+E Transcription factors
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Transcription Factors
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
D K09027 XBP1; X box-binding protein 1
D K04448 JUN; transcription factor AP-1
D K09028 JUNB; transcription factor jun-B
D K04449 JUND; transcription factor jun-D
C AP-1(-like) components, Fos
D K04379 FOS; proto-oncogene protein c-fos
D K09029 FOSB; protein FosB
D K04502 FOSL1; fos-like antigen 1
D K09030 FOSL2; fos-like antigen 2
D K09031 FOSLN; fos-like antigen, invertebrate
D K09032 ATF3, LRF1; activating transcription factor 3
D K21406 ATF3, A3-3; activating transcription factor 3
D K09033 JDP2; jun dimerization protein 2
D K09034 BATF; ATF-like basic leucine zipper transcriptional factor
C AP-1(-like) components, Maf
D K09035 CMAF, MAF; transcription factor Maf
D K07595 MAFA; transcription factor MAFA
D K09036 MAFB; transcription factor MAFB
D K09037 MAFF_G_K; transcription factor MAFF/G/K
D K09038 NRL; neural retina-specific leucine zipper protein
C AP-1(-like) components, NF-E2
D K09039 NFE2; nuclear factor erythroid 2
D K09040 NFE2L1_3; nuclear factor erythroid 2-related factor 1/3
D K05638 NFE2L2, NRF2; nuclear factor erythroid 2-related factor 2
D K09041 NFE2N, CNC; nuclear factor erythroid 2, invertebrate
D K09042 BACH; transcription regulator BACH
C AP-1(-like) components, Fungal regulators
D K09464 GCN4; general control protein GCN4
D K09043 YAP; AP-1-like transcription factor
C AP-1(-like) components, CRE-BP/ATF
D K04450 ATF2, CREBP1; cyclic AMP-dependent transcription factor ATF-2
D K09032 ATF3, LRF1; activating transcription factor 3
D K04374 ATF4, CREB2; cyclic AMP-dependent transcription factor ATF-4
D K09044 ATF5; activating transcription factor 5
D K09045 ATF7, ATFA; activating transcription factor 7
D K09047 CREB5, CREBPA; cyclic AMP-responsive element-binding protein 5
D K21548 CREBZF; ATF/CREB family transcription factor
D K09051 SKO1, ATF1, PCR1; ATF/CREB family transcription factor
C CREB
D K05870 CREB1; cyclic AMP-responsive element-binding protein 1
D K09048 CREB3; cyclic AMP-responsive element-binding protein 3
D K09049 ATF6B, CREBL1; cyclic AMP-dependent transcription factor ATF-6 beta
D K09052 CREM; cAMP response element modulator
D K09053 ATF1; activating transcription factor 1
D K09054 ATF6A; cyclic AMP-dependent transcription factor ATF-6 alpha
D K16230 HAC1; transcriptional activator HAC1
C C/EBP-like factors
D K09055 CEBPA; CCAAT/enhancer binding protein (C/EBP), alpha
D K10048 CEBPB; CCAAT/enhancer binding protein (C/EBP), beta
D K10049 CEBPG; CCAAT/enhancer binding protein (C/EBP), gamma
D K10050 CEBPD; CCAAT/enhancer binding protein (C/EBP), delta
D K10051 CEBPE; CCAAT/enhancer binding protein (C/EBP), epsilon
D K10052 CEBPN; CCAAT/enhancer binding protein (C/EBP), invertebrate
D K23479 CCAAT/enhancer binding protein (C/EBP), other
D K04452 DDIT3, GADD153; DNA damage-inducible transcript 3
C bZIP/PAR
D K09056 DBP; albumin D box-binding protein
D K09057 HLF; hepatic leukemia factor
D K09058 TEF; thyrotrophic embryonic factor
D K09059 NFIL3, E4BP4; nuclear factor, interleukin 3 regulated
C Plant bZIP factors
D K14432 ABF; ABA responsive element binding factor
D K14431 TGA; transcription factor TGA
D K09060 GBF; plant G-box-binding factor
D K16241 HY5; transcription factor HY5
D K20557 VIP1; transcription factor VIP1
D K25786 BZIP1S; bZIP transcription factor 1/2/11/44/53
D K25784 BZIP9_10_25_63; bZIP transcription factor 9/10/25/63
D K25783 BZIP17_28_49; bZIP transcription factor 17/28/49
D K25785 BZIP19_23_24; bZIP transcription factor 19/23/24
C ZIP only
D K09061 GCF, C2orf3; GC-rich sequence DNA-binding factor
D K12114 VRI; vrille
D K09062 GT; protein giant
D K27348 CES-2; transcription factor Ces-2
D K06649 SWI4; regulatory protein SWI4
D K06648 SWI6; regulatory protein SWI6
D K21642 OPI1; transcriptional repressor OPI1
D K21646 GCR1; glycolytic genes transcriptional activator GCR1
D K21671 GCR2; glycolytic genes transcriptional activator GCR2
D K21451 XLNR; xylanolytic transcriptional activator XlnR
D K21452 MBZ1; bZIP-type transcription factor MBZ1
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
D K09063 TCF3, E2A; transcription factor E2-alpha
D K15603 TCF4_12; transcription factor 4/12
C Myogenic transcription factors
D K09064 MYOD1, MYF3; myogenic factor 3
D K18483 MYF4, MYOG; myogenic factor 4 (myogenin)
D K18484 MYF5; myogenic factor 5
D K18485 MYF6, MRF4; myogenic factor 6
D K09066 FIGLA; factor in the germline alpha
C Achaete-Scute
D K09067 ASCL; achaete-scute complex protein
C Tal/Twist/Atonal/Hen, Lymphoid factors
D K09068 TAL; T-cell acute lymphocytic leukemia protein
D K15604 LYL1; protein lyl-1
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
D K09069 TWIST; twist
D K09070 TCF15, PARAXIS; transcription factor 15
D K09071 HAND1; heart-and neural crest derivatives-expressed protein 1
D K18486 HAND2; heart-and neural crest derivatives-expressed protein 2
D K09072 MSC; musculin (activated B-cell factor-1)
D K09073 PTF1A; pancreas-specific transcription factor 1a
D K22400 FERD3L; Fer3-like protein
D K09074 TYE7; fungal twist-like factor
C Tal/Twist/Atonal/Hen, HEN
D K09075 NHLH, HEN, NSCL; nescient helix-loop-helix protein
C Tal/Twist/Atonal/Hen, Mesp
D K09076 MESP; mesoderm posterior
D K09077 MSGN1; mesogenin 1
C Tal/Twist/Atonal/Hen, Atonal
D K08033 NEUROD1; neurogenic differentiation factor 1
D K09078 NEUROD2; neurogenic differentiation factor 2
D K09079 NEUROD4, ATOH3, MATH3; neurogenic differentiation factor 4
D K09080 NEUROD6, ATOH2, MATH2; neurogenic differentiation factor 6
D K09081 NEUROG1; neurogenin 1
D K09082 NEUROG2; neurogenin 2
D K08028 NEUROG3; neurogenin 3
D K09083 ATOH1_7; atonal protein 1/7
D K09084 ATOH8; atonal protein 8
D K24145 BHLHA9; class A basic helix-loop-helix protein 9
D K09085 BHLHB1_6_7; class B basic helix-loop-helix protein 1/6/7
D K08040 BHLHB8, MIST1; class B basic helix-loop-helix protein 8
C Tal/Twist/Atonal/Hen, Pancreatic factors
D K09086 BHLHB4_5, BETA; class B basic helix-loop-helix protein 4/5
C Hairy, Hairy/E(SPL)
D K06054 HES1; hairy and enhancer of split 1
D K09087 HES2_6_7; hairy and enhancer of split 2/6/7
D K09088 HES3; hairy and enhancer of split 3
D K09089 HES4; hairy and enhancer of split 4
D K06055 HES5; hairy and enhancer of split 5
D K09090 HESN; hairy and enhancer of split, invertebrate
D K09091 HEY; hairy and enhancer of split related with YRPW motif
D K03729 BHLHB2, DEC1; class B basic helix-loop-helix protein 2
D K03730 BHLHB3, DEC2; class B basic helix-loop-helix protein 3
D K09092 TCFL5, CHA; transcription factor-like 5
D K27237 CWO; transcription factor CWO
C Hairy, Fungal regulators
D K06658 PHO4; phosphate system positive regulatory protein PHO4
D K06654 PHO80; phosphate system cyclin PHO80
C Factors with PAS domain
D K09093 AHR; aryl hydrocarbon receptor
D K09094 AHRR, AHH; aryl hydrocarbon receptor repressor
D K08268 HIF1A; hypoxia-inducible factor 1 alpha
D K09095 HIF2A, EPAS1; hypoxia-inducible factor 2 alpha
D K09096 HIF3A; hypoxia-inducible factor 3 alpha
D K09097 ARNT; aryl hydrocarbon receptor nuclear translocator
D K15589 ARNT2; aryl hydrocarbon receptor nuclear translocator 2
D K09098 NPAS1_3; neuronal PAS domain-containing protein 1/3
D K09026 NPAS2; neuronal PAS domain-containing protein 2
D K26457 NPAS4; neuronal PAS domain-containing protein 4
D K02223 CLOCK, KAT13D; circadian locomoter output cycles kaput protein [EC:2.3.1.48]
D K02296 ARNTL, BMAL1, CYC; aryl hydrocarbon receptor nuclear translocator-like protein 1
D K09099 ARNTL2, BMAL2; aryl hydrocarbon receptor nuclear translocator-like protein 2
D K09100 SIM; single-minded
C Yabby
D K25796 YAB; plant-specific transcription factor YABBY family protein
C INO
D K09102 INO; heteromeric Ino2p/Ino4p transcription factor
C HLH domain only
D K04680 ID1; DNA-binding protein inhibitor ID1
D K17693 ID2; DNA-binding protein inhibitor ID2
D K17694 ID3; DNA-binding protein inhibitor ID3
D K17695 ID4; DNA-binding protein inhibitor ID4
D K17696 EMC; DNA-binding protein inhibitor ID, other
D K09103 EBF, COE; early B-cell factor
D K21626 CCNDBP1, DIP1, GCIP; cyclin-D1-binding protein 1
D K22495 SOHLH1; spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1
D K12126 PIF3; phytochrome-interacting factor 3
D K16189 PIF4; phytochrome-interacting factor 4
D K13422 MYC2; transcription factor MYC2
D K20558 SPCH; transcription factor SPEECHLESS
D K26213 FAMA; transcription factor FAMA
D K26214 FIT; transcription factor FER-LIKE IRON
D K09104 TX; delilah
D K22484 CBF1; transcriptional regulator CBF1
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
D K09105 TFE3; transcription factor E3
D K15590 TFEB; transcription factor EB
D K15591 TFEC; transcription factor EC
D K09455 MITF; microphthalmia-associated transcription factor
D K09106 USF; upstream stimulatory factor
D K07197 SREBP1, SREBF1; sterol regulatory element-binding transcription factor 1
