmk; CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CPn_0735 Uridine Kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CPn_0262 surE; SurE-like Acid Phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CPn_0392 dcd; dCTP Deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CPn_0984 nrdA; Ribonucleoside Reductase, Large Chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPn_0985 nrdB; Ribonucleoside Reductase, Small Chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CPn_0273 tdk; Thymidylate Kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CPn_0059 dut; dUTP Nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpn00250] D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CPn_0968 glmS; Glucosamine-Fructose-6-P Aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:cpn00260] D CPn_1049 lysC; Aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPn_1048 asd; Aspartate Dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPn_0521 glyA; Serine Hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPn_0863 pgmA; Phosphoglycerate Mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPn_0433 gcsH; Glycine Cleavage System H Protein K02437 gcvH; glycine cleavage system H protein D CPn_0983 pssA; Glycerol-Serine Phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:cpn00270] D CPn_0448 yxjG_2; Hypothetical Protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPn_0374 CT056 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CPn_1049 lysC; Aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPn_1048 asd; Aspartate Dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CPn_1028 mdhC; Malate Dehyrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:cpn00280] D CPn_0919 ldh; Leucine Dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D CPn_0033 pdhA_pdhB; (pyruvate) Oxoisovalerate Dehydrogenase Alpha/Beta Fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpn00290] D CPn_0919 ldh; Leucine Dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:cpn00300] D CPn_1049 lysC; Aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPn_1048 asd; Aspartate Dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPn_1050 dapA; Dihydrodipicolinate Synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CPn_1047 dapB; Dihydrodipicolinate Reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CPn_0519 dapF; Diaminopimelate Epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CPn_0495 aspC; Aspartate Aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CPn_0418 murE; N-Acetylmuramoylalanylglutamyl DAP Ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CPn_0899 murF; Muramoyl-DAP Ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cpn00310] D CPn_0377 sucB_1; Dihydrolipoamide Succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPn_0527 sucB_2; Dihydrolipoamide Succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:cpn00330] D CPn_1032 CT373 hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D CPn_0377 sucB_1; Dihydrolipoamide Succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPn_0527 sucB_2; Dihydrolipoamide Succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpn00400] D CPn_0484 aroG; Deoxyheptonate Aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CPn_1036 aroB; Dehyroquinate Synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CPn_1035 aroE; Shikimate 5-Dehyrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D CPn_1038 aroL; Shikimate Kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71] D CPn_1039 aroA; Phosphoshikimate Vinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CPn_1037 aroC; Chorismate Synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D CPn_0479 phnP; Metal Dependent Hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:cpn00450] D CPn_0448 yxjG_2; Hypothetical Protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPn_0689 yfhO_1; NifS-related Aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CPn_0314 trxB; Thioredoxin Reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CPn_0122 metG; Methionyl-tRNA Synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D CPn_0521 glyA; Serine Hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cpn00470] D CPn_0905 murC_ddlA; Muramate-Ala Ligase/D-Ala-D-Ala Ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CPn_0901 murD; Muramoylalanine-Glutamate Ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CPn_0519 dapF; Diaminopimelate Epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:cpn00480] D CPn_0385 pepA; Leucyl Aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CPn_0360 gnd; 6-Phosphogluconate Dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CPn_0238 zwf; Glucose-6-P Dehyrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:cpn00540] D CPn_0650 lpxA; Acyl-Carrier UDP-GlcNAc O-Acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CPn_0652 lpxC; Myristoyl GlcNac Deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CPn_0302 lpxD; UDP Glucosamine N-Acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CPn_0965 lpxB; Lipid A Disaccharide Synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CPn_0529 ycaH; ATPase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CPn_0526 kpsF; GutQ/KpsF Family Sugar-P Isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CPn_0721 kdsA; KDO Synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CPn_0235 kdsB; deoxyoctulonosic Acid Synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CPn_0154 gseA; KDO Transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CPn_0098 htrB; Acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpn00541] D CPn_0056 mrsA; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CPn_0749 glmU; UDP-GlcNAc Pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cpn00550] D CPn_0571 murA; UDP-N-Acetylglucosamine Transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CPn_0988 murB; UDP-N-Acetylenolpyruvoylglucosamine Reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CPn_0905 murC_ddlA; Muramate-Ala Ligase/D-Ala-D-Ala Ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CPn_0901 murD; Muramoylalanine-Glutamate Ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CPn_0418 murE; N-Acetylmuramoylalanylglutamyl DAP Ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CPn_0899 murF; Muramoyl-DAP Ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CPn_0566 yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CPn_0900 mraY; Muramoyl-Pentapeptide Transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CPn_0904 murG; Peptidoglycan Transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CPn_0419 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CPn_0672 dacF; D-Ala-D-Ala Carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cpn00730] D CPn_0396 yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_0862 yfhO_2; NifS-related Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_1060 tktB_2; Transketolase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CPn_0244 adk; Adenylate Kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cpn00740] D CPn_0872 ribA_ribB; GTP Cyclohydratase/DHBP Synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CPn_0871 ribD; Riboflavin Deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CPn_0873 ribE; Ribityllumazine Synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CPn_0532 ribC; Riboflavin Synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CPn_0320 ribF; FAD Synthase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CPn_0264 ubiD; Phenylacrylate Decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:cpn00760] D CPn_0262 surE; SurE-like Acid Phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:cpn00770] D CPn_0611 yacE; predicted phosphatase/kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CPn_0313 acpS; Acyl-carrier Protein Synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:cpn00780] D CPn_0916 fabF; Acyl Carrier Protein Synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CPn_0296 fabG; Oxoacyl (Carrier Protein) Reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPn_0651 fabZ; Myristoyl-Acyl Carrier Dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CPn_0406 fabI; Enoyl-Acyl-Carrier Protein Reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CPn_0923 bioF_1; Oxononanoate Synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CPn_1043 bioF_2; Oxononanoate Synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CPn_1041 bioA; Adenosylmethionine-8-Amino-7-Oxononanoate Aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CPn_1042 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CPn_1044 bioB; Biotin Synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CPn_0866 birA; Biotin Synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cpn00785] D CPn_0832 lipA; Lipoate Synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CPn_0436 lplA_1; Lipoate Protein Ligase-Like Protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CPn_0618 lplA_2; Lipoate-Protein Ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPn_0304 pdhA; Pyruvate Dehydrogenase Alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPn_0305 pdhB; Pyruvate Dehydrogenase Beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPn_0306 pdhC; Dihydrolipoamide Acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPn_0378 sucA; Oxoglutarate Dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CPn_0377 sucB_1; Dihydrolipoamide Succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPn_0527 sucB_2; Dihydrolipoamide Succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPn_0033 pdhA_pdhB; (pyruvate) Oxoisovalerate Dehydrogenase Alpha/Beta Fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CPn_0433 gcsH; Glycine Cleavage System H Protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cpn00790] D CPn_0757 folX; Dihydroneopterin Aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CPn_0758 folP; Dihydropteroate Synthase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D CPn_0759 folA; Dihydrofolate Reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CPn_0760 CT611 hypothetical protein K22099 folC2; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CPn_0872 ribA_ribB; GTP Cyclohydratase/DHBP Synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] C 00670 One carbon pool by folate [PATH:cpn00670] D CPn_0759 folA; Dihydrofolate Reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CPn_0335 folD; Methylene Tetrahydrofolate Dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CPn_0521 glyA; Serine Hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPn_0649 fmt; Methionyl tRNA Formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CPn_0763 ygfA; Formyltetrahydrofolate Cycloligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cpn00860] D CPn_0560 gltX; Glutamyl-tRNA Synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPn_0714 hemA; Glutamyl tRNA Reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CPn_0138 hemL; Glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CPn_0744 hemB; Porphobilinogen Synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CPn_0052 hemC; Porphobilinogen Deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CPn_0522 CT433 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CPn_0890 hemE; Uroporphyrinogen Decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CPn_0889 hemN_2; Coproporphyrinogen III Oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CPn_0888 hemG; protoporphyrinogen Oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CPn_0603 hemZ; Ferrochetalase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpn00130] D CPn_0265 ubiA; Benzoate Octaphenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CPn_0264 ubiD; Phenylacrylate Decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CPn_0515 ubiE; Ubiquinone Methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CPn_0513 Fe-S oxidoreductase K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D CPn_0911 Fe-S oxidoreductase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cpn00900] D CPn_1060 tktB_2; Transketolase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CPn_0345 yaeM; CT071 hypothetical protein K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CPn_0579 yacM; Sugar Nucleotide Phosphorylase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CPn_0547 ygbB; YgbB family hypothetical protein K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CPn_0373 gcpE; GcpE Protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CPn_1017 lytB; Metalloprotease K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CPn_0264 ubiD; Phenylacrylate Decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CPn_0748 ispA; Geranyl Transtransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CPn_0566 yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CPn_0893 tktB_1; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:cpn00261] D CPn_1049 lysC; Aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPn_1048 asd; Aspartate Dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPn_1050 dapA; Dihydrodipicolinate Synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CPn_1047 dapB; Dihydrodipicolinate Reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CPn_0297 fabD; Malonyl Acyl Carrier Transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CPn_0296 fabG; Oxoacyl (Carrier Protein) Reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPn_0406 fabI; Enoyl-Acyl-Carrier Protein Reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CPn_0295 acpP; Acyl Carrier Protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CPn_1035 aroE; Shikimate 5-Dehyrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D CPn_0328 CT085 hypothetical protein K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D CPn_0264 ubiD; Phenylacrylate Decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cpn03020] D CPn_0081 rpoB; RNA Polymerase Beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CPn_0082 rpoC; RNA Polymerase Beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CPn_0626 rpoA; RNA Polymerase Alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cpn03010] D CPn_0315 rs1; S1 Ribosomal Protein K02945 RP-S1; small subunit ribosomal protein S1 D CPn_0696 rs2; S2 Ribosomal Protein K02967 RP-S2; small subunit ribosomal protein S2 D CPn_0641 rs3; S3 Ribosomal Protein K02982 RP-S3; small subunit ribosomal protein S3 D CPn_0733 rs4; S4 Ribosomal Protein K02986 RP-S4; small subunit ribosomal protein S4 D CPn_0631 rs5; S5 Ribosomal Protein K02988 RP-S5; small subunit ribosomal protein S5 D CPn_0951 rs6; S6 Ribosomal Protein K02990 RP-S6; small subunit ribosomal protein S6 D CPn_0551 rs7; S7 Ribosomal Protein K02992 RP-S7; small subunit ribosomal protein S7 D CPn_0634 rs8; S8 Ribosomal Protein K02994 RP-S8; small subunit ribosomal protein S8 D CPn_0246 rs9; S9 Ribosomal Protein K02996 RP-S9; small subunit ribosomal protein S9 D CPn_0549 rs10; S10 Ribosomal Protein K02946 RP-S10; small subunit ribosomal protein S10 D CPn_0627 rs11; S11 Ribosomal Protein K02948 RP-S11; small subunit ribosomal protein S11 D CPn_0552 rs12; S12 Ribosomal Protein K02950 RP-S12; small subunit ribosomal protein S12 D CPn_0628 rs13; S13 Ribosomal Protein K02952 RP-S13; small subunit ribosomal protein S13 D CPn_0937 rs14; S14 Ribosomal Protein K02954 RP-S14; small subunit ribosomal protein S14 D CPn_1000 rs15; S15 Ribosomal Protein K02956 RP-S15; small subunit ribosomal protein S15 D CPn_0116 rs16; S16 Ribosomal Protein K02959 RP-S16; small subunit ribosomal protein S16 D CPn_0638 rs17; S17 Ribosomal Protein K02961 RP-S17; small subunit ribosomal protein S17 D CPn_0952 rs18; S18 Ribosomal Protein K02963 RP-S18; small subunit ribosomal protein S18 D CPn_0643 rs19; S19 Ribosomal Protein K02965 RP-S19; small subunit ribosomal protein S19 D CPn_0754 rs20; S20 Ribosomal Protein K02968 RP-S20; small subunit ribosomal protein S20 D CPn_0031 rs21; S21 Ribosomal Protein K02970 RP-S21; small subunit ribosomal protein S21 D CPn_0078 rl1; L1 Ribosomal Protein K02863 RP-L1; large subunit ribosomal protein L1 D CPn_0644 rl2; L2 Ribosomal Protein K02886 RP-L2; large subunit ribosomal protein L2 D CPn_0647 rl3; L3 Ribosomal Protein K02906 RP-L3; large subunit ribosomal protein L3 D CPn_0646 rl4; L4 Ribosomal Protein K02926 RP-L4; large subunit ribosomal protein L4 D CPn_0635 rl5; L5 Ribosomal Protein K02931 RP-L5; large subunit ribosomal protein L5 D CPn_0633 rl6; L6 Ribosomal Protein K02933 RP-L6; large subunit ribosomal protein L6 D CPn_0080 rl7; L7/L12 Ribosomal Protein K02935 RP-L7; large subunit ribosomal protein L7/L12 D CPn_0953 rl9; L9 Ribosomal Protein K02939 RP-L9; large subunit ribosomal protein L9 D CPn_0079 rl10; L10 Ribosomal Protein K02864 RP-L10; large subunit ribosomal protein L10 D CPn_0077 rl11; L11 Ribosomal Protein K02867 RP-L11; large subunit ribosomal protein L11 D CPn_0247 rl13; L13 Ribosomal Protein K02871 RP-L13; large subunit ribosomal protein L13 D CPn_0637 rl14; L14 Ribosomal Protein K02874 RP-L14; large subunit ribosomal protein L14 D CPn_0630 rl15; L15 Ribosomal Protein K02876 RP-L15; large subunit ribosomal protein L15 D CPn_0640 rl16; L16 Ribosomal Protein K02878 RP-L16; large subunit ribosomal protein L16 D CPn_0625 rl17; L17 Ribosomal Protein K02879 RP-L17; large subunit ribosomal protein L17 D CPn_0632 rl18; L18 Ribosomal Protein K02881 RP-L18; large subunit ribosomal protein L18 D CPn_0118 rl19; L19 Ribosomal Protein K02884 RP-L19; large subunit ribosomal protein L19 D CPn_0992 rl20; L20 Ribosomal Protein K02887 RP-L20; large subunit ribosomal protein L20 D CPn_0546 rl21; L21 Ribosomal Protein K02888 RP-L21; large subunit ribosomal protein L21 D CPn_0642 rl22; L22 Ribosomal Protein K02890 RP-L22; large subunit ribosomal protein L22 D CPn_0645 rl23; L23 Ribosomal Protein K02892 RP-L23; large subunit ribosomal protein L23 D CPn_0636 rl24; L24 Ribosomal Protein K02895 RP-L24; large subunit ribosomal protein L24 D CPn_0949 ctc; General Stress Protein K02897 RP-L25; large subunit ribosomal protein L25 D CPn_0545 rl27; L27 ribosomal protein K02899 RP-L27; large subunit ribosomal protein L27 D CPn_0327 rl28; L28 Ribosomal Protein K02902 RP-L28; large subunit ribosomal protein L28 D CPn_0639 rl29; L29 Ribosomal Protein K02904 RP-L29; large subunit ribosomal protein L29 D CPn_0112 rl31; L31 Ribosomal Protein K02909 RP-L31; large subunit ribosomal protein L31 D CPn_0961 rl32; L32 Ribosomal Protein K02911 RP-L32; large subunit ribosomal protein L32 D CPn_0250 rl33; L33 Ribosomal Protein K02913 RP-L33; large subunit ribosomal protein L33 D CPn_0935 rl34; L34 Ribosomal Protein K02914 RP-L34; large subunit ribosomal protein L34 D CPn_0991 rl35; L35 Ribosomal Protein K02916 RP-L35; large subunit ribosomal protein L35 D CPn_0936 rl36; L36 Ribosomal Protein K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpn00970] D CPn_t28 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPn_t08 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPn_t30 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPn_t14 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPn_t18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPn_t27 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPn_t04 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CPn_t12 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CPn_t33 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CPn_t34 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CPn_t24 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CPn_t31 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPn_t23 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPn_t32 tRNA-His K14226 tRNA-His; tRNA His D CPn_t07 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CPn_t21 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t37 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t22 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CPn_t01 tRNA-Met K14230 tRNA-Met; tRNA Met D CPn_t05 tRNA-Met K14230 tRNA-Met; tRNA Met D CPn_t06 tRNA-Met K14230 tRNA-Met; tRNA Met D CPn_t16 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CPn_t13 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPn_t29 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPn_t36 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPn_t10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPn_t26 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPn_t02 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPn_t03 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CPn_t09 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CPn_t35 tRNA-Val K14237 tRNA-Val; tRNA Val D CPn_t11 tRNA-Val K14237 tRNA-Val; tRNA Val D CPn_0560 gltX; Glutamyl-tRNA Synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPn_0003 gatA; Glu tRNA Gln Amidotransferae (A subunit) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CPn_0004 gatB; Glu tRNA Gln Amidotransferase B Subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CPn_0002 gatC; Glu-tRNA Gln Amidotransferase (C subunit) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CPn_0892 alaS; Alanyl tRNA Synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPn_0662 aspS; Aspartyl tRNA Synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CPn_0946 glyQ; Glycyl tRNA Synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CPn_0806 thrS; Threonyl tRNA Synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPn_0870 serS; Seryl tRNA Synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPn_0932 cysS; Cysteinyl tRNA Synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPn_0122 metG; Methionyl-tRNA Synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPn_0649 fmt; Methionyl tRNA Formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CPn_0094 valS; Valyl tRNA Synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPn_0153 leuS; Leucyl tRNA Synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPn_0109 ileS; Isoleucyl-tRNA Synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPn_0931 lysS; Lysyl tRNA Synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CPn_0570 argS; Arginyl tRNA Transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPn_0500 proS; Prolyl tRNA Synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPn_0663 hisS; Histidyl tRNA Synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPn_0993 pheS; Phenylalanyl tRNA Synthetase, Alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPn_0594 pheT; phenylalanyl tRNA Synthetase Beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPn_0361 tyrS; tyrosyl tRNA Synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPn_0802 trpS; Tryptophanyl tRNA Synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cpn03060] D CPn_0629 secY; Translocase K03076 secY; preprotein translocase subunit SecY D CPn_0075 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE D CPn_1066 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CPn_0564 secD_secF; SecD/SecF fusion protein K12257 secDF; SecD/SecF fusion protein D CPn_0884 CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D CPn_0310 60IM; 60 kDa Inner Membrane Protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CPn_0841 secA_2; Protein Translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CPn_0115 ffh; Signal Recognition Particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CPn_0972 ftsY; Cell Division Protein FtsY K03110 ftsY; fused signal recognition particle receptor D CPn_0110 lepB; Signal Peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CPn_0535 lspA; Lipoprotein Signal Peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cpn04122] D CPn_0396 yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_0862 yfhO_2; NifS-related Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_0438 ycbF; PP-loop superfamily ATPase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:cpn03018] D CPn_0800 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPn_0999 pnp; Polyribonucleotide Nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CPn_0504 vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1] D CPn_0610 rho; Transcription Termination Factor K03628 rho; transcription termination factor Rho D CPn_0208 pfkA_2; Fructose-6-P Phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPn_0503 dnaK; Heat Shock Protein-70 K04043 dnaK; molecular chaperone DnaK D CPn_0134 groEL_1; Heat Shock Protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPn_0845 pcnB_1; Poly A Polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CPn_0966 pcnB_2; Poly A Polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cpn03030] D CPn_0410 dnaQ_1; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0655 dnaQ_2; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0666 dnaE; DNA Polymerase III Alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPn_0040 dnaX_1; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0272 dnaX_2; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0383 CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPn_0338 dnaN; DNA Polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPn_0616 dnaB; Replicative DNA Helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CPn_0942 dnaG; DNA Primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CPn_0386 ssb; SS DNA Binding Protein K03111 ssb; single-strand DNA-binding protein D CPn_0119 rnhB_1; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CPn_1068 rnhB_2; Ribonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CPn_0149 dnlJ; DNA Ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cpn03410] D CPn_0837 nth; Enodnuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CPn_0773 ung; Uracil DNA Glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CPn_0402 mutY; Adenine Glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CPn_0505 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CPn_0732 nfo; Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CPn_0563 recJ; ssDNA Exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPn_0149 dnlJ; DNA Ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cpn03420] D CPn_0891 mfd; Transcription-Repair Coupling K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CPn_0096 uvrA; Excinuclease ABC Subunit A K03701 uvrA; excinuclease ABC subunit A D CPn_0801 uvrB; Exinuclease ABC Subunit B K03702 uvrB; excinuclease ABC subunit B D CPn_0940 uvrC; Excinuclease ABC, Subunit C K03703 uvrC; excinuclease ABC subunit C D CPn_0772 uvrD; DNA Helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPn_0149 dnlJ; DNA Ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cpn03430] D CPn_0941 mutS; DNA Mismatch Repair K03555 mutS; DNA mismatch repair protein MutS D CPn_0812 mutL; DNA Mismatch Repair K03572 mutL; DNA mismatch repair protein MutL D CPn_0772 uvrD; DNA Helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPn_1062 xseA; Exodoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CPn_0563 recJ; ssDNA Exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPn_0386 ssb; SS DNA Binding Protein K03111 ssb; single-strand DNA-binding protein D CPn_0666 dnaE; DNA Polymerase III Alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPn_0338 dnaN; DNA Polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPn_0040 dnaX_1; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0272 dnaX_2; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0383 CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPn_0410 dnaQ_1; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0655 dnaQ_2; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0149 dnlJ; DNA Ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cpn03440] D CPn_0563 recJ; ssDNA Exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPn_0386 ssb; SS DNA Binding Protein K03111 ssb; single-strand DNA-binding protein D CPn_0589 CT470 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D CPn_0299 recR; Recombination Protein K06187 recR; recombination protein RecR D CPn_0762 recA; RecA recombination protein K03553 recA; recombination protein RecA D CPn_0620 ruvA; Holliday Junction Helicase K03550 ruvA; holliday junction DNA helicase RuvA D CPn_0390 ruvB; Holliday Junction Helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CPn_0621 ruvC; Crossover Junction Endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CPn_0738 recB; Exodeoxyribonuclease V, Beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CPn_0737 recC; Exodeoxyribonuclease V, Gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CPn_0123 recD_1; Exodeoxyribonuclease V (Alpha Subunit) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CPn_0752 recD_2; Exodeoxyribonuclease V, Alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CPn_0666 dnaE; DNA Polymerase III Alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPn_0338 dnaN; DNA Polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPn_0040 dnaX_1; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0272 dnaX_2; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0383 CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPn_0410 dnaQ_1; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0655 dnaQ_2; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0924 priA; Primosomal Protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus D CPn_0957 ide; Insulinase family/Protease III K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cpn02010] D CPn_0482 artJ; Arginine Periplasmic Binding Protein K09996 artJ; arginine transport system substrate-binding protein D CPn_0192 glnP; ABC Amino Acid Transporter Permease K17077 artQ; arginine/lysine/histidine transport system permease protein D CPn_0191 glnQ; ABC Amino Acid Transporter ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CPn_0278 conserved outer membrane lipoprotein protein K02073 metQ; D-methionine transport system substrate-binding protein D CPn_0279 Possible ABC Transporter Permease Protein K02072 metI; D-methionine transport system permease protein D CPn_0280 dppF_1; Dipeptide Transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein D CPn_0195 oppA_1; Oligopeptide Binding Protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPn_0199 oppB_1; Oligopeptide Permease K15581 oppB; oligopeptide transport system permease protein D CPn_0200 oppC_1; Oligopeptide Permease K15582 oppC; oligopeptide transport system permease protein D CPn_0202 oppF; Oligopeptide Transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D CPn_0201 oppD; Oligopeptide Transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CPn_0541 Solute binding protein K09815 znuA; zinc transport system substrate-binding protein D CPn_0543 Metal Transport Protein K09816 znuB; zinc transport system permease protein D CPn_0542 ABC Transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CPn_0349 ytgA; Solute Protein Binding Family K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CPn_0347 ytgC; Integral Membrane Protein K11708 troC; manganese/zinc/iron transport system permease protein D CPn_0346 ytgD; Integral Membrane Protein K11709 troD; manganese/zinc/iron transport system permease protein D CPn_0348 ytgB_1; rRNA methylase K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CPn_0249 CT151 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D CPn_0248 ycfV; ABC Transporter ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CPn_0996 CT839 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D CPn_0995 CT838 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D CPn_0723 yhbG; ABC Transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:cpn02060] D CPn_0038 ptsI; PTS PEP Phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CPn_0037 ptsH; PTS Phosphocarrier Protein Hpr K02784 ptsH; phosphocarrier protein HPr D CPn_0060 ptsN_1; PTS IIA Protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CPn_0061 ptsN_2; PTS IIA Protein + HTH DNA-Binding Domain K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cpn03070] D CPn_0702 yscC; probable Yop proteins translocation protein C/general secretion pathway protein K03219 yscC; type III secretion protein C D CPn_0324 lcrE; Low Calcium Response E K04058 yscW; type III secretion protein W D CPn_0828 yscJ; Yop proteins translocation lipoprotein J K03222 yscJ; type III secretion protein J D CPn_0825 yscR; Yop proteins translocation protein R K03226 yscR; type III secretion protein R D CPn_0824 yscS; Yop proteins translocation protein S K03227 yscS; type III secretion protein S D CPn_0823 yscT; Yop proteins translocation protein T K03228 yscT; type III secretion protein T D CPn_0322 yscU; Yop proteins translocation protein U K03229 yscU; type III secretion protein U D CPn_0323 lcrD; Low Calcium Response D K03230 yscV; type III secretion protein V D CPn_0707 yscN; Yops secretion ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CPn_0826 yscL; Yop proteins translocation protein L K03223 yscL; type III secretion protein L D CPn_0815 gspD; General Secretion Protein D K02453 gspD; general secretion pathway protein D D CPn_0817 gspF; General Secretion Protein F K02455 gspF; general secretion pathway protein F D CPn_0816 gspE; general Secretion Protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CPn_0564 secD_secF; SecD/SecF fusion protein K12257 secDF; SecD/SecF fusion protein D CPn_0075 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE D CPn_1066 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CPn_0629 secY; Translocase K03076 secY; preprotein translocase subunit SecY D CPn_0884 CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D CPn_0310 60IM; 60 kDa Inner Membrane Protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CPn_0841 secA_2; Protein Translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CPn_0972 ftsY; Cell Division Protein FtsY K03110 ftsY; fused signal recognition particle receptor D CPn_0115 ffh; Signal Recognition Particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:cpn02020] D CPn_0979 htrA; DO Serine Protease K04771 degP; serine protease Do [EC:3.4.21.107] D CPn_0362 rpsD; Sigma-28/WhiG Family K02405 fliA; RNA polymerase sigma factor FliA D CPn_0309 dnaA_1; Replication Initiation Factor K02313 dnaA; chromosomal replication initiator protein D CPn_0424 dnaA_2; Replication Initiation Factor K02313 dnaA; chromosomal replication initiator protein D CPn_0665 uhpC; Hexosphosphate Transport K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CPn_0584 atoS; 2-Component Sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CPn_0586 atoC; 2-Component Regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CPn_0771 rpoN; RNA Polymerase Sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CPn_0102 cydA; Cytochrome Oxidase Subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CPn_0103 cydB; Cytochrome Oxidase Subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cpn02024] D CPn_0282 xasA; Amino Acid Transporter K20265 gadC; glutamate:GABA antiporter D CPn_0871 ribD; Riboflavin Deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CPn_0195 oppA_1; Oligopeptide Binding Protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPn_0199 oppB_1; Oligopeptide Permease K15581 oppB; oligopeptide transport system permease protein D CPn_0200 oppC_1; Oligopeptide Permease K15582 oppC; oligopeptide transport system permease protein D CPn_0202 oppF; Oligopeptide Transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D CPn_0201 oppD; Oligopeptide Transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CPn_0196 oppA_2; Oligopeptide Binding Protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPn_0197 oppA_3; Oligopeptide Binding Protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPn_0198 oppA_4; Oligopeptide Binding Protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPn_0599 oppA_5; Oligopeptide Binding Lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPn_0598 oppB_2; Oligopeptide Permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPn_0597 oppC_2; Oligopeptide Permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPn_0682 dppD; ABC ATPase Dipeptide Transport K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPn_0683 dppF_2; ABC ATPase Dipeptide Transport K02032 ddpF; peptide/nickel transport system ATP-binding protein D CPn_0310 60IM; 60 kDa Inner Membrane Protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CPn_0564 secD_secF; SecD/SecF fusion protein K12257 secDF; SecD/SecF fusion protein D CPn_0075 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE D CPn_1066 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CPn_0629 secY; Translocase K03076 secY; preprotein translocase subunit SecY D CPn_0884 CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D CPn_0841 secA_2; Protein Translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CPn_0972 ftsY; Cell Division Protein FtsY K03110 ftsY; fused signal recognition particle receptor D CPn_0115 ffh; Signal Recognition Particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D CPn_0704 fliN; Flagellar Motor Switch Domain/YscQ family K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:cpn02040] D CPn_0860 fliF; Flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D CPn_0859 CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CPn_0858 fliI; Flagellum-specific ATP Synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CPn_0704 fliN; Flagellar Motor Switch Domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D CPn_0363 flhA; Flagellar Secretion Protein K02400 flhA; flagellar biosynthesis protein FlhA D CPn_0756 rpoD; RNA Polymerase Sigma-66 K03086 rpoD; RNA polymerase primary sigma factor D CPn_0771 rpoN; RNA Polymerase Sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CPn_0362 rpsD; Sigma-28/WhiG Family K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CPn_0800 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cpn01501] D CPn_0195 oppA_1; Oligopeptide Binding Protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPn_0199 oppB_1; Oligopeptide Permease K15581 oppB; oligopeptide transport system permease protein D CPn_0200 oppC_1; Oligopeptide Permease K15582 oppC; oligopeptide transport system permease protein D CPn_0202 oppF; Oligopeptide Transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D CPn_0201 oppD; Oligopeptide Transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CPn_0419 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cpn01502] D CPn_0905 murC_ddlA; Muramate-Ala Ligase/D-Ala-D-Ala Ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CPn_0899 murF; Muramoyl-DAP Ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CPn_0900 mraY; Muramoyl-Pentapeptide Transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CPn_0904 murG; Peptidoglycan Transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpn01503] D CPn_0417 amiA; N-Acetylmuramoyl Alanine Amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CPn_0979 htrA; DO Serine Protease K04771 degP; serine protease Do [EC:3.4.21.107] D CPn_0650 lpxA; Acyl-Carrier UDP-GlcNAc O-Acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cpn01000] C 01001 Protein kinases [BR:cpn01001] D CPn_0095 S/T Protein Kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CPn_0670 rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CPn_0584 atoS; 2-Component Sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cpn01009] D CPn_0208 pfkA_2; Fructose-6-P Phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPn_0397 PP2C phosphatase family K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cpn01002] D CPn_0535 lspA; Lipoprotein Signal Peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CPn_0171 guaA; GMP Synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CPn_0968 glmS; Glucosamine-Fructose-6-P Aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPn_0400 CT254 hypothetical protein K07052 K07052; CAAX protease family protein D CPn_0136 pepF; Oligopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D CPn_0957 ide; Insulinase family/Protease III K01408 IDE; insulysin [EC:3.4.24.56] D CPn_0981 Zinc Metalloprotease (insulinase family) K06972 PITRM1; presequence protease [EC:3.4.24.-] D CPn_0385 pepA; Leucyl Aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CPn_1009 map; Methionine Aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CPn_0813 pepP; Aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CPn_0998 ftsH; ATP-dependent zinc protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CPn_0344 yaeL; Metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CPn_0979 htrA; DO Serine Protease K04771 degP; serine protease Do [EC:3.4.21.107] D CPn_0672 dacF; D-Ala-D-Ala Carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CPn_0520 clpP_1; CLP Protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CPn_0847 clpP_2; CLP Protease Subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CPn_0027 lon; Lon ATP-dependent Protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CPn_0110 lepB; Signal Peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CPn_0555 tsp; Tail-Specific Protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:cpn01003] D CPn_0948 glgA; Glycogen Synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpn01005] D CPn_0650 lpxA; Acyl-Carrier UDP-GlcNAc O-Acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CPn_0965 lpxB; Lipid A Disaccharide Synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CPn_0652 lpxC; Myristoyl GlcNac Deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CPn_0302 lpxD; UDP Glucosamine N-Acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CPn_0529 ycaH; ATPase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CPn_0098 htrB; Acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CPn_0154 gseA; KDO Transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CPn_0721 kdsA; KDO Synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CPn_0235 kdsB; deoxyoctulonosic Acid Synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CPn_0526 kpsF; GutQ/KpsF Family Sugar-P Isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpn01011] D CPn_0571 murA; UDP-N-Acetylglucosamine Transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CPn_0988 murB; UDP-N-Acetylenolpyruvoylglucosamine Reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CPn_0905 murC_ddlA; Muramate-Ala Ligase/D-Ala-D-Ala Ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CPn_0901 murD; Muramoylalanine-Glutamate Ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CPn_0418 murE; N-Acetylmuramoylalanylglutamyl DAP Ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CPn_0900 mraY; Muramoyl-Pentapeptide Transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CPn_0904 murG; Peptidoglycan Transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CPn_0730 mviN; Integral Membrane Protein K03980 murJ; putative peptidoglycan lipid II flippase D CPn_0419 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CPn_0672 dacF; D-Ala-D-Ala Carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CPn_0417 amiA; N-Acetylmuramoyl Alanine Amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cpn01004] D CPn_0297 fabD; Malonyl Acyl Carrier Transcyclase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CPn_0298 fabH; Oxoacyl Carrier Protein Synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CPn_0916 fabF; Acyl Carrier Protein Synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CPn_0296 fabG; Oxoacyl (Carrier Protein) Reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPn_0651 fabZ; Myristoyl-Acyl Carrier Dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CPn_0406 fabI; Enoyl-Acyl-Carrier Protein Reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CPn_0958 plsB; Glycerol-3-P Acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CPn_0962 plsX; FA/Phospholipid Synthesis Protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CPn_0569 plsC; Glycerol-3-P Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CPn_0921 snGlycerol-3-P Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cpn01006] D CPn_0748 ispA; Geranyl Transtransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CPn_0566 yaeS; YaeS family hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CPn_0910 miaA; tRNA Pyrophosphate Transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CPn_0265 ubiA; Benzoate Octaphenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:cpn01007] D CPn_0560 gltX; Glutamyl-tRNA Synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPn_0361 tyrS; tyrosyl tRNA Synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPn_0802 trpS; Tryptophanyl tRNA Synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CPn_0932 cysS; Cysteinyl tRNA Synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPn_0570 