+D GENES KO #

  KEGG Orthology (KO) - Komagataella phaffii

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ppa00010] D PAS_chr4_0624 Non-essential protein of unknown function required for transcriptional induction K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0447 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_1192 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0561 Hexokinase-2 K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_0456 Glycolytic enzyme phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAS_chr2-1_0402 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-4_0047 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr3_0868 Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAS_chr1-1_0072 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAS_chr1-1_0319 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAS_chr3_0951 Triose phosphate isomerase, abundant glycolytic enzyme K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PAS_chr2-1_0437 Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAS_chr1-4_0292 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PAS_chr3_0693 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr3_0826 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr3_0082 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAS_chr2-1_0769 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAS_chr2-2_0294 E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D PAS_chr1-4_0593 E1 beta subunit of the pyruvate dehydrogenase (PDH) complex K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D PAS_chr1-1_0050 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr3_0188 Major of three pyruvate decarboxylase isozymes K01568 PDC; pyruvate decarboxylase [EC:4.1.1.1] D PAS_chr3_1028 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAS_chr2-1_0472 Mitochondrial alcohol dehydrogenase isozyme III K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAS_chr4_0576 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-1_0357 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0403 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-1_0767 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr1-4_0264 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr2-1_0771 Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr1-4_0042 Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase) K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D PAS_FragB_0061 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:ppa00020] D PAS_chr1-1_0475 hypothetical protein K01647 CS; citrate synthase [EC:2.3.3.1] D PAS_chr1-3_0104 Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitoc K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PAS_chr1-1_0233 Mitochondrial NADP-specific isocitrate dehydrogenase, catalyzes the oxidation of isocitrate K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAS_chr2-1_0580 Cytosolic NADP-specific isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAS_chr2-1_0120 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D PAS_chr4_0580 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D PAS_chr2-1_0089 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PAS_chr1-3_0094 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr3_0831 Alpha subunit of succinyl-CoA ligase K01899 LSC1; succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5] D PAS_chr2-2_0407 Beta subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle K01900 LSC2; succinyl-CoA synthetase beta subunit [EC:6.2.1.4 6.2.1.5] D PAS_chr4_0733 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) K00234 SDHA; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1] D PAS_chr3_1111 Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) K00235 SDHB; succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1] D PAS_chr1-4_0487 hypothetical protein K00236 SDHC; succinate dehydrogenase (ubiquinone) cytochrome b560 subunit D PAS_chr3_0424 Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) K00237 SDHD; succinate dehydrogenase (ubiquinone) membrane anchor subunit D PAS_chr2-2_0283 Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) K00237 SDHD; succinate dehydrogenase (ubiquinone) membrane anchor subunit D PAS_chr3_0647 Fumarase, converts fumaric acid to L-malic acid in the TCA cycle K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PAS_chr2-1_0238 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate K00026 MDH2; malate dehydrogenase [EC:1.1.1.37] D PAS_chr4_0815 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate K00026 MDH2; malate dehydrogenase [EC:1.1.1.37] D PAS_chr2-2_0024 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D PAS_FragB_0061 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PAS_chr2-2_0294 E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D PAS_chr1-4_0593 E1 beta subunit of the pyruvate dehydrogenase (PDH) complex K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D PAS_chr1-1_0050 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ppa00030] D PAS_chr3_0456 Glycolytic enzyme phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAS_chr2-1_0308 Glucose-6-phosphate dehydrogenase (G6PD), catalyzes the first step of the pentose phosphate pathway K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAS_chr1-1_0277 Protein with a possible role in tRNA export K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D PAS_chr3_1126 6-phosphogluconolactonase, catalyzes the second step of the pentose phosphate pathway K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D PAS_chr3_0277 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PAS_chr1-4_0150 Transketolase, similar to Tkl2p K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAS_chr2-2_0337 Transaldolase, enzyme in the non-oxidative pentose phosphate pathway K00616 TALDO1; transaldolase [EC:2.2.1.2] D PAS_chr2-2_0338 Transaldolase, enzyme in the non-oxidative pentose phosphate pathway K00616 TALDO1; transaldolase [EC:2.2.1.2] D PAS_chr4_0213 Ribose-5-phosphate ketol-isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D PAS_chr4_0212 Ribose-5-phosphate ketol-isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D PAS_chr3_0604 Putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D PAS_chr1-4_0264 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr2-1_0771 Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr2-2_0174 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAS_chr1-1_0006 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAS_chr1-1_0436 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAS_chr3_0062 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAS_chr1-4_0669 hypothetical protein K00851 idnK; gluconokinase [EC:2.7.1.12] D PAS_chr1-1_0072 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAS_chr1-1_0319 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAS_chr3_0868 Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAS_chr2-1_0402 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-4_0047 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:ppa00040] D PAS_chr4_0572 hypothetical protein K18102 GAAB; L-galactonate dehydratase [EC:4.2.1.146] D PAS_chr1-3_0122 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAS_chr4_0576 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-1_0357 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-1_0280 Xylulokinase, converts D-xylulose and ATP to xylulose 5-phosphate and ADP K00854 xylB; xylulokinase [EC:2.7.1.17] D PAS_chr3_0744 Aldose reductase involved in methylglyoxal, D-xylose and arabinose metabolism K17743 XYL1; D-xylose reductase [EC:1.1.1.307 1.1.1.430 1.1.1.431] D PAS_chr2-2_0019 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation K17738 ARD; D-arabinitol 2-dehydrogenase [EC:1.1.1.250] D PAS_chr1-1_0490 hypothetical protein K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9] D PAS_chr2-2_0305 Putative kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:ppa00051] D PAS_chr3_1115 Mannose-6-phosphate isomerase, catalyzes the interconversion of fructose-6-P and mannose-6-P K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PAS_chr2-2_0053 Phosphomannomutase, involved in synthesis of GDP-mannose and dolichol-phosphate-mannose K17497 PMM; phosphomannomutase [EC:5.4.2.8] D PAS_chr3_0870 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PAS_chr2-1_0093 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PAS_chr4_0338 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation K18337 LRA1; L-rhamnose 1-dehydrogenase [EC:1.1.1.378 1.1.1.377 1.1.1.173] D PAS_chr4_0339 hypothetical protein K18338 LRA2; L-rhamnono-1,4-lactonase [EC:3.1.1.65] D PAS_chr1-4_0075 L-rhamnonate dehydratase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90] D PAS_chr4_0341 hypothetical protein K18339 LRA4; 2-keto-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53] D PAS_chr4_0577 hypothetical protein K18339 LRA4; 2-keto-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53] D PAS_chr1-1_0356 hypothetical protein K18339 LRA4; 2-keto-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53] D PAS_chr4_0624 Non-essential protein of unknown function required for transcriptional induction K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0447 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_1192 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0561 Hexokinase-2 K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr2-1_0402 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-4_0047 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr3_0868 Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAS_chr2-1_0110 Fructose-2,6-bisphosphatase, required for glucose metabolism K19029 PFKFB2; 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 2 [EC:2.7.1.105 3.1.3.46] D PAS_chr4_0266 Similar to 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase enzymes K19030 PFKFB4; 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 4 [EC:2.7.1.105 3.1.3.46] D PAS_FragB_0064 6-phosphofructo-2-kinase K00900 E2.7.1.105; 6-phosphofructo-2-kinase [EC:2.7.1.105] D PAS_chr2-2_0060 6-phosphofructo-2-kinase, inhibited by phosphoenolpyruvate and sn-glycerol 3-phosphate, has negligib K00900 E2.7.1.105; 6-phosphofructo-2-kinase [EC:2.7.1.105] D PAS_chr2-1_0870 hypothetical protein K00900 E2.7.1.105; 6-phosphofructo-2-kinase [EC:2.7.1.105] D PAS_chr4_0754 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation K17742 SOU1; sorbose reductase [EC:1.1.1.289] D PAS_chr4_0988 hypothetical protein K17742 SOU1; sorbose reductase [EC:1.1.1.289] D PAS_chr1-1_0072 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAS_chr1-1_0319 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAS_chr3_0951 Triose phosphate isomerase, abundant glycolytic enzyme K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:ppa00052] D PAS_chr1-3_0122 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAS_chr1-4_0264 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr2-1_0771 Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr4_0624 Non-essential protein of unknown function required for transcriptional induction K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0447 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_1192 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0561 Hexokinase-2 K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_0231 hypothetical protein K18819 GOLS; inositol 3-alpha-galactosyltransferase [EC:2.4.1.123] D PAS_chr2-1_0402 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-4_0047 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism [PATH:ppa00053] D PAS_chr2-1_0051 hypothetical protein K00469 MIOX; inositol oxygenase [EC:1.13.99.1] D PAS_chr4_0576 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-1_0357 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0775 NAD-dependent arabinose dehydrogenase, involved in biosynthesis of erythroascorbic acid K00062 ARA2; D-arabinose 1-dehydrogenase [EC:1.1.1.116] D PAS_chr2-1_0197 D-Arabinono-1,4-lactone oxidase, catalyzes the final step in biosynthesis of D-erythroascorbic acid K00107 ALO; D-arabinono-1,4-lactone oxidase [EC:1.1.3.37] C 00500 Starch and sucrose metabolism [PATH:ppa00500] D PAS_chr1-3_0122 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAS_chr2-1_0661 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr2-1_0263 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr1-3_0225 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr2-1_0454 Major exo-1,3-beta-glucanase of the cell wall, involved in cell wall beta-glucan assembly K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D PAS_chr1-4_0426 Endo-beta-1,3-glucanase, major protein of the cell wall, involved in cell wall maintenance K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D PAS_chr4_0692 Sporulation-specific exo-1,3-beta-glucanase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D PAS_chr4_0013 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PAS_chr3_0781 Glycogen synthase, similar to Gsy1p K00693 GYS; glycogen synthase [EC:2.4.1.11] D PAS_chr4_0847 Self-glucosylating initiator of glycogen synthesis, also glucosylates N-dodecyl-beta-D-maltoside K00750 GYG1; glycogenin [EC:2.4.1.186] D PAS_chr2-1_0173 Non-essential glycogen phosphorylase required for the mobilization of glycogen, activity is regulate K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PAS_chr2-2_0437 Glycogen debranching enzyme containing glucanotranferase and alpha-1,6-amyloglucosidase activities K01196 AGL; glycogen debranching enzyme [EC:2.4.1.25 3.2.1.33] D PAS_chr4_0579 Intracellular sporulation-specific glucoamylase involved in glycogen degradation K01178 SGA1; glucoamylase [EC:3.2.1.3] D PAS_c131_0017 hypothetical protein K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D PAS_chr1-3_0054 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D PAS_chr2-1_0739 Regulatory subunit of trehalose-6-phosphate synthase/phosphatase complex K22337 TSL1; trehalose 6-phosphate synthase complex regulatory subunit D PAS_chr4_0816 Neutral trehalase, degrades trehalose K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D PAS_chr1-4_0264 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr2-1_0771 Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr4_0624 Non-essential protein of unknown function required for transcriptional induction K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0447 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_1192 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0561 Hexokinase-2 K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_0456 Glycolytic enzyme phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppa00520] D PAS_chr3_0107 Sporulation-specific chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D PAS_chr1-1_0103 Chitin deacetylase, together with Cda1p involved in the biosynthesis ascospore wall component K01452 E3.5.1.41; chitin deacetylase [EC:3.5.1.41] D PAS_chr4_0624 Non-essential protein of unknown function required for transcriptional induction K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0447 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_1192 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0561 Hexokinase-2 K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr2-1_0626 Glutamine-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAS_chr4_0060 Evolutionarily conserved glucosamine-6-phosphate acetyltransferase K00621 GNPNAT1; glucosamine-phosphate N-acetyltransferase [EC:2.3.1.4] D PAS_chr1-1_0067 Essential N-acetylglucosamine-phosphate mutase K01836 PGM3; phosphoacetylglucosamine mutase [EC:5.4.2.3] D PAS_chr3_0676 UDP-N-acetylglucosamine pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D PAS_chr4_0149 Microsomal cytochrome b reductase K00326 CYB5R; cytochrome-b5 reductase [EC:1.6.2.2] D PAS_chr4_0737 Mitochondrial NADH-cytochrome b5 reductase, involved in ergosterol biosynthesis K00326 CYB5R; cytochrome-b5 reductase [EC:1.6.2.2] D PAS_chr2-1_0199 Essential protein required for maturation of Gas1p and Pho8p, proposed to be involved in protein tra K00326 CYB5R; cytochrome-b5 reductase [EC:1.6.2.2] D PAS_chr1-1_0393 Chitin synthase I K00698 CHS1; chitin synthase [EC:2.4.1.16] D PAS_chr2-2_0094 Chitin synthase II K00698 CHS1; chitin synthase [EC:2.4.1.16] D PAS_chr2-1_0065 Chitin synthase III, catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin K00698 CHS1; chitin synthase [EC:2.4.1.16] D PAS_chr1-4_0264 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr2-1_0771 Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr1-3_0122 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAS_chr3_0456 Glycolytic enzyme phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAS_chr3_1115 Mannose-6-phosphate isomerase, catalyzes the interconversion of fructose-6-P and mannose-6-P K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PAS_chr2-2_0053 Phosphomannomutase, involved in synthesis of GDP-mannose and dolichol-phosphate-mannose K17497 PMM; phosphomannomutase [EC:5.4.2.8] D PAS_chr3_0870 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PAS_chr2-1_0093 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:ppa00620] D PAS_chr3_0403 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-1_0767 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-2_0294 E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D PAS_chr1-4_0593 E1 beta subunit of the pyruvate dehydrogenase (PDH) complex K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D PAS_chr1-1_0050 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr2-1_0472 Mitochondrial alcohol dehydrogenase isozyme III K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAS_chr3_1028 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAS_chr4_0576 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-1_0357 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr2-1_0769 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAS_chr1-4_0249 Acetyl-CoA carboxylase, biotin containing enzyme K11262 ACACA; acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14 2.1.3.15] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0253 Acetyl-coA hydrolase K01067 E3.1.2.1; acetyl-CoA hydrolase [EC:3.1.2.1] D PAS_chr4_0272 Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D PAS_chr3_1021 D-lactate dehydrogenase, oxidizes D-lactate to pyruvate, transcription is heme-dependent K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D PAS_chr3_0674 D-lactate dehydrogenase, located in the mitochondrial matrix K21618 DLD3; (R)-2-hydroxyglutarate---pyruvate transhydrogenase [EC:1.1.99.40] D PAS_chr3_0447 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0446 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0448 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0449 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0014 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr4_0336 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr4_0842 Monomeric glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D PAS_chr3_0783 Cytoplasmic glyoxalase II K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PAS_chr3_0181 Mitochondrial malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PAS_chr2-2_0024 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D PAS_chr2-1_0238 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate K00026 MDH2; malate dehydrogenase [EC:1.1.1.37] D PAS_chr4_0815 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate K00026 MDH2; malate dehydrogenase [EC:1.1.1.37] D PAS_chr3_0647 Fumarase, converts fumaric acid to L-malic acid in the TCA cycle K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PAS_FragB_0061 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PAS_chr4_0191 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D PAS_chr1-4_0459 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr2-1_0415 Alpha-isopropylmalate synthase (2-isopropylmalate synthase) K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PAS_chr1-1_0313 Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate K01655 LYS21; homocitrate synthase [EC:2.3.3.14] D PAS_chr1-4_0421 Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate K01655 LYS21; homocitrate synthase [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppa00630] D PAS_chr1-4_0338 Isocitrate lyase, catalyzes the formation of succinate and glyoxylate from isocitrate K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D PAS_chr3_0403 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-1_0767 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr4_0191 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D PAS_chr1-4_0459 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D PAS_chr2-1_0238 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate K00026 MDH2; malate dehydrogenase [EC:1.1.1.37] D PAS_chr4_0815 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate K00026 MDH2; malate dehydrogenase [EC:1.1.1.37] D PAS_chr1-1_0475 hypothetical protein K01647 CS; citrate synthase [EC:2.3.3.1] D PAS_chr1-3_0104 Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitoc K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr2-2_0131 Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1 K03781 katE; catalase [EC:1.11.1.6] D PAS_chr4_0593 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D PAS_chr4_0416 Alanine:glyoxylate aminotransferase (AGT), catalyzes the synthesis of glycine from glyoxylate K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PAS_chr4_0785 Glutamine synthetase (GS), synthesizes glutamine from glutamate and ammonia K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAS_chr4_0415 Cytosolic serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_chr4_0587 Mitochondrial serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_FragB_0053 Glycine dehydrogenase [decarboxylating], mitochondrial K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAS_chr2-2_0492 hypothetical protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_FragB_0009 H subunit of the mitochondrial glycine decarboxylase complex K02437 gcvH; glycine cleavage system H protein D PAS_chr4_0938 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D PAS_chr3_0932 NAD(+)-dependent formate dehydrogenase, may protect cells from exogenous formate K00122 FDH; formate dehydrogenase [EC:1.17.1.9] C 00640 Propanoate metabolism [PATH:ppa00640] D PAS_chr3_0403 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-1_0767 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr1-4_0538 Fatty-acyl coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAS_chr2-1_0776 Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway K14729 FOX2; multifunctional beta-oxidation protein [EC:4.2.1.- 1.1.1.-] D PAS_chr3_0937 3-hydroxyisobutyryl-CoA hydrolase, member of a family of enoyl-CoA hydratase/isomerases K05605 HIBCH; 3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4] D PAS_chr1-4_0249 Acetyl-CoA carboxylase, biotin containing enzyme K11262 ACACA; acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14 2.1.3.15] D PAS_chr2-1_0107 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobu K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr4_0677 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr3_0831 Alpha subunit of succinyl-CoA ligase K01899 LSC1; succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5] D PAS_chr2-2_0407 Beta subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle K01900 LSC2; succinyl-CoA synthetase beta subunit [EC:6.2.1.4 6.2.1.5] D PAS_chr4_0470 Mitochondrial aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAS_chr3_0447 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0446 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0448 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0449 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0014 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr4_0336 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] C 00650 Butanoate metabolism [PATH:ppa00650] D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr2-2_0452 hypothetical protein K00109 L2HGDH; 2-hydroxyglutarate dehydrogenase [EC:1.1.99.2] D PAS_chr2-1_0343 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D PAS_chr3_0965 Glutamate decarboxylase, converts glutamate into gamma-aminobutyric acid (GABA) K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D PAS_chr2-1_0107 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobu K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr4_0677 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr1-3_0024 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAS_chr2-1_0191 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-Co K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D PAS_chr2-1_0313 Bifunctional enzyme with alcohol dehydrogenase and glutathione-dependent formaldehyde dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D PAS_chr4_0228 Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAS_chr2-1_0864 hypothetical protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ppa00660] D PAS_chr4_0228 Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAS_chr2-1_0864 hypothetical protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAS_chr3_0039 Beta-isopropylmalate dehydrogenase (IMDH), catalyzes the third step in the leucine biosynthesis path K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ppa00562] D PAS_chr4_0478 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137] D PAS_chr3_0354 Phosphatidylinositol 3-phosphate [PI(3)P] phosphatase K18083 MTMR6_7_8; myotubularin-related protein 6/7/8 [EC:3.1.3.64 3.1.3.95] D PAS_chr1-3_0100 Phosphatidylinositol-4-kinase that functions in the Pkc1p protein kinase pathway K00888 PI4KA; phosphatidylinositol 4-kinase A [EC:2.7.1.67] D PAS_chr1-4_0380 Phosphatidylinositol 4-kinase K19801 PI4KB; phosphatidylinositol 4-kinase B [EC:2.7.1.67] D PAS_chr1-4_0143 Type II phosphatidylinositol 4-kinase that binds Las17p K13711 PI4K2; phosphatidylinositol 4-kinase type 2 [EC:2.7.1.67] D PAS_chr1-4_0617 Phosphatidylinositol (PI) phosphatase K21797 SAC1; phosphatidylinositol 4-phosphatase [EC:3.1.3.-] D PAS_chr1-1_0457 Phosphatidylinositol-4-phosphate 5-kinase K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68] D PAS_chr2-1_0178 Polyphosphatidylinositol phosphatase, dephosphorylates multiple phosphatidylinositols K20279 SYNJ; synaptojanin [EC:3.1.3.36] D PAS_chr2-1_0424 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sa K20279 SYNJ; synaptojanin [EC:3.1.3.36] D PAS_chr2-2_0351 hypothetical protein K01110 PTEN; phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [EC:3.1.3.16 3.1.3.48 3.1.3.67] D PAS_chr1-4_0456 Polyphosphatidylinositol phosphatase K22913 FIG4; phosphatidylinositol 3,5-bisphosphate 5-phosphatase [EC:3.1.3.