D K09107 SREBP2, SREBF2; sterol regulatory element-binding transcription factor 2
D K09108 TFAP4; transcription factor AP-4
C Cell cycle controlling factors, Myc
D K04377 MYC; Myc proto-oncogene protein
D K09109 NMYC, MYCN; N-myc proto-oncogene protein
D K09110 LMYC, MYCL; L-myc proto-oncogene protein
D K09111 BMYC, MYCB; brain expressed myelocytomatosis oncogene
D K09112 SMYC, MYCS; myc-like oncogene
C Cell cycle controlling factors, Mad/Max
D K04453 MAX; Max protein
D K09113 MLX; MAX-like protein X
D K09114 MXD, MAD; MAX dimerization protein
D K09115 MNT, ROX; MAX-binding protein
C Other bHLH-ZIP factors
D K17482 SPZ1; spermatogenic leucine zipper protein 1
B Other basic domains
C NF-1
D K09168 NFIA; nuclear factor I/A
D K09169 NFIB; nuclear factor I/B
D K09170 NFIC; nuclear factor I/C
D K09171 NFIX; nuclear factor I/X
D K09172 NFIN; nuclear factor I, invertebrate
C RF-X
D K09173 RFX1_2_3; regulatory factor X 1/2/3
D K09174 RFX4; regulatory factor X 4
D K08061 RFX5; regulatory factor X 5
D K19521 RFX6; regulatory factor X 6
D K09175 RFX7; DNA-binding protein RFX7
C AP-2 (bHSH)
D K09176 TFAP2A_B; transcription factor AP-2 alpha/beta
D K09177 TFAP2C; transcription factor AP-2 gamma
D K09178 TFAP2D; transcription factor AP-2 delta
D K09179 TFAP2E; transcription factor AP-2 epsilon
D K09180 TFAP2N; transcription factor AP-2, invertebrate
B Zinc finger
C Cys4 thyroid hormone receptor-like
D K05547 THRA, NR1A1; thyroid hormone receptor alpha
D K08362 THRB, NR1A2; thyroid hormone receptor beta
D K08527 RARA, NR1B1; retinoic acid receptor alpha
D K08528 RARB, NR1B2; retinoic acid receptor beta
D K08529 RARG, NR1B3; retinoic acid receptor gamma
D K07294 NR1C1, PPARA; peroxisome proliferator-activated receptor alpha
D K04504 NR1C2, PPARD; peroxisome proliferator-activated receptor delta
D K08530 NR1C3, PPARG; peroxisome proliferator-activated receptor gamma
D K03728 NR1D1; nuclear receptor subfamily 1 group D member 1
D K08531 NR1D2; nuclear receptor subfamily 1 group D member 2
D K08701 NR1D3; nuclear receptor subfamily 1 group D member 3
D K08532 NR1F1, RORA; RAR-related orphan receptor alpha
D K08533 NR1F2, RORB; RAR-related orphan receptor beta
D K08534 NR1F3, RORC; RAR-related orphan receptor gamma
D K14033 NR1F4; nuclear receptor subfamily 1 group F member 4
D K08536 NR1H3, LXRA; liver X receptor alpha
D K08535 NR1H2, LXRB; liver X receptor beta
D K08537 NR1H4, FXR; farnesoid X receptor
D K08538 NR1H5, FXRB; farnesoid X receptor beta
D K14034 NR1H1, EcR; ecdysone receptor
D K08539 VDR, NR1I1; vitamin D3 receptor
D K08540 NR1I2, PXR; pregnane X receptor
D K08541 NR1I3, CAR; constitutive androstane receptor
D K14035 NR1IN; nuclear receptor subfamily 1 group I
C Cys4 hepatocyte nuclear factor 4-like
D K07292 NR2A1, HNF4A; hepatocyte nuclear factor 4-alpha
D K08037 NR2A2, HNF4G; hepatocyte nuclear factor 4-gamma
D K08542 NR2A3, HNF4B; hepatocyte nuclear factor 4-beta
D K08704 NR2A4, Hnf4; hepatocyte nuclear factor 4
D K07295 NR2AN, dsf; nuclear receptor subfamily 2 group A
D K08524 RXRA, NR2B1; retinoid X receptor alpha
D K08525 RXRB, NR2B2; retinoid X receptor beta
D K08526 RXRG, NR2B3; retinoid X receptor gamma
D K14030 NR2B4, usp; nuclear receptor subfamily 2 group B member 4
D K08543 NR2C1, TR2; testicular receptor 2
D K08544 NR2C2, TR4; testicular receptor 4
D K14031 NR2CN; nuclear receptor subfamily 2 group C
D K08545 NR2E1, TLX, tll; nuclear receptor subfamily 2 group E member 1
D K08546 NR2E3, PNR; nuclear receptor subfamily 2 group E member 3
D K08547 NR2F1, TFCOUP1; COUP transcription factor 1
D K08548 NR2F2, TFCOUP2; COUP transcription factor 2
D K14032 NR2F3, svp; nuclear receptor subfamily 2 group F member 3
D K08702 NR2F5, SVP46; nuclear receptor subfamily 2 group F member 5
D K08549 NR2F6, EAR2; nuclear receptor subfamily 2 group F member 6
C Cys4 estrogen receptor-like
D K08550 ESR1, NR3A1; estrogen receptor alpha
D K08551 ESR2, NR3A2; estrogen receptor beta
D K08552 NR3B1, ESRRA; estrogen-related receptor alpha
D K08553 NR3B2, ESRRB; estrogen-related receptor beta
D K08554 NR3B3, ESRRG; estrogen-related receptor gamma
D K08703 NR3BN, ERR; estrogen-related receptor ERR
D K05771 NR3C1, GR; glucocorticoid receptor
D K08555 NR3C2, MR; mineralocorticoid receptor
D K08556 PGR, NR3C3; progesterone receptor
D K08557 AR, NR3C4; androgen receptor
C Cys4 nerve growth factor IB-like
D K04465 NR4A1, HMR; nuclear receptor subfamily 4 group A member 1
D K08558 NR4A2, NURR1; nuclear receptor subfamily 4 group A member 2
D K08559 NR4A3, NOR1; nuclear receptor subfamily 4 group A member 3
C Cys4 Fushi tarazu-F1-like
D K08560 NR5A1, SF1; steroidogenic factor 1
D K08027 NR5A2, FTF; nuclear receptor subfamily 5 group A member 2
D K08705 NR5A3, ftz-f1; nuclear receptor subfamily 5 group A member 3
C Cys4 germ cell nuclear factor
D K08561 NR6A1, GCNF; germ cell nuclear factor
D K09185 NR6AN; nuclear receptor subfamily 6 group A
C Cys4 Knirps/DAX1-like
D K08706 NR0AN, kni; nuclear receptor subfamily 0 group A
D K08562 NR0B1, DAX1; nuclear receptor subfamily 0 group B member 1
D K08563 NR0B2, SHP; nuclear receptor subfamily 0 group B member 2
C Cys4 GATA-factors
D K09182 GATA1; GATA-binding protein 1
D K17894 GATA2; GATA-binding protein 2
D K17895 GATA3; GATA-binding protein 3
D K09183 GATA4; GATA-binding protein 4
D K17896 GATA5; GATA-binding protein 5
D K17897 GATA6; GATA-binding protein 6
D K09184 GATAF; GATA-binding protein, other eukaryote
D K21630 ZGLP1; GATA-type zinc finger protein 1
D K22040 TRPS1; atypical GATA-binding protein TRPS1
D K23407 GATAD1; GATA zinc finger domain-containing protein 1
D K23194 GATAD2; transcriptional repressor p66
D K05628 RERE; arginine-glutamic acid dipeptide repeats protein
D K11660 MTA; metastasis-associated protein MTA
D K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D K17399 DNMT3B; DNA (cytosine-5)-methyltransferase 3B [EC:2.1.1.37]
D K17400 DNMT3L; DNA (cytosine-5)-methyltransferase 3-like
D K10779 ATRX; transcriptional regulator ATRX
D K18658 ASH1; transcriptional regulatory protein ASH1
C Cys2His2 SP/KLF family and related proteins
D K04684 SP1; transcription factor Sp1
D K09192 SP2; transcription factor Sp2
D K09193 SP3; transcription factor Sp3
D K09194 SP4; transcription factor Sp4
D K09195 SP5; transcription factor Sp5
D K09196 SP6; transcription factor Sp6
D K09197 SP7; transcription factor Sp7
D K09198 SP8; transcription factor Sp8
D K09199 SP9; transcription factor Sp9
D K09200 SP-N; transcription factor Sp, invertebrate
D K09204 KLF1; krueppel-like factor 1
D K17845 KLF2; krueppel-like factor 2
D K15605 KLF3; krueppel-like factor 3
D K17846 KLF4; krueppel-like factor 4
D K09206 KLF5; krueppel-like factor 5
D K09207 KLF6_7; krueppel-like factor 6/7
D K09205 KLF8_12; krueppel-like factor 8/12
D K09208 KLF9S, BTEB; krueppel-like factor 9/13/14/16
D K09209 KLF10_11, TIEG; krueppel-like factor 10/11
D K09210 KLF15; krueppel-like factor 15
D K09211 KLF17; krueppel-like factor 17
D K09203 EGR1; early growth response protein 1
D K12496 EGR2; early growth response protein 2
D K12497 EGR3; early growth response protein 3
D K12498 EGR4; early growth response protein 4
D K09202 SWI5; regulatory protein SWI5
D K09234 WT1; Wilms tumor protein 1
D K27541 ZFX_Y; zinc finger X/Y-chromosomal protein
D K12379 HKB; huckebein
C Cys2His2 GLI-like
D K16797 GLI1; zinc finger protein GLI1
D K16798 GLI2; zinc finger protein GLI2
D K06230 GLI3; zinc finger protein GLI3
D K09232 GLIS1_3; zinc finger protein GLIS1/3
D K09233 GLIS2; zinc finger protein GLIS2
D K09224 ZIC1; zinc finger protein ZIC 1
D K06235 ZIC2; zinc finger protein ZIC 2
D K18487 ZIC3; zinc finger protein ZIC 3
D K09225 ZIC4; zinc finger protein ZIC 4
D K09226 ZIC5; zinc finger protein ZIC 5
D K09227 ZICN; zinc finger protein ZIC, invertebrate
D K16799 CI; transcriptional activator cubitus interruptus
C Cys2His2 Snail
D K05707 SNAI1; snail 1
D K05706 SNAI2, SLUG; snail 2
D K09217 SNAI3; snail 3
D K09219 SCRT; scratch
D K25795 INSM; insulinoma-associated protein
C Cys2His2 BTB-ZF factors
D K10488 ZBTB1; zinc finger and BTB domain-containing protein 1
D K10489 ZBTB2; zinc finger and BTB domain-containing protein 2
D K10490 ZBTB3; zinc finger and BTB domain-containing protein 3
D K10491 ZBTB4; zinc finger and BTB domain-containing protein 4
D K10492 ZBTB5; zinc finger and BTB domain-containing protein 5
D K10493 ZBTB6; zinc finger and BTB domain-containing protein 6
D K10494 ZBTB7; zinc finger and BTB domain-containing protein 7
D K10495 ZBTB8; zinc finger and BTB domain-containing protein 8
D K10496 ZBTB9; zinc finger and BTB domain-containing protein 9
D K10497 ZBTB10, RINZF; zinc finger and BTB domain-containing protein 10
D K10498 ZBTB11; zinc finger and BTB domain-containing protein 11
D K10499 ZBTB12; zinc finger and BTB domain-containing protein 12
D K24804 ZBTB14; zinc finger and BTB domain-containing protein 14