argS; Arginyl tRNA Transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPn_0122 metG; Methionyl-tRNA Synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPn_0109 ileS; Isoleucyl-tRNA Synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPn_0094 valS; Valyl tRNA Synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPn_0153 leuS; Leucyl tRNA Synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPn_0931 lysS; Lysyl tRNA Synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CPn_0662 aspS; Aspartyl tRNA Synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CPn_0663 hisS; Histidyl tRNA Synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPn_0870 serS; Seryl tRNA Synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPn_0500 proS; Prolyl tRNA Synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPn_0806 thrS; Threonyl tRNA Synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPn_0892 alaS; Alanyl tRNA Synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPn_0993 pheS; Phenylalanyl tRNA Synthetase, Alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPn_0594 pheT; phenylalanyl tRNA Synthetase Beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPn_0740 tyrB; Aromatic AA Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CPn_0495 aspC; Aspartate Aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CPn_0923 bioF_1; Oxononanoate Synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CPn_1043 bioF_2; Oxononanoate Synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CPn_1041 bioA; Adenosylmethionine-8-Amino-7-Oxononanoate Aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CPn_0138 hemL; Glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cpn03000] D CPn_0866 birA; Biotin Synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CPn_0684 parB; Chromosome Partitioning Protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CPn_0193 argR; Arginine Repressor K03402 argR; transcriptional regulator of arginine metabolism D CPn_0501 hrcA; HTH Transcriptional Repressor K03705 hrcA; heat-inducible transcriptional repressor D CPn_0139 yqgE; YqgE hypothetical protein K07735 algH; putative transcriptional regulator D CPn_0534 dksA; DnaK Suppressor K06204 dksA; RNA polymerase-binding transcription factor D CPn_0533 CT406 hypothetical protein K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:cpn03021] D CPn_0626 rpoA; RNA Polymerase Alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CPn_0081 rpoB; RNA Polymerase Beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CPn_0082 rpoC; RNA Polymerase Beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CPn_0756 rpoD; RNA Polymerase Sigma-66 K03086 rpoD; RNA polymerase primary sigma factor D CPn_0771 rpoN; RNA Polymerase Sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CPn_0362 rpsD; Sigma-28/WhiG Family K02405 fliA; RNA polymerase sigma factor FliA D CPn_0316 nusA; N Utilization Protein A K02600 nusA; transcription termination/antitermination protein NusA D CPn_0989 CT832 hypothetical protein K03625 nusB; transcription antitermination protein NusB D CPn_0076 nusG; Transcriptional Antitermination K02601 nusG; transcription termination/antitermination protein NusG D CPn_0793 rbsU; sigma regulatory family protein - PP2C phosphatase (RsbW antagonist) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D CPn_0670 rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CPn_0534 dksA; DnaK Suppressor K06204 dksA; RNA polymerase-binding transcription factor D CPn_0610 rho; Transcription Termination Factor K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cpn03019] D CPn_0959 cafE; Axial Filament Protein K08301 rng; ribonuclease G [EC:3.1.26.-] D CPn_0054 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CPn_0504 vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1] D CPn_0800 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPn_0999 pnp; Polyribonucleotide Nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CPn_0610 rho; Transcription Termination Factor K03628 rho; transcription termination factor Rho D CPn_0208 pfkA_2; Fructose-6-P Phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPn_0503 dnaK; Heat Shock Protein-70 K04043 dnaK; molecular chaperone DnaK D CPn_0134 groEL_1; Heat Shock Protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPn_0845 pcnB_1; Poly A Polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CPn_0966 pcnB_2; Poly A Polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:cpn03011] D CPn_0315 rs1; S1 Ribosomal Protein K02945 RP-S1; small subunit ribosomal protein S1 D CPn_0696 rs2; S2 Ribosomal Protein K02967 RP-S2; small subunit ribosomal protein S2 D CPn_0641 rs3; S3 Ribosomal Protein K02982 RP-S3; small subunit ribosomal protein S3 D CPn_0733 rs4; S4 Ribosomal Protein K02986 RP-S4; small subunit ribosomal protein S4 D CPn_0631 rs5; S5 Ribosomal Protein K02988 RP-S5; small subunit ribosomal protein S5 D CPn_0951 rs6; S6 Ribosomal Protein K02990 RP-S6; small subunit ribosomal protein S6 D CPn_0551 rs7; S7 Ribosomal Protein K02992 RP-S7; small subunit ribosomal protein S7 D CPn_0634 rs8; S8 Ribosomal Protein K02994 RP-S8; small subunit ribosomal protein S8 D CPn_0246 rs9; S9 Ribosomal Protein K02996 RP-S9; small subunit ribosomal protein S9 D CPn_0549 rs10; S10 Ribosomal Protein K02946 RP-S10; small subunit ribosomal protein S10 D CPn_0627 rs11; S11 Ribosomal Protein K02948 RP-S11; small subunit ribosomal protein S11 D CPn_0552 rs12; S12 Ribosomal Protein K02950 RP-S12; small subunit ribosomal protein S12 D CPn_0628 rs13; S13 Ribosomal Protein K02952 RP-S13; small subunit ribosomal protein S13 D CPn_0937 rs14; S14 Ribosomal Protein K02954 RP-S14; small subunit ribosomal protein S14 D CPn_1000 rs15; S15 Ribosomal Protein K02956 RP-S15; small subunit ribosomal protein S15 D CPn_0116 rs16; S16 Ribosomal Protein K02959 RP-S16; small subunit ribosomal protein S16 D CPn_0638 rs17; S17 Ribosomal Protein K02961 RP-S17; small subunit ribosomal protein S17 D CPn_0952 rs18; S18 Ribosomal Protein K02963 RP-S18; small subunit ribosomal protein S18 D CPn_0643 rs19; S19 Ribosomal Protein K02965 RP-S19; small subunit ribosomal protein S19 D CPn_0754 rs20; S20 Ribosomal Protein K02968 RP-S20; small subunit ribosomal protein S20 D CPn_0031 rs21; S21 Ribosomal Protein K02970 RP-S21; small subunit ribosomal protein S21 D CPn_0078 rl1; L1 Ribosomal Protein K02863 RP-L1; large subunit ribosomal protein L1 D CPn_0644 rl2; L2 Ribosomal Protein K02886 RP-L2; large subunit ribosomal protein L2 D CPn_0647 rl3; L3 Ribosomal Protein K02906 RP-L3; large subunit ribosomal protein L3 D CPn_0646 rl4; L4 Ribosomal Protein K02926 RP-L4; large subunit ribosomal protein L4 D CPn_0635 rl5; L5 Ribosomal Protein K02931 RP-L5; large subunit ribosomal protein L5 D CPn_0633 rl6; L6 Ribosomal Protein K02933 RP-L6; large subunit ribosomal protein L6 D CPn_0953 rl9; L9 Ribosomal Protein K02939 RP-L9; large subunit ribosomal protein L9 D CPn_0079 rl10; L10 Ribosomal Protein K02864 RP-L10; large subunit ribosomal protein L10 D CPn_0077 rl11; L11 Ribosomal Protein K02867 RP-L11; large subunit ribosomal protein L11 D CPn_0080 rl7; L7/L12 Ribosomal Protein K02935 RP-L7; large subunit ribosomal protein L7/L12 D CPn_0247 rl13; L13 Ribosomal Protein K02871 RP-L13; large subunit ribosomal protein L13 D CPn_0637 rl14; L14 Ribosomal Protein K02874 RP-L14; large subunit ribosomal protein L14 D CPn_0630 rl15; L15 Ribosomal Protein K02876 RP-L15; large subunit ribosomal protein L15 D CPn_0640 rl16; L16 Ribosomal Protein K02878 RP-L16; large subunit ribosomal protein L16 D CPn_0625 rl17; L17 Ribosomal Protein K02879 RP-L17; large subunit ribosomal protein L17 D CPn_0632 rl18; L18 Ribosomal Protein K02881 RP-L18; large subunit ribosomal protein L18 D CPn_0118 rl19; L19 Ribosomal Protein K02884 RP-L19; large subunit ribosomal protein L19 D CPn_0992 rl20; L20 Ribosomal Protein K02887 RP-L20; large subunit ribosomal protein L20 D CPn_0546 rl21; L21 Ribosomal Protein K02888 RP-L21; large subunit ribosomal protein L21 D CPn_0642 rl22; L22 Ribosomal Protein K02890 RP-L22; large subunit ribosomal protein L22 D CPn_0645 rl23; L23 Ribosomal Protein K02892 RP-L23; large subunit ribosomal protein L23 D CPn_0636 rl24; L24 Ribosomal Protein K02895 RP-L24; large subunit ribosomal protein L24 D CPn_0545 rl27; L27 ribosomal protein K02899 RP-L27; large subunit ribosomal protein L27 D CPn_0327 rl28; L28 Ribosomal Protein K02902 RP-L28; large subunit ribosomal protein L28 D CPn_0639 rl29; L29 Ribosomal Protein K02904 RP-L29; large subunit ribosomal protein L29 D CPn_0112 rl31; L31 Ribosomal Protein K02909 RP-L31; large subunit ribosomal protein L31 D CPn_0961 rl32; L32 Ribosomal Protein K02911 RP-L32; large subunit ribosomal protein L32 D CPn_0250 rl33; L33 Ribosomal Protein K02913 RP-L33; large subunit ribosomal protein L33 D CPn_0935 rl34; L34 Ribosomal Protein K02914 RP-L34; large subunit ribosomal protein L34 D CPn_0991 rl35; L35 Ribosomal Protein K02916 RP-L35; large subunit ribosomal protein L35 D CPn_0936 rl36; L36 Ribosomal Protein K02919 RP-L36; large subunit ribosomal protein L36 D CPn_0949 ctc; General Stress Protein K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:cpn03009] D CPn_0054 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CPn_0544 yhbZ; GTP binding protein K03979 obgE; GTPase [EC:3.6.5.-] D CPn_0534 dksA; DnaK Suppressor K06204 dksA; RNA polymerase-binding transcription factor D CPn_0316 nusA; N Utilization Protein A K02600 nusA; transcription termination/antitermination protein NusA D CPn_0989 CT832 hypothetical protein K03625 nusB; transcription antitermination protein NusB D CPn_0076 nusG; Transcriptional Antitermination K02601 nusG; transcription termination/antitermination protein NusG D CPn_1059 kgsA; Dimethyladenosine Transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CPn_0605 yhhF; predicted Methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CPn_0421 yabC_2; SAM-Dependent Methytransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CPn_0382 yabC_1; SAM-Dependent Methytransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CPn_0531 SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CPn_0864 yjbC; predicted pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CPn_0403 yceC; predicted pseudouridine synthetase family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CPn_0719 sfhB; predicted Pseudouridine Synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CPn_0251 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CPn_0959 cafE; Axial Filament Protein K08301 rng; ribonuclease G [EC:3.1.26.