-] D PAS_chr4_0700 Phospholipase C K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11] D PAS_chr4_0907 1-phosphatidylinositol phosphodiesterase K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13] D PAS_chr4_0730 Inositol monophosphatase, involved in biosynthesis of inositol K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAS_chr2-1_0695 Phosphatidylinositol synthase, required for biosynthesis of phosphatidylinositol K00999 CDIPT; CDP-diacylglycerol--inositol 3-phosphatidyltransferase [EC:2.7.8.11] D PAS_chr2-2_0113 Inositol 1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PAS_chr1-4_0293 Inositol polyphosphate multikinase (IPMK) K00915 IPMK; inositol-polyphosphate multikinase [EC:2.7.1.140 2.7.1.151] D PAS_chr3_0630 hypothetical protein K19786 IPK1; inositol-pentakisphosphate 2-kinase [EC:2.7.1.158] D PAS_chr2-1_0051 hypothetical protein K00469 MIOX; inositol oxygenase [EC:1.13.99.1] D PAS_chr4_0470 Mitochondrial aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAS_chr3_0951 Triose phosphate isomerase, abundant glycolytic enzyme K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ppa00190] D PAS_chr2-1_0456 hypothetical protein K03934 NDUFS1; NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:7.1.1.2] D PAS_chr3_0808 hypothetical protein K03935 NDUFS2; NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:7.1.1.2] D PAS_chr4_0120 hypothetical protein K03936 NDUFS3; NADH dehydrogenase (ubiquinone) Fe-S protein 3 [EC:7.1.1.2] D PAS_chr2-2_0366 hypothetical protein K03937 NDUFS4; NADH dehydrogenase (ubiquinone) Fe-S protein 4 D PAS_chr2-2_0235 hypothetical protein K03939 NDUFS6; NADH dehydrogenase (ubiquinone) Fe-S protein 6 D PAS_chr3_0585 hypothetical protein K03940 NDUFS7; NADH dehydrogenase (ubiquinone) Fe-S protein 7 [EC:7.1.1.2] D PAS_chr3_0619 hypothetical protein K03941 NDUFS8; NADH dehydrogenase (ubiquinone) Fe-S protein 8 [EC:7.1.1.2] D PAS_chr2-2_0462 hypothetical protein K03942 NDUFV1; NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:7.1.1.2] D PAS_chr2-1_0359 hypothetical protein K03943 NDUFV2; NADH dehydrogenase (ubiquinone) flavoprotein 2 [EC:7.1.1.2] D PAS_chr1-4_0575 NADH-ubiquinone oxidoreductase K03946 NDUFA2; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 D PAS_chr1-4_0371 hypothetical protein K03949 NDUFA5; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 D PAS_chr4_0535 hypothetical protein K03950 NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6 D PAS_chr4_0355 hypothetical protein K03952 NDUFA8; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8 D PAS_chr3_1188 hypothetical protein K03953 NDUFA9; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9 D PAS_chr3_1119 Mitochondrial matrix acyl carrier protein, involved in biosynthesis of octanoate K03955 NDUFAB1; NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein D PAS_chr1-3_0210 hypothetical protein K11352 NDUFA12; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12 D PAS_chr2-2_0035 hypothetical protein K11353 NDUFA13; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13 D PAS_chr2-2_0169 hypothetical protein K03959 NDUFB3; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 3 D PAS_chr1-1_0172 hypothetical protein K03963 NDUFB7; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7 D PAS_chr4_0142 hypothetical protein K03964 NDUFB8; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 8 D PAS_chr1-4_0039 hypothetical protein K03965 NDUFB9; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9 D PAS_chr1-4_0299 Mitochondrial external NADH dehydrogenase, a type II NAD(P)H:quinone oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D PAS_chr3_0792 Mitochondrial external NADH dehydrogenase, a type II NAD(P)H:quinone oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D PAS_chr4_0733 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) K00234 SDHA; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1] D PAS_chr3_1111 Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) K00235 SDHB; succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1] D PAS_chr1-4_0487 hypothetical protein K00236 SDHC; succinate dehydrogenase (ubiquinone) cytochrome b560 subunit D PAS_chr3_0424 Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) K00237 SDHD; succinate dehydrogenase (ubiquinone) membrane anchor subunit D PAS_chr2-2_0283 Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) K00237 SDHD; succinate dehydrogenase (ubiquinone) membrane anchor subunit D PAS_chr2-1_0850 hypothetical protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D PAS_chr3_0997 Cytochrome c1, component of the mitochondrial respiratory chain K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D PAS_chr1-1_0099 Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex) K00414 QCR1; ubiquinol-cytochrome c reductase core subunit 1 D PAS_chr2-2_0430 Subunit 2 of the ubiquinol cytochrome-c reductase complex K00415 QCR2; ubiquinol-cytochrome c reductase core subunit 2 D PAS_chr1-1_0217 hypothetical protein K00416 QCR6; ubiquinol-cytochrome c reductase subunit 6 D PAS_chr1-1_0322 Subunit 7 of the ubiquinol cytochrome-c reductase complex K00417 QCR7; ubiquinol-cytochrome c reductase subunit 7 D PAS_chr1-4_0313 Subunit 8 of ubiquinol cytochrome-c reductase complex K00418 QCR8; ubiquinol-cytochrome c reductase subunit 8 D PAS_chr4_0520 hypothetical protein K00419 QCR9; ubiquinol-cytochrome c reductase subunit 9 D PAS_chr2-1_0717 hypothetical protein K00420 QCR10; ubiquinol-cytochrome c reductase subunit 10 D PAS_chr1-3_0194 Heme A:farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D PAS_chr3_0615 Subunit Va of cytochrome c oxidase K02263 COX4; cytochrome c oxidase subunit 4 D PAS_chr3_0824 Subunit VI of cytochrome c oxidase K02264 COX5A; cytochrome c oxidase subunit 5a D PAS_chr2-1_0361 Subunit IV of cytochrome c oxidase K02265 COX5B; cytochrome c oxidase subunit 5b D PAS_chr2-1_0363 Subunit VIa of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membran K02266 COX6A; cytochrome c oxidase subunit 6a D PAS_chr4_0422 Subunit VIb of cytochrome c oxidase K02267 COX6B; cytochrome c oxidase subunit 6b D PAS_chr2-2_0265 hypothetical protein K02269 COX7; cytochrome c oxidase subunit 7 D PAS_chr2-1_0746 hypothetical protein K02269 COX7; cytochrome c oxidase subunit 7 D PAS_chr2-2_0266 Subunit VIII of cytochrome c oxidase K02272 COX7C; cytochrome c oxidase subunit 7c D PAS_chr2-1_0226 Mitochondrial inner membrane protein required for delivery of copper to the Cox1p subunit of cytochr K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D PAS_chr4_0449 Protein required for the hydroxylation of heme O to form heme A K02259 COX15; heme a synthase [EC:1.17.99.9] D PAS_chr3_0745 Cytochrome c oxidase assembly protein/Cu2+ chaperone K02260 COX17; cytochrome c oxidase assembly protein subunit 17 D PAS_chr4_0018 Cytochrome c, isoform 1 K08738 CYC; cytochrome c D PAS_chr3_0576 Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase K02132 ATPeF1A; F-type H+-transporting ATPase subunit alpha D PAS_chr2-2_0165 Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase K02133 ATPeF1B; F-type H+-transporting ATPase subunit beta [EC:7.1.2.2] D PAS_chr1-4_0465 Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase K02136 ATPeF1G; F-type H+-transporting ATPase subunit gamma D PAS_chr1-4_0445 Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase K02134 ATPeF1D; F-type H+-transporting ATPase subunit delta D PAS_chr2-1_0612 hypothetical protein K02135 ATPeF1E; F-type H+-transporting ATPase subunit epsilon D PAS_chr1-1_0191 Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase K02137 ATPeF0O; F-type H+-transporting ATPase subunit O D PAS_chr3_0460 Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase K02127 ATPeF0B; F-type H+-transporting ATPase subunit b D PAS_chr1-1_0484 hypothetical protein K02138 ATPeF0D; F-type H+-transporting ATPase subunit d D PAS_chr4_0892 mitochondrial ATP synthase K01549 TIM11; F-type H+-transporting ATP synthase subunit e D PAS_chr3_0059 Subunit f of the F0 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily cons K02139 ATPeFF; F-type H+-transporting ATPase subunit f D PAS_chr3_0819 Subunit g of the mitochondrial F1F0 ATP synthase K02140 ATPeFG; F-type H+-transporting ATPase subunit g D PAS_chr2-1_0451 hypothetical protein K02141 ATPeFH; F-type H+-transporting ATPase subunit h D PAS_chr2-1_0751 Subunit of the mitochondrial F1F0 ATP synthase K02142 ATPeFJ; F-type H+-transporting ATPase subunit j D PAS_chr3_0161 hypothetical protein K02143 ATPeFK; F-type H+-transporting ATPase subunit k D PAS_chr1-1_0309 Vacuolar ATPase V1 domain subunit A containing the catalytic nucleotide binding sites K02145 ATPeV1A; V-type H+-transporting ATPase subunit A [EC:7.1.2.2] D PAS_c131_0021 vacuolar ATP synthase subunit B K02147 ATPeV1B; V-type H+-transporting ATPase subunit B D PAS_chr2-1_0246 Subunit C of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) K02148 ATPeV1C; V-type H+-transporting ATPase subunit C D PAS_chr1-1_0195 Subunit D of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) K02149 ATPeV1D; V-type H+-transporting ATPase subunit D D PAS_chr3_0704 Subunit E of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) K02150 ATPeV1E; V-type H+-transporting ATPase subunit E D PAS_chr4_0674 Subunit F of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) K02151 ATPeV1F; V-type H+-transporting ATPase subunit F D PAS_chr4_0255 hypothetical protein K02152 ATPeV1G; V-type H+-transporting ATPase subunit G D PAS_chr4_0990 hypothetical protein K02144 ATPeV1H; V-type H+-transporting ATPase subunit H D PAS_chr3_1093 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) K02154 ATPeV0A; V-type H+-transporting ATPase subunit a D PAS_chr1-3_0066 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) K02154 ATPeV0A; V-type H+-transporting ATPase subunit a D PAS_chr3_1040 Proteolipid subunit of the vacuolar H(+)-ATPase V0 sector K02155 ATPeV0C; V-type H+-transporting ATPase 16kDa proteolipid subunit D PAS_chr2-1_0687 Vacuolar ATPase V0 domain subunit c', involved in proton transport activity K02155 ATPeV0C; V-type H+-transporting ATPase 16kDa proteolipid subunit D PAS_chr3_1236 hypothetical protein K03661 ATPeV0B; V-type H+-transporting ATPase 21kDa proteolipid subunit D PAS_chr2-2_0227 Subunit d of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase) K02146 ATPeV0D; V-type H+-transporting ATPase subunit d D PAS_chr3_0137 Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex K02153 ATPeV0E; V-type H+-transporting ATPase subunit e D PAS_chr1-1_0002 Plasma membrane H+-ATPase, pumps protons out of the cell K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D PAS_chr1-3_0028 Cytoplasmic inorganic pyrophosphatase (PPase) K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ppa00680] D PAS_chr4_0821 Alcohol oxidase K17066 MOX; alcohol oxidase [EC:1.1.3.13] D PAS_chr4_0152 hypothetical protein K17066 MOX; alcohol oxidase [EC:1.1.3.13] D PAS_chr3_1028 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAS_chr3_0867 Non-essential intracellular esterase that can function as an S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D PAS_chr3_0932 NAD(+)-dependent formate dehydrogenase, may protect cells from exogenous formate K00122 FDH; formate dehydrogenase [EC:1.17.1.9] D PAS_chr4_0415 Cytosolic serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_chr4_0587 Mitochondrial serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_chr4_0416 Alanine:glyoxylate aminotransferase (AGT), catalyzes the synthesis of glycine from glyoxylate K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PAS_chr3_0082 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAS_chr3_0832 Transketolase, similar to Tkl2p K17100 DAS; dihydroxyacetone synthase [EC:2.2.1.3] D PAS_chr3_0834 Transketolase, similar to Tkl2p K17100 DAS; dihydroxyacetone synthase [EC:2.2.1.3] D PAS_chr1-1_0072 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAS_chr1-1_0319 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAS_chr3_0868 Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAS_chr2-1_0402 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-4_0047 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr3_0403 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-1_0767 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr3_0693 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr3_0826 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr2-1_0657 3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAS_chr3_0566 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAS_chr4_0285 Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthes K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ppa00910] D PAS_chr2-1_0037 Nitrilase, member of the nitrilase branch of the nitrilase superfamily K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAS_chr2-1_0311 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PAS_chr1-1_0107 NADP(+)-dependent glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PAS_chr4_0785 Glutamine synthetase (GS), synthesizes glutamine from glutamate and ammonia K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAS_chr4_0578 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ppa00920] D PAS_chr1-4_0253 ATP sulfurylase, catalyzes the primary step of intracellular sulfate activation K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PAS_chr1-1_0323 Diadenosine 5',5''-P1,P4-tetraphosphate phosphorylase II (AP4A phosphorylase) K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53] D PAS_chr3_0667 Adenylylsulfate kinase, required for sulfate assimilation and involved in methionine metabolism K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PAS_chr2-1_0547 Bisphosphate-3'-nucleotidase, involved in salt tolerance and methionine biogenesis K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PAS_chr4_0369 Subunit alpha of assimilatory sulfite reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D PAS_chr3_1084 Sulfite reductase beta subunit, involved in amino acid biosynthesis, transcription repressed by meth K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D PAS_chr2-1_0698 Putative protein of unknown function with similarity to human thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAS_chr2-1_0862 hypothetical protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAS_chr1-3_0273 Putative cysteine synthase, localized to the mitochondrial outer membrane K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAS_chr4_0330 Methionine and cysteine synthase (O-acetyl homoserine-O-acetyl serine sulfhydrylase) K17069 MET17; O-acetylhomoserine/O-acetylserine sulfhydrylase [EC:2.5.1.49 2.5.1.47] D PAS_chr4_0865 L-homoserine-O-acetyltransferase, catalyzes the conversion of homoserine to O-acetyl homoserine K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PAS_chr2-1_0752 Cystathionine gamma-synthase, converts cysteine into cystathionine K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ppa00061] D PAS_chr1-4_0249 Acetyl-CoA carboxylase, biotin containing enzyme K11262 ACACA; acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14 2.1.3.15] D PAS_chr3_1119 Mitochondrial matrix acyl carrier protein, involved in biosynthesis of octanoate K03955 NDUFAB1; NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein D PAS_chr2-1_0224 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAS_chr1-1_0008 Beta subunit of fatty acid synthetase; catalyzes the synthesis of long-chain saturated fatty acids K00668 FAS1; fatty acid synthase subunit beta, fungi type [EC:2.3.1.86] D PAS_chr1-4_0295 Alpha subunit of fatty acid synthetase K00667 FAS2; fatty acid synthase subunit alpha, fungi type [EC:2.3.1.86] D PAS_chr4_0511 Mitochondrial beta-keto-acyl synthase with possible role in fatty acid synthesis K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAS_chr2-1_0856 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAS_chr3_0631 Mitochondrial 3-hydroxyacyl-thioester dehydratase involved in fatty acid biosynthesis K22541 HTD2; 3-hydroxyacyl-thioester dehydratase, fungi type [EC:4.2.1.-] D PAS_chr4_0311 2-enoyl thioester reductase, member of the medium chain dehydrogenase/reductase family K07512 MECR; mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase [EC:1.3.1.- 1.3.1.38] D PAS_chr2-1_0785 Long chain fatty acyl-CoA synthetase with a preference for C12:0-C16:0 fatty acids K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr4_0352 Long chain fatty acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation [PATH:ppa00062] D PAS_chr4_0311 2-enoyl thioester reductase, member of the medium chain dehydrogenase/reductase family K07512 MECR; mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase [EC:1.3.1.- 1.3.1.38] D PAS_chr2-2_0107 hypothetical protein K01074 PPT; palmitoyl-protein thioesterase [EC:3.1.2.22] D PAS_chr3_0602 Fatty acid elongase K10245 ELO2; fatty acid elongase 2 [EC:2.3.1.199] D PAS_chr3_0236 Elongase K10246 ELO3; fatty acid elongase 3 [EC:2.3.1.199] D PAS_chr4_0368 Microsomal beta-keto-reductase K10251 HSD17B12; 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:1.1.1.62 1.1.1.330] D PAS_chr3_0222 3-hydroxyacyl-CoA dehydratase K10703 HACD; very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:4.2.1.134] D PAS_chr4_0780 Enoyl reductase that catalyzes the last step in each cycle of very long chain fatty acid elongation K10258 TER; very-long-chain enoyl-CoA reductase [EC:1.3.1.93] C 00071 Fatty acid degradation [PATH:ppa00071] D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr2-2_0267 3-ketoacyl-CoA thiolase with broad chain length specificity K07513 ACAA1; acetyl-CoA acyltransferase 1 [EC:2.3.1.16] D PAS_chr1-4_0538 Fatty-acyl coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAS_chr2-1_0785 Long chain fatty acyl-CoA synthetase with a preference for C12:0-C16:0 fatty acids K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr4_0352 Long chain fatty acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr1-4_0663 hypothetical protein K13239 ECI2; Delta3-Delta2-enoyl-CoA isomerase [EC:5.3.3.8] D PAS_chr3_1028 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAS_chr2-1_0472 Mitochondrial alcohol dehydrogenase isozyme III K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis [PATH:ppa00100] D PAS_chr3_0317 Farnesyl-diphosphate farnesyl transferase (squalene synthase) K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D PAS_chr3_0124 Squalene epoxidase, catalyzes the epoxidation of squalene to 2,3-oxidosqualene K00511 SQLE; squalene monooxygenase [EC:1.14.14.17] D PAS_chr2-1_0391 Lanosterol synthase, an essential enzyme that catalyzes the cyclization of squalene 2,3-epoxide K01852 LSS; lanosterol synthase [EC:5.4.99.7] D PAS_chr3_0957 Lanosterol 14-alpha-demethylase, catalyzes the C-14 demethylation of lanosterol K05917 CYP51; sterol 14alpha-demethylase [EC:1.14.14.154 1.14.15.36] D PAS_chr1-1_0411 C-14 sterol reductase, acts in ergosterol biosynthesis K00222 TM7SF2; Delta14-sterol reductase [EC:1.3.1.70] D PAS_chr3_0053 C-4 methyl sterol oxidase, catalyzes the first of three steps required to remove two C-4 methyl grou K07750 MESO1; methylsterol monooxygenase [EC:1.14.18.9] D PAS_chr1-4_0604 C-3 sterol dehydrogenase K07748 NSDHL; sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) [EC:1.1.1.170] D PAS_chr2-1_0628 3-keto sterol reductase K09827 ERG27; 3-keto steroid reductase [EC:1.1.1.270] D PAS_chr1-4_0367 C-5 sterol desaturase, catalyzes the introduction of a C-5(6) double bond into episterol K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20] D PAS_chr3_0252 Steryl ester hydrolase K01052 LIPA; lysosomal acid lipase/cholesteryl ester hydrolase [EC:3.1.1.13] D PAS_chr1-1_0070 Steryl ester hydrolase, one of three gene products (Yeh1p, Yeh2p, Tgl1p) K01052 LIPA; lysosomal acid lipase/cholesteryl ester hydrolase [EC:3.1.1.13] D PAS_chr2-1_0466 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D PAS_chr3_0467 Acyl-CoA:sterol acyltransferase, isozyme of Are1p K00637 SOAT; sterol O-acyltransferase [EC:2.3.1.26] D PAS_chr3_0371 Delta(24)-sterol C-methyltransferase K00559 SMT1; sterol 24-C-methyltransferase [EC:2.1.1.41] D PAS_chr4_0198 C-8 sterol isomerase K09829 ERG2; C-8 sterol isomerase [EC:5.-.-.-] D PAS_chr3_0507 C-22 sterol desaturase K09831 ERG5; sterol 22-desaturase [EC:1.14.19.41] D PAS_chr4_0063 C-24(28) sterol reductase, catalyzes the final step in ergosterol biosynthesis K00223 ERG4; Delta24(24(1))-sterol reductase [EC:1.3.1.71] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ppa00561] D PAS_chr4_0938 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0576 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-1_0357 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-1_0360 2-methylbutyraldehyde reductase, may be involved in isoleucine catabolism K18097 GCY1; glycerol 2-dehydrogenase (NADP+) [EC:1.1.1.156] D PAS_chr4_0783 Glycerol kinase, converts glycerol to glycerol-3-phosphate K00864 glpK; glycerol kinase [EC:2.7.1.30] D PAS_chr1-3_0081 Glycerol-3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42] D PAS_chr3_0073 Glycerol 3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase of the K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42] D PAS_chr1-3_0156 1-acyl-sn-gylcerol-3-phosphate acyltransferase K13509 AGPAT1_2; lysophosphatidate acyltransferase [EC:2.3.1.51] D PAS_chr3_0271 Lysophospholipid acyltransferase K13519 LPT1; lysophospholipid acyltransferase [EC:2.3.1.51 2.3.1.23 2.3.1.-] D PAS_chr2-1_0835 hypothetical protein K22831 LOA1; 1-acylglycerol-3-phosphate O-acyltransferase [EC:2.3.1.51] D PAS_chr3_0512 hypothetical protein K15728 LPIN; phosphatidate phosphatase LPIN [EC:3.1.3.4] D PAS_chr3_0198 Diacylglycerol pyrophosphate (DGPP) phosphatase K18693 DPP1; diacylglycerol diphosphate phosphatase / phosphatidate phosphatase [EC:3.6.1.75 3.1.3.4] D PAS_chr1-1_0498 hypothetical protein K18693 DPP1; diacylglycerol diphosphate phosphatase / phosphatidate phosphatase [EC:3.6.1.75 3.1.3.4] D PAS_chr2-1_0878 hypothetical protein K00679 E2.3.1.158; phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158] D PAS_chr2-1_0794 Protein with lipolytic activity towards triacylglycerols and diacylglycerols when expressed in E. co K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D PAS_chr2-1_0279 Triacylglycerol lipase of the lipid particle, responsible for all the TAG lipase activity of the lip K14675 TGL3; TAG lipase / lysophosphatidylethanolamine acyltransferase [EC:3.1.1.3 2.3.1.-] D PAS_chr2-1_0466 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D PAS_chr1-1_0465 hypothetical protein K17900 ATG15; lipase ATG15 [EC:3.1.1.3] D PAS_chr3_0986 Serine hydrolase with sequence similarity to monoglyceride lipase (MGL) K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D PAS_chr3_0218 Diacylglycerol acyltransferase K14458 MOGAT1; 2-acylglycerol O-acyltransferase 1 [EC:2.3.1.22] C 00564 Glycerophospholipid metabolism [PATH:ppa00564] D PAS_chr2-2_0111 NAD-dependent glycerol-3-phosphate dehydrogenase, key enzyme of glycerol synthesis K00006 GPD1; glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8] D PAS_chr3_0579 Mitochondrial glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PAS_chr1-3_0081 Glycerol-3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42] D PAS_chr3_0073 Glycerol 3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase of the K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42] D PAS_chr1-3_0156 1-acyl-sn-gylcerol-3-phosphate acyltransferase K13509 AGPAT1_2; lysophosphatidate acyltransferase [EC:2.3.1.51] D PAS_chr3_0271 Lysophospholipid acyltransferase K13519 LPT1; lysophospholipid acyltransferase [EC:2.3.1.51 2.3.1.23 2.3.1.-] D PAS_chr2-1_0466 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D PAS_chr2-1_0835 hypothetical protein K22831 LOA1; 1-acylglycerol-3-phosphate O-acyltransferase [EC:2.3.1.51] D PAS_chr2-2_0063 NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase K06123 AYR1; 1-acylglycerone phosphate reductase [EC:1.1.1.101] D PAS_chr3_0512 hypothetical protein K15728 LPIN; phosphatidate phosphatase LPIN [EC:3.1.3.4] D PAS_chr3_0198 Diacylglycerol pyrophosphate (DGPP) phosphatase K18693 DPP1; diacylglycerol diphosphate phosphatase / phosphatidate phosphatase [EC:3.6.1.75 3.1.3.4] D PAS_chr1-1_0498 hypothetical protein K18693 DPP1; diacylglycerol diphosphate phosphatase / phosphatidate phosphatase [EC:3.6.1.75 3.1.3.4] D PAS_chr3_0072 Diacylglycerol kinase, localized to the endoplasmic reticulum (ER) K16368 DGK1; diacylglycerol kinase (CTP) [EC:2.7.1.174] D PAS_chr2-2_0357 sn-1,2-diacylglycerol ethanolamine-and cholinephosphotranferase K00994 CHPT1; diacylglycerol cholinephosphotransferase [EC:2.7.8.2] D PAS_chr3_0305 Phosphatidyl Glycerol phospholipase C K18694 PGC1; phosphatidylglycerol phospholipase C [EC:3.1.4.-] D PAS_chr3_0646 Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D PAS_chr4_0153 Phospholipase B (lysophospholipase) involved in phospholipid metabolism K13333 PLB; lysophospholipase [EC:3.1.1.5] D PAS_chr1-1_0009 Serine esterase that deacylates exogenous lysophospholipids K14676 NTE; lysophospholipid hydrolase [EC:3.1.1.5] D PAS_chr2-2_0314 Glycerophosphocholine (GroPCho) phosphodiesterase K18696 GDE1; glycerophosphodiester phosphodiesterase [EC:3.1.4.46] D PAS_chr1-4_0390 Choline kinase, catalyzing the first step in phosphatidylcholine synthesis via the CDP-choline K00866 CKI1; choline kinase [EC:2.7.1.32] D PAS_chr2-2_0401 Cholinephosphate cytidylyltransferase, also known as CTP:phosphocholine cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15] D PAS_chr4_0408 Choline phosphate cytidylyltransferase K00967 PCYT2; ethanolamine-phosphate cytidylyltransferase [EC:2.7.7.14] D PAS_chr3_0859 Phospholipid methyltransferase (methylene-fatty-acyl-phospholipid synthase) K00551 PEMT; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D PAS_chr1-4_0093 Phosphatidylethanolamine methyltransferase (PEMT) K16369 CHO2; phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17] D PAS_chr2-2_0044 Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PAS_chr1-1_0420 Phosphatidylserine synthase, functions in phospholipid biosynthesis K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PAS_chr1-4_0019 Phosphatidylserine decarboxylase of the mitochondrial inner membrane K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D PAS_chr3_1127 Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D PAS_chr1-3_0238 Phosphatidylglycerolphosphate synthase, catalyzes the synthesis of phosphatidylglycerolphosphate K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D PAS_chr1-4_0572 hypothetical protein K01094 GEP4; phosphatidylglycerophosphatase GEP4 [EC:3.1.3.27] D PAS_chr3_0570 Cardiolipin synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D PAS_chr3_0845 Lyso-phosphatidylcholine acyltransferase K13511 TAZ; monolysocardiolipin acyltransferase [EC:2.3.1.-] D PAS_chr2-1_0786 Putative protein of unknown function K13535 CLD1; cardiolipin-specific phospholipase [EC:3.1.1.-] D PAS_chr2-1_0242 Putative protein of unknown function K13535 CLD1; cardiolipin-specific phospholipase [EC:3.1.1.-] D PAS_chr2-1_0695 Phosphatidylinositol synthase, required for biosynthesis of phosphatidylinositol K00999 CDIPT; CDP-diacylglycerol--inositol 3-phosphatidyltransferase [EC:2.7.8.11] D PAS_chr2-2_0286 hypothetical protein K13621 BTA1; betaine lipid synthase C 00565 Ether lipid metabolism [PATH:ppa00565] D PAS_chr2-2_0063 NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase K06123 AYR1; 1-acylglycerone phosphate reductase [EC:1.1.1.101] D PAS_chr2-2_0357 sn-1,2-diacylglycerol ethanolamine-and cholinephosphotranferase K00994 CHPT1; diacylglycerol cholinephosphotransferase [EC:2.7.8.2] D PAS_chr2-1_0466 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D PAS_chr3_0646 Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D PAS_chr3_0271 Lysophospholipid acyltransferase K13519 LPT1; lysophospholipid acyltransferase [EC:2.3.1.51 2.3.1.23 2.3.1.-] D PAS_chr3_1092 Protein involved in nuclear migration, part of the dynein/dynactin pathway K16794 PAFAH1B1; platelet-activating factor acetylhydrolase IB subunit alpha C 00600 Sphingolipid metabolism [PATH:ppa00600] D PAS_chr3_0733 Component of serine palmitoyltransferase K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] D PAS_FragB_0040 Serine palmitoyltransferase 1 K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] D PAS_chr1-4_0149 3-ketosphinganine reductase, catalyzes the second step in phytosphingosine synthesis K04708 KDSR; 3-dehydrosphinganine reductase [EC:1.1.1.102] D PAS_chr1-1_0358 Ceramide synthase component, involved in synthesis of ceramide K04709 LAG1; very-long-chain ceramide synthase [EC:2.3.1.297] D PAS_chr2-2_0193 Ceramide synthase component K04709 LAG1; very-long-chain ceramide synthase [EC:2.3.1.297] D PAS_chr2-2_0252 Alkaline dihydroceramidase, involved in sphingolipid metabolism K04711 ACER3; dihydroceramidase [EC:3.5.1.-] D PAS_chr3_0939 delta 4-(E)-sphingolipid desaturase K04712 DEGS; sphingolipid 4-desaturase/C4-monooxygenase [EC:1.14.19.17 1.14.18.5] D PAS_chr3_0425 Sphinganine C4-hydroxylase K04713 SUR2; sphinganine C4-monooxygenase [EC:1.14.18.5] D PAS_chr4_0866 Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C K12351 SMPD2; sphingomyelin phosphodiesterase 2 [EC:3.1.4.12] D PAS_chr3_0597 Long-chain base-1-phosphate phosphatase with specificity for dihydrosphingosine-1-phosphate K23451 LCB3; dihydrosphingosine 1-phosphate phosphatase [EC:3.1.3.-] D PAS_chr3_0399 Minor sphingoid long-chain base kinase K04718 SPHK; sphingosine kinase [EC:2.7.1.91] D PAS_chr4_0598 Dihydrosphingosine phosphate lyase K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27] D PAS_chr3_0357 ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] C 00590 Arachidonic acid metabolism [PATH:ppa00590] D PAS_chr2-1_0466 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D PAS_chr2-1_0487 Leucyl aminopeptidase (leukotriene A4 hydrolase) with epoxide hydrolase activity K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] C 00591 Linoleic acid metabolism D PAS_chr2-1_0466 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] C 00592 alpha-Linolenic acid metabolism [PATH:ppa00592] D PAS_chr2-1_0466 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D PAS_chr1-4_0538 Fatty-acyl coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAS_chr2-2_0267 3-ketoacyl-CoA thiolase with broad chain length specificity K07513 ACAA1; acetyl-CoA acyltransferase 1 [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:ppa01040] D PAS_chr3_0602 Fatty acid elongase K10245 ELO2; fatty acid elongase 2 [EC:2.3.1.199] D PAS_chr3_0236 Elongase K10246 ELO3; fatty acid elongase 3 [EC:2.3.1.199] D PAS_chr4_0368 Microsomal beta-keto-reductase K10251 HSD17B12; 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:1.1.1.62 1.1.1.330] D PAS_chr3_0222 3-hydroxyacyl-CoA dehydratase K10703 HACD; very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:4.2.1.134] D PAS_chr4_0780 Enoyl reductase that catalyzes the last step in each cycle of very long chain fatty acid elongation K10258 TER; very-long-chain enoyl-CoA reductase [EC:1.3.1.93] D PAS_chr2-1_0072 Delta(9) fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D PAS_chr4_0259 Delta(9) fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D PAS_chr4_0052 hypothetical protein K10256 FAD2; omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22] D PAS_chr4_0743 hypothetical protein K23006 FAD3; omega-3 fatty acid desaturase (Delta-15 desaturase) [EC:1.14.19.