D K10055 ZBTB16, PLZF; zinc finger and BTB domain-containing protein 16
D K10500 ZBTB17, MIZ1; zinc finger and BTB domain-containing protein 17
D K10501 ZBTB20, HOF, DPZF; zinc finger and BTB domain-containing protein 20
D K24805 ZBTB21; zinc finger and BTB domain-containing protein 21
D K10502 ZBTB22, BING1; zinc finger and BTB domain-containing protein 22
D K10503 ZBTB24, BIF1; zinc finger and BTB domain-containing protein 24
D K10504 ZBTB25; zinc finger and BTB domain-containing protein 25
D K10505 ZBTB26; zinc finger and BTB domain-containing protein 26
D K10506 ZBTB32, TZFP; zinc finger and BTB domain-containing protein 32
D K10507 ZBTB33, KAISO; zinc finger and BTB domain-containing protein 33
D K10508 ZBTB34; zinc finger and BTB domain-containing protein 34
D K24806 ZBTB35, ZNF131; zinc finger and BTB domain-containing protein 35
D K10509 ZBTB37; zinc finger and BTB domain-containing protein 37
D K10510 ZBTB38; zinc finger and BTB domain-containing protein 38
D K10511 ZBTB39; zinc finger and BTB domain-containing protein 39
D K10512 ZBTB40; zinc finger and BTB domain-containing protein 40
D K10513 ZBTB41; zinc finger and BTB domain-containing protein 41
D K10514 ZBTB43; zinc finger and BTB domain-containing protein 43
D K10515 ZBTB44, BTBD15; zinc finger and BTB domain-containing protein 44
D K10516 ZBTB45; zinc finger and BTB domain-containing protein 45
D K10517 ZBTB46, BTBD4; zinc finger and BTB domain-containing protein 46
D K10518 ZBTB47; zinc finger and BTB domain-containing protein 47
D K10519 ZBTB48, HKR3; zinc finger and BTB domain-containing protein 48
D K24807 ZBTB49; zinc finger and BTB domain-containing protein 49
D K23196 ZBTB18_42; zinc finger and BTB domain-containing protein 18/42
D K22402 GZF1; GDNF-inducible zinc finger protein 1
D K15618 BCL6; B-cell lymphoma 6 protein
D K22648 BCL6B; B-cell CLL/lymphoma 6 member B protein
D K24383 PATZ1; POZ-AT hook zinc finger protein 1
D K26610 VEZF1; vascular endothelial zinc finger 1
D K24384 HIC; hypermethylated in cancer protein
D K24385 MYNN; myoneurin
D K09237 TTK; tramtrack
D K02174 BR-C; broad-complex core protein
C Cys2His2 BED
D K24637 ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
D K24638 ZBED2; zinc finger BED domain-containing protein 2
D K24639 ZBED3; zinc finger BED domain-containing protein 3
D K24640 ZBED4; zinc finger BED domain-containing protein 4
D K24641 ZBED6; zinc finger BED domain-containing protein 6
C Cys2His2 PRDM
D K24501 PRDM1; PR domain zinc finger protein 1 [EC:2.1.1.-]
D K11432 PRDM2, RIZ; [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
D K04462 MECOM, EVI1, PRDM3; [histone H3]-lysine9 N-methyltransferase (ecotropic virus integration site 1 protein) [EC:2.1.1.367]
D K12463 PRDM4; PR domain zinc finger protein 4 [EC:2.1.1.-]
D K22534 PRDM5; PR domain zinc finger protein 5 [EC:2.1.1.-]
D K20795 PRDM6; [histone H4]-lysine20 N-methyltransferase PRDM6 [EC:2.1.1.361]
D K20796 PRDM7_9; [histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:2.1.1.354]
D K20797 PRDM8; PR domain zinc finger protein 8 [EC:2.1.1.-]
D K24643 PRDM10; PR domain zinc finger protein 10 [EC:2.1.1.-]
D K24644 PRDM11; PR domain zinc finger protein 11 [EC:2.1.1.-]
D K24645 PRDM13; PR domain zinc finger protein 13 [EC:2.1.1.-]
D K24646 PRDM14; PR domain zinc finger protein 14 [EC:2.1.1.-]
D K24647 PRDM15; PR domain zinc finger protein 15 [EC:2.1.1.-]
D K22410 PRDM16; [histone H3]-lysine9 N-methyltransferase [EC:2.1.1.367]
C Cys2His2 metabolic regulators in fungi
D K09238 ACE2; metallothionein expression activator
D K09466 ADR1; zinc finger protein ADR1
D K09467 MIG; zinc-finger protein CreA/MIG
D K09468 MSN2_4; zinc finger protein MSN2/4
D K19798 GIS1; transcriptional activator/repressor GIS1
D K19799 RPH1; DNA damage-responsive transcriptional repressor / [histone H3]-trimethyl-L-lysine36 demethylase [EC:1.14.11.69]
C Cys2His2 others
D K09215 OSR, ODD; odd-skipped
D K09216 OVOL; ovo
D K09220 IKZF, ZNFN1A; IKAROS family zinc finger protein
D K09221 MZF1; myeloid zinc finger protein 1
D K09222 REST; RE1-silencing transcription factor
D K09223 GFI1; growth factor independent 1
D K09236 TSHZ; teashirt
D K09239 HIVEP; human immunodeficiency virus type I enhancer-binding protein
D K17452 AEBP2; zinc finger protein AEBP2
D K19484 PLAG1; zinc finger protein PLAG1
D K19485 PLAGL1; zinc finger protein PLAGL1
D K19486 PLAGL2; zinc finger protein PLAGL2
D K20210 RREB1; ras-responsive element-binding protein 1
D K22045 BCL11A; B-cell lymphoma/leukemia 11A
D K22046 BCL11B; B-cell lymphoma/leukemia 11B
D K22401 E4F1; transcription factor E4F1 / E3 ubiquitin-protein ligase [EC:2.3.2.27]
D K23195 CTCF, CTCFL; transcriptional repressor CTCF
D K23317 MTF1; metal regulatory transcription factor 1
D K24146 BNC; zinc finger protein basonuclin
D K09191 GTF3A; general transcription factor IIIA
D K09201 YY; transcription factor YY
D K07466 RFA1, RPA1, rpa; replication factor A1
D K26101 ZNF16, HZF1; zinc finger protein 16
D K24851 ZNF142; zinc finger protein 142
D K24370 ZNF148; zinc finger protein 148
D K27241 ZNF219; zinc finger protein 219
D K12458 ZNF274; zinc finger protein 274
D K26728 ZNF292; zinc finger protein 292
D K24371 ZNF335; zinc finger protein 335
D K24852 ZNF341; zinc finger protein 341
D K23480 ZNF362_384, LIN-29; zinc finger protein 362/384
D K26729 ZNF407; Zinc finger protein 407
D K24372 ZNF408; zinc finger protein 408
D K25858 ZNF410; zinc finger protein 410
D K22870 ZNF423; zinc finger protein 423
D K24853 ZNF462; zinc finger protein 462
D K24373 ZNF513; zinc finger protein 513
D K22411 ZNF516; zinc finger protein 516
D K24916 ZNF521, EVI3; zinc finger protein 521
D K26978 ZNF526_574; zinc finger protein 526/574
D K27242 ZNF536; zinc finger protein 536
D K24692 ZNF638; zinc finger protein 638
D K24374 ZNF644; zinc finger protein 644
D K27106 ZNF668; zinc finger protein 668
D K24375 ZNF687; zinc finger protein 687
D K24376 ZNF711; zinc finger protein 711
D K24377 ZNF750; zinc finger protein 750
D K09228 KRAB; KRAB domain-containing zinc finger protein
D K09229 ZKSCAN; KRAB and SCAN domains-containing zinc finger protein
D K09230 SCAN; SCAN domain-containing zinc finger protein
D K24502 FEZF; Fez family zinc finger protein
D K25209 CASZ1; zinc finger protein castor
D K25794 HINFP; histone H4 transcription factor
D K09231 KR; krueppel
D K13943 CBT; cabut
D K09213 HB; hunchback
D K09214 GL; glass
D K02215 CF2; chorion factor 2
D K22535 DRM; drumstick
D K25869 IDD1_2; zinc finger protein IDD1/2
D K25870 IDD3S; zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
D K25871 IDD14_15_16; zinc finger protein IDD14/15/16
D K09235 RME1; zinc finger protein RME1
D K09465 BRLA; zinc finger protein BrlA
D K19487 SFP1; transcription factor SFP1
D K22412 SDC-1; zinc finger protein Sdc-1
D K21455 CON7; transcription factor CON7
D K21543 CRZ1, CRZA; transcription factor CRZ1
D K21544 NSF1, BCR1, DVRA; C2H2 transcription facotor
D K21545 MNL1, SEB1, SEBA, COM2; C2H2 transcription facotor
D K21597 CAS5; cell wall integrity transcriptional regulator CAS5
C Cys2HisCys zinc factors
D K23192 MYT1; myelin transcription factor 1
D K23193 MYT1L; myelin transcription factor 1-like protein
D K24386 ST18; suppression of tumorigenicity 18 protein
D K17441 ZFPM1, FOG1; zinc finger protein ZFPM1
D K17442 ZFPM2, FOG2; zinc finger protein ZFPM2
D K11308 MYST1, MOF, KAT8; histone acetyltransferase MYST1 [EC:2.3.1.48]
D K11307 MYST2, HBO1, KAT7; histone acetyltransferase MYST2 [EC:2.3.1.48]
D K11305 MYST3, KAT6A; histone acetyltransferase MYST3 [EC:2.3.1.48]
D K11306 MYST4, KAT6B; histone acetyltransferase MYST4 [EC:2.3.1.48]
D K11304 TIP60, KAT5, ESA1; histone acetyltransferase HTATIP [EC:2.3.1.48]
D K24387 L3MBTL; lethal(3)malignant brain tumor-like protein
D K15263 LYER; cell growth-regulating nucleolar protein
C Cys3His zinc factors
D K24388 ZC3H8; zinc finger CCCH domain-containing protein 8
D K15690 RC3H; RING finger and CCCH-type zinc finger domain-containing protein
D K10643 CNOT4, NOT4, MOT2; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
C Cys2CysHis zinc factors
D K23203 THAP1_3; THAP domain-containing protein 1/3
D K23206 THAP5_8; THAP domain-containing protein 5/8
D K23208 THAP7; THAP domain-containing protein 7
D K23210 THAP10; THAP domain-containing protein 10
D K23211 THAP11; THAP domain-containing protein 11
C CXXC CpG-binding proteins
D K09186 MLL1; [histone H3]-lysine4 N-trimethyltransferase MLL1 [EC:2.1.1.354]
D K14959 MLL4; [histone H3]-lysine4 N-trimethyltransferase MLL4 [EC:2.1.1.354]
D K14960 CXXC1, SPP1, CPS40; COMPASS component SPP1
D K22760 CXXC5; CXXC-type zinc finger protein 5
D K13097 TET1; methylcytosine dioxygenase [EC:1.14.11.80]
D K24309 TET2_3; methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
D K00558 DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K10276 FBXL10_11, KDM2; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
D K10285 FBXL19; F-box and leucine-rich repeat protein 19