-] D CPn_0237 yggF; YggF Family hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CPn_0844 yphC; GTPase/GTP-binding protein K03977 engA; GTPase D CPn_0478 hflX; GTP Binding Protein K03665 hflX; GTPase D CPn_0270 ywlC; SuA5 Superfamily-related Protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CPn_0318 rbfA; Ribosome Binding Factor A K02834 rbfA; ribosome-binding factor A D CPn_0915 ybeB; IojAP superfamily ortholog K09710 ybeB; ribosome-associated protein D CPn_0509 predicted Metalloenzyme K07042 ybeY; probable rRNA maturation factor D CPn_0321 ychF; GTP Binding Protein K06942 ychF; ribosome-binding ATPase D CPn_0960 CT809 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cpn03016] D CPn_0025 atsA; Sulphohydrolase/Glycosulfatase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CPn_0560 gltX; Glutamyl-tRNA Synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPn_0500 proS; Prolyl tRNA Synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPn_0109 ileS; Isoleucyl-tRNA Synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPn_0153 leuS; Leucyl tRNA Synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPn_0122 metG; Methionyl-tRNA Synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPn_0570 argS; Arginyl tRNA Transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPn_0931 lysS; Lysyl tRNA Synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CPn_0662 aspS; Aspartyl tRNA Synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CPn_0892 alaS; Alanyl tRNA Synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPn_0806 thrS; Threonyl tRNA Synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPn_0870 serS; Seryl tRNA Synthetase-2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPn_0932 cysS; Cysteinyl tRNA Synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPn_0094 valS; Valyl tRNA Synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPn_0663 hisS; Histidyl tRNA Synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPn_0993 pheS; Phenylalanyl tRNA Synthetase, Alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPn_0594 pheT; phenylalanyl tRNA Synthetase Beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPn_0361 tyrS; tyrosyl tRNA Synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPn_0802 trpS; Tryptophanyl tRNA Synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CPn_0488 ycfF; HIT Family Hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CPn_0986 yggH; predicted rRNA Methylase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CPn_0580 truA; Pseudouridylate Synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CPn_0319 truB; tRNA Pseudouridine Synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CPn_0396 yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_0862 yfhO_2; NifS-related Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_0270 ywlC; SuA5 Superfamily-related Protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CPn_0910 miaA; tRNA Pyrophosphate Transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CPn_0838 thdF; Thiophene/Furan Oxidation Protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CPn_0617 gidA; FAD-dependent oxidoreductase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CPn_0920 cysQ; Sulfite Synthesis/biphosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CPn_0934 rnpA; Ribonuclease P Protein Component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CPn_0946 glyQ; Glycyl tRNA Synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CPn_1001 yfhC; cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CPn_0477 yqeV; Hypothetical Protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D CPn_0117 trmD; tRNA (guanine N-1)-Methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CPn_0660 spoU_2; rRNA Methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CPn_0530 spoU_1; rRNA Methylase K03437 spoU; RNA methyltransferase, TrmH family D CPn_0438 ycbF; PP-loop superfamily ATPase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CPn_0219 tgt; Queuine tRNA Ribosyl Transferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CPn_0997 mesJ; PP-loop superfamily ATPase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CPn_0194 gcp_2; O-Sialoglycoprotein Endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CPn_0657 yjeE; YjeE hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CPn_0504 vacB; ribonuclease family K12573 rnr; ribonuclease R [EC:3.1.13.1] D CPn_0999 pnp; Polyribonucleotide Nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cpn03012] D CPn_0317 infB; Initiation Factor-2 K02519 infB; translation initiation factor IF-2 D CPn_0990 infC; Initiation Factor 3 K02520 infC; translation initiation factor IF-3 D CPn_0697 tsf; Elongation Factor TS K02357 tsf; elongation factor Ts D CPn_0074 tufA; Elongation Factor Tu K02358 tuf; elongation factor Tu D CPn_0550 fusA; Elongation Factor G K02355 fusA; elongation factor G D CPn_0113 pfrA; Peptide Chain Releasing Factor K02835 prfA; peptide chain release factor 1 D CPn_0699 rrf; Ribosome Releasing Factor K02838 frr; ribosome recycling factor D CPn_0114 hemK; A/G specific methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CPn_0950 pth; Peptidyl tRNA Hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CPn_0073 infA; Initiation Factor IF-1 K02518 infA; translation initiation factor IF-1 D CPn_0184 efp_1; Elongation Factor P K02356 efp; elongation factor P D CPn_0895 efp_2; Elongation Factor P K02356 efp; elongation factor P C 03110 Chaperones and folding catalysts [BR:cpn03110] D CPn_0144 clpB; Clp Protease ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CPn_0437 clpC; ClpC Protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CPn_0846 clpX; CLP Protease ATPase K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CPn_0503 dnaK; Heat Shock Protein-70 K04043 dnaK; molecular chaperone DnaK D CPn_0134 groEL_1; Heat Shock Protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPn_0032 dnaJ; Heat Shock Protein J K03686 dnaJ; molecular chaperone DnaJ D CPn_0502 grpE; HSP-70 Cofactor K03687 GRPE; molecular chaperone GrpE D CPn_0135 groES; 10 KDa Chaperonin K04078 groES; chaperonin GroES D CPn_0979 htrA; DO Serine Protease K04771 degP; serine protease Do [EC:3.4.21.107] D CPn_0998 ftsH; ATP-dependent zinc protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CPn_0659 trxA; Thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cpn04131] D CPn_0619 ndk; Nucleoside-2-P Kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPn_0624 gapA; Glyceraldehyde-3-P Dehyrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CPn_0863 pgmA; Phosphoglycerate Mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPn_0097 pyk; Pyruvate Kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:cpn03032] D CPn_0416 himD; Integration Host Factor Alpha K05788 ihfB; integration host factor subunit beta D CPn_0309 dnaA_1; Replication Initiation Factor K02313 dnaA; chromosomal replication initiator protein D CPn_0424 dnaA_2; Replication Initiation Factor K02313 dnaA; chromosomal replication initiator protein D CPn_0616 dnaB; Replicative DNA Helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CPn_0942 dnaG; DNA Primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CPn_0386 ssb; SS DNA Binding Protein K03111 ssb; single-strand DNA-binding protein D CPn_0666 dnaE; DNA Polymerase III Alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPn_0338 dnaN; DNA Polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPn_0383 CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPn_0410 dnaQ_1; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0655 dnaQ_2; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0040 dnaX_1; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0272 dnaX_2; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0119 rnhB_1; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CPn_1068 rnhB_2; Ribonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CPn_0149 dnlJ; DNA Ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CPn_0274 gyrA_1; DNA Gyrase Subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPn_0716 gyrA_2; DNA Gyrase Subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPn_0275 gyrB_1; DNA Gyrase Subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPn_0715 gyrB_2; DNA Gyrase Subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPn_0769 topA; DNA Topoisomerase I-Fused to SWI Domain K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cpn03036] D CPn_0054 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CPn_0416 himD; Integration Host Factor Alpha K05788 ihfB; integration host factor subunit beta D CPn_0309 dnaA_1; Replication Initiation Factor K02313 dnaA; chromosomal replication initiator protein D CPn_0424 dnaA_2; Replication Initiation Factor K02313 dnaA; chromosomal replication initiator protein D CPn_0419 pbp3; transglycolase/transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CPn_0880 ftsK; Cell Division Protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CPn_0903 ftsW; Cell Division Protein FtsW K03588 ftsW; cell division protein FtsW D CPn_0417 amiA; N-Acetylmuramoyl Alanine Amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CPn_0850 mreB; Rod Shape Protein-Sugar Kinase K03569 mreB; rod shape-determining protein MreB and related proteins D CPn_0867 rodA; Rod Shape Protein K05837 rodA; rod shape determining protein RodA D CPn_0805 minD; chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D CPn_0684 parB; Chromosome Partitioning Protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CPn_0617 gidA; FAD-dependent oxidoreductase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CPn_0024 xerC; Integrase/recombinase K03733 xerC; integrase/recombinase XerC D CPn_1024 xerD; Integrase/recombinase K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:cpn03400] D CPn_0596 ada; methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CPn_0773 ung; Uracil DNA Glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CPn_0505 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CPn_0402 mutY; Adenine Glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CPn_0837 nth; Enodnuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CPn_0059 dut; dUTP Nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CPn_0732 nfo; Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CPn_0563 recJ; ssDNA Exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPn_0149 dnlJ; DNA Ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CPn_0096 uvrA; Excinuclease ABC Subunit A K03701 uvrA; excinuclease ABC subunit A D CPn_0801 uvrB; Exinuclease ABC Subunit B K03702 uvrB; excinuclease ABC subunit B D CPn_0940 uvrC; Excinuclease ABC, Subunit C K03703 uvrC; excinuclease ABC subunit C D CPn_0772 uvrD; DNA Helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPn_0081 rpoB; RNA Polymerase Beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CPn_0082 rpoC; RNA Polymerase Beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CPn_0626 rpoA; RNA Polymerase Alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CPn_0891 mfd; Transcription-Repair Coupling K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CPn_0941 mutS; DNA Mismatch Repair K03555 mutS; DNA mismatch repair protein MutS D CPn_0812 mutL; DNA Mismatch Repair K03572 mutL; DNA mismatch repair protein MutL D CPn_1062 xseA; Exodoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CPn_0666 dnaE; DNA Polymerase III Alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPn_0338 dnaN; DNA Polymerase III (beta chain) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPn_0383 CT047 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPn_0410 dnaQ_1; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0655 