-] D PAS_chr1-4_0538 Fatty-acyl coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAS_chr2-2_0267 3-ketoacyl-CoA thiolase with broad chain length specificity K07513 ACAA1; acetyl-CoA acyltransferase 1 [EC:2.3.1.16] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ppa00230] D PAS_chr2-1_0760 Spermidine synthase, involved in biosynthesis of spermidine and also in biosynthesis of pantothenic K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PAS_chr1-4_0264 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr2-1_0771 Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAS_chr2-2_0174 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAS_chr1-1_0006 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAS_chr1-1_0436 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAS_chr3_0062 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAS_chr1-1_0430 Phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PAS_chr3_0770 Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic pathway K11788 ADE5; phosphoribosylamine--glycine ligase / phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.4.13 6.3.3.1] D PAS_chr2-1_0121 Phosphoribosyl-glycinamide transformylase, catalyzes a step in the 'de novo' purine nucleotide biosy K00601 E2.1.2.2; phosphoribosylglycinamide formyltransferase [EC:2.1.2.2] D PAS_chr1-4_0551 Formylglycinamidine-ribonucleotide (FGAM)-synthetase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D PAS_chr3_0085 Phosphoribosylaminoimidazole carboxylase, catalyzes a step in the 'de novo' purine nucleotide biosyn K11808 ADE2; phosphoribosylaminoimidazole carboxylase [EC:4.1.1.21] D PAS_chr1-4_0450 N-succinyl-5-aminoimidazole-4-carboxamide ribotide (SAICAR) synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D PAS_chr2-2_0329 Adenylosuccinate lyase, catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PAS_chr2-1_0660 Enzyme of 'de novo' purine biosynthesis K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAS_chr3_1138 Adenine phosphoribosyltransferase, catalyzes the formation of AMP K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PAS_chr2-1_0685 hypothetical protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAS_chr1-1_0132 Purine nucleoside phosphorylase, specifically metabolizes inosine & guanosine nucleosides K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D PAS_chr3_0887 Dimeric hypoxanthine-guanine phosphoribosyltransferase K19836 HPT1; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D PAS_chr2-2_0059 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAS_chr1-1_0063 Apyrase with wide substrate specificity K14642 YND1; golgi apyrase [EC:3.6.1.5] D PAS_chr2-2_0017 Apyrase with wide substrate specificity K14642 YND1; golgi apyrase [EC:3.6.1.5] D PAS_chr3_1255 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PAS_chr2-2_0112 hypothetical protein K00106 XDH; xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] D PAS_chr1-3_0191 GMP synthase, an enzyme that catalyzes the second step in the biosynthesis of GMP from IMP K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PAS_chr1-4_0524 Guanine deaminase, a catabolic enzyme of the guanine salvage pathway K01487 guaD; guanine deaminase [EC:3.5.4.3] D PAS_chr2-2_0219 Guanylate kinase, converts GMP to GDP K00942 gmk; guanylate kinase [EC:2.7.4.8] D PAS_chr1-1_0282 One of two large regulatory subunits of ribonucleotide-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PAS_chr2-1_0209 One of two large regulatory subunits of ribonucleotide-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PAS_chr4_0197 Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D PAS_chr2-1_0101 Exopolyphosphatase, hydrolyzes inorganic polyphosphate (poly P) into Pi residues K01514 PRUNE; exopolyphosphatase [EC:3.6.1.11] D PAS_chr4_0356 Adenylate cyclase, required for cAMP production and cAMP-dependent protein kinase signaling K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D PAS_FragB_0008 cyclic AMP phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17] D PAS_chr1-4_0566 Low-affinity cyclic AMP phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17] D PAS_chr4_0613 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PAS_c121_0009 hypothetical protein K01490 AMPD; AMP deaminase [EC:3.5.4.6] D PAS_chr2-2_0162 Adenosine kinase, required for the utilization of S-adenosylmethionine (AdoMet) K00856 ADK; adenosine kinase [EC:2.7.1.20] D PAS_chr3_0257 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PAS_chr2-1_0493 Essential NTPase required for small ribosome subunit synthesis K18532 AK6; adenylate kinase [EC:2.7.4.3] D PAS_chr2-1_0111 Mitochondrial adenylate kinase, catalyzes the reversible synthesis of GTP and AMP from GDP and ADP K00944 AK3; nucleoside-triphosphate--adenylate kinase [EC:2.7.4.10] D PAS_chr2-1_0146 Dinucleoside triphosphate hydrolase K01522 FHIT; bis(5'-adenosyl)-triphosphatase [EC:3.6.1.29] D PAS_chr1-1_0323 Diadenosine 5',5''-P1,P4-tetraphosphate phosphorylase II (AP4A phosphorylase) K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53] D PAS_chr3_0667 Adenylylsulfate kinase, required for sulfate assimilation and involved in methionine metabolism K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PAS_chr1-4_0253 ATP sulfurylase, catalyzes the primary step of intracellular sulfate activation K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PAS_chr2-2_0279 hypothetical protein K00365 uaZ; urate oxidase [EC:1.7.3.3] D PAS_chr1-4_0329 hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PAS_chr1-3_0023 allantoinase K01466 allB; allantoinase [EC:3.5.2.5] D PAS_chr2-1_0749 Allantoicase, converts allantoate to urea and ureidoglycolate K01477 alc; allantoicase [EC:3.5.3.4] D PAS_chr2-1_0292 Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] C 00240 Pyrimidine metabolism [PATH:ppa00240] D PAS_chr2-2_0142 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase) K11541 URA2; carbamoyl-phosphate synthase / aspartate carbamoyltransferase [EC:6.3.5.5 2.1.3.2] D PAS_chr3_0799 Large subunit of carbamoyl phosphate synthetase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PAS_chr4_0138 Small subunit of carbamoyl phosphate synthetase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PAS_chr2-1_0593 Dihydroorotase, catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines K01465 URA4; dihydroorotase [EC:3.5.2.3] D PAS_chr2-2_0021 hypothetical protein K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D PAS_chr3_1197 hypothetical protein K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PAS_chr3_0381 Orotidine-5'-phosphate (OMP) decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PAS_chr2-1_0543 Uridylate kinase, catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines K13800 CMPK1; UMP-CMP kinase [EC:2.7.4.14] D PAS_chr2-2_0059 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAS_chr1-1_0063 Apyrase with wide substrate specificity K14642 YND1; golgi apyrase [EC:3.6.1.5] D PAS_chr2-2_0017 Apyrase with wide substrate specificity K14642 YND1; golgi apyrase [EC:3.6.1.5] D PAS_chr4_0378 Putative protein of unknown function K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PAS_chr4_0994 hypothetical protein K01937 pyrG; CTP synthase [EC:6.3.4.2] D PAS_chr2-1_0770 Uridine/cytidine kinase, component of the pyrimidine ribonucleotide salvage pathway K00876 udk; uridine kinase [EC:2.7.1.48] D PAS_chr1-4_0460 Uridine kinase (Uridine monophosphokinase) K00876 udk; uridine kinase [EC:2.7.1.48] D PAS_chr2-1_0685 hypothetical protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAS_chr1-1_0262 Uracil phosphoribosyltransferase, synthesizes UMP from uracil K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PAS_chr3_0134 hypothetical protein K16330 K16330; pseudouridylate synthase / pseudouridine kinase [EC:4.2.1.70 2.7.1.83] D PAS_chr3_0726 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D PAS_chr2-1_0047 Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to urac K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D PAS_chr1-1_0282 One of two large regulatory subunits of ribonucleotide-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PAS_chr2-1_0209 One of two large regulatory subunits of ribonucleotide-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PAS_chr4_0197 Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D PAS_chr1-1_0163 Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and dTTP synthesis K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PAS_chr3_0262 Thymidylate and uridylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D PAS_chr2-1_0478 dUTPase, catalyzes hydrolysis of dUTP to dUMP and PPi K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PAS_chr3_0996 Thymidylate synthase, required for de novo biosynthesis of pyrimidine deoxyribonucleotides K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PAS_chr3_0349 NADP(+)-dependent dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppa00250] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0200 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism K14455 GOT2; aspartate aminotransferase, mitochondrial [EC:2.6.1.1] D PAS_chr3_0406 D-aspartate oxidase K00272 DDO; D-aspartate oxidase [EC:1.4.3.1] D PAS_chr3_0591 Cytosolic L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAS_chr2-2_0481 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAS_chr3_0675 Asparagine synthetase, isozyme of Asn1p K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAS_chr3_0743 Nit protein, one of two proteins in S. cerevisiae with similarity to the Nit domain K13566 NIT2; omega-amidase [EC:3.5.1.3] D PAS_chr3_0482 Putative alanine transaminase (glutamic pyruvic transaminase) K00814 GPT; alanine transaminase [EC:2.6.1.2] D PAS_chr4_0416 Alanine:glyoxylate aminotransferase (AGT), catalyzes the synthesis of glycine from glyoxylate K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PAS_chr3_0216 Arginosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAS_chr1-1_0389 Argininosuccinate lyase, catalyzes the final step in the arginine biosynthesis pathway K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAS_chr4_0613 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PAS_chr2-2_0329 Adenylosuccinate lyase, catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PAS_chr2-1_0343 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D PAS_chr3_0965 Glutamate decarboxylase, converts glutamate into gamma-aminobutyric acid (GABA) K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D PAS_chr2-1_0107 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobu K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr4_0677 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr1-3_0024 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAS_chr2-1_0311 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PAS_chr1-1_0107 NADP(+)-dependent glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PAS_chr2-2_0496 hypothetical protein K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D PAS_chr4_0785 Glutamine synthetase (GS), synthesizes glutamine from glutamate and ammonia K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAS_chr2-2_0142 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase) K11541 URA2; carbamoyl-phosphate synthase / aspartate carbamoyltransferase [EC:6.3.5.5 2.1.3.2] D PAS_chr3_0799 Large subunit of carbamoyl phosphate synthetase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PAS_chr4_0138 Small subunit of carbamoyl phosphate synthetase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PAS_chr2-1_0626 Glutamine-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAS_chr1-1_0430 Phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ppa00260] D PAS_chr4_0150 Aspartate kinase (L-aspartate 4-P-transferase) K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAS_chr3_0471 Aspartic beta semi-aldehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAS_chr1-4_0049 Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), dimeric enzyme K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PAS_chr3_0899 Homoserine kinase, conserved protein required for threonine biosynthesis K00872 thrB; homoserine kinase [EC:2.7.1.39] D PAS_chr2-1_0269 Threonine synthase, conserved protein that catalyzes formation of threonine from 0-phosphohomoserine K01733 thrC; threonine synthase [EC:4.2.3.1] D PAS_chr4_0112 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D PAS_chr4_0415 Cytosolic serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_chr4_0587 Mitochondrial serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_chr4_0416 Alanine:glyoxylate aminotransferase (AGT), catalyzes the synthesis of glycine from glyoxylate K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PAS_chr3_0693 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr3_0826 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr4_0938 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D PAS_chr2-1_0657 3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAS_chr3_0566 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAS_chr4_0285 Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthes K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PAS_chr3_0349 NADP(+)-dependent dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D PAS_chr2-1_0716 5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D PAS_chr4_0621 hypothetical protein K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr1-4_0441 Peroxisomal primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr2-1_0307 hypothetical protein K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_FragB_0053 Glycine dehydrogenase [decarboxylating], mitochondrial K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAS_chr2-2_0492 hypothetical protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_FragB_0009 H subunit of the mitochondrial glycine decarboxylase complex K02437 gcvH; glycine cleavage system H protein D PAS_chr3_1033 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D PAS_chr1-1_0420 Phosphatidylserine synthase, functions in phospholipid biosynthesis K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PAS_chr2-2_0137 Cystathionine beta-synthase, catalyzes the synthesis of cystathionine from serine and homocysteine K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D PAS_chr1-4_0489 Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D PAS_chr1-4_0243 Threonine deaminase, catalyzes the first step in isoleucine biosynthesis K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAS_chr2-2_0408 Catabolic L-serine (L-threonine) deaminase, catalyzes the degradation of L-serine and L-threonine K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D PAS_chr3_0186 D-serine dehydratase (aka D-serine ammonia-lyase) K20498 DSD1; D-serine ammonia-lyase [EC:4.3.1.18] D PAS_chr2-1_0679 Tryptophan synthase involved in tryptophan biosynthesis K01694 TRP; tryptophan synthase [EC:4.2.1.20] D PAS_chr3_0634 Tryptophan synthase involved in tryptophan biosynthesis K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ppa00270] D PAS_chr2-1_0862 hypothetical protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAS_chr1-3_0273 Putative cysteine synthase, localized to the mitochondrial outer membrane K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAS_chr4_0330 Methionine and cysteine synthase (O-acetyl homoserine-O-acetyl serine sulfhydrylase) K17069 MET17; O-acetylhomoserine/O-acetylserine sulfhydrylase [EC:2.5.1.49 2.5.1.47] D PAS_chr1-4_0489 Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D PAS_chr2-1_0358 Cystathionine beta-lyase, converts cystathionine into homocysteine K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAS_chr2-2_0137 Cystathionine beta-synthase, catalyzes the synthesis of cystathionine from serine and homocysteine K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D PAS_chr4_0664 S-adenosylmethionine-homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D PAS_chr2-1_0160 Cobalamin-independent methionine synthase, involved in amino acid biosynthesis K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PAS_chr3_0876 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PAS_chr2-1_0202 S-adenosylmethionine decarboxylase, required for the biosynthesis of spermidine and spermine K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PAS_chr2-1_0885 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D PAS_chr4_0648 Spermine synthase, required for the biosynthesis of spermine K00802 SMS; spermine synthase [EC:2.5.1.22] D PAS_chr1-4_0545 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D PAS_chr4_0280 Putative methylthio-ribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D PAS_chr2-2_0446 Protein with sequence similarity to 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatases K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D PAS_chr2-1_0422 Acireductone dioxygenease involved in the methionine salvage pathway K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D PAS_chr1-4_0608 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis K00838 ARO8; aromatic amino acid aminotransferase I / 2-aminoadipate transaminase [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5] D PAS_chr3_0404 Putative protein of unknown function K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D PAS_chr3_0890 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PAS_chr4_0150 Aspartate kinase (L-aspartate 4-P-transferase) K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAS_chr3_0471 Aspartic beta semi-aldehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAS_chr1-4_0049 Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), dimeric enzyme K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PAS_chr4_0865 L-homoserine-O-acetyltransferase, catalyzes the conversion of homoserine to O-acetyl homoserine K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PAS_chr2-1_0752 Cystathionine gamma-synthase, converts cysteine into cystathionine K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PAS_chr4_0248 Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAS_chr1-1_0184 Gamma glutamylcysteine synthetase catalyzes the first step in glutathione (GSH) biosynthesis K11204 GCLC; glutamate--cysteine ligase catalytic subunit [EC:6.3.2.2] D PAS_chr1-4_0496 Glutathione synthetase K21456 GSS; glutathione synthase [EC:6.3.2.3] D PAS_chr2-2_0322 hypothetical protein K00456 CDO1; cysteine dioxygenase [EC:1.13.11.20] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0200 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism K14455 GOT2; aspartate aminotransferase, mitochondrial [EC:2.6.1.1] D PAS_chr2-1_0698 Putative protein of unknown function with similarity to human thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAS_chr2-1_0238 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate K00026 MDH2; malate dehydrogenase [EC:1.1.1.37] D PAS_chr4_0815 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate K00026 MDH2; malate dehydrogenase [EC:1.1.1.37] D PAS_chr2-2_0408 Catabolic L-serine (L-threonine) deaminase, catalyzes the degradation of L-serine and L-threonine K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D PAS_chr2-1_0657 3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAS_chr3_0566 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ppa00280] D PAS_chr4_0248 Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr2-2_0267 3-ketoacyl-CoA thiolase with broad chain length specificity K07513 ACAA1; acetyl-CoA acyltransferase 1 [EC:2.3.1.16] D PAS_chr3_0937 3-hydroxyisobutyryl-CoA hydrolase, member of a family of enoyl-CoA hydratase/isomerases K05605 HIBCH; 3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4] D PAS_chr4_0470 Mitochondrial aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0107 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobu K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr4_0677 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr2-1_0191 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-Co K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppa00290] D PAS_chr1-4_0243 Threonine deaminase, catalyzes the first step in isoleucine biosynthesis K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAS_chr2-2_0408 Catabolic L-serine (L-threonine) deaminase, catalyzes the degradation of L-serine and L-threonine K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D PAS_chr2-1_0368 Isopropylmalate isomerase, catalyzes the second step in the leucine biosynthesis pathway K01702 LEU1; 3-isopropylmalate dehydratase [EC:4.2.1.33] D PAS_chr3_0039 Beta-isopropylmalate dehydrogenase (IMDH), catalyzes the third step in the leucine biosynthesis path K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D PAS_chr4_0228 Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAS_chr2-1_0864 hypothetical protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAS_chr1-1_0432 Acetohydroxyacid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PAS_chr1-4_0458 Dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PAS_chr4_0248 Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAS_chr2-1_0415 Alpha-isopropylmalate synthase (2-isopropylmalate synthase) K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ppa00300] D PAS_chr1-4_0049 Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), dimeric enzyme K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PAS_chr4_0150 Aspartate kinase (L-aspartate 4-P-transferase) K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAS_chr3_0471 Aspartic beta semi-aldehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAS_chr1-1_0313 Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate K01655 LYS21; homocitrate synthase [EC:2.3.3.14] D PAS_chr1-4_0421 Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate K01655 LYS21; homocitrate synthase [EC:2.3.3.14] D PAS_chr3_0659 Putative mitochondrial aconitase isozyme K17450 ACO2; homoaconitase [EC:4.2.1.-] D PAS_chr4_0795 Homoaconitase, catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lys K01705 LYS4; homoaconitate hydratase [EC:4.2.1.36] D PAS_chr2-2_0168 Homo-isocitrate dehydrogenase, an NAD-linked mitochondrial enzyme K05824 LYS12; homoisocitrate dehydrogenase [EC:1.1.1.87] D PAS_chr1-4_0608 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis K00838 ARO8; aromatic amino acid aminotransferase I / 2-aminoadipate transaminase [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5] D PAS_chr1-4_0153 Alpha aminoadipate reductase K00143 LYS2; L-2-aminoadipate reductase [EC:1.2.1.95] D PAS_chr3_0528 Saccharopine dehydrogenase (NADP+, L-glutamate-forming) K00293 LYS9; saccharopine dehydrogenase (NADP+, L-glutamate forming) [EC:1.5.1.10] D PAS_chr1-1_0447 Saccharopine dehydrogenase (NAD+, L-lysine-forming) K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7] C 00310 Lysine degradation [PATH:ppa00310] D PAS_chr1-1_0447 Saccharopine dehydrogenase (NAD+, L-lysine-forming) K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7] D PAS_chr3_0528 Saccharopine dehydrogenase (NADP+, L-glutamate-forming) K00293 LYS9; saccharopine dehydrogenase (NADP+, L-glutamate forming) [EC:1.5.1.10] D PAS_chr1-3_0094 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr1-3_0024 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAS_chr1-1_0152 Cytochrome c lysine methyltransferase, trimethylates residue 72 of apo-cytochrome c (Cyc1p) K18804 CTM1; [cytochrome c]-lysine N-methyltransferase [EC:2.1.1.59] D PAS_chr2-2_0494 hypothetical protein K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] D PAS_chr1-1_0102 Histone methyltransferase with a role in transcriptional elongation K06101 ASH1L; [histone H3]-lysine4 N-trimethyltransferase ASH1L [EC:2.1.1.354] D PAS_chr1-4_0287 Histone methyltransferase K23700 SET2; [histone H3]-lysine36 N-trimethyltransferase [EC:2.1.1.359] D PAS_chr3_1133 Nucleosomal histone H3-Lys79 methylase, associates with transcriptionally active genes K11427 DOT1L; [histone H3]-lysine79 N-trimethyltransferase [EC:2.1.1.360] D PAS_chr1-1_0129 hypothetical protein K00474 TMLHE; trimethyllysine dioxygenase [EC:1.14.11.8] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:ppa00220] D PAS_chr3_0623 Ornithine carbamoyltransferase (carbamoylphosphate:L-ornithine carbamoyltransferase) K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PAS_chr3_0216 Arginosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAS_chr1-1_0389 Argininosuccinate lyase, catalyzes the final step in the arginine biosynthesis pathway K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAS_chr4_0684 Arginase, responsible for arginine degradation K01476 rocF; arginase [EC:3.5.3.1] D PAS_chr2-2_0288 Arginase, responsible for arginine degradation K01476 rocF; arginase [EC:3.5.3.1] D PAS_chr4_0173 Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities K14541 DUR1; urea carboxylase / allophanate hydrolase [EC:6.3.4.6 3.5.1.54] D PAS_chr4_0785 Glutamine synthetase (GS), synthesizes glutamine from glutamate and ammonia K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAS_chr2-1_0311 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PAS_chr1-1_0107 NADP(+)-dependent glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0200 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism K14455 GOT2; aspartate aminotransferase, mitochondrial [EC:2.6.1.1] D PAS_chr3_0482 Putative alanine transaminase (glutamic pyruvic transaminase) K00814 GPT; alanine transaminase [EC:2.6.1.2] D PAS_chr1-4_0215 Acetylglutamate synthase (glutamate N-acetyltransferase), mitochondrial enzyme K00618 ARG2; amino-acid N-acetyltransferase [EC:2.3.1.1] D PAS_chr3_0176 Mitochondrial ornithine acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D PAS_chr2-1_0168 Protein that is processed in the mitochondrion to yield acetylglutamate kinase and N-acetyl-gamma-gl K12659 ARG56; N-acetyl-gamma-glutamyl-phosphate reductase / acetylglutamate kinase [EC:1.2.1.38 2.7.2.8] D PAS_chr4_0645 Acetylornithine aminotransferase K00818 E2.6.1.11; acetylornithine aminotransferase [EC:2.6.1.11] C 00330 Arginine and proline metabolism [PATH:ppa00330] D PAS_chr2-1_0047 Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to urac K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D PAS_chr3_0417 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PAS_chr2-1_0885 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D PAS_chr4_0648 Spermine synthase, required for the biosynthesis of spermine K00802 SMS; spermine synthase [EC:2.5.1.22] D PAS_chr2-1_0202 S-adenosylmethionine decarboxylase, required for the biosynthesis of spermidine and spermine K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PAS_chr3_0922 Polyamine oxidase, converts spermine to spermidine K13367 FMS1; polyamine oxidase [EC:1.5.3.17] D PAS_chr4_0823 Polyamine oxidase, converts spermine to spermidine K13367 FMS1; polyamine oxidase [EC:1.5.3.17] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0283 Putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D PAS_chr4_0684 Arginase, responsible for arginine degradation K01476 rocF; arginase [EC:3.5.3.1] D PAS_chr2-2_0288 Arginase, responsible for arginine degradation K01476 rocF; arginase [EC:3.5.3.1] D PAS_chr3_0410 L-ornithine transaminase (OTAse) K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D PAS_chr4_0398 Delta 1-pyrroline-5-carboxylate reductase, catalyzes the last step in proline biosynthesis K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PAS_chr1-3_0269 Proline oxidase, nuclear-encoded mitochondrial protein K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D PAS_chr2-2_0496 hypothetical protein K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D PAS_chr3_0294 Gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PAS_chr4_0665 Gamma-glutamyl phosphate reductase, catalyzes the second step in proline biosynthesis K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0200 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism K14455 GOT2; aspartate aminotransferase, mitochondrial [EC:2.6.1.1] D PAS_chr3_1033 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00340 Histidine metabolism [PATH:ppa00340] D PAS_chr1-4_0234 ATP phosphoribosyltransferase (hexameric enzyme) catalyzes the first step in histidine biosynthesis K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PAS_chr1-4_0160 Multifunctional enzyme HIS4 K14152 HIS4; phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase [EC:3.6.1.31 3.5.4.19 1.1.1.23] D PAS_chr4_0343 Phosphoribosyl-5-amino-1-phosphoribosyl-4-imidazolecarboxiamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PAS_chr4_0703 Imidazole glycerol phosphate synthase (glutamine amidotransferase:cyclase) K01663 HIS7; imidazole glycerol-phosphate synthase [EC:4.3.2.10] D PAS_chr3_0788 Imidazoleglycerol-phosphate dehydratase, catalyzes the sixth step in histidine biosynthesis K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D PAS_chr2-1_0684 Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAS_chr1-1_0397 Histidinolphosphatase, catalyzes the eighth step in histidine biosynthesis K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0928 hypothetical protein K19787 CARNMT1; carnosine N-methyltransferase [EC:2.1.1.22] D PAS_chr4_0146 hypothetical protein K20247 EGT2; hercynylcysteine S-oxide lyase [EC:4.4.1.36] C 00350 Tyrosine metabolism [PATH:ppa00350] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0200 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism K14455 GOT2; aspartate aminotransferase, mitochondrial [EC:2.6.1.1] D PAS_chr2-1_0684 Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAS_chr1-4_0608 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis K00838 ARO8; aromatic amino acid aminotransferase I / 2-aminoadipate transaminase [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5] D PAS_chr4_0147 Aromatic aminotransferase II K05821 ARO9; aromatic amino acid aminotransferase II [EC:2.6.1.58 2.6.1.28] D PAS_chr1-3_0154 hypothetical protein K05821 ARO9; aromatic amino acid aminotransferase II [EC:2.6.1.58 2.6.1.28] D PAS_chr4_0335 hypothetical protein K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PAS_chr4_0621 hypothetical protein K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr1-4_0441 Peroxisomal primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr2-1_0307 hypothetical protein K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr3_1028 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAS_chr2-1_0472 Mitochondrial alcohol dehydrogenase isozyme III K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAS_chr1-3_0024 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAS_chr1-1_0164 Putative protein of fumarylacetoacetate hydrolase family protein K01557 FAHD1; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism [PATH:ppa00360] D PAS_chr4_0621 hypothetical protein K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr1-4_0441 Peroxisomal primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr2-1_0307 hypothetical protein K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0200 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism K14455 GOT2; aspartate aminotransferase, mitochondrial [EC:2.6.1.1] D PAS_chr2-1_0684 Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAS_chr1-4_0608 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis K00838 ARO8; aromatic amino acid aminotransferase I / 2-aminoadipate transaminase [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5] D PAS_chr4_0147 Aromatic aminotransferase II K05821 ARO9; aromatic amino acid aminotransferase II [EC:2.6.1.58 2.6.1.28] D PAS_chr1-3_0154 hypothetical protein K05821 ARO9; aromatic amino acid aminotransferase II [EC:2.6.1.58 2.6.1.28] D PAS_chr4_0314 Phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde K12732 ARO10; phenylpyruvate decarboxylase [EC:4.1.1.