D K11589 MBD1; methyl-CpG-binding domain protein 1
D K03344 IDAX; Dvl-binding protein IDAX
C Cys6 metabolic regulators in fungi
D K09240 CAT8; transcriptional regulatory protein CAT8
D K27389 RDS2, ERT1, GSM1; transcription activator of gluconeogenesis
D K09241 GAL4; transcriptional regulatory protein GAL4
D K09242 LEU3; transcriptional regulatory protein LEU3
D K09243 UME6; transcriptional regulatory protein UME6
D K09244 AMDR; transcriptional regulatory protein AMDR
D K09245 UGA3; transcriptional activator protein UGA3
D K09246 ARG81, ARGR2; arginine metabolism regulation protein II
D K09247 CYP1, HAP1; heme activator protein 1
D K09248 PUT3; proline utilization trans-activator
D K21641 RGT1; glucose transport transcription regulator RGT1
D K21546 GLIZ; C6 transcription factor GliZ
D K21450 ARAR; arabinolytic transcriptional activator AraR
D K23629 ASAR; C6 transcription factor AsaR
D K21547 PRO1, NOSA; C6 transcription factor Pro1
D K21632 WOR2; white-opaque regulator 2
D K21633 CZF1; zinc cluster transcription factor CZF1
C Other zinc fingers
D K11467 PHF1, PCL1; PHD finger protein 1
D K23310 PHF6; PHD finger protein 6
D K11486 PHF19, PCL3; PHD finger protein 19
D K26271 MS1, MMD1; PHD finger protein MS1/MMD1
D K26274 AL; PHD finger protein ALFIN-LIKE
D K11485 MTF2, PCL2; metal regulatory transcription factor 2
D K12236 NFX1; transcriptional repressor NF-X1
D K19749 RAI1; retinoic acid-induced protein 1
D K09250 CNBP; cellular nucleic acid-binding protein
D K24369 ZC4H2; zinc finger C4H2 domain-contaning protein
D K24769 TCF20; transcription factor 20
D K22383 IRF2BP; interferon regulatory factor 2-binding protein
D K27448 IRF2BP2; interferon regulatory factor 2-binding protein 2
D K09249 ABF1, BAF1; ARS-binding factor 1
B Helix-turn-helix
C Homeo domain ANTP: HOXL
D K21950 HOXA9; homeobox protein Hox-A9
D K09294 HOX_9; homeobox protein HoxB/C/D9
D K17443 HOXA10; homrobox protein Hox-A10
D K17444 HOXC10; homrobox protein Hox-C10
D K09295 HOXD10; homrobox protein Hox-D10
D K21951 HOXA11; homeobox protein Hox-A11
D K09296 HOX_11; homeobox protein HoxC/D11
D K09297 HOX_12; homeobox protein HoxC/D12
D K09298 HOX_13; homeobox protein HoxA/B/C/D13
D K09301 HOX_1; homeobox protein HoxA/B/D1
D K09302 HOX_2; homeobox protein HoxA/B2
D K09303 HOX_3; homeobox protein HoxA/B/D3
D K09304 HOX_4; homeobox protein HoxA/B/C/D4
D K09305 HOX_5; homeobox protein HoxA/B/C5
D K09306 HOX_6; homeobox protein HoxA/B/C6
D K09307 HOX_7; homeobox protein HoxA/B7
D K09308 HOX_8; homeobox protein HoxB/C/D8
D K09310 GSH; homeobox protein GSH
D K07594 IPF1, PDX1; insulin promoter factor 1
D K09312 CDX1_4; homeobox protein CDX1/4
D K22234 CDX2; homeobox protein CDX2
D K09320 EVX; homeobox even-skipped homolog protein
D K09321 GBX; homeobox protein GBX
D K08025 HLXB9, HB9; homeobox protein HB9
D K09322 MEOX, MOX; homeobox protein MOX
D K09300 ABDB; homeobox protein abdominal-B and related proteins
D K18659 BCD; homeotic protein bicoid
C Homeo domain ANTP: NKL
D K09309 NKX1; homeobox protein Nkx-1
D K09342 NKX2-1, TITF1; homeobox protein Nkx-2.1
D K08029 NKX2-2; homeobox protein Nkx-2.2
D K09343 NKX2-3; homeobox protein Nkx-2.3
D K09344 NKX2-4; homeobox protein Nkx-2.4
D K09345 NKX2-5; homeobox protein Nkx-2.5
D K09346 NKX2-6; homeobox protein Nkx-2.6
D K09347 NKX2-8; homeobox protein Nkx-2.8
D K09348 NKX3-1; homeobox protein Nkx-3.1
D K09995 NKX3-2, BAPX1; homeobox protein Nkx-3.2
D K09349 NKX5, HMX; homeobox protein Nkx-5
D K08030 NKX6-1; homeobox protein Nkx-6.1
D K09350 NKX6-2; homeobox protein Nkx-6.2
D K09351 NKX6-3; homeobox protein Nkx-6.3
D K09352 NKXN; homeobox protein Nkx, invertebrate
D K27662 PNX; homeobox protein Pnx
D K09314 DLX1_4_6; homeobox protein DLX1/4/6
D K18488 DLX2; homeobox protein DLX2
D K09315 DLX3; homeobox protein DLX3
D K18489 DLX5; homeobox protein DLX5
D K09340 TLX1, HOX11; T-cell leukemia homeobox protein 1
D K15606 TLX2, HOX11L1; T-cell leukemia homeobox protein 2
D K15607 TLX3, HOX11L2; T-cell leukemia homeobox protein 3
D K09339 HLX1; homeobox protein HLX1
D K09317 EMX; homeobox protein EMX
D K09318 VAX; homeobox protein ventral anterior
D K09319 EN; homeobox protein engrailed
D K09341 MSX; homeobox protein MSX
D K09353 LBX; homeobox protein LBX
D K08024 HHEX, HEX, PRH; homeobox protein HEX
D K09360 BARHL; BarH-like
D K09361 BARX; BarH-like homeobox
D K10164 NANOG; homeobox protein Nanog
D K24874 BSX; brain-specific homeobox protein
D K24875 DBX; homeobox protein DBX
D K24876 NOTO; homeobox protein notochord
D K24877 VENTX; homeobox protein VENTX
C Homeo domain Paired-related
D K09452 ARX; homeobox protein aristaless-related
D K09323 ALX3; homeobox protein aristaless-like 3
D K09451 ALX4; homeobox protein aristaless-like 4
D K09324 GSC; homeobox protein goosecoid
D K09325 GSCL; homeobox protein goosecoid-like
D K09326 OTX1; homeobox protein OTX1
D K18490 OTX2; homeobox protein OTX2
D K09327 PROP1; homeobox protein prophet of Pit-1
D K09328 UNC4; homeobox protein Unc-4
D K09329 PRRX, PMX; paired mesoderm homeobox protein
D K09330 PHOX2, PMX2; paired mesoderm homeobox protein 2
D K09331 SHOX; short stature homeobox protein
D K09332 RAX, RX; retina and anterior neural fold homeobox protein
D K09333 RAXL; retina and anterior neural fold homeobox-like protein
D K09334 ALX1, CART1; ALX homeobox protein 1
D K09335 VSX1; visual system homeobox protein 1
D K09336 VSX2, CHX10; visual system homeobox protein 2
D K09337 CRX; cone-rod homeobox protein
D K18491 ESX1; homeobox protein ESX1
D K24199 NOBOX; homeobox protein NOBOX
D K09356 PITX1; paired-like homeodomain transcription factor 1
D K04686 PITX2; paired-like homeodomain transcription factor 2
D K09357 PITX3; paired-like homeodomain transcription factor 3
D K09354 HESX1; homeobox protein expressed in ES cells 1
D K24892 ARGFX; arginine-fifty homeobox
D K24893 DMBX1; diencephalon/mesencephalon homeobox protein 1
D K24894 DPRX; divergent paired-related homeobox
D K24895 DRGX, PRRXL1; dorsal root ganglia homeobox protein
D K24896 DUX; double homeobox protein
D K24897 HOPX; homeodomain-only protein
D K24898 ISX; intestine-specific homeobox
D K24899 LEUTX; leucine-twenty homeobox
D K24900 MIXL1; homeobox protein MIXL1
D K24901 OTP; homeobox protein orthopedia
D K24902 RHOXF1; rhox homeobox family member 1
D K24903 RHOXF2; rhox homeobox family member 2
D K24904 SEBOX; homeobox protein SEBOX
D K24905 TPRX1; tetra-peptide repeat homeobox protein 1
D K09382 PAX1_9; paired box protein 1/9
D K15608 PAX2; paired box protein 2
D K09381 PAX3_7; paired box protein 3/7
D K08032 PAX4; paired box protein 4
D K09383 PAX5; paired box protein 5
D K08031 PAX6; paired box protein 6
D K09293 PAX8; paired box protein 8
C Homeo domain LIM
D K09370 ISL1; insulin gene enhancer protein ISL-1
D K18492 ISL2; insulin gene enhancer protein ISL-2
D K09371 LMX1; LIM homeobox transcription factor 1
D K09372 LHX1; LIM homeobox protein 1
D K09373 LHX2_9; LIM homeobox protein 2/9
D K09374 LHX3_4; LIM homeobox protein 3/4
D K18493 LHX5; LIM homeobox protein 5
D K09375 LHX6_8; LIM homeobox protein 6/8
D K09377 CSRP; cysteine and glycine-rich protein
C Homeo domain POU
D K09363 POU1F, PIT1; POU domain transcription factor, class 1
D K09364 POU2F, OTF; POU domain transcription factor, class 2
D K09365 POU3F, OTF; POU domain transcription factor, class 3
D K09366 POU4F, BRN3; POU domain transcription factor, class 4
D K09367 POU5F; POU domain transcription factor, class 5
D K09368 POU6F; POU domain transcription factor, class 6
D K24884 HDX; highly divergent homeobox
D K08036 TCF1, HNF1A; transcription factor 1, hepatocyte nuclear factor 1-alpha
D K08034 TCF2, HNF1B; transcription factor 2, hepatocyte nuclear factor 1-beta
D K24885 HMBOX1; homeobox-containing protein 1
C Homeo domain SINE
D K15614 SIX1; homeobox protein SIX1
D K19472 SIX2; homeobox protein SIX2
D K19473 SIX3_6, OPTIX; homeobox protein SIX3/6
D K15615 SIX4; homeobox protein SIX4
D K19474 SIX5; homeobox protein SIX5
C Homeo domain ZF
D K09379 ZFHX2; zinc finger homeobox protein 2
D K09378 ZFHX3, ATBF1; zinc finger homeobox protein 3
D K09380 ZFHX4; zinc finger homeobox protein 4
D K09299 ZEB1; zinc finger homeobox protein 1
D K23560 ZEB2; zinc finger homeobox protein 2
D K22591 ADNP; activity-dependent neuroprotector homeobox protein
D K24878 ADNP2; activity-dependent neuroprotector homeobox protein 2
D K24879 ZHX1; zinc fingers and homeoboxes protein 1
D K24880 ZHX2; zinc fingers and homeoboxes protein 2
D K24881 ZHX3; zinc fingers and homeoboxes protein 3
D K24883 HOMEZ; homeobox and leucine zipper protein Homez
D K24882 NANOGNB; NANOG neighbor homeobox
C Homeo domain CUT
D K09313 CUTL; homeobox protein cut-like
D K08026 ONECUT1, HNF6; one cut domain, family member 1 (hepatocyte nuclear factor 6)
D K24170 ONECUT2; one cut domain family member 2
D K24171 ONECUT3; one cut domain family member 3
D K23225 SATB1; DNA-binding protein SATB1