dnaQ_2; DNA Polymerase III Epsilon Chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPn_0040 dnaX_1; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0272 dnaX_2; DNA Polymerase III Gamma and Tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPn_0386 ssb; SS DNA Binding Protein K03111 ssb; single-strand DNA-binding protein D CPn_0738 recB; Exodeoxyribonuclease V, Beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CPn_0737 recC; Exodeoxyribonuclease V, Gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CPn_0123 recD_1; Exodeoxyribonuclease V (Alpha Subunit) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CPn_0752 recD_2; Exodeoxyribonuclease V, Alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CPn_0762 recA; RecA recombination protein K03553 recA; recombination protein RecA D CPn_0620 ruvA; Holliday Junction Helicase K03550 ruvA; holliday junction DNA helicase RuvA D CPn_0390 ruvB; Holliday Junction Helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CPn_0621 ruvC; Crossover Junction Endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CPn_0924 priA; Primosomal Protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CPn_0053 sms; Sms Protein K04485 radA; DNA repair protein RadA/Sms D CPn_0589 CT470 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D CPn_0299 recR; Recombination Protein K06187 recR; recombination protein RecR D CPn_0274 gyrA_1; DNA Gyrase Subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPn_0716 gyrA_2; DNA Gyrase Subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPn_0275 gyrB_1; DNA Gyrase Subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPn_0715 gyrB_2; DNA Gyrase Subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPn_0769 topA; DNA Topoisomerase I-Fused to SWI Domain K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CPn_0416 himD; Integration Host Factor Alpha K05788 ihfB; integration host factor subunit beta D CPn_0984 nrdA; Ribonucleoside Reductase, Large Chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPn_0985 nrdB; Ribonucleoside Reductase, Small Chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cpn03029] D CPn_0317 infB; Initiation Factor-2 K02519 infB; translation initiation factor IF-2 D CPn_0990 infC; Initiation Factor 3 K02520 infC; translation initiation factor IF-3 D CPn_0697 tsf; Elongation Factor TS K02357 tsf; elongation factor Ts D CPn_0074 tufA; Elongation Factor Tu K02358 tuf; elongation factor Tu D CPn_0550 fusA; Elongation Factor G K02355 fusA; elongation factor G D CPn_0361 tyrS; tyrosyl tRNA Synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPn_0153 leuS; Leucyl tRNA Synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPn_0662 aspS; Aspartyl tRNA Synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CPn_0570 argS; Arginyl tRNA Transferase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPn_0003 gatA; Glu tRNA Gln Amidotransferae (A subunit) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CPn_0004 gatB; Glu tRNA Gln Amidotransferase B Subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CPn_0002 gatC; Glu-tRNA Gln Amidotransferase (C subunit) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CPn_0386 ssb; SS DNA Binding Protein K03111 ssb; single-strand DNA-binding protein D CPn_0300 yaeT; Omp85 Analog K07277 SAM50; outer membrane protein insertion porin family D CPn_0503 dnaK; Heat Shock Protein-70 K04043 dnaK; molecular chaperone DnaK D CPn_0502 grpE; HSP-70 Cofactor K03687 GRPE; molecular chaperone GrpE D CPn_0134 groEL_1; Heat Shock Protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPn_0135 groES; 10 KDa Chaperonin K04078 groES; chaperonin GroES D CPn_0032 dnaJ; Heat Shock Protein J K03686 dnaJ; molecular chaperone DnaJ D CPn_0396 yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_0862 yfhO_2; NifS-related Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_0310 60IM; 60 kDa Inner Membrane Protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cpn02000] D CPn_1012 yzeB; ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CPn_0231 tauB; ABC Transport ATPase (Nitrate/Fe) K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CPn_0482 artJ; Arginine Periplasmic Binding Protein K09996 artJ; arginine transport system substrate-binding protein D CPn_0192 glnP; ABC Amino Acid Transporter Permease K17077 artQ; arginine/lysine/histidine transport system permease protein D CPn_0191 glnQ; ABC Amino Acid Transporter ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CPn_0278 conserved outer membrane lipoprotein protein K02073 metQ; D-methionine transport system substrate-binding protein D CPn_0279 Possible ABC Transporter Permease Protein K02072 metI; D-methionine transport system permease protein D CPn_0280 dppF_1; Dipeptide Transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein D CPn_0604 fliY; Glutamine Binding Protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CPn_0195 oppA_1; Oligopeptide Binding Protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPn_0199 oppB_1; Oligopeptide Permease K15581 oppB; oligopeptide transport system permease protein D CPn_0200 oppC_1; Oligopeptide Permease K15582 oppC; oligopeptide transport system permease protein D CPn_0202 oppF; Oligopeptide Transport ATPase K15583 oppD; oligopeptide transport system ATP-binding protein D CPn_0201 oppD; Oligopeptide Transport ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CPn_0196 oppA_2; Oligopeptide Binding Protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPn_0197 oppA_3; Oligopeptide Binding Protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPn_0198 oppA_4; Oligopeptide Binding Protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPn_0599 oppA_5; Oligopeptide Binding Lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPn_0598 oppB_2; Oligopeptide Permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPn_0597 oppC_2; Oligopeptide Permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPn_0682 dppD; ABC ATPase Dipeptide Transport K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPn_0683 dppF_2; ABC ATPase Dipeptide Transport K02032 ddpF; peptide/nickel transport system ATP-binding protein D CPn_0541 Solute binding protein K09815 znuA; zinc transport system substrate-binding protein D CPn_0543 Metal Transport Protein K09816 znuB; zinc transport system permease protein D CPn_0542 ABC Transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CPn_0349 ytgA; Solute Protein Binding Family K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CPn_0347 ytgC; Integral Membrane Protein K11708 troC; manganese/zinc/iron transport system permease protein D CPn_0346 ytgD; Integral Membrane Protein K11709 troD; manganese/zinc/iron transport system permease protein D CPn_0348 ytgB_1; rRNA methylase K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CPn_0996 CT839 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D CPn_0995 CT838 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D CPn_0723 yhbG; ABC Transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CPn_0249 CT151 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D CPn_0248 ycfV; ABC Transporter ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CPn_0691 abcX; ABC Transporter ATPase K09013 sufC; Fe-S cluster assembly ATP-binding protein D CPn_0665 uhpC; Hexosphosphate Transport K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CPn_0038 ptsI; PTS PEP Phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CPn_0037 ptsH; PTS Phosphocarrier Protein Hpr K02784 ptsH; phosphocarrier protein HPr D CPn_0060 ptsN_1; PTS IIA Protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CPn_0061 ptsN_2; PTS IIA Protein + HTH DNA-Binding Domain K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CPn_0286 mgtE; Mg++ Transporter (CBS Domain) K06213 mgtE; magnesium transporter D CPn_0784 exbD; Biopolymer Transport Protein K03559 exbD; biopolymer transport protein ExbD D CPn_0785 exbB; Macromolecule transporter K03562 tolQ; biopolymer transport protein TolQ D CPn_0395 CT257 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CPn_0510 tlyC_2; Hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CPn_0394 tlyC_1; Hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CPn_0695 ompA; Major Outer Membrane Protein K03162 ompA; major outer membrane protein D CPn_0854 porB; Outer Membrane Protein B K08719 K08719; outer membrane protein B D CPn_0300 yaeT; Omp85 Analog K07277 SAM50; outer membrane protein insertion porin family D CPn_1031 arcD; Arginine/Ornithine Antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CPn_0282 xasA; Amino Acid Transporter K20265 gadC; glutamate:GABA antiporter D CPn_0969 tyrP_1; Tyrosine Transport K03834 tyrP; tyrosine-specific transport protein D CPn_0970 tyrP_2; Tyrosine Transport K03834 tyrP; tyrosine-specific transport protein D CPn_1014 ychM; Sulfate Transporter K03321 TC.SULP; sulfate permease, SulP family D CPn_0730 mviN; Integral Membrane Protein K03980 murJ; putative peptidoglycan lipid II flippase D CPn_0217 ypdP; YpdP hypothetical protein K09125 yhhQ; queuosine precursor transporter D CPn_1045 conserved hypothetical bacterial membrane protein K09125 yhhQ; queuosine precursor transporter D CPn_0903 ftsW; Cell Division Protein FtsW K03588 ftsW; cell division protein FtsW D CPn_0781 pal; Peptidoglycan-Associated Lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CPn_0782 tolB; macromolecule transporter K03641 tolB; TolB protein C 02044 Secretion system [BR:cpn02044] D CPn_0815 gspD; General Secretion Protein D K02453 gspD; general secretion pathway protein D D CPn_0816 gspE; general Secretion Protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CPn_0817 gspF; General Secretion Protein F K02455 gspF; general secretion pathway protein F D CPn_0767 CT645 hypothetical protein K02221 yggT; YggT family protein D CPn_0702 yscC; probable Yop proteins translocation protein C/general secretion pathway protein K03219 yscC; type III secretion protein C D CPn_0828 yscJ; Yop proteins translocation lipoprotein J K03222 yscJ; type III secretion protein J D CPn_0826 yscL; Yop proteins translocation protein L K03223 yscL; type III secretion protein L D CPn_0707 yscN; Yops secretion ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CPn_0825 yscR; Yop proteins translocation protein R K03226 yscR; type III secretion protein R D CPn_0824 yscS; Yop proteins translocation protein S K03227 yscS; type III secretion protein S D CPn_0823 yscT; Yop proteins translocation protein T K03228 yscT; type III secretion protein T D CPn_0322 yscU; Yop proteins translocation protein U K03229 yscU; type III secretion protein U D CPn_0323 lcrD; Low Calcium Response D K03230 yscV; type III secretion protein V D CPn_0324 lcrE; Low Calcium Response E K04058 yscW; type III secretion protein W D CPn_0363 flhA; Flagellar Secretion Protein K02400 flhA; flagellar biosynthesis protein FlhA D CPn_0860 fliF; Flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D CPn_0859 CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CPn_0858 fliI; Flagellum-specific ATP Synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CPn_0704 fliN; Flagellar Motor Switch Domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D CPn_0841 secA_2; Protein Translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CPn_0564 secD_secF; SecD/SecF fusion protein K12257 secDF; SecD/SecF fusion protein D CPn_0075 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE D CPn_1066 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CPn_0629 secY; Translocase K03076 secY; preprotein translocase subunit SecY D CPn_0115 ffh; Signal Recognition Particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CPn_0972 ftsY; Cell Division Protein FtsY K03110 ftsY; fused signal recognition particle receptor D CPn_0884 CT741 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D CPn_0310 60IM; 60 kDa Inner Membrane Protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cpn02042] D CPn_0395 CT257 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CPn_0510 tlyC_2; Hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CPn_0394 tlyC_1; Hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:cpn02022] D CPn_0584 atoS; 2-Component Sensor K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CPn_0586 atoC; 2-Component Regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:cpn02035] D CPn_0859 CT718 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CPn_0858 fliI; Flagellum-specific ATP Synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CPn_0363 flhA; Flagellar Secretion Protein K02400 flhA; flagellar biosynthesis protein FlhA D CPn_0704 fliN; Flagellar Motor Switch Domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D CPn_0860 fliF; Flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D CPn_0362 rpsD; Sigma-28/WhiG Family K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cpn04812] D CPn_0850 mreB; Rod Shape Protein-Sugar Kinase K03569 mreB; rod shape-determining protein MreB and related proteins D CPn_0805 minD; chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D CPn_0684 parB; Chromosome Partitioning Protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cpn04147] D CPn_0800 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPn_0624 gapA; Glyceraldehyde-3-P Dehyrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CPn_0679 pgk; Phosphoglycerate Kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CPn_0097 pyk; Pyruvate Kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPn_0778 ahpC; Thio-specific Antioxidant (TSA) Peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CPn_0134 groEL_1; Heat Shock Protein-60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPn_0503 dnaK; Heat Shock Protein-70 K04043 dnaK; molecular chaperone DnaK D CPn_1025 pgi; Glucose-6-P Isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CPn_0074 tufA; Elongation Factor Tu K02358 tuf; elongation factor Tu D CPn_0488 ycfF; HIT Family Hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CPn_0244 adk; Adenylate Kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CPn_0475 glgB; Glucan Branching Enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CPn_0744 hemB; Porphobilinogen Synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CPn_0833 lpdA; Lipoamide Dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPn_0238 zwf; Glucose-6-P Dehyrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CPn_1063 tpiS; Triosephosphate Isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CPn_0863 pgmA; Phosphoglycerate Mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cpn02048] D CPn_0850 mreB; Rod Shape Protein-Sugar Kinase K03569 mreB; rod shape-determining protein MreB and related proteins D CPn_0560 gltX; Glutamyl-tRNA Synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPn_0396 yhfO; NifS-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPn_0862 yfhO_2; NifS-related Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cpn03100] D CPn_t28 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPn_t08 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPn_t30 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPn_t14 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPn_t18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPn_t27 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPn_t04 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CPn_t12 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CPn_t33 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CPn_t34 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CPn_t24 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CPn_t31 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPn_t23 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPn_t32 tRNA-His K14226 tRNA-His; tRNA His D CPn_t07 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CPn_t21 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t37 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t22 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPn_t25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CPn_t01 tRNA-Met K14230 tRNA-Met; tRNA Met D CPn_t05 tRNA-Met K14230 tRNA-Met; tRNA Met D CPn_t06 tRNA-Met K14230 tRNA-Met; tRNA Met D CPn_t16 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CPn_t13 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPn_t29 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPn_t36 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPn_t10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPn_t26 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPn_t02 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPn_t03 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CPn_t09 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CPn_t35 tRNA-Val K14237 tRNA-Val; tRNA Val D CPn_t11 tRNA-Val K14237 tRNA-Val; tRNA Val # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CPn_0761 CT610 hypothetical protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D CPn_0926 Thioredoxin Disulfide Isomerase K01829 dsbH; disulfide reductase [EC:1.8.-.-] D CPn_0653 cutE; Apolipoprotein N-Acetyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CPn_0311 lgt; Prolipoprotein Diacylglycerol Transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CPn_0336 yojL; YojL hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CPn_0101 ybbP; YbbP family hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CPn_0701 karG; Arginine Kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D CPn_0048 yqfF; conserved hypothetical inner membrane protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D CPn_0787 yabD; PHP superfamily (urease/pyrimidinase) hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CPn_1067 def; Polypeptide Deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CPn_0661 mip; FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D CPn_0743 nqrA; Ubiquinone Oxidoreductase, Alpha K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D CPn_0427 nqr2; NADH (Ubiquinone) Dehydrogenase K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D CPn_0428 nqr3; NADH (Ubiquinone) Oxidoreductase, Gamma K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CPn_0429 nqr4; NADH (Ubiquinone) Reductase 4 K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D CPn_0430 nqr5; NADH (Ubiquinone) Reductase 5 K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D CPn_0883 nqr6; Phenolhydrolase/NADH ubiquinone oxidoreductase 6 K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D CPn_0868 zntA; Metal Transport P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CPn_0861 NifU-related protein K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D CPn_0271 Lysophospholipase esterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D CPn_0700 CT676 hypothetical protein K19411 mcsA; protein arginine kinase activator D CPn_0848 tigA; Trigger Factor-peptidyl-prolyl isomerase K03545 tig; trigger factor D CPn_0337 smpB; Small Protein B K03664 smpB; SsrA-binding protein C 99976 Replication and repair D CPn_0982 yigN; YigN family hypothetical protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D CPn_1026 LtuA Protein K08274 ltuA; late transcription unit A protein D CPn_0333 LtuB Protein K08275 ltuB; late transcription unit B protein D CPn_0039 ybaB; YbaB family hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CPn_0351 adt_1; ADP/ATP Translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D CPn_0614 adt_2; ADP/ATP Translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D CPn_0680 ygo4; Phosphate Permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D CPn_0486 hypothetical proline permease K03307 TC.SSS; solute:Na+ symporter, SSS family D CPn_0290 Na-dependent Transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CPn_0528 gltT; Glutamate Symport K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D CPn_0536 dagA_1; D-Ala/Gly Permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CPn_0876 dagA_2; D-Alanine/Glycine Permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CPn_0836 brnQ; Amino Acid (Branched) Transport K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CPn_0207 ybhI; Dicarboxylase Translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CPn_0106 phoH; ATPase K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D CPn_0301 OmpH-Like Outer Membrane Protein K06142 hlpA; outer membrane protein C 99994 Others D CPn_0907 cutA; Periplasmic Divalent Cation Tolerance Protein K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D CPn_0690 ABC Transporter Membrane Protein K09015 sufD; Fe-S cluster assembly protein SufD D CPn_0188 CT132 hypothetical protein K07058 K07058; membrane protein D CPn_0514 CT427 hypothetical protein K07081 K07081; putative periplasmic solute-binding protein D CPn_0411 CT262 hypothetical protein K07083 K07083; putative periplasmic solute-binding protein D CPn_0734 yceA; YceA hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D CPn_1057 CT356 hypothetical protein K06888 K06888; uncharacterized protein D CPn_0152 CT149 hypothetical protein K06889 K06889; uncharacterized protein D CPn_0161 predicted acyltransferase family K06889 K06889; uncharacterized protein D CPn_0971 yccA_2; Transport Permease K06890 K06890; uncharacterized protein D CPn_0720 CT659 hypothetical protein K06960 K06960; uncharacterized protein D CPn_0906 CT763 hypothetical protein K06960 K06960; uncharacterized protein D CPn_0692 ABC Transporter K07033 K07033; uncharacterized protein D CPn_0260 secA_1; Protein Translocase Subunit K07039 K07039; uncharacterized protein D CPn_0578 yaeI; phosphohydrolase K07098 K07098; uncharacterized protein D CPn_0606 CT488 hypothetical protein K07099 K07099; uncharacterized protein D CPn_0878 SET Domain protein K07117 K07117; uncharacterized protein D CPn_0071 CT325 hypothetical protein K07125 K07125; uncharacterized protein D CPn_0525 CT398 hypothetical protein K07164 K07164; uncharacterized protein D CPn_0592 yidD; YidD family K08998 K08998; uncharacterized protein D CPn_0140 yqdE; YqdE hypothetical protein K08999 K08999; uncharacterized protein D CPn_0497 CT388 hypothetical protein K09131 K09131; uncharacterized protein D CPn_0001 CT001 hypothetical protein K09779 K09779; uncharacterized protein D CPn_0681 CT691 hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 5, 2024