-] D PAS_chr3_0095 Phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde, whi K12732 ARO10; phenylpyruvate decarboxylase [EC:4.1.1.-] D PAS_chr4_0335 hypothetical protein K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PAS_chr3_0283 Putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D PAS_chr3_0864 hypothetical protein K10437 PHAA; phenylacetate 2-hydroxylase [EC:1.14.14.54] C 00380 Tryptophan metabolism [PATH:ppa00380] D PAS_chr1-4_0083 Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase K00463 IDO; indoleamine 2,3-dioxygenase [EC:1.13.11.52] D PAS_chr4_0830 Kynurenine 3-mono oxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9] D PAS_chr3_1194 hypothetical protein K01556 KYNU; kynureninase [EC:3.7.1.3] D PAS_chr2-2_0311 3-hydroxyanthranilic acid dioxygenase, required for the de novo biosynthesis of NAD from tryptophan K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] D PAS_chr1-3_0094 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr3_1132 Kynurenine aminotransferase, catalyzes formation of kynurenic acid from kynurenine K14264 BNA3; kynurenine aminotransferase [EC:2.6.1.7] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0608 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis K00838 ARO8; aromatic amino acid aminotransferase I / 2-aminoadipate transaminase [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5] D PAS_chr2-1_0037 Nitrilase, member of the nitrilase branch of the nitrilase superfamily K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAS_chr3_0283 Putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D PAS_chr2-2_0131 Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1 K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ppa00400] D PAS_chr3_0936 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAS_chr1-4_0218 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAS_chr2-1_0473 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAS_chr3_0506 Pentafunctional arom protein K13830 ARO1; pentafunctional AROM polypeptide [EC:4.2.3.4 4.2.1.10 1.1.1.25 2.7.1.71 2.5.1.19] D PAS_chr2-1_0637 Bifunctional chorismate synthase and flavin reductase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PAS_chr3_0962 Bifunctional enzyme exhibiting indole-3-glycerol-phosphate synthase and anthranilate synthase activi K01656 TRP3; anthranilate synthase / indole-3-glycerol phosphate synthase [EC:4.1.3.27 4.1.1.48] D PAS_chr2-1_0158 Anthranilate synthase, catalyzes the initial step of tryptophan biosynthesis, forms multifunctional K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PAS_chr4_0294 Anthranilate phosphoribosyl transferase of the tryptophan biosynthetic pathway K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D PAS_chr1-3_0029 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D PAS_chr3_0634 Tryptophan synthase involved in tryptophan biosynthesis K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PAS_chr2-1_0679 Tryptophan synthase involved in tryptophan biosynthesis K01694 TRP; tryptophan synthase [EC:4.2.1.20] D PAS_chr4_0050 Chorismate mutase, catalyzes the conversion of chorismate to prephenate K01850 E5.4.99.5; chorismate mutase [EC:5.4.99.5] D PAS_chr2-2_0317 Prephenate dehydrogenase involved in tyrosine biosynthesis K00211 TYR1; prephenate dehydrogenase (NADP+) [EC:1.3.1.13] D PAS_chr4_0437 Prephenate dehydratase, catalyzes the conversion of prephanate to phenylpyruvate K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0200 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism K14455 GOT2; aspartate aminotransferase, mitochondrial [EC:2.6.1.1] D PAS_chr2-1_0684 Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAS_chr1-4_0608 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis K00838 ARO8; aromatic amino acid aminotransferase I / 2-aminoadipate transaminase [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5] D PAS_chr4_0147 Aromatic aminotransferase II K05821 ARO9; aromatic amino acid aminotransferase II [EC:2.6.1.58 2.6.1.28] D PAS_chr1-3_0154 hypothetical protein K05821 ARO9; aromatic amino acid aminotransferase II [EC:2.6.1.58 2.6.1.28] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ppa00410] D PAS_chr2-1_0343 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D PAS_chr3_0965 Glutamate decarboxylase, converts glutamate into gamma-aminobutyric acid (GABA) K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D PAS_chr2-1_0107 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobu K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr4_0677 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr3_0922 Polyamine oxidase, converts spermine to spermidine K13367 FMS1; polyamine oxidase [EC:1.5.3.17] D PAS_chr4_0823 Polyamine oxidase, converts spermine to spermidine K13367 FMS1; polyamine oxidase [EC:1.5.3.17] D PAS_chr4_0621 hypothetical protein K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr1-4_0441 Peroxisomal primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr2-1_0307 hypothetical protein K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0198 Pantothenate synthase, also known as pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PAS_chr3_0937 3-hydroxyisobutyryl-CoA hydrolase, member of a family of enoyl-CoA hydratase/isomerases K05605 HIBCH; 3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4] D PAS_chr2-1_0776 Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway K14729 FOX2; multifunctional beta-oxidation protein [EC:4.2.1.- 1.1.1.-] D PAS_chr1-4_0538 Fatty-acyl coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAS_chr4_0470 Mitochondrial aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:ppa00430] D PAS_chr2-2_0322 hypothetical protein K00456 CDO1; cysteine dioxygenase [EC:1.13.11.20] D PAS_chr2-1_0343 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D PAS_chr3_0965 Glutamate decarboxylase, converts glutamate into gamma-aminobutyric acid (GABA) K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D PAS_chr3_0561 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAS_chr2-1_0311 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism [PATH:ppa00440] D PAS_chr4_0408 Choline phosphate cytidylyltransferase K00967 PCYT2; ethanolamine-phosphate cytidylyltransferase [EC:2.7.7.14] D PAS_chr2-2_0401 Cholinephosphate cytidylyltransferase, also known as CTP:phosphocholine cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15] D PAS_chr2-2_0357 sn-1,2-diacylglycerol ethanolamine-and cholinephosphotranferase K00994 CHPT1; diacylglycerol cholinephosphotransferase [EC:2.7.8.2] C 00450 Selenocompound metabolism [PATH:ppa00450] D PAS_chr2-1_0752 Cystathionine gamma-synthase, converts cysteine into cystathionine K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PAS_chr2-1_0358 Cystathionine beta-lyase, converts cystathionine into homocysteine K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAS_chr2-1_0160 Cobalamin-independent methionine synthase, involved in amino acid biosynthesis K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PAS_chr1-4_0489 Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D PAS_chr2-2_0480 hypothetical protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PAS_chr1-4_0253 ATP sulfurylase, catalyzes the primary step of intracellular sulfate activation K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PAS_chr2-1_0396 Mitochondrial methionyl-tRNA synthetase (MetRS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAS_chr2-1_0346 Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ppa00460] D PAS_chr4_0013 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PAS_chr2-1_0037 Nitrilase, member of the nitrilase branch of the nitrilase superfamily K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAS_chr3_0561 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAS_chr3_0591 Cytosolic L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAS_chr2-2_0481 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAS_chr4_0415 Cytosolic serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_chr4_0587 Mitochondrial serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ppa00470] D PAS_chr3_0406 D-aspartate oxidase K00272 DDO; D-aspartate oxidase [EC:1.4.3.1] D PAS_chr3_0186 D-serine dehydratase (aka D-serine ammonia-lyase) K20498 DSD1; D-serine ammonia-lyase [EC:4.3.1.18] D PAS_chr3_1033 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00480 Glutathione metabolism [PATH:ppa00480] D PAS_chr3_0561 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAS_chr1-1_0029 hypothetical protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D PAS_chr2-2_0423 Putative protein of unknown function K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D PAS_chr1-1_0184 Gamma glutamylcysteine synthetase catalyzes the first step in glutathione (GSH) biosynthesis K11204 GCLC; glutamate--cysteine ligase catalytic subunit [EC:6.3.2.2] D PAS_chr1-4_0496 Glutathione synthetase K21456 GSS; glutathione synthase [EC:6.3.2.3] D PAS_chr1-3_0128 Probable di-and tri-peptidase K15428 DUG1; Cys-Gly metallodipeptidase DUG1 [EC:3.4.13.-] D PAS_chr2-2_0116 ER associated glutathione S-transferase capable of homodimerization K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAS_chr2-1_0490 Nitrogen catabolite repression transcriptional regulator K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAS_chr2-1_0033 Nitrogen catabolite repression transcriptional regulator that acts by inhibition of GLN3 transcripti K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAS_chr3_1011 Cytosolic and mitochondrial glutathione oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D PAS_chr1-1_0233 Mitochondrial NADP-specific isocitrate dehydrogenase, catalyzes the oxidation of isocitrate K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAS_chr2-1_0580 Cytosolic NADP-specific isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAS_chr3_0277 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PAS_chr2-1_0308 Glucose-6-phosphate dehydrogenase (G6PD), catalyzes the first step of the pentose phosphate pathway K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAS_chr3_0906 Mitochondrial peroxiredoxin (1-Cys Prx) with thioredoxin peroxidase activity K24137 PRX1; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D PAS_chr1-1_0433 Mitochondrial peroxiredoxin (1-Cys Prx) with thioredoxin peroxidase activity K24137 PRX1; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D PAS_chr3_0417 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PAS_chr2-1_0885 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D PAS_chr4_0648 Spermine synthase, required for the biosynthesis of spermine K00802 SMS; spermine synthase [EC:2.5.1.22] D PAS_chr1-1_0282 One of two large regulatory subunits of ribonucleotide-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PAS_chr2-1_0209 One of two large regulatory subunits of ribonucleotide-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PAS_chr4_0197 Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis [PATH:ppa00510] D PAS_chr1-4_0673 hypothetical protein K12345 SRD5A3; 3-oxo-5-alpha-steroid 4-dehydrogenase 3 / polyprenol reductase [EC:1.3.1.22 1.3.1.94] D PAS_chr2-1_0498 Dolichol kinase, catalyzes the terminal step in dolichyl monophosphate (Dol-P) biosynthesis K00902 DOLK; dolichol kinase [EC:2.7.1.108] D PAS_chr2-1_0727 UDP-N-acetyl-glucosamine-1-P transferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D PAS_chr3_0552 UDP-glucose:dolichyl-phosphate glucosyltransferase K00729 ALG5; dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] D PAS_chr1-4_0448 Catalytic component of UDP-GlcNAc transferase K07432 ALG13; beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] D PAS_chr3_0944 Component of UDP-GlcNAc transferase K07441 ALG14; beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] D PAS_chr1-1_0459 Dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D PAS_chr1-4_0070 hypothetical protein K09658 DPM2; dolichol phosphate-mannose biosynthesis regulatory protein D PAS_chr2-1_0759 Mannosyltransferase, involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER) K03842 ALG1; beta-1,4-mannosyltransferase [EC:2.4.1.142] D PAS_c121_0002 hypothetical protein K03843 ALG2; alpha-1,3/alpha-1,6-mannosyltransferase [EC:2.4.1.132 2.4.1.257] D PAS_chr1-4_0417 Alpha-1,2-mannosyltransferase K03844 ALG11; alpha-1,2-mannosyltransferase [EC:2.4.1.131] D PAS_chr4_0712 Dolichol-P-Man dependent alpha(1-3) mannosyltransferase K03845 ALG3; alpha-1,3-mannosyltransferase [EC:2.4.1.258] D PAS_chr2-2_0036 Mannosyltransferase, involved in N-linked glycosylation K03846 ALG9; alpha-1,2-mannosyltransferase [EC:2.4.1.259 2.4.1.261] D PAS_chr4_0544 Alpha-1,6-mannosyltransferase localized to the ER K03847 ALG12; alpha-1,6-mannosyltransferase [EC:2.4.1.260] D PAS_chr2-1_0549 Alpha 1,3 glucosyltransferase K03848 ALG6; alpha-1,3-glucosyltransferase [EC:2.4.1.267] D PAS_chr3_0999 Glucosyl transferase, involved in N-linked glycosylation K03849 ALG8; alpha-1,3-glucosyltransferase [EC:2.4.1.265] D PAS_chr1-4_0475 Dolichyl-phosphoglucose-dependent alpha-1,2 glucosyltransferase of the ER K03850 ALG10; alpha-1,2-glucosyltransferase [EC:2.4.1.256] D PAS_chr1-4_0685 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18] D PAS_chr3_0741 Alpha subunit of the oligosaccharyltransferase complex of the ER lumen K12666 RPN1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I) D PAS_chr1-3_0248 hypothetical protein K12667 RPN2; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II) D PAS_chr2-2_0346 Epsilon subunit of the oligosaccharyltransferase complex of the ER lumen K12668 DAD1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DAD1/OST2 D PAS_chr4_0610 Gamma subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-l K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6 D PAS_chr3_1142 Subunit of the oligosaccharyltransferase complex of the ER lumen K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6 D PAS_chr2-1_0423 Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex K12670 DDOST; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DDOST/WBP1 D PAS_chr4_0264 Dolichyl pyrophosphate (Dol-P-P) phosphatase with a luminally oriented active site in the ER K07252 DOLPP1; dolichyldiphosphatase [EC:3.6.1.43] D PAS_chr1-1_0215 Processing alpha glucosidase I, ER type II integral membrane N-glycoprotein K01228 MOGS; mannosyl-oligosaccharide glucosidase [EC:3.2.1.106] D PAS_chr2-1_0778 Glucosidase II catalytic subunit required for normal cell wall synthesis K05546 GANAB; mannosyl-oligosaccharide alpha-1,3-glucosidase [EC:3.2.1.207] D PAS_chr2-1_0753 Alpha-1,2-mannosidase involved in ER quality control K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209] C 00513 Various types of N-glycan biosynthesis [PATH:ppa00513] D PAS_chr1-4_0448 Catalytic component of UDP-GlcNAc transferase K07432 ALG13; beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] D PAS_chr3_0944 Component of UDP-GlcNAc transferase K07441 ALG14; beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] D PAS_chr2-1_0759 Mannosyltransferase, involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER) K03842 ALG1; beta-1,4-mannosyltransferase [EC:2.4.1.142] D PAS_c121_0002 hypothetical protein K03843 ALG2; alpha-1,3/alpha-1,6-mannosyltransferase [EC:2.4.1.132 2.4.1.257] D PAS_chr1-4_0417 Alpha-1,2-mannosyltransferase K03844 ALG11; alpha-1,2-mannosyltransferase [EC:2.4.1.131] D PAS_chr4_0712 Dolichol-P-Man dependent alpha(1-3) mannosyltransferase K03845 ALG3; alpha-1,3-mannosyltransferase [EC:2.4.1.258] D PAS_chr2-2_0036 Mannosyltransferase, involved in N-linked glycosylation K03846 ALG9; alpha-1,2-mannosyltransferase [EC:2.4.1.259 2.4.1.261] D PAS_chr4_0544 Alpha-1,6-mannosyltransferase localized to the ER K03847 ALG12; alpha-1,6-mannosyltransferase [EC:2.4.1.260] D PAS_chr1-4_0685 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18] D PAS_chr3_0741 Alpha subunit of the oligosaccharyltransferase complex of the ER lumen K12666 RPN1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I) D PAS_chr1-3_0248 hypothetical protein K12667 RPN2; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II) D PAS_chr2-2_0346 Epsilon subunit of the oligosaccharyltransferase complex of the ER lumen K12668 DAD1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DAD1/OST2 D PAS_chr4_0610 Gamma subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-l K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6 D PAS_chr3_1142 Subunit of the oligosaccharyltransferase complex of the ER lumen K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6 D PAS_chr2-1_0423 Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex K12670 DDOST; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DDOST/WBP1 D PAS_chr2-1_0753 Alpha-1,2-mannosidase involved in ER quality control K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209] D PAS_chr1-3_0251 Mannosyltransferase of the cis-Golgi apparatus K05528 OCH1; alpha 1,6-mannosyltransferase [EC:2.4.1.232] D PAS_chr4_0103 Subunit of Golgi mannosyltransferase complex also containing Anp1p, Mnn10p, Mnn11p, and Hoc1p K05529 MNN9; mannan polymerase complexes MNN9 subunit [EC:2.4.1.232] D PAS_chr2-1_0772 Component of the mannan polymerase I K05530 VAN1; mannan polymerase I complex VAN1 subunit [EC:2.4.1.-] D PAS_chr2-2_0185 Subunit of a Golgi mannosyltransferase complex K05531 MNN10; mannan polymerase II complex MNN10 subunit [EC:2.4.1.-] D PAS_chr2-2_0125 Subunit of a Golgi mannosyltransferase complex that also contains Anp1p, Mnn9p, Mnn10p, and Hoc1p K05532 MNN11; mannan polymerase II complex MNN11 subunit [EC:2.4.1.-] D PAS_chr3_0515 Subunit of the alpha-1,6 mannosyltransferase complex K05533 ANP1; mannan polymerase II complex ANP1 subunit [EC:2.4.1.-] D PAS_chr3_0620 Alpha-1,6-mannosyltransferase involved in cell wall mannan biosynthesis K05534 HOC1; mannan polymerase II complex HOC1 subunit [EC:2.4.1.-] D PAS_chr1-4_0037 Alpha-1,2-mannosyltransferase K05535 MNN2; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr3_0370 Alpha-1,2-mannosyltransferase, responsible for addition of the first alpha-1,2-linked mannose K05535 MNN2; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr3_0787 Alpha-1,2-mannosyltransferase K05535 MNN2; alpha 1,2-mannosyltransferase [EC:2.4.1.-] C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:ppa00515] D PAS_chr2-1_0256 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr4_0777 Protein O-mannosyltransferase, transfers mannose from dolichyl phosphate-D-mannose K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr2-1_0212 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr1-1_0286 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:ppa00514] D PAS_chr2-1_0256 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr4_0777 Protein O-mannosyltransferase, transfers mannose from dolichyl phosphate-D-mannose K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr2-1_0212 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr1-1_0286 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr3_0215 Alpha1,2-mannosyltransferase K10967 KTR1_3; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr3_1162 hypothetical protein K10967 KTR1_3; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr1-3_0138 Alpha-1,2-mannosyltransferase involved in O-and N-linked protein glycosylation K10967 KTR1_3; alpha 1,2-mannosyltransferase [EC:2.4.1.-] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis [PATH:ppa00563] D PAS_chr2-1_0303 UDP-GlcNAc-binding and catalytic subunit of the enzyme that mediates the first step in GPI synthesis K03857 PIGA; phosphatidylinositol N-acetylglucosaminyltransferase subunit A [EC:2.4.1.198] D PAS_chr3_0454 hypothetical protein K03859 PIGC; phosphatidylinositol N-acetylglucosaminyltransferase subunit C D PAS_chr2-1_0645 hypothetical protein K03861 PIGP; phosphatidylinositol N-acetylglucosaminyltransferase subunit P D PAS_chr1-4_0470 Membrane protein involved in the synthesis of N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI) K03860 PIGQ; phosphatidylinositol N-acetylglucosaminyltransferase subunit Q D PAS_chr1-4_0070 hypothetical protein K09658 DPM2; dolichol phosphate-mannose biosynthesis regulatory protein D PAS_chr1-1_0044 ER membrane protein,N-acetylglucosaminyl phosphatidylinositol de-N-acetylase K03434 PIGL; N-acetylglucosaminylphosphatidylinositol deacetylase [EC:3.5.1.89] D PAS_chr3_0369 Protein involved in the inositol acylation of glucosaminyl phosphatidylinositol (GlcN-PI) K05283 PIGW; glucosaminylphosphatidylinositol acyltransferase [EC:2.3.-.-] D PAS_chr4_0595 Putative protein of unknown function K01127 GPLD1; glycosylphosphatidylinositol phospholipase D [EC:3.1.4.50] D PAS_chr3_0386 Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I K05284 PIGM; GPI mannosyltransferase 1 subunit M [EC:2.4.1.-] D PAS_chr2-2_0076 Protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis K05285 PIGN; GPI ethanolamine phosphate transferase 1 [EC:2.7.-.-] D PAS_chr2-2_0039 Integral membrane protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis K05286 PIGB; GPI mannosyltransferase 3 [EC:2.4.1.-] D PAS_chr1-4_0381 ER membrane localized phosphoryltransferase that adds phosphoethanolamine K05288 PIGO; GPI ethanolamine phosphate transferase 3 subunit O [EC:2.7.-.-] D PAS_chr4_0652 ER membrane protein involved in a late step of glycosylphosphatidylinositol (GPI) anchor assembly K05287 PIGF; GPI ethanolamine phosphate transferase 2/3 subunit F D PAS_FragB_0071 hypothetical protein K05289 GAA1; GPI-anchor transamidase subunit GAA1 D PAS_chr4_0261 ER membrane glycoprotein subunit of the glycosylphosphatidylinositol transamidase complex K05290 PIGK; GPI-anchor transamidase subunit K D PAS_chr3_0475 Transmembrane protein subunit of the glycosylphosphatidylinositol transamidase complex K05291 PIGS; GPI-anchor transamidase subunit S D PAS_chr2-1_0417 Transmembrane protein subunit of the glycosylphosphatidylinositol transamidase complex K05292 PIGT; GPI-anchor transamidase subunit T D PAS_chr2-2_0427 GPI transamidase subunit K05293 PIGU; GPI-anchor transamidase subunit U D PAS_chr2-1_0699 GPI inositol deacylase of the ER that negatively regulates COPII vesicle formation K05294 PGAP1; GPI inositol-deacylase [EC:3.-.-.-] D PAS_chr3_0423 Putative membrane protein of unknown function involved in Mn2+ homeostasis K23362 MPPE1; ethanolamine phosphate phosphodiesterase [EC:3.1.-.-] D PAS_chr1-4_0333 hypothetical protein K23362 MPPE1; ethanolamine phosphate phosphodiesterase [EC:3.1.-.-] D PAS_chr3_0882 Alpha 1,2-mannosyltransferase involved in glycosyl phosphatidyl inositol (GPI) biosynthesis K08098 PIGZ; GPI mannosyltransferase 4 [EC:2.4.1.-] C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series [PATH:ppa00604] D PAS_chr2-2_0028 Putative protein, acetyl coenzyme A transporter K03372 SLC33A1; MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1 [EC:2.3.1.-] C 00511 Other glycan degradation [PATH:ppa00511] D PAS_chr4_0790 Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ppa00730] D PAS_chr3_0842 Multifunctional protein with both hydroxymethylpyrimidine kinase and thiaminase activities K00877 THI20; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase / thiaminase [EC:2.7.1.49 2.7.4.7 3.5.99.2] D PAS_chr1-4_0141 Protein with similarity to hydroxymethylpyrimidine phosphate kinases K00877 THI20; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase / thiaminase [EC:2.7.1.49 2.7.4.7 3.5.99.2] D PAS_chr4_0065 Protein involved in synthesis of the thiamine precursor hydroxymethylpyrimidine (HMP) K18278 THI5; pyrimidine precursor biosynthesis enzyme D PAS_chr3_0037 Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAS_chr3_0648 Thiazole synthase, catalyzes formation of the thiazole moiety of thiamin pyrophosphate K03146 THI4; cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] D PAS_chr3_0843 Bifunctional enzyme K14154 THI6; thiamine-phosphate diphosphorylase / hydroxyethylthiazole kinase [EC:2.5.1.3 2.7.1.50] D PAS_chr2-2_0084 Repressible alkaline phosphatase, a glycoprotein localized to the vacuole K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAS_chr2-1_0103 One of three repressible acid phosphatases, a glycoprotein that is transported to the cell surface K01078 PHO; acid phosphatase [EC:3.1.3.2] D PAS_chr1-4_0151 Protein phosphotyrosine phosphatase K14394 ACP1; low molecular weight phosphotyrosine protein phosphatase [EC:3.1.3.2 3.1.3.48] D PAS_chr3_0052 Thiamine pyrophosphokinase, phosphorylates thiamine to produce the coenzyme thiamine pyrophosphate ( K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D PAS_chr3_0257 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ppa00740] D PAS_chr2-1_0736 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAS_chr3_0156 Diaminohydroxyphoshoribosylaminopyrimidine deaminase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D PAS_chr1-3_0239 DRAP deaminase, catalyzes the third step of the riboflavin biosynthesis pathway K14655 RIB2; tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:5.4.99.28] D PAS_chr3_0167 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), required for riboflavin biosynthesis K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D PAS_chr3_1037 Lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, also known as DMRL synthase) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PAS_chr4_0081 Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PAS_chr4_0996 hypothetical protein K00861 RFK; riboflavin kinase [EC:2.7.1.26] D PAS_chr2-1_0103 One of three repressible acid phosphatases, a glycoprotein that is transported to the cell surface K01078 PHO; acid phosphatase [EC:3.1.3.2] D PAS_chr1-4_0151 Protein phosphotyrosine phosphatase K14394 ACP1; low molecular weight phosphotyrosine protein phosphatase [EC:3.1.3.2 3.1.3.48] D PAS_chr1-3_0240 Flavin adenine dinucleotide (FAD) synthetase K00953 FLAD1; FAD synthetase [EC:2.7.7.2] D PAS_chr2-1_0760 Spermidine synthase, involved in biosynthesis of spermidine and also in biosynthesis of pantothenic K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:ppa00750] D PAS_chr1-1_0448 Pyridoxine (pyridoxamine) phosphate oxidase, has homologs in E. coli and Myxococcus xanthus K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D PAS_chr4_0981 hypothetical protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D PAS_chr2-1_0273 Protein involved in bud-site selection K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D PAS_chr1-4_0144 pyridoxal kinase BUD16 K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D PAS_chr4_0550 Putative protein of unknown function K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D PAS_chr3_0566 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAS_chr2-1_0269 Threonine synthase, conserved protein that catalyzes formation of threonine from 0-phosphohomoserine K01733 thrC; threonine synthase [EC:4.2.3.1] D PAS_chr1-4_0393 Member of a stationary phase-induced gene family K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D PAS_chr1-4_0392 hypothetical protein K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:ppa00760] D PAS_chr3_0915 Quinolinate phosphoribosyl transferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PAS_chr2-1_0221 Nicotinate phosphoribosyltransferase, acts in the salvage pathway of NAD+ biosynthesis K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PAS_chr1-1_0132 Purine nucleoside phosphorylase, specifically metabolizes inosine & guanosine nucleosides K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D PAS_chr2-2_0359 Nicotinamide riboside kinase K10524 NRK1_2; nicotinamide/nicotinate riboside kinase [EC:2.7.1.22 2.7.1.173] D PAS_chr2-1_0685 hypothetical protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAS_chr1-3_0130 Pyrimidine nucleotidase K18551 SDT1; pyrimidine and pyridine-specific 5'-nucleotidase [EC:3.1.3.