D K23226 SATB2; DNA-binding protein SATB2
C Homeo domain PROS
D K20211 PROX1; prospero homeobox 1
D K20212 PROX2; prospero homeobox 2
C Homeo domain TALE
D K09355 PBX1; pre-B-cell leukemia transcription factor 1
D K15609 PBX2; pre-B-cell leukemia transcription factor 2
D K15610 PBX3; pre-B-cell leukemia transcription factor 3
D K15611 PBX4; pre-B-cell leukemia transcription factor 4
D K15613 MEIS1; homeobox protein Meis1
D K16670 MEIS2; homeobox protein Meis2
D K16671 MEIS3; homeobox protein Meis3
D K19383 TGIF1; homeobox protein TGIF1
D K19553 TGIF2; homeobox protein TGIF2
D K19554 TGIF2L, TGIFL; homeobox protein TGIF2L
D K24889 IRX; iroquois-class homeodomain protein IRX
D K24890 MKX; homeobox protein Mohawk
D K24891 PKNOX; homeobox protein PKNOX
D K16672 HTH; homeobox protein homothorax
D K09359 MATA2; mating-type protein A2
C Homeo domain other
D K22536 DAN, DANR; distal antenna
D K09338 HD-ZIP; homeobox-leucine zipper protein
D K09358 MATA1; mating-type protein A1
D K02646 PHO2; regulatory protein PHO2
D K12411 YOX1, YHP1; homeobox protein YOX1/YHP1
D K09362 K09362; homeo domain only family, other
C Fork head/winged helix developmental regulators
D K08035 FOXA2, HNF3B; forkhead box protein A2, hepatocyte nuclear factor 3-beta
D K09396 FOXC; forkhead box protein C
D K09385 FOXG; forkhead box protein G
D K09407 FOXN; forkhead box protein N
C Fork head/winged helix tissue-specific regulators
D K09387 FOXA1, HNF3A; forkhead box protein A1, hepatocyte nuclear factor 3-alpha
D K08038 FOXA3, HNF3G; forkhead box protein A3, hepatocyte nuclear factor 3-gamma
D K09402 FOXJ1; forkhead box protein J1
C Fork head/winged helix cell cycle-controlling factors, E2F
D K17454 E2F1; transcription factor E2F1
D K09389 E2F2; transcription factor E2F2
D K06620 E2F3; transcription factor E2F3
D K04682 E2F4_5; transcription factor E2F4/5
D K09390 E2F6; transcription factor E2F6
D K09391 E2F7_8; transcription factor E2F7/8
C Fork head/winged helix cell cycle-controlling factors, DP
D K04683 TFDP1; transcription factor Dp-1
D K09392 TFDP2; transcription factor Dp-2
D K09393 TFDP3; transcription factor Dp-3
C Fork head/winged helix other regulators
D K09395 FOXB; forkhead box protein B
D K09397 FOXD; forkhead box protein D
D K09398 FOXE; forkhead box protein E
D K09399 FOXF; forkhead box protein F
D K09400 FOXH; forkhead box protein H
D K09401 FOXI; forkhead box protein I
D K09403 FOXJ2_3; forkhead box protein J2/3
D K09404 FOXK; forkhead box protein K
D K09405 FOXL; forkhead box protein L
D K09406 FOXM; forkhead box protein M
D K07201 FOXO1; forkhead box protein O1
D K09408 FOXO3; forkhead box protein O3
D K12358 FOXO4; forkhead box protein O4
D K17847 FOXO6; forkhead box protein O6
D K23582 FOXP1; forkhead box protein P1
D K09409 FOXP2_4; forkhead box protein P2/4
D K10163 FOXP3, IPEX; forkhead box P3
D K09410 FOXQ, HFH1; forkhead box protein Q
D K26215 FOXR; forkhead box protein R
D K09412 FOXS; forkhead box protein S
D K09411 FOXX; forkhead box protein, other
D K09413 HCM1; forkhead transcription factor HCM1
D K24664 FKH; forkhead protein FKH
C Heat shock factors
D K09414 HSF1; heat shock transcription factor 1
D K09415 HSF2; heat shock transcription factor 2
D K09416 HSF3; heat shock transcription factor 3
D K09417 HSF4; heat shock transcription factor 4
D K09419 HSFF; heat shock transcription factor, other eukaryote
C Tryptophan clusters Myb, Myb-factors
D K09420 MYB, C-MYB; transcriptional activator Myb
D K09421 MYBL1, A-MYB; myb-related protein A
D K21769 MYBL2, B-MYB; myb-related protein B
D K09422 MYBP; transcription factor MYB, plant
D K23865 MYB30; transcription factor MYB30
D K16166 PAP1, MYB75; transcription factor MYB75
D K12133 LHY; MYB-related transcription factor LHY
D K12134 CCA1; circadian clock associated 1
C Tryptophan clusters Myb, Myb-like factors
D K09453 SNAPC4; snRNA-activating protein complex subunit 4
D K21625 DMTF1, DMP1; cyclin-D-binding Myb-like transcription factor 1
D K09423 BAS1; Myb-like DNA-binding protein BAS1
D K09424 REB1; Myb-like DNA-binding protein REB1
D K09425 K09425; Myb-like DNA-binding protein FlbD
D K09426 RAP1; Myb-like DNA-binding protein RAP1
D K09427 ADF1; Adh transcription factor 1
C Tryptophan clusters Ets-type
D K09428 ELF1_2_4; E74-like factor 1/2/4
D K09429 K09429, ELF3; E74-like factor 3
D K17101 ELF5; E74-like factor 5
D K17102 EHF; ETS homologous factor
D K04375 ELK1; ETS domain-containing protein Elk-1
D K09430 ELK3; ETS domain-containing protein Elk-3 (SRF accessory protein 2)
D K04376 ELK4, SAP1; ETS domain-containing protein Elk-4
D K09431 ETV1; ets translocation variant 1
D K09432 ETV2, ER71; ETS translocation variant 2
D K09433 ETV3; ETS translocation variant 3
D K15592 ETV4; ets translocation variant 4
D K15593 ETV5; ets translocation variant 5
D K03211 ETV6_7, yan; ETS translocation variant 6/7
D K09434 ERF; ETS domain-containing transcription factor ERF
D K02678 ETS1, pnt; C-ets-1
D K21932 ETS2; C-ets-2
D K09435 ERG; transcriptional regulator ERG
D K09436 FLI1; friend leukemia integration 1 transcription factor
D K09437 FEV; ETS oncogene family protein FEV
D K09438 SPI1; transcription factor PU.1
D K09439 SPIB; transcription factor Spi-B
D K09440 SPIC; transcription factor Spi-C
D K09441 GABPA; GA-binding protein transcription factor, alpha
D K09442 SPDEF; SAM pointed domain-containing ETS transcription factor
D K09443 K09443; ETS-type family, other
C Tryptophan clusters interferon-regulating factors
D K09444 IRF1; interferon regulatory factor 1
D K10153 IRF2; interferon regulatory factor 2
D K05411 IRF3; interferon regulatory factor 3
D K09445 IRF4; interferon regulatory factor 4
D K09446 IRF5; interferon regulatory factor 5
D K10154 IRF6; interferon regulatory factor 6
D K09447 IRF7; interferon regulatory factor 7
D K10155 IRF8; interferon regulatory factor 8
D K04693 IRF9, ISGF3G, P48; interferon regulatory factor 9
C TEA domain
D K09448 TEAD; transcriptional enhancer factor
C ARID
D K11653 ARID1; AT-rich interactive domain-containing protein 1
D K11765 ARID2; AT-rich interactive domain-containing protein 2
D K25856 ARID3; AT-rich interactive domain-containing protein 3
D K19194 ARID4A, RBP1; AT-rich interactive domain-containing protein 4A
D K19195 ARID4B; AT-rich interactive domain-containing protein 4B
D K25857 ARID5; AT-rich interactive domain-containing protein 5
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
D K02580 NFKB1; nuclear factor NF-kappa-B p105 subunit
D K04469 NFKB2; nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
D K04735 RELA; transcription factor p65
D K09253 RELB; transcription factor RelB
D K09254 REL; c-Rel proto-oncogene protein
C RHR (Rel homology region) Ankyrin only
D K04734 NFKBIA; NF-kappa-B inhibitor alpha
D K02581 NFKBIB; NF-kappa-B inhibitor beta
D K14214 NFKBID; NF-kappa-B inhibitor delta
D K05872 NFKBIE; NF-kappa-B inhibitor epsilon
D K14242 NFKBIZ; NF-kappa-B inhibitor zeta
D K09256 NFKBIL1; NF-kappa-B inhibitor-like protein 1
D K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2
D K09258 BCL3; B-cell CLL/lymphoma 3 protein
D K09454 GABPB; GA-binding protein transcription factor, beta
C RHR (Rel homology region) NF-AT
D K04446 NFATC1, NFAT2, NFATC; nuclear factor of activated T-cells, cytoplasmic 1
D K17332 NFATC2, NFAT1, NFATP; nuclear factor of activated T-cells, cytoplasmic 2
D K17333 NFATC3, NFAT4; nuclear factor of activated T-cells, cytoplasmic 3
D K17334 NFATC4, NFAT3; nuclear factor of activated T-cells, cytoplasmic 4
D K17335 NFAT5; nuclear factor of activated T-cells 5
C STAT
D K11220 STAT1; signal transducer and activator of transcription 1
D K11221 STAT2; signal transducer and activator of transcription 2
D K04692 STAT3; signal transducer and activator of transcription 3
D K11222 STAT4; signal transducer and activator of transcription 4
D K11223 STAT5A; signal transducer and activator of transcription 5A
D K11224 STAT5B; signal transducer and activator of transcription 5B
D K11225 STAT6; signal transducer and activator of transcription 6
C p53
D K04451 TP53, P53; tumor protein p53
D K10148 TP73; tumor protein p73
D K10149 TP63; tumor protein p63
C MADS-box regulators of differentiation, MEF-2
D K09260 MEF2A; MADS-box transcription enhancer factor 2A
D K09261 MEF2B; MADS-box transcription enhancer factor 2B
D K04454 MEF2C; MADS-box transcription enhancer factor 2C
D K09262 MEF2D; MADS-box transcription enhancer factor 2D
C MADS-box regulators of differentiation, Homeotic genes
D K09264 K09264; MADS-box transcription factor, plant
C MADS-box regulators of differentiation, Yeast regulators
D K12412 MCM1; pheromone receptor transcription factor
D K19808 ARG80, ARGR1; arginine metabolism regulation protein I
D K09265 RLM1; transcription factor RLM1
D K19807 SMP1; transcription factor SMP1
C MADS-box responders to external signals
D K04378 SRF; serum response factor
C SAND domain-containing proteins
D K15413 SP100; nuclear body protein Sp100
D K24503 SP110; nuclear body protein Sp110
D K24504 SP140; nuclear body protein Sp140
D K10603 AIRE; autoimmune regulator
D K23041 DEAF1; deformed epidermal autoregulatory factor 1
D K24505 GMEB; glucocorticoid modulatory element-binding protein
C TATA-binding proteins
D K03120 TBP, tbp; transcription initiation factor TFIID TATA-box-binding protein
C HMG SOX
D K09266 SRY; sex-determining region Y protein (SOX group A)
D K09267 SOX1S; transcription factor SOX1/3/14/21 (SOX group B)
D K16796 SOX2; transcription factor SOX2 (SOX group B)
D K23581 SOX4; transcription factor SOX4 (SOX group C)
D K09268 SOX11_12; transcription factor SOX11/12 (SOX group C)
D K09269 SOX5_6_13; transcription factor SOX5/6/13 (SOX group D)
D K09270 SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)
D K18435 SOX9; transcription factor SOX9 (SOX group E)
D K04495 SOX17; transcription factor SOX17 (SOX group F)
D K09271 SOX15_30; transcription factor SOX15/30
D K20225 CIC; capicua transcriptional repressor
D K21643 BBX, HBP2; HMG box transcription factor BBX
D K21644 HBP1; HMG box transcription factor 1
C HMG TCF-1
D K04492 LEF1; lymphoid enhancer-binding factor 1
D K02620 TCF7, TCF-1; transcription factor 7
D K04490 TCF7L1; transcription factor 7-like 1
D K04491 TCF7L2; transcription factor 7-like 2
C HMG2-related
D K09272 SSRP1, POB3; FACT complex subunit SSRP1/POB3
C UBF
D K09273 UBTF; upstream-binding transcription factor
C Other HMG box factors
D K22483 HMO1; transcriptional regulator HMO1
D K22496 RFG1, ROX1; repressor RFG1/ROX1
D K09274 K09274; HMG box factor, other
C Heteromeric CCAAT factors
D K08064 NFYA, HAP2; nuclear transcription factor Y, alpha
D K08065 NFYB, HAP3; nuclear transcription Y subunit beta
D K08066 NFYC, HAP5; nuclear transcription factor Y, gamma
C Grainyhead
D K09275 TFCP2; transcription factor CP2 and related proteins
C Cold-shock domain factors, DbpA-like
D K06099 CSDA, ZONAB; cold shock domain protein A
C Cold-shock domain factors, YB-1/DbpB-like
D K09276 YBX1, NSEP1; Y-box-binding protein 1
C Cold-shock domain factors, FRG Y2-like
D K09277 YBX2; Y-box-binding protein 2
C Runt
D K08367 RUNX1, AML1; runt-related transcription factor 1
D K09278 RUNX2, AML3; runt-related transcription factor 2
D K09279 RUNX3, AML2; runt-related transcription factor 3
D K20213 RUN; RUNX transcription factor Runt
D K20214 LZ; RUNX transcription factor Lozenge
D K09280 RUNXA_B; runt-related transcription factor
C MYRF
D K24768 MYRF; myelin regulatory factor [EC:3.4.-.-]
D K12769 NDT80; meiosis-specific transcription factor NDT80
B Other transcription factors
C HMGI(Y)
D K09282 HMGA1; high mobility group AT-hook protein 1
D K09283 HMGA2; high mobility group AT-hook protein 2
C NUPR
D K15626 NUPR1, COM1; nuclear protein 1
D K25793 NUPR2, NUPR1L; nuclear protein 2
E Line #4
C Pocket domain Rb
D K06618 RB1; retinoblastoma-associated protein
D K04681 RBL1; retinoblastoma-like protein 1
D K16332 RBL2; retinoblastoma-like protein 2
C Pocket domain CBP
D K04498 EP300, CREBBP, KAT3; E1A/CREB-binding protein [EC:2.3.1.48]
C T-box
D K10172 BRA, T; brachyury protein
D K10173 EOMES, TBR2; eomesodermin protein
D K10174 TBR1; T-box brain protein 1
D K10175 TBX1; T-box protein 1
D K10176 TBX2; T-box protein 2
D K10177 TBX3; T-box protein 3
D K10178 TBX4; T-box protein 4
D K10179 TBX5, HOS; T-box protein 5
D K10180 TBX6; T-box protein 6
D K10181 TBX10, TBX7; T-box protein 10
D K10182 TBX15, TBX14; T-box protein 15
D K10183 TBX18; T-box protein 18
D K10184 TBX19; T-box protein 19
D K10185 TBX20; T-box protein 20
D K10166 TBX21; T-box protein 21
D K10186 TBX22; T-box protein 22
C DMRT
D K19488 DMRT1; doublesex- and mab-3-related transcription factor 1
D K19489 DMRT2; doublesex- and mab-3-related transcription factor 2
D K19490 DMRT3; doublesex- and mab-3-related transcription factor 3
D K19491 DMRT4_5, DMRTA; doublesex- and mab-3-related transcription factor 4/5
D K19492 DMRT6, DMRTB; doublesex- and mab-3-related transcription factor 6
D K19493 DMRT7, DMRTC2; doublesex- and mab-3-related transcription factor 7
D K19494 DMRT8, DMRTC1; doublesex- and mab-3-related transcription factor 8
C LRRFIP
D K26434 LRRFIP; leucine-rich repeat flightless-interacting protein
C TCP
D K16221 TCP21, CHE; transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
C AP2/ERF
D K09284 AP2; AP2-like factor, euAP2 lineage
D K09285 OVM, ANT; AP2-like factor, ANT lineage
D K09287 RAV; RAV-like factor
D K09286 EREBP; EREBP-like factor
D K14516 ERF1; ethylene-responsive transcription factor 1
D K14517 ERF2; ethylene-responsive transcription factor 2
D K14507 ORCA2_3; AP2-domain DNA-binding protein ORCA2/3
D K13432 PTI4; pathogenesis-related genes transcriptional activator PTI4
D K13433 PTI5; pathogenesis-related genes transcriptional activator PTI5
D K13434 PTI6; pathogenesis-related genes transcriptional activator PTI6
C WRKY
D K18834 WRKY1; WRKY transcription factor 1
D K18835 WRKY2; WRKY transcription factor 2
D K13425 WRKY22; WRKY transcription factor 22
D K13423 WRKY25; WRKY transcription factor 25
D K13426 WRKY29; WRKY transcription factor 29
D K13424 WRKY33; WRKY transcription factor 33
C LOB
D K13944 LBD16; LOB domain-containing protein 16
D K21994 LBD18; LOB domain-containing protein 18
D K13945 LBD29; LOB domain-containing protein 29
C Copper-fist proteins fungal regulators
D K09281 K09281; copper-fist transcription factor
C Others
D K21404 AKNA; AT-hook-containing transcription factor
D K21595 CARF; calcium-responsive transcription factor
D K21596 CAMTA; calmodulin-binding transcription activator
D K21598 GCM; chorion-specific transcription factor GCM
D K21599 CIART, CHRONO, GM129; circadian-associated transcriptional repressor
D K22145 TMEM18; transmembrane protein 18
D K22543 MN1; transcriptional activator MN1
D K22758 CHCHD2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2
D K06053 RBPSUH, RBPJK; recombining binding protein suppressor of hairless
D K23804 GON4L; GON-4-like protein
D K21772 PURA; transcriptional activator protein Pur-alpha
D K21799 PURB; transcriptional activator protein Pur-beta
D K24992 MYEF2; myelin expression factor 2
D K23408 CDCA7, CDCA7L, JPO1; cell division cycle-associated protein 7
D K26458 NKRF; NF-kappa-B-repressing factor
D K14514 EIN3; ethylene-insensitive protein 3
D K11215 STE12; transcription factor STE12
D K12413 WHI5; G1-specific transcriptional repressor WHI5
D K12764 IME1; meiosis-inducing protein 1
D K12779 SUM1; suppressor of MAR1-1 protein
D K19815 HOT1; high-osmolarity-induced transcription protein 1
D K19816 MSS11; transcription activator MSS11
D K21631 GTI1, PAC2, WOR1; Gti1/Pac2 family transcription factor
D K12763 EFG1, SOK2; enhanced filamentous growth protein 1
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D K03490 chbR, celD; AraC family transcriptional regulator, dual regulator of chb operon
D K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D K05372 ybtA; AraC family transcriptional regulator
D K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD
D K07780 appY; AraC family transcriptional regulator, transcriptional regulator required for anaerobic and stationary phase induction of genes
D K10923 tcpN, toxT; AraC family transcriptional regulator, TCP pilus virulence regulatory protein
D K11920 envY; AraC family transcriptional regulator
D K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D K19056 tetD; AraC family transcriptional regulator, transposon Tn10 TetD protein
D K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D K21747 alkR; AraC family transcriptional regulator, alkane utilization regulator
D K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D K13652 K13652; AraC family transcriptional regulator
D K13653 K13653; AraC family transcriptional regulator
D K07506 K07506; AraC family transcriptional regulator
D K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
C LysR family
D K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator
D K25882 syrM; LysR family transcriptional regulator, transcriptional activator of nodD3 and syrA
D K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D K18927 lldR; LysR family transcriptional regulator, L-lactate utilization regulator
D K19242 citR; LysR family transcriptional regulator, repressor for citA
D K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D K19555 spvR; LysR family transcriptional regulator, spv operon transcriptional activator
D K19618 fitG; LysR family transcriptional regulator, activator of insecticidal toxin
D K19624 phcA; LysR family transcriptional regulator, virulence genes transcriptional regulator
D K19735 mvfR, pqsR; LysR family transcriptional regulator, quorum-sensing system regulator MvfR
D K21645 hypT, qseD; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D K21703 cbbR, cmpR, ndhR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD
D K21756 catM; LysR family transcriptional regulator, cis,cis-muconate-responsive activator of cat and ben genes