-] D PAS_chr1-4_0181 Nicotinic acid mononucleotide adenylyltransferase, involved in pathways of NAD biosynthesis K06210 NMNAT; nicotinamide mononucleotide adenylyltransferase [EC:2.7.7.1 2.7.7.18] D PAS_chr4_0233 Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D PAS_chr3_0361 Nicotinamidase K01440 PNC1; nicotinamidase [EC:3.5.1.19] D PAS_chr1-1_0374 Conserved NAD+ dependent histone deacetylase of the Sirtuin family K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr1-4_0315 Member of silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr4_0474 Member of the Sir2 family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr2-1_0513 Member of the Sir2 family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr2-2_0049 NAD(+)-dependent histone deacetylase K11415 SIRT5; NAD-dependent protein deacetylase sirtuin 5 [EC:2.3.1.286] D PAS_chr4_0912 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D PAS_chr1-3_0024 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:ppa00770] D PAS_chr4_0228 Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAS_chr2-1_0864 hypothetical protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAS_chr1-1_0432 Acetohydroxyacid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PAS_chr1-4_0458 Dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PAS_chr3_1012 Ketopantoate hydroxymethyltransferase, required for pantothenic acid biosynthesis K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D PAS_chr4_0968 hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PAS_chr1-4_0198 Pantothenate synthase, also known as pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PAS_chr1-1_0324 pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33] D PAS_chr2-2_0204 Putative phosphopantothenoylcysteine synthetase (PPCS) K01922 PPCS; phosphopantothenate---cysteine ligase (ATP) [EC:6.3.2.51] D PAS_chr2-1_0871 hypothetical protein K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36] D PAS_chr4_0023 Putative pantetheine-phosphate adenylyltransferase (PPAT) K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PAS_chr4_0477 Putative dephospho-CoA kinase (DPCK) that catalyzes the final step in Coenzyme A biosynthesis K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PAS_chr1-3_0190 hypothetical protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D PAS_chr4_0793 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D PAS_chr4_0248 Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAS_chr3_0922 Polyamine oxidase, converts spermine to spermidine K13367 FMS1; polyamine oxidase [EC:1.5.3.17] D PAS_chr4_0823 Polyamine oxidase, converts spermine to spermidine K13367 FMS1; polyamine oxidase [EC:1.5.3.17] D PAS_chr2-1_0853 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr1-4_0064 Putative fatty aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr3_0987 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr4_0043 Mitochondrial aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAS_chr2-1_0453 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:ppa00780] D PAS_chr4_0511 Mitochondrial beta-keto-acyl synthase with possible role in fatty acid synthesis K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAS_chr2-1_0856 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAS_chr1-3_0052 Biotin synthase, catalyzes the conversion of dethiobiotin to biotin K01012 bioB; biotin synthase [EC:2.8.1.6] D PAS_chr3_0569 Biotin:apoprotein ligase, covalently modifies proteins with the addition of biotin K01942 HLCS; biotin---protein ligase [EC:6.3.4.9 6.3.4.10 6.3.4.11 6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ppa00785] D PAS_chr1-1_0243 Lipoyl ligase, involved in the modification of mitochondrial enzymes K23735 LIPT2; lipoyl(octanoyl) transferase 2 [EC:2.3.1.181] D PAS_chr1-4_0425 Protein involved in biosynthesis of the coenzyme lipoic acid K03644 lipA; lipoyl synthase [EC:2.8.1.8] D PAS_chr4_0691 Putative lipoate-protein ligase A family member K23750 LIP3; octanoyl-CoA:protein transferase [EC:2.3.1.-] D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr2-2_0294 E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D PAS_chr1-4_0593 E1 beta subunit of the pyruvate dehydrogenase (PDH) complex K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D PAS_chr1-1_0050 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAS_chr2-1_0089 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PAS_chr1-3_0094 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAS_FragB_0053 Glycine dehydrogenase [decarboxylating], mitochondrial K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAS_chr2-2_0492 hypothetical protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAS_FragB_0009 H subunit of the mitochondrial glycine decarboxylase complex K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ppa00790] D PAS_chr1-1_0062 GTP-cyclohydrolase I, catalyzes the first step in the folic acid biosynthetic pathway K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D PAS_chr2-2_0084 Repressible alkaline phosphatase, a glycoprotein localized to the vacuole K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAS_chr2-2_0302 Multifunctional enzyme of the folic acid biosynthesis pathway K13939 FOL1; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:4.1.2.25 2.7.6.3 2.5.1.15] D PAS_chr1-4_0697 hypothetical protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PAS_chr4_0196 Folylpolyglutamate synthetase, catalyzes extension of the glutamate chains of the folate coenzymes K01930 FPGS; folylpolyglutamate synthase [EC:6.3.2.17] D PAS_chr1-4_0009 Dihydrofolate synthetase K20457 DHFS; dihydrofolate synthase [EC:6.3.2.12] D PAS_chr2-1_0736 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAS_chr2-2_0075 Para-aminobenzoate (PABA) synthase K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D PAS_chr4_0940 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D PAS_chr1-4_0110 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D PAS_chr3_0687 hypothetical protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PAS_chr1-1_0456 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PAS_chr4_0951 hypothetical protein K15631 ABA3; molybdenum cofactor sulfurtransferase [EC:2.8.1.9] C 00670 One carbon pool by folate [PATH:ppa00670] D PAS_chr1-4_0697 hypothetical protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PAS_chr1-4_0632 C-1-tetrahydrofolate synthase, mitochondrial K00288 MTHFD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3] D PAS_chr1-3_0220 NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase K00295 MTD1; methylenetetrahydrofolate dehydrogenase (NAD+) [EC:1.5.1.15] D PAS_chr4_0415 Cytosolic serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_chr4_0587 Mitochondrial serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAS_chr2-1_0121 Phosphoribosyl-glycinamide transformylase, catalyzes a step in the 'de novo' purine nucleotide biosy K00601 E2.1.2.2; phosphoribosylglycinamide formyltransferase [EC:2.1.2.2] D PAS_chr2-1_0660 Enzyme of 'de novo' purine biosynthesis K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAS_chr1-1_0212 Methionyl-tRNA formyltransferase, catalyzes the formylation of initiator Met-tRNA in mitochondria K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PAS_chr2-2_0492 hypothetical protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAS_chr3_0996 Thymidylate synthase, required for de novo biosynthesis of pyrimidine deoxyribonucleotides K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PAS_chr2-2_0145 Isozyme of methylenetetrahydrofolate reductase K25004 MTHFR; methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.53] D PAS_chr2-2_0182 Isozyme of methylenetetrahydrofolate reductase K25004 MTHFR; methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.53] D PAS_chr4_0247 5,10-methenyltetrahydrofolate synthetase, involved in folic acid biosynthesis K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ppa00860] D PAS_chr2-1_0716 5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D PAS_chr1-1_0241 Mitochondrial glutamyl-tRNA synthetase, encoded by a nuclear gene K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr1-4_0598 Glutamyl-tRNA synthetase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr4_0418 Delta-aminolevulinate dehydratase, a homo-octameric enzyme K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PAS_chr1-4_0303 Phorphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D PAS_chr2-1_0533 Uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D PAS_chr3_0954 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D PAS_chr3_0943 Coproporphyrinogen III oxidase, an oxygen requiring enzyme K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D PAS_chr4_0055 Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D PAS_chr3_0264 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D PAS_chr1-3_0078 S-adenosyl-L-methionine uroporphyrinogen III transmethylase K00589 MET1; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D PAS_chr1-4_0222 Bifunctional dehydrogenase and ferrochelatase, involved in the biosynthesis of siroheme K02304 MET8; precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] D PAS_chr1-3_0194 Heme A:farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D PAS_chr4_0449 Protein required for the hydroxylation of heme O to form heme A K02259 COX15; heme a synthase [EC:1.17.99.9] D PAS_chr2-2_0290 Cytochrome c1 heme lyase, involved in maturation of cytochrome c1 K01764 HCCS; cytochrome c heme-lyase [EC:4.4.1.17] D PAS_chr2-2_0293 Cytochrome c heme lyase (holocytochrome c synthase), attaches heme to apo-cytochrome c K01764 HCCS; cytochrome c heme-lyase [EC:4.4.1.17] D PAS_chr1-4_0025 Frataxin, regulates mitochondrial iron accumulation K19054 FXN; frataxin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppa00130] D PAS_chr1-4_0608 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis K00838 ARO8; aromatic amino acid aminotransferase I / 2-aminoadipate transaminase [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5] D PAS_chr3_0291 Para hydroxybenzoate: polyprenyl transferase K06125 COQ2; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PAS_chr2-2_0303 Putative flavin-dependent monooxygenase, involved in ubiquinone (Coenzyme Q) biosynthesis K06126 COQ6; ubiquinone biosynthesis monooxygenase Coq6 [EC:1.14.13.-] D PAS_chr3_0169 O-methyltransferase, catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynth K00591 COQ3; polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase [EC:2.1.1.114 2.1.1.64] D PAS_chr2-1_0763 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase K06127 COQ5; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.201] D PAS_chr1-1_0169 Protein required for the ubiquinone (Coenzyme Q) biosynthesis K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D PAS_chr1-1_0449 Protein with similarity to members of a family of flavodoxin-like proteins K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D PAS_chr4_0335 hypothetical protein K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ppa00900] D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr2-1_0191 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-Co K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D PAS_chr2-2_0230 One of two isozymes of HMG-CoA reductase that catalyzes the conversion of HMG-CoA to mevalonate K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D PAS_chr1-3_0187 Mevalonate kinase, acts in the biosynthesis of isoprenoids and sterols, including ergosterol K00869 MVK; mevalonate kinase [EC:2.7.1.36] D PAS_chr2-2_0318 Phosphomevalonate kinase, an essential cytosolic enzyme K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D PAS_chr1-4_0003 Mevalonate pyrophosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D PAS_chr1-4_0429 Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (IPP isomerase) K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D PAS_chr1-4_0314 Farnesyl pyrophosphate synthetase K00787 FDPS; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PAS_chr3_1007 Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate K00804 GGPS1; geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PAS_chr4_0819 Hexaprenyl pyrophosphate synthetase K05355 hexPS; hexaprenyl-diphosphate synthase [EC:2.5.1.82 2.5.1.83] D PAS_chr1-1_0424 Cis-prenyltransferase involved in synthesis of long-chain dolichols K11778 DHDDS; ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87] D PAS_chr4_0818 Cis-prenyltransferase involved in dolichol synthesis K11778 DHDDS; ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87] D PAS_chr1-1_0301 Prenyltransferase, required for cell viability K19177 NUS1; dehydrodolichyl diphosphate syntase complex subunit NUS1 [EC:2.5.1.87] D PAS_chr1-3_0192 Alpha subunit of both the farnesyltransferase and type I geranylgeranyltransferase K05955 FNTA; protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [EC:2.5.1.58 2.5.1.59] D PAS_chr3_0636 Beta subunit of the CAAX farnesyltransferase (FTase) K05954 FNTB; protein farnesyltransferase subunit beta [EC:2.5.1.58] D PAS_chr4_0834 hypothetical protein K08658 RCE1; intramembrane prenyl-peptidase [EC:3.4.26.1] D PAS_chr2-2_0164 Highly conserved zinc metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D PAS_chr3_0130 Farnesyl cysteine-carboxyl methyltransferase, mediates the carboxyl methylation step during C-termin K00587 ICMT; protein-S-isoprenylcysteine O-methyltransferase [EC:2.1.1.100] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:ppa00909] D PAS_chr3_0317 Farnesyl-diphosphate farnesyl transferase (squalene synthase) K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D PAS_chr3_0124 Squalene epoxidase, catalyzes the epoxidation of squalene to 2,3-oxidosqualene K00511 SQLE; squalene monooxygenase [EC:1.14.14.17] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PAS_chr1-4_0150 Transketolase, similar to Tkl2p K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism [PATH:ppa00232] D PAS_chr2-2_0112 hypothetical protein K00106 XDH; xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] D PAS_chr2-2_0279 hypothetical protein K00365 uaZ; urate oxidase [EC:1.7.3.3] C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D PAS_chr3_1033 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00332 Carbapenem biosynthesis [PATH:ppa00332] D PAS_chr3_0294 Gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PAS_chr4_0665 Gamma-glutamyl phosphate reductase, catalyzes the second step in proline biosynthesis K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ppa00261] D PAS_chr1-4_0253 ATP sulfurylase, catalyzes the primary step of intracellular sulfate activation K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PAS_chr4_0150 Aspartate kinase (L-aspartate 4-P-transferase) K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAS_chr3_0471 Aspartic beta semi-aldehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis D PAS_chr4_0624 Non-essential protein of unknown function required for transcriptional induction K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0447 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_1192 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0561 Hexokinase-2 K00844 HK; hexokinase [EC:2.7.1.1] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D PAS_chr2-1_0224 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAS_chr2-1_0856 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis D PAS_chr1-4_0249 Acetyl-CoA carboxylase, biotin containing enzyme K11262 ACACA; acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14 2.1.3.15] C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:ppa00999] D PAS_chr3_0876 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PAS_chr3_0506 Pentafunctional arom protein K13830 ARO1; pentafunctional AROM polypeptide [EC:4.2.3.4 4.2.1.10 1.1.1.25 2.7.1.71 2.5.1.19] D PAS_chr4_0013 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation [PATH:ppa00791] D PAS_chr4_0173 Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities K14541 DUR1; urea carboxylase / allophanate hydrolase [EC:6.3.4.6 3.5.1.54] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ppa03020] D PAS_chr2-1_0125 RNA polymerase II second largest subunit B150, part of central core K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] D PAS_chr3_0568 RNA polymerase II largest subunit B220 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] D PAS_chr4_0344 RNA polymerase II third largest subunit B44, part of central core K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 D PAS_chr3_0244 RNA polymerase II subunit B12.5 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 D PAS_chr2-2_0104 RNA polymerase II subunit B32 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 D PAS_chr4_0906 RNA polymerase II subunit K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D PAS_chr1-4_0359 RNA polymerase II subunit B12.6 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 D PAS_chr4_0239 Second-largest subunit of RNA polymerase III K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] D PAS_chr4_0302 RNA polymerase III subunit C160, part of core enzyme K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] D PAS_chr4_0925 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 D PAS_chr4_0826 RNA polymerase subunit, common to RNA polymerase I and III K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 D PAS_chr2-2_0431 RNA polymerase III subunit C82 K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 D PAS_chr3_0574 hypothetical protein K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 D PAS_chr4_0031 RNA polymerase III subunit C37 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 D PAS_chr4_0697 RNA polymerase III subunit C34 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 D PAS_chr1-1_0259 hypothetical protein K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 D PAS_chr4_0735 RNA polymerase III subunit C25, required for transcription initiation K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 D PAS_chr3_1051 RNA polymerase III subunit C17 K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 D PAS_chr3_0942 RNA polymerase III subunit C11 K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 D PAS_chr1-4_0324 RNA polymerase I subunit A135 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] D PAS_chr2-2_0387 RNA polymerase I subunit K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] D PAS_chr2-1_0554 RNA polymerase I subunit A12.2 K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 D PAS_chr2-2_0083 hypothetical protein K03003 RPA34; DNA-directed RNA polymerase I subunit RPA34 D PAS_chr3_0707 RNA polymerase I subunit A43 K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 D PAS_chr3_0651 RNA polymerase I subunit A49 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 D PAS_chr3_0157 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 D PAS_chr2-2_0434 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 D PAS_chr2-2_0309 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 D PAS_chr1-1_0166 RNA polymerase subunit, found in RNA polymerase complexes I, II, and III K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 D PAS_chr2-1_0223 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 C 03022 Basal transcription factors [PATH:ppa03022] D PAS_chr2-1_0277 TFIIA large subunit K03122 TFIIA1; transcription initiation factor TFIIA large subunit D PAS_chr1-4_0121 Transcription initiation factor IIA small subunit K03123 TFIIA2; transcription initiation factor TFIIA small subunit D PAS_chr1-1_0059 Transcription factor TFIIB, a general transcription factor K03124 TFIIB; transcription initiation factor TFIIB D PAS_chr1-4_0183 TATA-binding protein, general transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PAS_chr1-4_0012 TFIID subunit (145 kDa) K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48] D PAS_chr2-2_0295 TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation K03128 TAF2; transcription initiation factor TFIID subunit 2 D PAS_FragD_0016 TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation K03132 TAF7; transcription initiation factor TFIID subunit 7 D PAS_chr2-1_0838 hypothetical protein K14649 TAF8; transcription initiation factor TFIID subunit 8 D PAS_chr1-4_0318 Transcription initiation factor TFIID subunit 3 K14650 TAF3; transcription initiation factor TFIID subunit 3 D PAS_chr1-4_0182 Subunit (145 kDa) of TFIID and SAGA complexes K03134 TAF10; transcription initiation factor TFIID subunit 10 D PAS_chr3_0453 Subunit (90 kDa) of TFIID and SAGA complexes K03130 TAF5; transcription initiation factor TFIID subunit 5 D PAS_chr2-1_0588 Subunit (61/68 kDa) of TFIID and SAGA complexes K03126 TAF12; transcription initiation factor TFIID subunit 12 D PAS_chr1-1_0095 Subunit (60 kDa) of TFIID and SAGA complexes K03131 TAF6; transcription initiation factor TFIID subunit 6 D PAS_chr2-1_0142 Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation K03133 TAF9B; transcription initiation factor TFIID subunit 9B D PAS_chr1-4_0265 hypothetical protein K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit D PAS_chr2-2_0231 hypothetical protein K03135 TAF11; transcription initiation factor TFIID subunit 11 D PAS_chr1-1_0012 TFIID subunit (19 kDa), involved in RNA polymerase II transcription initiation K03127 TAF13; transcription initiation factor TFIID subunit 13 D PAS_chr1-1_0082 RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm K14651 TAF15; transcription initiation factor TFIID subunit 15 D PAS_chr3_0178 TFIIE large subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D PAS_chr3_0737 TFIIE small subunit, involved in RNA polymerase II transcription initiation K03137 TFIIE2; transcription initiation factor TFIIE subunit beta D PAS_chr4_0518 TFIIF (Transcription Factor II) largest subunit K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha D PAS_chr1-4_0679 hypothetical protein K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] D PAS_chr4_0745 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 D PAS_chr1-4_0245 Component of the core form of RNA polymerase transcription factor TFIIH K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 D PAS_chr2-1_0043 Subunit of TFIIH complex, involved in transcription initiation, similar to 34 kDa subunit of human T K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 D PAS_chr4_0238 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 D PAS_chr1-4_0204 Component of the holoenzyme form of RNA polymerase transcription factor TFIIH K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D PAS_chr2-1_0797 5' to 3' DNA helicase, involved in nucleotide excision repair and transcription K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PAS_chr4_0061 Component of the RNA polymerase II general transcription and DNA repair factor TFIIH K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit D PAS_chr2-2_0041 Serine/threonine protein kinase, subunit of the transcription factor TFIIH K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] D PAS_chr4_0204 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D PAS_chr3_0575 Cyclin associated with protein kinase Kin28p K06634 CCNH; cyclin H C 03040 Spliceosome [PATH:ppa03040] D PAS_chr3_0644 RNA helicase in the DEAD-box family, necessary for prespliceosome formation K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7] D PAS_chr1-1_0019 Component of the TREX complex required for nuclear mRNA export K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] D PAS_chr3_0496 RNA-dependent ATPase in the DEAH-box family K12814 PRP2; pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:5.6.2.6] D PAS_chr1-4_0661 hypothetical protein K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6] D PAS_chr4_0942 hypothetical protein K12816 CDC40; pre-mRNA-processing factor 17 D PAS_chr1-4_0414 Splicing factor K12817 PRPF18; pre-mRNA-splicing factor 18 D PAS_chr1-4_0118 DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] D PAS_chr1-1_0021 hypothetical protein K12819 SLU7; pre-mRNA-processing factor SLU7 D PAS_chr1-4_0592 RNA helicase in the DEAH-box family K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D PAS_chr1-4_0686 Small nuclear ribonucleoprotein-associated protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' D PAS_chr4_0781 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1 D PAS_chr1-4_0228 Core Sm protein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2 D PAS_chr1-4_0614 Core Sm protein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 D PAS_chr2-1_0138 Core Sm protein Sm E K11097 SNRPE; small nuclear ribonucleoprotein E D PAS_chr2-2_0429 Core Sm protein Sm F K11098 SNRPF; small nuclear ribonucleoprotein F D PAS_FragB_0004 Small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G D PAS_chr2-2_0449 hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa D PAS_chr2-1_0450 Component of the U1 snRNP complex required for pre-mRNA splicing K11095 SNRPC; U1 small nuclear ribonucleoprotein C D PAS_chr1-4_0186 U1 snRNP protein involved in splicing K12821 PRPF40; pre-mRNA-processing factor 40 D PAS_chr4_0201 Essential ATP-dependent RNA helicase of the DEAD-box protein family K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D PAS_chr2-1_0818 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A' D PAS_chr3_0663 hypothetical protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B'' D PAS_chr4_0095 Subunit of the SF3a splicing factor complex, required for spliceosome assembly K12825 SF3A1; splicing factor 3A subunit 1 D PAS_chr1-3_0241 hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2 D PAS_chr3_0642 Subunit of the SF3a splicing factor complex, required for spliceosome assembly K12827 SF3A3; splicing factor 3A subunit 3 D PAS_chr2-1_0418 U2-snRNP associated splicing factor K12828 SF3B1; splicing factor 3B subunit 1 D PAS_chr2-1_0455 Protein required for assembly of U2 snRNP into the spliceosome, forms a complex with Hsh49p and Hsh1 K12829 SF3B2; splicing factor 3B subunit 2 D PAS_chr3_0992 Protein involved in pre-mRNA splicing K12830 SF3B3; splicing factor 3B subunit 3 D PAS_chr3_1252 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4 D PAS_chr1-1_0256 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5 D PAS_chr1-1_0060 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14 D PAS_chr3_0582 Zinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance K12834 PHF5A; PHD finger-like domain-containing protein 5A D PAS_chr2-1_0187 hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit D PAS_chr1-3_0064 hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit D PAS_chr4_0448 Lsm (Like Sm) protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 D PAS_chr1-1_0014 Lsm (Like Sm) protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 D PAS_chr1-3_0142 Lsm (Like Sm) protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 D PAS_chr1-3_0256 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 D PAS_chr3_0060 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 D PAS_chr1-1_0487 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 D PAS_chr4_0281 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D PAS_chr3_1147 hypothetical protein K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3 D PAS_chr2-2_0424 Splicing factor, component of the U4/U6-U5 snRNP complex K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4 