D K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D K21959 ftsR; LysR family transcriptional regulator, cell division regulator
D K22711 pltR; LysR family transcriptional regulator, pyoluteorin biosynthesis regulator
D K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
D K26290 palR; LysR family transcriptional regulator, regulator of pal gene cluster
D K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
D K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon
C DeoR family
D K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D K03436 fruR2, fruR; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D K02468 srlR, gutR; DeoR family transcriptional regulator, glucitol operon repressor
D K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
D K20271 accR; DeoR family transcriptional regulator, repressor of opine catabolism and conjugal transfer
D K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
D K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor
D K09012 sufR; DeoR family transcriptional regulator, suf operon transcriptional repressor
C LacI family
D K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D K03435 fruR1, fruR; LacI family transcriptional regulator, fructose operon transcriptional repressor
D K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D K06146 idnR, gntH; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator
D K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor
C GntR family
D K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D K03486 treR2, treR; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D K11922 mngR, farR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D K24966 gamR; GntR family transcriptional regulator, amino sugar utilization regulator
D K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D K24968 phnF; GntR family transcriptional regulator, repressor of the phnDCE operon
D K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D K03710 K03710; GntR family transcriptional regulator
D K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC
D K07978 plmA; GntR family transcriptional regulator
D K07979 ytrA; GntR family transcriptional regulator
D K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
D K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
D K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
C TetR/AcrR family
D K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D K19047 tetC; TetR/AcrR family transcriptional regulator, repressor of tetCD
D K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D K03577 acrR, smeT; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D K05501 slmA, ttk; TetR/AcrR family transcriptional regulator
D K09017 rutR; TetR/AcrR family transcriptional regulator
D K10913 hapR, luxR, litR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D K13770 ysiA, fadR; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC
D K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D K18137 adeN; TetR/AcrR family transcriptional regulator, repressor of the adeIJK operon
D K18140 envR, acrS; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D K18905 ameR, rmiR; TetR/AcrR family transcriptional regulator, repressor of the ameABC operon
D K18937 lfrR; TetR/AcrR family transcriptional regulator, repressor for lfrA
D K18938 qacR; TetR/AcrR family transcriptional regulator, repressor for qacA
D K18939 lmrA, yxaF; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor
D K18992 cmeR; TetR/AcrR family transcriptional regulator, cmeABC operon repressor
D K19060 mphR; TetR/AcrR family transcriptional regulator, macrolide resistance operon repressor
D K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D K20325 fhrR; TetR/AcrR family transcriptional regulator, Clp-modulated transcription factor
D K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor
D K21961 ethR, etaR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D K22106 fatR, bscR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator
D K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system
D K27107 mce3R; TetR/AcrR family transcriptional regulator, mce3 operon repressor
D K22295 K22295; TetR/AcrR family transcriptional regulator, repressor for neighboring sulfatase
D K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K06154 lysM; Lrp/AsnC family transcriptional regulator, involved in the regulation of lysine biosynthesis
D K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D K05800 decR, cyuR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon
C LuxR family
D K15852 luxR, vanR; LuxR family transcriptional regulator, transcriptional activator of the bioluminescence operon
D K18304 lasR; LuxR family transcriptional regulator, quorum-sensing system regulator LasR
D K18099 rhlR, phzR; LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
D K18098 bjaR1, rpaR, rhiR; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D K19666 solR, cepR, tofR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D K20540 cepR2; LuxR family transcriptional regulator, quorum-sensing system regulator CepR2
D K19731 cciR; LuxR family transcriptional regulator, quorum-sensing system regulator CciR
D K19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids
D K19733 sinR, avsR; LuxR family transcriptional regulator, quorum-sensing system regulator SinR
D K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D K20252 cinR; LuxR family transcriptional regulator, quorum-sensing system regulator CinR
D K20253 bisR; LuxR family transcriptional regulator, quorum-sensing system regulator BisR
D K21697 vjbR; LuxR family transcriptional regulator, quorum-sensing system regulator VjbR
D K21963 ecpR, matA; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
D K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
D K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons
D K20334 cviR; LuxR family transcriptional regulator, quorum-sensing system regulator CviR
D K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D K24912 ramR, amfR; LuxR family transcriptional regulator, transcriptional activator for aerial hyphae formation
D K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D K21748 alkS; LuxR family transcriptional regulator, alkane degradation pathway regulator
D K16247 gutR; LuxR family transcriptional regulator, glucitol operon activator
D K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
C MarR family
D K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr
D K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D K15974 emrR, mprA; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D K18131 mexR; MarR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D K20338 rot; MarR family transcriptional regulator, global regulator for virulence
D K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator
D K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D K25883 expG, wggR; MarR family transcriptional regulator, exopolysaccharide II synthesis transcriptional activator
C MerR family
D K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D K11923 cueR; MerR family transcriptional regulator, copper efflux regulator
D K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene
D K19592 golS; MerR family transcriptional regulator, gold-responsive activator of gol and ges genes
D K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D K21743 mta; MerR family transcriptional regulator, multidrug-efflux activator
D K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
D K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
D K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
C Fur family
D K03711 fur, zur, furB; Fur family transcriptional regulator, ferric uptake regulator
D K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D K02076 zurR, zur; Fur family transcriptional regulator, zinc uptake regulator
D K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D K09826 irr; Fur family transcriptional regulator, iron response regulator
C IclR family
D K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor
D K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D K21827 arcR; IclR family transcriptional regulator, arginine deiminase pathway regulator
C CRP/FNR family
D K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB
D K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
D K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator
D K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator
D K21558 cprK; CRP/FNR family transcriptional regulator, reductive dehalogenation system regulator
D K21560 prfA; CRP/FNR family transcriptional regulator, listeriolysin regulatory protein
D K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D K21884 cmr; CRP/FNR family transcriptional regulator, cAMP and macrophage regulator
D K22490 ldrP; CRP/FNR family transcriptional regulator, LitR-dependent transcriptional activator
D K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator
D K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB
C ArsR family
D K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
D K21903 cadC, smtB; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D K07721 K07721; ArsR family transcriptional regulator
C XRE family
D K15546 boxR, bzdR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation
D K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator
D K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D K19417 slrR; XRE family transcriptional regulator, biofilm formation regulator
D K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
D K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D K26740 vanR; PadR family transcriptional regulator, regulator of vanillate utilization
D K26741 ladR; PadR family transcriptional regulator, multidrug transcriptional repressor LadR
D K26742 lmrR; PadR family transcriptional regulator, multidrug transcriptional repressor LmrR
D K26743 pex; PadR family transcriptional regulator, circadian period extender
D K23305 gvpE; PadR family transcriptional regulator, activator of gas vesicle formation
D K10947 K10947; PadR family transcriptional regulator
C Other families
D K26252 dtxR, ideR; DtxR family transcriptional regulator, iron-dependent repressor
D K03709 troR, sirR, scaR, mntR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D K23238 rpiR, alsR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D K02546 mecI; BlaI family transcriptional regulator, methicillin resistance regulatory protein
D K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D K07724 ner, nlp, sfsB; Ner family transcriptional regulator
D K11925 sgrR; SgrR family transcriptional regulator
D K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D K20480 nprR, nprA; HTH-type transcriptional regulator, quorum sensing regulator NprR
D K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D K20391 plcR; HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
D K20375 ropB, rgg1; HTH-type transcriptional regulator, pheromone-responsive regulator
D K20380 traA; HTH-type transcriptional regulator, pheromone-responsive repressor
D K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D K20388 cylR2; HTH-type transcriptional regulator, cytolysin regulator
D K20377 prgX; HTH-type transcriptional regulator, major conjugation operon repressor
D K21557 susR; HTH-type transcriptional regulator, polysaccharide utilization system transcription regulator
D K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI
D K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator
D K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D K06930 bat; HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
D K23348 dmsR; HTH-type transcriptional regulator, dimethyl sulfoxide reductase transcription regulator
D K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator
D K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D K26599 gfcR; HTH-type transcriptional regulator, activator of D-glucose/D-fructose catabolism
D K10941 flrA, fleQ, flaK; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D K18219 txr; sigma-54 dependent transcriptional regulator, tetracycline resistant transcriptional regulator
D K20919 vpsR, cpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D K17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
D K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D K11908 vasH; sigma-54 dependent transcriptional regulator
D K11917 sfa3; sigma-54 dependent transcriptional regulator
D K11914 sfa2; sigma-54 dependent transcriptional regulator
D K26990 rsoA; sigma-O factor regulatory protein RsoA
D K12146 hyfR; hydrogenase-4 transcriptional activator
D K12266 norR; anaerobic nitric oxide reductase transcription regulator
D K15836 fhlA; formate hydrogenlyase transcriptional activator
D K02584 nifA; Nif-specific regulatory protein
D K02647 cdaR; carbohydrate diacid regulator
D K06714 rocR; arginine utilization regulatory protein
D K02019 modE; molybdate transport system regulatory protein
D K01926 rex; redox-sensing transcriptional repressor
D K03706 codY; transcriptional pleiotropic repressor
D K17071 dcmR; transcriptional repressor of dcmA and dcmR
D K07725 csa3; CRISPR-associated protein Csa3
D K21829 dauR; D-arginine utilization repressor
D K27097 espR; ESX-1-secreted protein regulator
D K07726 K07726; putative transcriptional regulator
D K07727 K07727; putative transcriptional regulator
D K07728 K07728; putative transcriptional regulator
D K07729 K07729; putative transcriptional regulator
D K07730 K07730; putative transcriptional regulator
D K07731 K07731; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
D K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D K03488 licT, bglG; beta-glucoside operon transcriptional antiterminator
D K26931 sacY; levansucrase and sucrase synthesis operon transcriptional antiterminator
D K26932 sacT; sacPA operon transcriptional antiterminator
D K03480 glcT; transcriptional antiterminator
D K03493 bglG1; transcriptional antiterminator
D K03483 mtlR; mannitol operon transcriptional activator
D K02538 manR; mannose operon transcriptional activator
D K03491 licR; probable licABCH operon transcriptional regulator
D K18531 frvR; putative frv operon regulatory protein
D K22976 atxA; anthrax toxin expression trans-acting positive regulator
D K22977 acpA; capsule synthesis positive regulator AcpA
D K22980 acpB; capsule synthesis positive regulator AcpB
C Others
D K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D K18956 whiB5; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D K18957 whiB6; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D K19343 nirI; NosR/NirI family transcriptional regulator, nitrite reductase regulator
D K21559 cprC; NosR/NirI family transcriptional regulator, putative reductive dehalogenation system regulator
D K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D K21600 csoR, ricR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D K06284 abrB, abh; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D K21696 rcoM; LytTR family transcriptional regulator, CO-responsive transcriptional regulator RcoM
D K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D K03497 parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein
D K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225]
D K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D K25884 mucR, rosR; MucR family transcriptional regulator, transcriptional regulator of exopolysaccharide biosynthesis
D K02443 glpP; glycerol uptake operon antiterminator
D K02531 lacT; transcriptional antiterminator
D K05785 rfaH; transcriptional antiterminator RfaH
D K03402 argR, ahrC; transcriptional regulator of arginine metabolism
D K02565 nagC; N-acetylglucosamine repressor
D K15545 mlc; transcriptional regulator of PTS gene
D K02562 mtlR; mannitol operon repressor
D K03705 hrcA; heat-inducible transcriptional repressor
D K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D K03708 ctsR; transcriptional regulator of stress and heat shock response
D K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D K03765 cadC; transcriptional activator of cad operon
D K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D K03567 gcvR; glycine cleavage system transcriptional repressor
D K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D K03974 pspF; psp operon transcriptional activator
D K03973 pspC; phage shock protein C
D K05311 cggR; central glycolytic genes regulator
D K05346 deoR; deoxyribonucleoside regulator
D K11531 lsrR; lsr operon transcriptional repressor
D K05519 med; transcriptional activator of comK gene
D K05880 dhaR; transcriptional activator for dhaKLM operon
D K06140 rnk; regulator of nucleoside diphosphate kinase
D K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D K06314 rsfA; prespore-specific regulator
D K06315 splA; transcriptional regulator of the spore photoproduct lyase operon
D K07733 alpA; prophage regulatory protein
D K07734 paiB; transcriptional regulator
D K07735 algH; putative transcriptional regulator
D K08277 caiF; transcriptional activator CaiF
D K06204 dksA; RNA polymerase-binding transcription factor
D K07738 nrdR; transcriptional repressor NrdR
D K09683 hutP; hut operon positive regulatory protein
D K11926 crl; sigma factor-binding protein Crl
D K12296 comX1_2; competence protein ComX
D K02250 comK; competence protein ComK
D K14414 rtcR; transcriptional regulatory protein RtcR
D K19667 xpsR; transcriptional activator of eps genes
D K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D K23306 brz; bacteriorhodopsin-regulating zinc finger protein
D K03925 mraZ; transcriptional regulator MraZ
D K08088 fimY; fimbrial regulator
D K25885 exoR; exopolysaccharide production negative regulator
D K07471 ygiV; probable transcriptional regulator
D K26991 yvrL; membrane-bound negative regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0