D PAS_chr3_0755 Splicing factor, component of the U4/U6-U5 snRNP complex K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31 D PAS_chr3_1041 small nucleolar ribonucleoprotein SNU13 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 D PAS_chr1-3_0111 hypothetical protein K12846 SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3 D PAS_chr2-2_0340 Conserved zinc-finger domain protein involved in pre-mRNA splicing K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2 D PAS_chr4_0126 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1 D PAS_chr1-1_0383 Component of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23 D PAS_chr4_0782 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A D PAS_chr2-2_0100 GTPase component of U5 snRNP involved in mRNA splicing via spliceosome K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component D PAS_chr1-4_0051 RNA-dependent ATPase RNA helicase (DEIH box) K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6] D PAS_chr4_0538 Splicing factor, component of the U4/U6-U5 snRNP complex K12855 PRPF6; pre-mRNA-processing factor 6 D PAS_chr3_1077 Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing K12856 PRPF8; pre-mRNA-processing factor 8 D PAS_chr1-1_0317 hypothetical protein K12857 SNRNP40; Prp8 binding protein D PAS_chr2-2_0187 RNA helicase in the DEAD-box family, involved in RNA isomerization at the 5' splice site K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7] D PAS_chr3_0665 17-kDa component of the U4/U6aU5 tri-snRNP, plays an essential role in pre-mRNA splicing K12859 TXNL4A; U5 snRNP protein, DIM1 family D PAS_chr4_0764 Splicing factor associated with the spliceosome K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D PAS_chr1-3_0182 Essential splicing factor K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D PAS_chr4_0670 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27 D PAS_chr4_0083 Splicing factor that is found in the Cef1p subcomplex of the spliceosome K12862 PLRG1; pleiotropic regulator 1 D PAS_chr1-3_0268 hypothetical protein K12863 CWC15; protein CWC15 D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_1240 hypothetical protein K06063 SNW1; SNW domain-containing protein 1 D PAS_chr1-1_0196 Component of the spliceosome complex involved in pre-mRNA splicing K12867 SYF1; pre-mRNA-splicing factor SYF1 D PAS_chr4_0309 hypothetical protein K12868 SYF2; pre-mRNA-splicing factor SYF2 D PAS_chr3_0325 Essential splicesome assembly factor K12869 CRN; crooked neck D PAS_chr4_0020 Component of the spliceosome complex involved in pre-mRNA splicing K12870 ISY1; pre-mRNA-splicing factor ISY1 D PAS_chr1-1_0416 Pre-mRNA splicing factor K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11 D PAS_chr2-2_0144 Protein involved in bud-site selection K12873 BUD31; bud site selection protein 31 D PAS_chr1-4_0461 Nucleolar protein required for maturation of 18S rRNA K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D PAS_chr1-1_0255 Subunit of the THO complex K12879 THOC2; THO complex subunit 2 D PAS_chr3_0400 hypothetical protein K12880 THOC3; THO complex subunit 3 D PAS_chr1-4_0616 hypothetical protein K12881 THOC4; THO complex subunit 4 D PAS_chr3_0097 Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucle K12881 THOC4; THO complex subunit 4 D PAS_chr2-1_0662 Large subunit of the nuclear mRNA cap-binding protein complex K12882 NCBP1; nuclear cap-binding protein subunit 1 D PAS_chr1-1_0154 Small subunit of the heterodimeric cap binding complex that also contains Sto1p K12883 NCBP2; nuclear cap-binding protein subunit 2 B B 09122 Translation C 03010 Ribosome [PATH:ppa03010] D PAS_c131_0005 mitochondrial 37S ribosomal protein MRP4 K02967 RP-S2; small subunit ribosomal protein S2 D PAS_chr2-2_0377 Mitochondrial ribosomal component of the small subunit K02986 RP-S4; small subunit ribosomal protein S4 D PAS_chr2-2_0086 mitochondrial 37S ribosomal protein MRPS5 K02988 RP-S5; small subunit ribosomal protein S5 D PAS_c131_0014 hypothetical protein K02990 RP-S6; small subunit ribosomal protein S6 D PAS_chr1-1_0098 mitochondrial 37S ribosomal protein RSM7 K02992 RP-S7; small subunit ribosomal protein S7 D PAS_chr1-1_0385 mitochondrial 37S ribosomal protein MRPS8 K02994 RP-S8; small subunit ribosomal protein S8 D PAS_chr3_0946 mitochondrial 37S ribosomal protein RSM10 K02946 RP-S10; small subunit ribosomal protein S10 D PAS_chr4_0813 mitochondrial 37S ribosomal protein YmS18 K02948 RP-S11; small subunit ribosomal protein S11 D PAS_chr3_1120 putative mitochondrial 37S ribosomal protein MRPS12 K02950 RP-S12; small subunit ribosomal protein S12 D PAS_chr3_0520 putative mitochondrial 37S ribosomal protein SWS2 K02952 RP-S13; small subunit ribosomal protein S13 D PAS_chr1-1_0100 mitochondrial 37S ribosomal protein MRP2 K02954 RP-S14; small subunit ribosomal protein S14 D PAS_chr2-1_0384 mitochondrial 37S ribosomal protein MRPS28 K02956 RP-S15; small subunit ribosomal protein S15 D PAS_chr1-4_0320 mitochondrial 37S ribosomal protein MRPS16 K02959 RP-S16; small subunit ribosomal protein S16 D PAS_chr2-1_0683 Mitochondrial ribosomal protein of the small subunit K02961 RP-S17; small subunit ribosomal protein S17 D PAS_chr1-1_0296 Mitochondrial ribosomal protein of the small subunit K02963 RP-S18; small subunit ribosomal protein S18 D PAS_chr3_1117 mitochondrial 37S ribosomal protein RSM19 K02965 RP-S19; small subunit ribosomal protein S19 D PAS_chr1-4_0589 40S ribosomal protein S2 K02981 RP-S2e; small subunit ribosomal protein S2e D PAS_chr1-3_0115 40S ribosomal protein S3 K02985 RP-S3e; small subunit ribosomal protein S3e D PAS_chr4_0524 40S ribosomal protein S1 K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D PAS_chr4_0246 40S ribosomal protein S4 K02987 RP-S4e; small subunit ribosomal protein S4e D PAS_chr3_0762 40S ribosomal protein S5 K02989 RP-S5e; small subunit ribosomal protein S5e D PAS_chr4_0094 40S ribosomal protein S6 K02991 RP-S6e; small subunit ribosomal protein S6e D PAS_FragD_0014 40S ribosomal protein S6 K02991 RP-S6e; small subunit ribosomal protein S6e D PAS_chr4_0211 40S ribosomal protein S7 K02993 RP-S7e; small subunit ribosomal protein S7e D PAS_chr1-1_0439 40S ribosomal protein S8 K02995 RP-S8e; small subunit ribosomal protein S8e D PAS_chr1-4_0422 40S ribosomal protein S9 K02997 RP-S9e; small subunit ribosomal protein S9e D PAS_FragD_0013 40S ribosomal protein S10 K02947 RP-S10e; small subunit ribosomal protein S10e D PAS_chr2-1_0584 40S ribosomal protein S11 K02949 RP-S11e; small subunit ribosomal protein S11e D PAS_chr3_1200 40S ribosomal protein S12 K02951 RP-S12e; small subunit ribosomal protein S12e D PAS_chr4_0456 40S ribosomal protein S13 K02953 RP-S13e; small subunit ribosomal protein S13e D PAS_chr2-1_0481 40S ribosomal protein S14 K02955 RP-S14e; small subunit ribosomal protein S14e D PAS_chr1-4_0491 40S ribosomal protein S15 K02958 RP-S15e; small subunit ribosomal protein S15e D PAS_chr2-1_0482 40S ribosomal protein S22 K02957 RP-S15Ae; small subunit ribosomal protein S15Ae D PAS_chr1-1_0076 40S ribosomal protein S22 K02957 RP-S15Ae; small subunit ribosomal protein S15Ae D PAS_chr4_0414 40S ribosomal protein S16 K02960 RP-S16e; small subunit ribosomal protein S16e D PAS_chr2-1_0779 40S ribosomal protein S17 K02962 RP-S17e; small subunit ribosomal protein S17e D PAS_chr2-1_0783 40S ribosomal protein S18 K02964 RP-S18e; small subunit ribosomal protein S18e D PAS_chr1-4_0353 40S ribosomal protein S19 K02966 RP-S19e; small subunit ribosomal protein S19e D PAS_chr2-2_0257 40S ribosomal protein S20 K02969 RP-S20e; small subunit ribosomal protein S20e D PAS_chr3_0596 40S ribosomal protein S21 K02971 RP-S21e; small subunit ribosomal protein S21e D PAS_chr4_0348 40S ribosomal protein S23 K02973 RP-S23e; small subunit ribosomal protein S23e D PAS_chr4_0292 40S ribosomal protein S24 K02974 RP-S24e; small subunit ribosomal protein S24e D PAS_chr2-2_0326 40S ribosomal protein S25 K02975 RP-S25e; small subunit ribosomal protein S25e D PAS_chr2-1_0362 40S ribosomal protein S26 K02976 RP-S26e; small subunit ribosomal protein S26e D PAS_chr1-1_0283 40S ribosomal protein S27 K02978 RP-S27e; small subunit ribosomal protein S27e D PAS_chr2-1_0634 40S ribosomal protein S27 K02978 RP-S27e; small subunit ribosomal protein S27e D PAS_chr3_0722 ubiquitin-40S ribosomal protein S31 fusion protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PAS_chr1-4_0235 40S ribosomal protein S28 K02979 RP-S28e; small subunit ribosomal protein S28e D PAS_chr3_1174 40S ribosomal protein S28 K02979 RP-S28e; small subunit ribosomal protein S28e D PAS_chr1-4_0504 40S ribosomal protein S29 K02980 RP-S29e; small subunit ribosomal protein S29e D PAS_chr1-4_0471 40S ribosomal protein S0 K02998 RP-SAe; small subunit ribosomal protein SAe D PAS_chr3_0474 mitochondrial 54S ribosomal protein MRPL1 K02863 RP-L1; large subunit ribosomal protein L1 D PAS_chr1-1_0192 mitochondrial 54S ribosomal protein RML2 K02886 RP-L2; large subunit ribosomal protein L2 D PAS_chr2-2_0240 mitochondrial 54S ribosomal protein YmL9 K02906 RP-L3; large subunit ribosomal protein L3 D PAS_chr2-1_0890 hypothetical protein K02926 RP-L4; large subunit ribosomal protein L4 D PAS_chr4_0799 mitochondrial 54S ribosomal protein YmL7/YmL5 K02931 RP-L5; large subunit ribosomal protein L5 D PAS_chr2-2_0241 mitochondrial 54S ribosomal protein YmL16 K02933 RP-L6; large subunit ribosomal protein L6 D PAS_chr1-4_0358 putative mitochondrial 54S ribosomal protein MNP1 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PAS_chr3_1101 Mitochondrial ribosomal protein of the large subunit K02864 RP-L10; large subunit ribosomal protein L10 D PAS_chr1-3_0107 mitochondrial 54S ribosomal protein YmL19 K02867 RP-L11; large subunit ribosomal protein L11 D PAS_chr4_0905 mitochondrial 54S ribosomal protein YmL23 K02871 RP-L13; large subunit ribosomal protein L13 D PAS_chr2-2_0417 mitochondrial 54S ribosomal protein YmL10/YmL18 K02876 RP-L15; large subunit ribosomal protein L15 D PAS_chr3_0465 Mitochondrial ribosomal protein of the large subunit K02884 RP-L19; large subunit ribosomal protein L19 D PAS_chr3_0221 mitochondrial 54S ribosomal protein YmL49 K02888 RP-L21; large subunit ribosomal protein L21 D PAS_chr2-1_0126 mitochondrial 54S ribosomal protein YmL41 K02892 RP-L23; large subunit ribosomal protein L23 D PAS_chr4_0956 hypothetical protein K02895 RP-L24; large subunit ribosomal protein L24 D PAS_FragB_0037 54S ribosomal protein L24, mitochondrial K02902 RP-L28; large subunit ribosomal protein L28 D PAS_chr3_0322 Essential type II topoisomerase K02907 RP-L30; large subunit ribosomal protein L30 D PAS_chr4_0845 mitochondrial 54S ribosomal protein YmL32 K02911 RP-L32; large subunit ribosomal protein L32 D PAS_chr3_1135 mitochondrial 54S ribosomal protein YmL39 K02913 RP-L33; large subunit ribosomal protein L33 D PAS_chr3_0473 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34 D PAS_chr1-1_0144 Homolog of the prokaryotic ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PAS_chr4_0139 60S ribosomal protein L3 K02925 RP-L3e; large subunit ribosomal protein L3e D PAS_chr1-3_0034 60S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e D PAS_chr1-1_0345 60S ribosomal protein L5 K02932 RP-L5e; large subunit ribosomal protein L5e D PAS_chr4_0131 60S ribosomal protein L6 K02934 RP-L6e; large subunit ribosomal protein L6e D PAS_chr2-2_0229 60S ribosomal protein L6 K02934 RP-L6e; large subunit ribosomal protein L6e D PAS_chr3_0038 Nucleolar protein with similarity to large ribosomal subunit L7 proteins K02937 RP-L7e; large subunit ribosomal protein L7e D PAS_chr2-1_0022 60S ribosomal protein L7 K02937 RP-L7e; large subunit ribosomal protein L7e D PAS_chr1-1_0216 60S ribosomal protein L8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PAS_chr1-1_0219 60S ribosomal protein L2 K02938 RP-L8e; large subunit ribosomal protein L8e D PAS_chr4_0107 60S ribosomal protein L2 K02938 RP-L8e; large subunit ribosomal protein L8e D PAS_chr1-1_0382 60S ribosomal protein L9 K02940 RP-L9e; large subunit ribosomal protein L9e D PAS_chr1-1_0236 60S ribosomal protein L9 K02940 RP-L9e; large subunit ribosomal protein L9e D PAS_chr2-2_0054 60S ribosomal protein L10 K02866 RP-L10e; large subunit ribosomal protein L10e D PAS_chr1-1_0183 60S ribosomal protein L1 K02865 RP-L10Ae; large subunit ribosomal protein L10Ae D PAS_chr4_0669 60S ribosomal protein L11 K02868 RP-L11e; large subunit ribosomal protein L11e D PAS_chr1-1_0189 60S ribosomal protein L12 K02870 RP-L12e; large subunit ribosomal protein L12e D PAS_chr4_0413 60S ribosomal protein L13 K02873 RP-L13e; large subunit ribosomal protein L13e D PAS_chr4_0208 60S ribosomal protein L16 K02872 RP-L13Ae; large subunit ribosomal protein L13Ae D PAS_c131_0011 60S ribosomal protein L14 K02875 RP-L14e; large subunit ribosomal protein L14e D PAS_chr2-1_0658 60S ribosomal protein L15 K02877 RP-L15e; large subunit ribosomal protein L15e D PAS_chr2-2_0109 60S ribosomal protein L17 K02880 RP-L17e; large subunit ribosomal protein L17e D PAS_chr1-4_0352 60S ribosomal protein L18 K02883 RP-L18e; large subunit ribosomal protein L18e D PAS_chr3_0054 60S ribosomal protein L20 K02882 RP-L18Ae; large subunit ribosomal protein L18Ae D PAS_chr3_0091 60S ribosomal protein L19 K02885 RP-L19e; large subunit ribosomal protein L19e D PAS_chr1-4_0680 60S ribosomal protein L21 K02889 RP-L21e; large subunit ribosomal protein L21e D PAS_chr4_0041 60S ribosomal protein L22 K02891 RP-L22e; large subunit ribosomal protein L22e D PAS_chr1-3_0300 60S ribosomal protein L23 K02894 RP-L23e; large subunit ribosomal protein L23e D PAS_chr4_0814 60S ribosomal protein L25 K02893 RP-L23Ae; large subunit ribosomal protein L23Ae D PAS_chr2-1_0086 60S ribosomal protein L24 K02896 RP-L24e; large subunit ribosomal protein L24e D PAS_chr2-2_0412 ribosome biogenesis protein RLP24 K02896 RP-L24e; large subunit ribosomal protein L24e D PAS_chr4_0267 60S ribosomal protein L26 K02898 RP-L26e; large subunit ribosomal protein L26e D PAS_chr2-1_0728 60S ribosomal protein L28 K02900 RP-L27Ae; large subunit ribosomal protein L27Ae D PAS_chr4_0374 60S ribosomal protein L29 K02905 RP-L29e; large subunit ribosomal protein L29e D PAS_chr2-1_0087 60S ribosomal protein L30 K02908 RP-L30e; large subunit ribosomal protein L30e D PAS_chr4_0180 60S ribosomal protein L31 K02910 RP-L31e; large subunit ribosomal protein L31e D PAS_chr3_1057 60S ribosomal protein L32 K02912 RP-L32e; large subunit ribosomal protein L32e D PAS_chr1-4_0239 60S ribosomal protein L34 K02915 RP-L34e; large subunit ribosomal protein L34e D PAS_chr1-1_0302 60S ribosomal protein L35 K02918 RP-L35e; large subunit ribosomal protein L35e D PAS_chr1-4_0275 60S ribosomal protein L33 K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D PAS_FragB_0036 60S ribosomal protein L36 K02920 RP-L36e; large subunit ribosomal protein L36e D PAS_chr1-1_0337 60S ribosomal protein L37 K02922 RP-L37e; large subunit ribosomal protein L37e D PAS_chr3_0335 60S ribosomal protein L43 K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D PAS_chr1-4_0412 60S ribosomal protein L38 K02923 RP-L38e; large subunit ribosomal protein L38e D PAS_chr2-1_0483 60S ribosomal protein L39 K02924 RP-L39e; large subunit ribosomal protein L39e D PAS_chr2-1_0486 ubiquitin-60S ribosomal protein L40 fusion protein K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PAS_chr3_0194 60S ribosomal protein L42 K02929 RP-L44e; large subunit ribosomal protein L44e D PAS_chr1-3_0068 60S acidic ribosomal protein P0 K02941 RP-LP0; large subunit ribosomal protein LP0 D PAS_chr4_0412 60S acidic ribosomal protein P1 K02942 RP-LP1; large subunit ribosomal protein LP1 D PAS_chr4_0982 60S acidic ribosomal protein P1 K02942 RP-LP1; large subunit ribosomal protein LP1 D PAS_chr1-4_0490 60S acidic ribosomal protein P2 K02943 RP-LP2; large subunit ribosomal protein LP2 C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppa00970] D PAS_chr1-1_0241 Mitochondrial glutamyl-tRNA synthetase, encoded by a nuclear gene K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr1-4_0598 Glutamyl-tRNA synthetase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr2-1_0400 Putative protein similar to bacterial glutamyl-tRNA amidotransferases K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PAS_chr4_0705 Protein required for mitochondrial translation K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PAS_chr4_0715 Putative protein of unknown function K03865 GTF1; glutamyl-tRNA(Gln) amidotransferase subunit F [EC:6.3.5.7] D PAS_chr3_0285 Glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAS_chr3_0462 Cytoplasmic alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAS_chr1-4_0095 Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAS_chr4_0101 Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAS_chr1-1_0390 Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAS_chr1-1_0392 Mitochondrial asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAS_chr3_0376 Cytoplasmic and mitochondrial glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PAS_chr2-1_0673 Mitochondrial threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAS_chr2-2_0238 Threonyl-tRNA synthetase, essential cytoplasmic protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAS_chr1-4_0463 Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAS_chr1-4_0104 Probable mitochondrial seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAS_chr1-4_0514 hypothetical protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAS_chr2-1_0396 Mitochondrial methionyl-tRNA synthetase (MetRS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAS_chr2-1_0346 Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAS_chr1-1_0212 Methionyl-tRNA formyltransferase, catalyzes the formylation of initiator Met-tRNA in mitochondria K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PAS_chr3_0754 Mitochondrial and cytoplasmic valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAS_chr4_0393 Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAS_chr1-4_0534 Mitochondrial leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAS_chr2-1_0123 Mitochondrial isoleucyl-tRNA synthetase, null mutant is deficient in respiratory growth K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAS_chr4_0709 isoleucine-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAS_chr3_0949 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAS_chr1-1_0047 Mitochondrial lysine-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAS_chr3_0166 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAS_chr2-2_0209 Protein with similarity to tRNA synthetases K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAS_chr1-1_0391 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAS_chr1-3_0244 Cytoplasmic and mitochondrial histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAS_chr1-4_0558 Mitochondrial phenylalanyl-tRNA synthetase alpha subunit, active as a monomer K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAS_chr4_0276 Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAS_chr3_0144 Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate ac K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAS_chr4_0522 Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAS_chr3_1110 Mitochondrial tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAS_chr3_0165 Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates tryptophanyl-tRNA K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAS_chr2-2_0245 Mitochondrial tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport [PATH:ppa03013] D PAS_chr4_0800 Cytoplasmic nucleoporin required for polyadenylated RNA export but not for protein import K18723 GLE1; nucleoporin GLE1 D PAS_chr1-3_0074 Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] D PAS_chr4_0710 Component of the nuclear pore complex K14298 RAE1; mRNA export factor D PAS_chr1-1_0232 Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore K14297 NUP98; nuclear pore complex protein Nup98-Nup96 D PAS_chr4_0719 GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport K14319 RANGAP1; Ran GTPase-activating protein 1 D PAS_chr2-1_0714 SUMO-conjugating enzyme involved in the Smt3p conjugation pathway K10577 UBE2I; ubiquitin-conjugating enzyme E2 I D PAS_chr3_1039 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) K14304 NUP85; nuclear pore complex protein Nup85 D PAS_chr1-3_0057 Component of both the Nup84 nuclear pore sub-complex and of the COPII complex K14004 SEC13; protein transport protein SEC13 D PAS_chr3_1070 Subunit of the nuclear pore complex (NPC) K14301 NUP107; nuclear pore complex protein Nup107 D PAS_chr3_0993 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) K14300 NUP133; nuclear pore complex protein Nup133 D PAS_chr2-2_0385 Essential nucleoporin K18720 NUP145; nucleoporin NUP145 D PAS_chr1-1_0224 Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex K14299 SEH1; nucleoporin SEH1 D PAS_chr3_0825 Essential component of the nuclear pore complex, which mediates nuclear import and export K14306 NUP62; nuclear pore complex protein Nup62 D PAS_chr3_0431 Subunit of the Nsp1p-Nup57p-Nup49p-Nic96p subcomplex of the nuclear pore complex (NPC) K14307 NUPL1; nucleoporin p58/p45 D PAS_chr4_0354 Nucleoporin, essential subunit of the nuclear pore complex (NPC) K14308 NUP54; nuclear pore complex protein Nup54 D PAS_chr2-2_0270 Essential structural subunit of the nuclear pore complex (NPC) K14310 NUP205; nuclear pore complex protein Nup205 D PAS_chr1-3_0071 Subunit of the nuclear pore complex (NPC) K14311 NUP188; nuclear pore complex protein Nup188 D PAS_chr4_0163 Abundant subunit of the nuclear pore complex (NPC) K14312 NUP155; nuclear pore complex protein Nup155 D PAS_chr3_1204 hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93 D PAS_chr4_0657 Nuclear pore complex subunit, part of a subcomplex also containing Nup53p, Nup170p, and Pse1p K18717 ASM4; nucleoporin ASM4 D PAS_chr2-1_0154 Nuclear envelope protein with multiple putative transmembrane domains K14315 NDC1; nucleoporin NDC1 D PAS_chr3_0715 Nuclear pore membrane glycoprotein K18725 POM152; nucleoporin POM152 D PAS_chr3_0229 hypothetical protein K20724 TMEM33; transmembrane protein 33 D PAS_chr4_0551 hypothetical protein K20724 TMEM33; transmembrane protein 33 D PAS_chr4_0316 Myosin-like protein associated with the nuclear envelope K09291 TPR; nucleoprotein TPR D PAS_chr2-2_0325 Nucleoporin involved in nucleocytoplasmic transport K18722 NUP2; nucleoporin NUP2 D PAS_chr3_0524 Essential component of the nuclear pore complex K18721 NUP1; nucleoporin NUP1 D PAS_chr1-4_0603 hypothetical protein K18718 NUP60; nucleoporin NUP60 D PAS_chr3_0612 Karyopherin alpha homolog, forms a dimer with karyopherin beta Kap95p K15042 KPNA5_6; importin subunit alpha-6/7 D PAS_chr4_0263 Karyopherin beta, forms a dimeric complex with Srp1p (Kap60p) K14293 KPNB1; importin subunit beta-1 D PAS_chr1-3_0022 Transportin, cytosolic karyopherin beta 2 K18752 TNPO1; transportin-1 D PAS_chr2-1_0137 Nuclear import receptor, mediates the nuclear localization of proteins involved in mRNA-nucleus expo K15436 TRPO3; transportin-3 D PAS_chr1-1_0409 Karyopherin beta, mediates nuclear import of ribosomal proteins K20221 IPO4; importin-4 D PAS_chr1-3_0237 Karyopherin/importin that interacts with the nuclear pore complex K20222 IPO5; importin-5 D PAS_chr2-1_0677 Karyopherin, a carrier protein involved in nuclear import of proteins K20223 IPO7; importin-7 D PAS_chr3_0883 Nuclear transport factor (karyopherin) K20223 IPO7; importin-7 D PAS_chr1-4_0595 Karyopherin, responsible for nuclear import of Spt15p, histones H2A and H2B, and Nap1p K20224 IPO9; importin-9 D PAS_chr2-1_0220 Karyopherin with a role in the assembly or export of 60S ribosomal subunits K25201 IPO11; importin-11 D PAS_chr2-2_0243 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus K14290 XPO1; exportin-1 D PAS_chr3_0767 Nuclear envelope protein that mediates the nuclear export of importin alpha (Srp1p) K18423 CSE1; exportin-2 (importin alpha re-exporter) D PAS_chr2-1_0617 Nuclear pore protein involved in nuclear export of pre-tRNA K14288 XPOT; exportin-T D PAS_chr4_0654 Karyopherin involved in nuclear import and export K14289 XPO5; exportin-5 D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_FragB_0052 Translational elongation factor EF-1 alpha K03231 EEF1A; elongation factor 1-alpha D PAS_chr2-1_0662 Large subunit of the nuclear mRNA cap-binding protein complex K12882 NCBP1; nuclear cap-binding protein subunit 1 D PAS_chr1-1_0154 Small subunit of the heterodimeric cap binding complex that also contains Sto1p K12883 NCBP2; nuclear cap-binding protein subunit 2 D PAS_chr2-1_0380 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D PAS_chr1-4_0461 Nucleolar protein required for maturation of 18S rRNA K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D PAS_chr1-4_0616 hypothetical protein K12881 THOC4; THO complex subunit 4 D PAS_chr3_0097 Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucle K12881 THOC4; THO complex subunit 4 D PAS_chr3_0657 ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] D PAS_chr4_0894 Nonsense-mediated mRNA decay protein 2 K14327 UPF2; regulator of nonsense transcripts 2 D PAS_chr4_0394 Poly(A)RNA binding protein involved in nuclear mRNA export K14284 NXF; nuclear RNA export factor D PAS_chr4_0528 mRNA transport regulator, essential nuclear protein K14543 MTR2; mRNA transport regulator MTR2 D PAS_chr1-1_0019 Component of the TREX complex required for nuclear mRNA export K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] D PAS_chr2-1_0528 hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1 D PAS_chr1-1_0255 Subunit of the THO complex K12879 THOC2; THO complex subunit 2 D PAS_chr3_0400 hypothetical protein K12880 THOC3; THO complex subunit 3 C 03015 mRNA surveillance pathway [PATH:ppa03015] D PAS_chr2-1_0662 Large subunit of the nuclear mRNA cap-binding protein complex K12882 NCBP1; nuclear cap-binding protein subunit 1 D PAS_chr1-1_0154 Small subunit of the heterodimeric cap binding complex that also contains Sto1p K12883 NCBP2; nuclear cap-binding protein subunit 2 D PAS_chr1-4_0461 Nucleolar protein required for maturation of 18S rRNA K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D PAS_chr1-4_0616 hypothetical protein K12881 THOC4; THO complex subunit 4 D PAS_chr3_0097 Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucle K12881 THOC4; THO complex subunit 4 D PAS_chr1-3_0074 Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] D PAS_chr4_0800 Cytoplasmic nucleoporin required for polyadenylated RNA export but not for protein import K18723 GLE1; nucleoporin GLE1 D PAS_chr4_0394 Poly(A)RNA binding protein involved in nuclear mRNA export K14284 NXF; nuclear RNA export factor D PAS_chr4_0528 mRNA transport regulator, essential nuclear protein K14543 MTR2; mRNA transport regulator MTR2 D PAS_chr1-1_0019 Component of the TREX complex required for nuclear mRNA export K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] D PAS_chr2-1_0528 hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1 D PAS_chr2-1_0414 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM) K14396 PABPN1; polyadenylate-binding protein 2 D PAS_chr2-1_0233 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM) K14396 PABPN1; polyadenylate-binding protein 2 D PAS_chr1-4_0645 Poly(A) polymerase K14376 PAP; poly(A) polymerase [EC:2.7.7.19] D PAS_chr3_0742 Subunit of cleavage factor I (CFI) K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] D PAS_chr3_0256 mRNA 3' end processing factor K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D PAS_chr1-3_0183 RNA-binding subunit of the mRNA cleavage and polyadenylation factor K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 D PAS_chr2-1_0816 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 D PAS_chr1-1_0015 Putative endoribonuclease K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] D PAS_chr1-1_0249 Essential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 D PAS_chr3_0333 Subunit of cleavage polyadenylation factor (CPF) K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 D PAS_chr1-4_0122 Essential conserved subunit of CPF (cleavage and polyadenylation factor) K15541 MPE1; protein MPE1 D PAS_FragB_0063 Polyadenylation factor subunit 2 K15542 PFS2; polyadenylation factor subunit 2 D PAS_chr1-1_0206 Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 K14962 WDR82; COMPASS component SWD2 D PAS_chr2-1_0635 Catalytic subunit of type 1 serine/threonine protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr2-1_0407 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr1-1_0153 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr1-4_0523 Transcription/RNA-processing factor K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D PAS_chr2-2_0134 Cleavage and polyadenylation factor I (CF I) component K14407 CSTF2; cleavage stimulation factor subunit 2 D PAS_chr2-2_0133 hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2 D PAS_chr2-1_0232 Cleavage and polyadenylation factor I (CF I) component involved in cleavage and polyadenylation of M K14408 CSTF3; cleavage stimulation factor subunit 3 D PAS_chr3_0641 Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF K06100 SYMPK; symplekin D PAS_chr1-4_0355 Subunit of cleavage factor I K14411 MSI; RNA-binding protein Musashi D PAS_chr2-1_0097 Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between th K13126 PABPC; polyadenylate-binding protein D PAS_chr1-4_0283 Poly(A) binding protein, part of the 3'-end RNA-processing complex K13126 PABPC; polyadenylate-binding protein D PAS_chr4_0727 Polypeptide release factor involved in translation termination K03265 ETF1; peptide chain release factor subunit 1 D PAS_chr3_0398 Translation termination factor eRF3 K03267 ERF3; peptide chain release factor subunit 3 D PAS_chr3_0657 ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] D PAS_chr4_0894 Nonsense-mediated mRNA decay protein 2 K14327 UPF2; regulator of nonsense transcripts 2 D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr4_0494 Regulatory subunit A of the heterotrimeric protein phosphatase 2A K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A D PAS_chr2-1_0831 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B D PAS_chr2-2_0274 B-type regulatory subunit of protein phosphatase 2A (PP2A) K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D PAS_chr2-1_0730 Endoribonuclease K06965 PELO; protein pelota C 03008 Ribosome biogenesis in eukaryotes [PATH:ppa03008] D PAS_chr4_0402 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_chr2-2_0247 Beta' regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_chr1-4_0262 Alpha' catalytic subunit of casein kinase 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PAS_chr3_0549 Alpha' catalytic subunit of casein kinase 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PAS_chr4_0831 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D PAS_chr1-1_0349 Essential protein involved in rRNA processing and ribosome biogenesis K14545 RRP7; ribosomal RNA-processing protein 7 D PAS_chr3_0885 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D PAS_chr1-1_0065 Component of the U2 snRNP K14547 UTP8; U3 small nucleolar RNA-associated protein 8 D PAS_chr1-1_0199 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D PAS_chr1-4_0640 U3 small nucleolar RNA-associated protein K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D PAS_chr2-2_0045 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D PAS_chr2-1_0680 hypothetical protein K14551 UTP9; U3 small nucleolar RNA-associated protein 9 D PAS_chr2-1_0222 U3 snoRNP protein, component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRN K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D PAS_chr2-1_0863 hypothetical protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D PAS_chr1-1_0004 U3 small nucleolar RNA-associated protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D PAS_chr3_0782 Nucleolar protein, component of the small subunit (SSU) processome K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D PAS_chr2-1_0606 Nucleolar protein, specifically associated with the U3 snoRNA K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D PAS_chr2-1_0781 Nucleolar protein, component of the small subunit (SSU) processome K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D PAS_chr2-1_0267 Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA K14558 PWP2; periodic tryptophan protein 2 D PAS_chr2-1_0861 hypothetical protein K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D PAS_chr2-2_0242 Component of the SSU processome, which is required for pre-18S rRNA processing K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D PAS_chr1-1_0046 Component of the SSU processome, which is required for pre-18S rRNA processing K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D PAS_chr4_0808 rRNA methyltransferase NOP1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D PAS_chr1-4_0403 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes K14564 NOP56; nucleolar protein 56 D PAS_chr4_0278 Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis K14565 NOP58; nucleolar protein 58 D PAS_chr3_1041 small nucleolar ribonucleoprotein SNU13 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 D PAS_chr2-2_0149 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D PAS_chr4_0796 Nuclear protein related to mammalian high mobility group (HMG) proteins K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D PAS_chr2-1_0648 Protein component of the H/ACA snoRNP pseudouridylase complex K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D PAS_chr4_0747 Constituent of small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D PAS_chr3_0131 Essential nucleolar protein that is a component of the SSU (small subunit) processome involved in th K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D PAS_chr4_0667 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D PAS_chr4_0127 RNAase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAS_chr1-1_0335 Member of the alpha/beta knot fold methyltransferase superfamily K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D PAS_chr1-1_0179 Essential conserved nucleolar GTP-binding protein required for synthesis of 40S ribosomal subunits K14569 BMS1; ribosome biogenesis protein BMS1 D PAS_chr2-2_0360 Essential protein of unknown function K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D PAS_chr3_0268 RNA terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D PAS_chr1-4_0517 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] D PAS_chr1-4_0176 hypothetical protein K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5] D PAS_chr4_0690 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PAS_chr3_0927 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PAS_chr2-1_0295 Subunit of both RNase MRP K14526 POP7; ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5] D PAS_chr4_0566 Subunit of both RNase MRP and nuclear RNase P K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PAS_chr2-1_0387 Subunit of RNase MRP K14532 RMP1; ribonuclease MRP protein subunit RMP1 D PAS_chr3_1050 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] D PAS_chr1-1_0377 RNA exonuclease K14570 REX1; RNA exonuclease [EC:3.1.-.-] D PAS_chr3_0681 RNA exonuclease, required for U4 snRNA maturation K13288 orn; oligoribonuclease [EC:3.1.-.-] D PAS_chr3_0432 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D PAS_chr3_0846 Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D PAS_chr4_0105 Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus K06943 NOG1; nucleolar GTP-binding protein D PAS_chr4_0423 Putative GTPase that associates with pre-60S ribosomal subunits in the nucleolus K14537 NUG2; nuclear GTP-binding protein D PAS_chr1-1_0058 GTPase that associates with nuclear 60S pre-ribosomes, required for export of 60S ribosomal subunits K14538 NUG1; nuclear GTP-binding protein D PAS_chr4_0419 Putative ATPase of the AAA family K14571 RIX7; ribosome biogenesis ATPase D PAS_chr1-1_0187 Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex K14572 MDN1; midasin D PAS_chr3_0212 Nucleolar protein K14573 NOP4; nucleolar protein 4 D PAS_chr3_1032 Essential nuclear protein involved in proteasome maturation and synthesis of 40S ribosomal subunits K11883 NOB1; RNA-binding protein NOB1 D PAS_chr2-1_0219 Protein kinase involved in regulating diverse events including vesicular trafficking, DNA repair, an K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_chr2-2_0243 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus K14290 XPO1; exportin-1 D PAS_chr2-1_0380 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D PAS_chr4_0394 Poly(A)RNA binding protein involved in nuclear mRNA export K14284 NXF; nuclear RNA export factor D PAS_chr4_0528 mRNA transport regulator, essential nuclear protein K14543 MTR2; mRNA transport regulator MTR2 D PAS_chr1-3_0101 Constituent of 66S pre-ribosomal particles, has similarity to human translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D PAS_chr2-1_0410 Essential protein involved in 60S ribosome maturation K14574 SDO1; ribosome maturation protein SDO1 D PAS_chr1-4_0015 GTPase K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] D PAS_chr1-1_0186 Putative GTPase involved in 60S ribosomal subunit biogenesis K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D PAS_chr2-1_0710 ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex K14575 AFG2; AAA family ATPase D PAS_chr2-1_0493 Essential NTPase required for small ribosome subunit synthesis K18532 AK6; adenylate kinase [EC:2.7.4.3] D PAS_chr3_0112 Essential serine kinase involved in cell cycle progression and processing of the 20S pre-rRNA into M K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PAS_chr4_0195 Essential serine kinase involved in the processing of the 20S pre-rRNA into mature 18S rRNA K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ppa03060] D PAS_chr1-4_0577 Mitochondrial inner membrane insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAS_chr4_0322 Signal recognition particle (SRP) subunit (homolog of mammalian SRP54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PAS_chr1-4_0629 Subunit of the Ssh1 translocon complex K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr1-3_0202 Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p) K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr2-2_0210 Beta subunit of the Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p) K09481 SEC61B; protein transport protein SEC61 subunit beta D PAS_chr1-1_0023 hypothetical protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D PAS_chr3_1014 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K12275 SEC62; translocation protein SEC62 D PAS_chr4_0395 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K09540 SEC63; translocation protein SEC63 D PAS_chr2-1_0140 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding I K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10] D PAS_chr1-4_0210 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex K03108 SRP72; signal recognition particle subunit SRP72 D PAS_chr1-4_0134 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex K03107 SRP68; signal recognition particle subunit SRP68 D PAS_chr3_0534 Subunit of the signal recognition particle (SRP), involved in protein targeting to the ER K03105 SRP19; signal recognition particle subunit SRP19 D PAS_chr2-1_0379 Signal recognition particle (SRP) receptor-alpha subunit K13431 SRPR; signal recognition particle receptor subunit alpha D PAS_chr2-1_0636 Signal recognition particle (SRP) receptor beta subunit K12272 SRPRB; signal recognition particle receptor subunit beta D PAS_chr4_0405 Guanine nucleotide exchange factor for Gpa1p K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PAS_chr3_0280 hypothetical protein K23387 GET4; golgi to ER traffic protein 4 D PAS_chr1-4_0113 hypothetical protein K16365 SGTA; small glutamine-rich tetratricopeptide repeat-containing protein alpha D PAS_chr4_0403 hypothetical protein K22384 GET1; tail-anchored protein insertion receptor D PAS_chr3_0197 hypothetical protein K22386 GET2; GET complex subunit GET2 D PAS_chr3_1168 hypothetical protein K27164 SND2; SRP-independent targeting protein 2 D PAS_chr1-1_0491 hypothetical protein K12946 SPCS1; signal peptidase complex subunit 1 [EC:3.4.-.-] D PAS_chr2-1_0589 Subunit of signal peptidase complex (Spc1p, Spc2p, Spc3p, Sec11p) K12947 SPCS2; signal peptidase complex subunit 2 [EC:3.4.-.-] D PAS_chr4_0874 Subunit of signal peptidase complex (Spc1p, Spc2p, Spc3p, Sec11p) K12948 SPCS3; signal peptidase complex subunit 3 [EC:3.4.-.-] D PAS_chr1-4_0187 18kDa catalytic subunit of the Signal Peptidase Complex K13280 SEC11; signal peptidase I [EC:3.4.21.89] D PAS_chr1-3_0247 Catalytic subunit of the mitochondrial inner membrane peptidase complex K09647 IMP1; mitochondrial inner membrane protease subunit 1 [EC:3.4.21.-] D PAS_chr1-1_0274 Catalytic subunit of the mitochondrial inner membrane peptidase complex K09648 IMP2; mitochondrial inner membrane protease subunit 2 [EC:3.4.21.-] C 04141 Protein processing in endoplasmic reticulum [PATH:ppa04141] D PAS_chr1-4_0629 Subunit of the Ssh1 translocon complex K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr1-3_0202 Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p) K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr2-2_0210 Beta subunit of the Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p) K09481 SEC61B; protein transport protein SEC61 subunit beta D PAS_chr1-1_0023 hypothetical protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D PAS_chr3_1014 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K12275 SEC62; translocation protein SEC62 D PAS_chr4_0395 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K09540 SEC63; translocation protein SEC63 D PAS_chr3_0741 Alpha subunit of the oligosaccharyltransferase complex of the ER lumen K12666 RPN1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I) D PAS_chr1-3_0248 hypothetical protein K12667 RPN2; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II) D PAS_chr2-2_0346 Epsilon subunit of the oligosaccharyltransferase complex of the ER lumen K12668 DAD1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DAD1/OST2 D PAS_chr4_0610 Gamma subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-l K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6 D PAS_chr3_1142 Subunit of the oligosaccharyltransferase complex of the ER lumen K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6 D PAS_chr2-1_0423 Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex K12670 DDOST; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DDOST/WBP1 D PAS_chr1-4_0685 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18] D PAS_chr1-1_0215 Processing alpha glucosidase I, ER type II integral membrane N-glycoprotein K01228 MOGS; mannosyl-oligosaccharide glucosidase [EC:3.2.1.106] D PAS_chr1-1_0237 Nucleotide exchange factor for the endoplasmic reticulum (ER) lumenal Hsp70 chaperone Kar2p K14001 SIL1; nucleotide exchange factor SIL1 D PAS_chr1-3_0063 Molecular chaperone of the endoplasmic reticulum lumen K09486 HYOU1; hypoxia up-regulated 1 D PAS_chr2-1_0140 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding I K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10] D PAS_chr2-2_0015 One of several homologs of bacterial chaperone DnaJ, located in the ER lumen K09523 DNAJC3; DnaJ homolog subfamily C member 3 D PAS_chr1-3_0174 One of several homologs of bacterial chaperone DnaJ, located in the ER lumen K14002 SCJ1; DnaJ-related protein SCJ1 D PAS_chr2-1_0778 Glucosidase II catalytic subunit required for normal cell wall synthesis K05546 GANAB; mannosyl-oligosaccharide alpha-1,3-glucosidase [EC:3.2.1.207] D PAS_chr3_0179 Glucosidase II beta subunit K08288 PRKCSH; protein kinase C substrate 80K-H D PAS_chr2-1_0322 Calnexin K08054 CANX; calnexin D PAS_chr2-1_0753 Alpha-1,2-mannosidase involved in ER quality control K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209] D PAS_chr2-2_0178 hypothetical protein K10082 LMAN2; lectin, mannose-binding 2 D PAS_chr4_0432 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles K10080 LMAN1; lectin, mannose-binding 1 D PAS_chr4_0606 Guanine nucleotide exchange factor (GEF) K14003 PREB; prolactin regulatory element-binding protein D PAS_chr1-1_0180 GTPase; GTP-binding protein of the ARF family, component of COPII coat of vesicles K07953 SAR1; GTP-binding protein SAR1 [EC:3.6.5.-] D PAS_chr1-3_0057 Component of both the Nup84 nuclear pore sub-complex and of the COPII complex K14004 SEC13; protein transport protein SEC13 D PAS_chr1-4_0231 Essential phosphoprotein component (p150) of the COPII coat of secretory pathway vesicles K14005 SEC31; protein transport protein SEC31 D PAS_chr1-1_0048 GTPase-activating protein K14006 SEC23; protein transport protein SEC23 D PAS_chr4_0600 GTPase-activating protein K14006 SEC23; protein transport protein SEC23 D PAS_chr4_0484 Member of the Sec24p family K14007 SEC24; protein transport protein SEC24 D PAS_chr3_0614 Component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat K14007 SEC24; protein transport protein SEC24 D PAS_chr3_0929 Protein required for beta-1,6 glucan biosynthesis K11718 HUGT; UDP-glucose:glycoprotein glucosyltransferase [EC:2.4.1.-] D PAS_chr1-3_0114 Protein required for beta-1,6 glucan biosynthesis K11718 HUGT; UDP-glucose:glycoprotein glucosyltransferase [EC:2.4.1.-] D PAS_chr4_0844 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1] D PAS_chr1-1_0160 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr1-3_0125 Member of the protein disulfide isomerase (PDI) family K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr4_0991 hypothetical protein K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr2-1_0421 ER protein with chaperone and co-chaperone activity, involved in retention of resident ER proteins K13996 EPS1; protein disulfide-isomerase [EC:5.3.4.1] D PAS_chr1-1_0011 Thiol oxidase required for oxidative protein folding in the endoplasmic reticulum K10976 ERO1LB; ERO1-like protein beta [EC:1.8.4.-] D PAS_chr2-1_0038 hypothetical protein K14009 BCAP31; B-cell receptor-associated protein 31 D PAS_chr2-1_0546 hypothetical protein K13989 DERL2_3; Derlin-2/3 D PAS_chr1-3_0289 hypothetical protein K24348 UBXN1_4; UBX domain-containing protein 1/4 D PAS_chr2-1_0159 UBX (ubiquitin regulatory X) domain-containing protein that regulates Glc7p phosphatase activity and K14012 NSFL1C; UBX domain-containing protein 1 D PAS_chr1-1_0084 Protein involved in ER-associated protein degradation K14013 UBX2; UBX domain-containing protein 2 D PAS_FragD_0026 ATPase in ER, nuclear membrane and cytosol with homology to mammalian P97 K13525 VCP; transitional endoplasmic reticulum ATPase D PAS_chr1-1_0367 Protein that interacts with Cdc48p and Npl4p, involved in recognition of polyubiquitinated proteins K14016 UFD1; ubiquitin fusion degradation protein 1 D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr2-2_0066 Protein chaperone involved in regulation of the HSP90 and HSP70 functions K09503 DNAJA2; DnaJ homolog subfamily A member 2 D PAS_chr3_0480 Putative chaperone, homolog of E. coli DnaJ, closely related to Ydj1p K09503 DNAJA2; DnaJ homolog subfamily A member 2 D PAS_chr1-1_0086 Co-chaperone for Hsp40p, anchored in the ER membrane K09518 DNAJB12; DnaJ homolog subfamily B member 12 D PAS_chr1-4_0130 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D PAS_chr2-1_0042 Hsp70 (Ssa1p) nucleotide exchange factor, cytosolic homolog of Sil1p, which is the nucleotide exchan K09562 HSPBP1; hsp70-interacting protein D PAS_chr1-4_0091 hypothetical protein K14017 SNL1; HSP70 co-chaperone SNL1 D PAS_chr2-2_0057 Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p K13719 OTU1; ubiquitin thioesterase OTU1 [EC:3.1.2.-] D PAS_chr1-4_0618 WD repeat protein required for ubiquitin-mediated protein degradation K14018 PLAA; phospholipase A-2-activating protein D PAS_chr2-2_0445 Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (with Rad4p) K10839 RAD23; UV excision repair protein RAD23 D PAS_chr2-1_0892 hypothetical protein K04523 UBQLN; ubiquilin D PAS_chr1-3_0053 Conserved peptide N-glycanase required for deglycosylation of misfolded glycoproteins K01456 E3.5.1.52; peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase [EC:3.5.1.52] D PAS_chr1-1_0303 Ubiquitin chain assembly factor (E4) that cooperates with a ubiquitin-activating enzyme (E1) K10597 UBE4B; ubiquitin conjugation factor E4 B [EC:2.3.2.27] D PAS_chr3_0077 Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start K03237 EIF2S1; translation initiation factor 2 subunit 1 D PAS_chr3_1104 Serine-threonine kinase and endoribonuclease K08852 ERN1; serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-] D PAS_chr3_0538 Ubiquitin-protein ligase of the ER/nuclear envelope K10661 MARCH6; E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27] D PAS_chr1-1_0437 Ubiquitin-conjugating enzyme involved in ER-associated protein degradation K04554 UBE2J2; ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23] D PAS_chr3_0924 Ubiquitin conjugating enzyme, involved in the ER-associated protein degradation pathway K04555 UBE2G2; ubiquitin-conjugating enzyme E2 G2 [EC:2.3.2.23] D PAS_chr3_0249 hypothetical protein K14022 CUE1; coupling of ubiquitin conjugation to ER degradation protein 1 D PAS_chr3_1018 Resident protein of the ER membrane that plays a central role in ER-associated protein degradation K14023 HRD3; ERAD-associated E3 ubiquitin-protein ligase component HRD3 D PAS_chr4_0156 Ubiquitin-protein ligase K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27] D PAS_chr4_0444 Ubiquitin-protein ligase K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27] D PAS_chr3_0710 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23] D PAS_chr4_0436 RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF) K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] D PAS_chr1-1_0312 Cullin, structural protein of SCF complexes, involved in ubiquination K03347 CUL1; cullin 1 D PAS_chr3_1258 hypothetical protein K03094 SKP1; S-phase kinase-associated protein 1 C 04130 SNARE interactions in vesicular transport [PATH:ppa04130] D PAS_chr1-4_0294 Plasma membrane t-SNARE involved in fusion of secretory vesicles at the plasma membrane K08486 STX1B_2_3; syntaxin 1B/2/3 D PAS_chr2-2_0350 Target membrane receptor (t-SNARE) K21155 VAM3; syntaxin VAM3 D PAS_chr3_1238 hypothetical protein K08489 STX16; syntaxin 16 D PAS_chr1-4_0024 cis-Golgi t-SNARE syntaxin required for vesicular transport between the ER and the Golgi complex K08490 STX5; syntaxin 5 D PAS_chr3_0989 t-SNARE required for ER membrane fusion and vesicular traffic K08492 STX18; syntaxin 18 D PAS_chr3_1085 Protein involved in cis-Golgi membrane traffic K08493 VTI1; vesicle transport through interaction with t-SNAREs 1 D PAS_chr2-1_0161 v-SNARE protein involved in Golgi transport, homolog of the mammalian protein GOS-28/GS28 K08495 GOSR1; golgi SNAP receptor complex member 1 D PAS_chr2-2_0453 hypothetical protein K08496 GOSR2; golgi SNAP receptor complex member 2 D PAS_chr1-4_0462 Membrane glycoprotein V-SNARE K08497 SEC20; protein transport protein SEC20 D PAS_chr3_0048 Essential t-SNARE that forms a complex with Tlg2p and Vti1p and mediates fusion of endosome-derived K08499 TLG1; member of the syntaxin family of t-SNAREs D PAS_chr1-1_0246 hypothetical protein K08501 STX8; syntaxin 8 D PAS_chr1-4_0500 hypothetical protein K08502 VAM7; regulator of vacuolar morphogenesis D PAS_chr1-3_0161 Type II membrane protein required for vesicular transport K08504 BET1; blocked early in transport 1 D PAS_chr1-1_0481 hypothetical protein K08507 USE1; unconventional SNARE in the endoplasmic reticulum protein 1 D PAS_FragB_0011 Synaptobrevin homolog 2 K08513 VAMP4; vesicle-associated membrane protein 4 D PAS_chr2-1_0099 hypothetical protein K08515 VAMP7; vesicle-associated membrane protein 7 D PAS_FragB_0006 Synaptobrevin homolog YKT6 K08516 YKT6; synaptobrevin homolog YKT6 D PAS_chr3_0274 R-SNARE protein K08517 SEC22; vesicle transport protein SEC22 C 04120 Ubiquitin mediated proteolysis [PATH:ppa04120] D PAS_chr4_0762 Ubiquitin K08770 UBC; ubiquitin C D PAS_chr2-1_0486 ubiquitin-60S ribosomal protein L40 fusion protein K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PAS_chr3_0722 ubiquitin-40S ribosomal protein S31 fusion protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PAS_chr3_0856 Ubiquitin activating enzyme (E1), involved in ubiquitin-mediated protein degradation K03178 UBE1; ubiquitin-activating enzyme E1 [EC:6.2.1.45] D PAS_chr2-2_0425 Nuclear protein that acts as a heterodimer with Uba2p to activate Smt3p (SUMO) K10684 UBLE1A; ubiquitin-like 1-activating enzyme E1 A [EC:6.2.1.45] D PAS_chr2-1_0119 Nuclear protein that acts as a heterodimer with Aos1p to activate Smt3p (SUMO) before its conjugatio K10685 UBLE1B; ubiquitin-like 1-activating enzyme E1 B [EC:6.2.1.45] D PAS_chr2-1_0152 Protein that acts together with Ula1p to activate Rub1p before its conjugation to proteins (neddylat K10686 UBA3; NEDD8-activating enzyme E1 [EC:6.2.1.64] D PAS_chr3_0359 Ubiquitin-conjugating enzyme (E2) K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D PAS_chr3_0709 Ubiquitin-conjugating enzyme most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C K06688 UBE2C; ubiquitin-conjugating enzyme E2 C [EC:2.3.2.23] D PAS_chr3_0710 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23] D PAS_chr3_0924 Ubiquitin conjugating enzyme, involved in the ER-associated protein degradation pathway K04555 UBE2G2; ubiquitin-conjugating enzyme E2 G2 [EC:2.3.2.23] D PAS_chr3_0779 Ubiquitin-conjugating enzyme that negatively regulates gluconeogenesis K10576 UBE2H; ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23] D PAS_chr2-1_0714 SUMO-conjugating enzyme involved in the Smt3p conjugation pathway K10577 UBE2I; ubiquitin-conjugating enzyme E2 I D PAS_chr1-1_0437 Ubiquitin-conjugating enzyme involved in ER-associated protein degradation K04554 UBE2J2; ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23] D PAS_chr4_0429 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein K04649 UBE2K; ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:2.3.2.23] D PAS_chr1-4_0670 hypothetical protein K10579 UBE2M; ubiquitin-conjugating enzyme E2 M [EC:2.3.2.34] D PAS_chr2-1_0058 Ubiquitin-conjugating enzyme involved in the error-free DNA postreplication repair pathway K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] D PAS_chr1-3_0048 Ubiquitin-conjugating enzyme (E2) and catalytic subunit of SCF ubiquitin-protein ligase complex K02207 UBE2R; ubiquitin-conjugating enzyme E2 R [EC:2.3.2.23] D PAS_FragB_0055 ubiquitin-conjugating enzyme K10688 UBE2W; ubiquitin-conjugating enzyme E2 W [EC:2.3.2.23 2.3.2.25] D PAS_chr2-1_0164 Ubiquitin-conjugating enzyme (E4), elongates polyubiquitin chains on substrate proteins K10589 UBE3C; ubiquitin-protein ligase E3 C [EC:2.3.2.26] D PAS_chr1-1_0363 Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p K10590 TRIP12; E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] D PAS_chr2-1_0354 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26] D PAS_chr3_0044 E3 ubiquitin ligase of the hect-domain class K10592 HUWE1; E3 ubiquitin-protein ligase HUWE1 [EC:2.3.2.26] D PAS_chr1-1_0303 Ubiquitin chain assembly factor (E4) that cooperates with a ubiquitin-activating enzyme (E1) K10597 UBE4B; ubiquitin conjugation factor E4 B [EC:2.3.2.27] D PAS_chr4_0764 Splicing factor associated with the spliceosome K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D PAS_chr3_0129 SUMO/Smt3 ligase that promotes the attachment of sumo (Smt3p K04706 PIAS1; E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-] D PAS_chr4_0156 Ubiquitin-protein ligase K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27] D PAS_chr4_0444 Ubiquitin-protein ligase K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27] D PAS_chr4_0436 RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF) K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] D PAS_chr1-1_0312 Cullin, structural protein of SCF complexes, involved in ubiquination K03347 CUL1; cullin 1 D PAS_chr3_1258 hypothetical protein K03094 SKP1; S-phase kinase-associated protein 1 D PAS_chr2-1_0666 F-box protein required for G1/S and G2/M transition K03361 CDC4; F-box and WD-40 domain protein CDC4 D PAS_chr3_0594 F-box protein containing five copies of the WD40 motif, controls cell cycle function K10259 MET30; F-box and WD-40 domain protein MET30 D PAS_chr4_0769 F-box protein component of the SCF ubiquitin-ligase complex K03360 GRR1; F-box and leucine-rich repeat protein GRR1 D PAS_chr2-1_0369 Ubiquitin-protein ligase, member of the cullin family with similarity to Cdc53p and human CUL3 K03869 CUL3; cullin 3 D PAS_chr1-4_0609 Cullin, structural protein of SCF complexes K10609 CUL4; cullin 4 D PAS_chr2-2_0308 Protein involved in DNA repair, related to the human CSA protein K10570 ERCC8; DNA excision repair protein ERCC-8 D PAS_chr3_0293 Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03358 APC11; anaphase-promoting complex subunit 11 D PAS_chr2-1_0604 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03349 APC2; anaphase-promoting complex subunit 2 D PAS_chr2-2_0495 hypothetical protein K03364 CDH1; cell division cycle 20-like protein 1, cofactor of APC complex D PAS_chr1-4_0020 Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03348 APC1; anaphase-promoting complex subunit 1 D PAS_chr1-3_0148 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03350 APC3; anaphase-promoting complex subunit 3 D PAS_chr3_0477 hypothetical protein K03351 APC4; anaphase-promoting complex subunit 4 D PAS_chr1-4_0197 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03353 APC6; anaphase-promoting complex subunit 6 D PAS_chr3_1078 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03355 APC8; anaphase-promoting complex subunit 8 D PAS_chr3_1218 hypothetical protein K03357 APC10; anaphase-promoting complex subunit 10 C 04122 Sulfur relay system [PATH:ppa04122] D PAS_chr3_0037 Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAS_chr2-1_0698 Putative protein of unknown function with similarity to human thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAS_chr2-1_0393 Ubiquitin-like protein with weak sequence similarity to ubiquitin K12161 URM1; ubiquitin related modifier 1 D PAS_chr2-1_0563 Protein that activates Urm1p before its conjugation to proteins (urmylation) K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11] D PAS_chr3_0775 Protein required for thiolation of the uridine at the wobble position of Gln, Lys, and Glu tRNAs K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-] D PAS_chr2-2_0373 Protein with a role in urmylation and in invasive and pseudohyphal growth K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2 D PAS_chr1-4_0659 hypothetical protein K14171 AHP1; alkyl hydroperoxide reductase 1 [EC:1.11.1.24] D PAS_chr1-4_0547 peroxiredoxin K14171 AHP1; alkyl hydroperoxide reductase 1 [EC:1.11.1.24] D PAS_chr1-3_0292 hypothetical protein K21232 MOCS2A; molybdopterin synthase sulfur carrier subunit D PAS_chr1-1_0456 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PAS_chr3_0687 hypothetical protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] C 03050 Proteasome [PATH:ppa03050] D PAS_chr3_0223 non-ATPase regulatory subunit of the 26S proteasome lid K03033 PSMD3; 26S proteasome regulatory subunit N3 D PAS_chr2-1_0392 Protein with similarity to the p27 subunit of mammalian proteasome modulator K06693 PSMD9; 26S proteasome regulatory subunit N4 D PAS_chr1-1_0299 Essential, non-ATPase regulatory subunit of the 26S proteasome lid K03035 PSMD12; 26S proteasome regulatory subunit N5 D PAS_chr3_1069 Essential, non-ATPase regulatory subunit of the 26S proteasome lid K03036 PSMD11; 26S proteasome regulatory subunit N6 D PAS_chr3_0457 Essential, non-ATPase regulatory subunit of the 26S proteasome K03037 PSMD6; 26S proteasome regulatory subunit N7 D PAS_chr1-3_0195 Essential, non-ATPase regulatory subunit of the 26S proteasome K03038 PSMD7; 26S proteasome regulatory subunit N8 D PAS_chr3_0513 hypothetical protein K03038 PSMD7; 26S proteasome regulatory subunit N8 D PAS_chr1-1_0079 Non-ATPase regulatory subunit of the 26S proteasome K03039 PSMD13; 26S proteasome regulatory subunit N9 D PAS_chr2-2_0341 Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid K03030 PSMD14; 26S proteasome regulatory subunit N11 D PAS_chr4_0299 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 D PAS_chr3_1083 Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome K03029 PSMD4; 26S proteasome regulatory subunit N10 D PAS_chr3_0898 Non-ATPase base subunit of the 19S regulatory particle of the 26S proteasome K03028 PSMD2; 26S proteasome regulatory subunit N1 D PAS_chr2-1_0656 Subunit of the 26S proteasome, substrate of the N-acetyltransferase Nat1p K03032 PSMD1; 26S proteasome regulatory subunit N2 D PAS_chr2-1_0597 hypothetical protein K06691 RPN13; 26S proteasome regulatory subunit N13 D PAS_chr4_0736 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03061 PSMC2; 26S proteasome regulatory subunit T1 D PAS_chr4_0731 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03062 PSMC1; 26S proteasome regulatory subunit T2 D PAS_chr1-1_0054 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation K03066 PSMC5; 26S proteasome regulatory subunit T6 D PAS_chr4_0387 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03064 PSMC6; 26S proteasome regulatory subunit T4 D PAS_chr4_0300 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03065 PSMC3; 26S proteasome regulatory subunit T5 D PAS_chr3_0881 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03063 PSMC4; 26S proteasome regulatory subunit T3 D PAS_chr3_0776 Proteosome activator subunit K06699 PSME4; proteasome activator subunit 4 D PAS_chr4_0066 Alpha 1 subunit of the 20S core complex of the 26S proteasome K02730 PSMA6; 20S proteasome subunit alpha 1 [EC:3.4.25.1] D PAS_chr2-1_0188 Alpha 2 subunit of the 20S proteasome K02726 PSMA2; 20S proteasome subunit alpha 2 [EC:3.4.25.1] D PAS_chr4_0506 Alpha 3 subunit of the 20S proteasome, the only nonessential 20S subunit K02728 PSMA4; 20S proteasome subunit alpha 3 [EC:3.4.25.1] D PAS_chr3_0450 Alpha 4 subunit of the 20S proteasome K02731 PSMA7; 20S proteasome subunit alpha 4 [EC:3.4.25.1] D PAS_chr3_1129 Alpha 5 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism K02729 PSMA5; 20S proteasome subunit alpha 5 [EC:3.4.25.1] D PAS_chr2-1_0291 Alpha 6 subunit of the 20S proteasome K02725 PSMA1; 20S proteasome subunit alpha 6 [EC:3.4.25.1] D PAS_chr3_0699 Alpha 7 subunit of the 20S proteasome K02727 PSMA3; 20S proteasome subunit alpha 7 [EC:3.4.25.1] D PAS_chr3_0748 Beta 1 subunit of the 20S proteasome, responsible for cleavage after acidic residues in peptides K02738 PSMB6; 20S proteasome subunit beta 1 [EC:3.4.25.1] D PAS_chr2-1_0122 Endopeptidase with trypsin-like activity that cleaves after basic residues K02739 PSMB7; 20S proteasome subunit beta 2 [EC:3.4.25.1] D PAS_chr2-2_0073 Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism K02735 PSMB3; 20S proteasome subunit beta 3 [EC:3.4.25.1] D PAS_chr1-4_0117 Beta 4 subunit of the 20S proteasome K02734 PSMB2; 20S proteasome subunit beta 4 [EC:3.4.25.1] D PAS_chr4_0668 Beta 5 subunit of the 20S proteasome, responsible for the chymotryptic activity of the proteasome K02737 PSMB5; 20S proteasome subunit beta 5 [EC:3.4.25.1] D PAS_chr4_0776 Beta 6 subunit of the 20S proteasome K02732 PSMB1; 20S proteasome subunit beta 6 [EC:3.4.25.1] D PAS_chr1-4_0567 Beta 7 subunit of the 20S proteasome K02736 PSMB4; 20S proteasome subunit beta 7 [EC:3.4.25.1] D PAS_chr2-1_0431 Short-lived chaperone required for correct maturation of the 20S proteasome K11599 POMP; proteasome maturation protein C 03018 RNA degradation [PATH:ppa03018] D PAS_chr3_0273 Non-essential hydrolase involved in mRNA decapping K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] D PAS_chr4_0563 Subunit of the exosome, which is an essential complex present in both nucleus and cytoplasm K07573 CSL4; exosome complex component CSL4 D PAS_chr3_0581 3'-5' exoribonuclease involved in rRNA processing K03679 RRP4; exosome complex component RRP4 D PAS_chr1-4_0455 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40 D PAS_chr3_0603 Protein involved in rRNA processing K12586 RRP43; exosome complex component RRP43 D PAS_chr1-4_0092 exosome component K12587 MTR3; exosome complex component MTR3 D PAS_chr3_1067 Protein involved in rRNA processing K12589 RRP42; exosome complex component RRP42 D PAS_chr3_0385 3'-to-5' phosphorolytic exoribonuclease that is A subunit of the exosome K11600 RRP41; exosome complex component RRP41 D PAS_chr3_0753 Protein involved in rRNA processing K12590 RRP46; exosome complex component RRP46 D PAS_chr3_0956 Protein involved in rRNA processing K03678 RRP45; exosome complex component RRP45 D PAS_chr1-4_0108 Exonuclease component of the nuclear exosome K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] D PAS_chr3_1072 hypothetical protein K12592 C1D; exosome complex protein LRP1 D PAS_chr2-1_0266 hypothetical protein K12594 MPP6; M-phase phosphoprotein 6, fungi type D PAS_chr4_0229 Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p) K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] D PAS_chr2-2_0239 RING finger protein that interacts with the arginine methyltransferase Hmt1p K12597 AIR1_2; protein AIR1/2 D PAS_chr2-1_0709 Putative RNA helicase K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] D PAS_chr2-2_0436 Involved in exosome mediated 3' to 5' mRNA degradation & translation inhibition of non-poly(A) mRNAs K12600 SKI3; superkiller protein 3 D PAS_chr1-4_0501 Protein involved in exosome mediated 3' to 5' mRNA degradation K12601 SKI8; superkiller protein 8 D PAS_chr4_0490 Component of the CCR4-NOT transcriptional complex K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] D PAS_chr4_0431 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels K12604 CNOT1; CCR4-NOT transcription complex subunit 1 D PAS_chr2-1_0494 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels K12605 CNOT2; CCR4-NOT transcription complex subunit 2 D PAS_FragD_0003 Subunit of the CCR4-NOT complex K12580 CNOT3; CCR4-NOT transcription complex subunit 3 D PAS_chr1-4_0152 Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcrip K12580 CNOT3; CCR4-NOT transcription complex subunit 3 D PAS_chr1-4_0594 General negative regulator of transcription subunit 4 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] D PAS_chr4_0224 Evolutionarily conserved subunit of the CCR4-NOT complex involved in controlling mRNA initiation K12606 RCD1; CCR4-NOT transcription complex subunit 9 D PAS_chr1-4_0366 Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex K12608 CAF16; CCR4-NOT complex subunit CAF16 D PAS_chr4_0633 hypothetical protein K12609 CAF120; CCR4-NOT transcriptional complex subunit CAF120 D PAS_chr3_0075 hypothetical protein K12609 CAF120; CCR4-NOT transcriptional complex subunit CAF120 D PAS_chr2-1_0097 Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between th K13126 PABPC; polyadenylate-binding protein D PAS_chr1-4_0283 Poly(A) binding protein, part of the 3'-end RNA-processing complex K13126 PABPC; polyadenylate-binding protein D PAS_chr1-1_0143 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease comple K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] D PAS_chr2-1_0541 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D PAS_chr1-3_0157 Subunit of the Dcp1p-Dcp2p decapping enzyme complex K12612 DCP1; mRNA-decapping enzyme subunit 1 D PAS_chr4_0194 Catalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] D PAS_chr1-4_0007 Cytoplasmic DExD/H-box helicase K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] D PAS_chr1-4_0100 hypothetical protein K12615 EDC3; enhancer of mRNA-decapping protein 3 D PAS_chr2-2_0378 Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D PAS_chr3_0432 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D PAS_chr3_0846 Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D PAS_chr3_0442 Lsm (Like Sm) protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 D PAS_chr4_0448 Lsm (Like Sm) protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 D PAS_chr1-1_0014 Lsm (Like Sm) protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 D PAS_chr1-3_0142 Lsm (Like Sm) protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 D PAS_chr1-3_0256 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 D PAS_chr3_0060 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 D PAS_chr1-1_0487 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 D PAS_chr4_0281 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D PAS_chr3_0082 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAS_chr2-1_0402 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-4_0047 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr3_0365 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr3_0402 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr4_0158 Tetradecameric mitochondrial chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:ppa03030] D PAS_chr1-1_0366 Ribonuclease H1 K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PAS_chr1-1_0113 Subunit of heterotrimeric Replication Protein A (RPA) K07466 RFA1; replication factor A1 D PAS_chr3_0233 Proliferating cell nuclear antigen (PCNA) K04802 PCNA; proliferating cell nuclear antigen D PAS_chr4_0279 Essential tripartite DNA replication factor with single-stranded DNA-dependent ATPase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] D PAS_chr1-4_0633 5' to 3' exonuclease, 5' flap endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PAS_chr3_1112 DNA ligase found in the nucleus and mitochondria K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PAS_chr2-2_0349 Catalytic subunit of the DNA polymerase I alpha-primase complex K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7] D PAS_chr2-1_0500 B subunit of DNA polymerase alpha-primase complex K02321 POLA2; DNA polymerase alpha subunit B D PAS_chr4_0323 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair K02684 PRI1; DNA primase small subunit [EC:2.7.7.102] D PAS_chr2-1_0512 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair K02685 PRI2; DNA primase large subunit D PAS_chr2-1_0163 Catalytic subunit of DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] D PAS_chr2-1_0395 DNA polymerase III (delta) subunit, essential for cell viability K02328 POLD2; DNA polymerase delta subunit 2 D PAS_chr1-4_0146 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 D PAS_chr1-3_0083 Catalytic subunit of DNA polymerase (II) epsilon K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] D PAS_chr3_0765 Second largest subunit of DNA polymerase II (DNA polymerase epsilon) K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] D PAS_chr2-1_0100 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] D PAS_chr2-1_0620 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] D PAS_chr4_0223 Protein involved in DNA replication K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3] D PAS_chr2-1_0149 Protein involved in DNA replication K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3] D PAS_chr1-4_0142 Essential helicase component of heterohexameric MCM2-7 complexes K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3] D PAS_chr2-2_0339 Component of the hexameric MCM complex K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3] D PAS_chr1-4_0360 Protein involved in DNA replication K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3] D PAS_chr4_0891 DNA replication licensing factor K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3] D PAS_chr4_0034 Subunit of heterotrimeric Replication Protein A (RPA) K10739 RFA2; replication factor A2 D PAS_chr3_0961 hypothetical protein K10740 RPA3; replication factor A3 D PAS_chr1-4_0269 Replication factor C subunit K10754 RFC1; replication factor C subunit 1 D PAS_chr1-3_0030 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0619 Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0069 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase T K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0556 Replication factor C K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-1_0049 Ribonuclease H2 catalytic subunit, removes RNA primers during Okazaki fragment synthesis K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4] D PAS_chr1-1_0499 hypothetical protein K10745 RNASEH2C; ribonuclease H2 subunit C C 03410 Base excision repair [PATH:ppa03410] D PAS_chr2-2_0280 Mitochondrial glycosylase/lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D PAS_chr4_0492 DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in base excision repair K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PAS_chr3_1105 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PAS_chr3_0810 Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] D PAS_chr1-1_0480 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] D PAS_chr3_0703 DNA polymerase gamma K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7] D PAS_chr2-1_0163 Catalytic subunit of DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] D PAS_chr2-1_0395 DNA polymerase III (delta) subunit, essential for cell viability K02328 POLD2; DNA polymerase delta subunit 2 D PAS_chr1-4_0146 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 D PAS_chr1-3_0083 Catalytic subunit of DNA polymerase (II) epsilon K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] D PAS_chr3_0765 Second largest subunit of DNA polymerase II (DNA polymerase epsilon) K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] D PAS_chr2-1_0100 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] D PAS_chr2-1_0620 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] D PAS_chr3_0233 Proliferating cell nuclear antigen (PCNA) K04802 PCNA; proliferating cell nuclear antigen D PAS_chr1-4_0269 Replication factor C subunit K10754 RFC1; replication factor C subunit 1 D PAS_chr1-3_0030 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0619 Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0069 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase T K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0556 Replication factor C K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0633 5' to 3' exonuclease, 5' flap endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PAS_chr3_1112 DNA ligase found in the nucleus and mitochondria K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PAS_chr1-3_0257 3-methyl-adenine DNA glycosylase involved in protecting DNA against alkylating agents K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C 03420 Nucleotide excision repair [PATH:ppa03420] D PAS_chr3_0219 DNA helicase and DNA-dependent ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PAS_chr4_0436 RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF) K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] D PAS_chr1-4_0609 Cullin, structural protein of SCF complexes K10609 CUL4; cullin 4 D PAS_chr1-1_0025 DNA repair protein K10838 XPC; xeroderma pigmentosum group C-complementing protein D PAS_chr2-2_0445 Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (with Rad4p) K10839 RAD23; UV excision repair protein RAD23 D PAS_chr2-2_0308 Protein involved in DNA repair, related to the human CSA protein K10570 ERCC8; DNA excision repair protein ERCC-8 D PAS_chr2-1_0629 Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion K10841 ERCC6; DNA excision repair protein ERCC-6 D PAS_chr3_0568 RNA polymerase II largest subunit B220 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] D PAS_chr2-1_0125 RNA polymerase II second largest subunit B150, part of central core K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] D PAS_chr4_0344 RNA polymerase II third largest subunit B44, part of central core K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 D PAS_chr2-2_0104 RNA polymerase II subunit B32 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 D PAS_chr3_0157 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 D PAS_chr2-2_0434 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 D PAS_chr4_0906 RNA polymerase II subunit K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D PAS_chr2-2_0309 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 D PAS_chr1-4_0359 RNA polymerase II subunit B12.6 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 D PAS_chr2-1_0223 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 D PAS_chr1-1_0166 RNA polymerase subunit, found in RNA polymerase complexes I, II, and III K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 D PAS_chr3_0244 RNA polymerase II subunit B12.5 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 D PAS_chr2-2_0041 Serine/threonine protein kinase, subunit of the transcription factor TFIIH K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] D PAS_chr4_0204 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D PAS_chr3_0575 Cyclin associated with protein kinase Kin28p K06634 CCNH; cyclin H D PAS_chr1-4_0204 Component of the holoenzyme form of RNA polymerase transcription factor TFIIH K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D PAS_chr2-1_0797 5' to 3' DNA helicase, involved in nucleotide excision repair and transcription K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PAS_chr4_0061 Component of the RNA polymerase II general transcription and DNA repair factor TFIIH K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit D PAS_chr4_0745 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 D PAS_chr1-4_0245 Component of the core form of RNA polymerase transcription factor TFIIH K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 D PAS_chr2-1_0043 Subunit of TFIIH complex, involved in transcription initiation, similar to 34 kDa subunit of human T K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 D PAS_chr4_0238 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 D PAS_chr4_0555 Single-stranded DNA endonuclease, cleaves single-stranded DNA during nucleotide excision repair K10846 ERCC5; DNA excision repair protein ERCC-5 D PAS_chr2-1_0702 Protein that recognizes and binds damaged DNA during nucleotide excision repair K10847 XPA; DNA-repair protein complementing XP-A cells D PAS_chr1-1_0113 Subunit of heterotrimeric Replication Protein A (RPA) K07466 RFA1; replication factor A1 D PAS_chr4_0034 Subunit of heterotrimeric Replication Protein A (RPA) K10739 RFA2; replication factor A2 D PAS_chr3_0961 hypothetical protein K10740 RPA3; replication factor A3 D PAS_chr2-2_0184 Single-stranded DNA endonuclease (with Rad10p) K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D PAS_chr2-1_0195 Single-stranded DNA endonuclease (with Rad1p), cleaves single-stranded DNA during nucleotide excisio K10849 ERCC1; DNA excision repair protein ERCC-1 D PAS_chr2-1_0163 Catalytic subunit of DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] D PAS_chr2-1_0395 DNA polymerase III (delta) subunit, essential for cell viability K02328 POLD2; DNA polymerase delta subunit 2 D PAS_chr1-4_0146 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 D PAS_chr1-3_0083 Catalytic subunit of DNA polymerase (II) epsilon K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] D PAS_chr3_0765 Second largest subunit of DNA polymerase II (DNA polymerase epsilon) K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] D PAS_chr2-1_0100 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] D PAS_chr2-1_0620 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] D PAS_chr3_0233 Proliferating cell nuclear antigen (PCNA) K04802 PCNA; proliferating cell nuclear antigen D PAS_chr1-4_0269 Replication factor C subunit K10754 RFC1; replication factor C subunit 1 D PAS_chr1-3_0030 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0619 Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0069 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase T K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0556 Replication factor C K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr3_1112 DNA ligase found in the nucleus and mitochondria K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:ppa03430] D PAS_chr3_0219 DNA helicase and DNA-dependent ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PAS_chr4_0124 ATP-binding protein required for mismatch repair in mitosis and meiosis K10858 PMS2; DNA mismatch repair protein PMS2 D PAS_chr2-1_0165 Protein required for mismatch repair in mitosis and meiosis as well as crossing over during meiosis K08734 MLH1; DNA mismatch repair protein MLH1 D PAS_chr2-1_0094 Protein required for mismatch repair in mitosis and meiosis, forms a complex with Msh2p to repair bo K08737 MSH6; DNA mismatch repair protein MSH6 D PAS_chr1-4_0634 Protein that forms heterodimers with Msh3p and Msh6p K08735 MSH2; DNA mismatch repair protein MSH2 D PAS_chr1-4_0376 Mismatch repair protein K08736 MSH3; DNA mismatch repair protein MSH3 D PAS_chr1-4_0269 Replication factor C subunit K10754 RFC1; replication factor C subunit 1 D PAS_chr1-3_0030 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0619 Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0069 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase T K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0556 Replication factor C K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr3_0233 Proliferating cell nuclear antigen (PCNA) K04802 PCNA; proliferating cell nuclear antigen D PAS_chr1-1_0113 Subunit of heterotrimeric Replication Protein A (RPA) K07466 RFA1; replication factor A1 D PAS_chr4_0034 Subunit of heterotrimeric Replication Protein A (RPA) K10739 RFA2; replication factor A2 D PAS_chr3_0961 hypothetical protein K10740 RPA3; replication factor A3 D PAS_chr2-1_0163 Catalytic subunit of DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] D PAS_chr2-1_0395 DNA polymerase III (delta) subunit, essential for cell viability K02328 POLD2; DNA polymerase delta subunit 2 D PAS_chr1-4_0146 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 D PAS_chr3_1112 DNA ligase found in the nucleus and mitochondria K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination [PATH:ppa03440] D PAS_chr1-4_0513 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D PAS_chr3_0851 Subunit of a complex with Rad50p and Xrs2p (MRX complex) K10865 MRE11; double-strand break repair protein MRE11 D PAS_chr1-3_0143 Protein kinase primarily involved in telomere length regulation K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D PAS_chr4_0299 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 D PAS_chr1-3_0025 strand exchange protein K10958 RAD57; DNA repair protein RAD57 D PAS_chr1-1_0113 Subunit of heterotrimeric Replication Protein A (RPA) K07466 RFA1; replication factor A1 D PAS_chr4_0034 Subunit of heterotrimeric Replication Protein A (RPA) K10739 RFA2; replication factor A2 D PAS_chr3_0961 hypothetical protein K10740 RPA3; replication factor A3 D PAS_chr3_0904 Strand exchange protein, forms a helical filament with DNA that searches for homology K04482 RAD51; DNA repair protein RAD51 D PAS_chr2-1_0153 Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA K10873 RAD52; DNA repair and recombination protein RAD52 D PAS_chr4_0087 Protein involved in the repair of double-strand breaks in DNA during vegetative growth K10959 RAD59; DNA repair protein RAD59 D PAS_chr3_0224 DNA-dependent ATPase K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] D PAS_FragB_0039 DNA-dependent ATPase K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-] D PAS_chr2-1_0163 Catalytic subunit of DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] D PAS_chr2-1_0395 DNA polymerase III (delta) subunit, essential for cell viability K02328 POLD2; DNA polymerase delta subunit 2 D PAS_chr1-4_0146 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 D PAS_FragB_0056 ATP-dependent helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4] D PAS_chr1-1_0242 DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D PAS_chr2-1_0135 Helix-hairpin-helix protein, involved in DNA repair and replication fork stability K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] D PAS_chr2-1_0041 hypothetical protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-] C 03450 Non-homologous end-joining [PATH:ppa03450] D PAS_chr3_0329 Subunit of the telomeric Ku complex (Yku70p-Yku80p) K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 D PAS_chr4_0751 Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in telomere length maintenance K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 D PAS_chr3_0732 DNA ligase required for nonhomologous end-joining (NHEJ) K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] D PAS_chr1-4_0513 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D PAS_chr3_0851 Subunit of a complex with Rad50p and Xrs2p (MRX complex) K10865 MRE11; double-strand break repair protein MRE11 D PAS_chr3_0797 DNA polymerase IV K10981 POL4; DNA polymerase IV [EC:2.7.7.7] D PAS_chr1-4_0633 5' to 3' exonuclease, 5' flap endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling [PATH:ppa03082] D PAS_chr2-2_0383 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] D PAS_chr4_0128 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] D PAS_chr2-1_0100 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] D PAS_chr3_1191 hypothetical protein K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr2-1_0271 Subunit of the Hat1p-Hat2p histone acetyltransferase complex K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr2-1_0205 Subunit of the Hat1p-Hat2p histone acetyltransferase complex K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr1-4_0125 Histone deacetylase K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] D PAS_chr3_1159 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 D PAS_chr1-1_0087 ATPase that forms a large complex, containing actin and several actin-related proteins K11665 INO80; chromatin-remodeling ATPase INO80 [EC:5.6.2.-] D PAS_chr4_0370 Protein that associates with the INO80 chromatin remodeling complex under low-salt conditions K11667 INO80C; INO80 complex subunit C D PAS_chr4_0475 Essential protein involved in transcription regulation K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4] D PAS_chr2-1_0688 Essential protein involved in transcription regulation K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3] D PAS_chr2-2_0068 Nuclear actin-related protein involved in chromatin remodeling K11672 ACTR5; actin-related protein 5 D PAS_chr3_0047 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en K11673 ACTR8; actin-related protein 8 D PAS_FragB_0005 Ino eighty subunit 1 K11675 IES1; Ino eighty subunit 1 D PAS_chr2-1_0036 hypothetical protein K11676 IES2; Ino eighty subunit 2 D PAS_chr1-4_0265 hypothetical protein K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit D PAS_chr1-1_0442 Protein related to mammalian high mobility group proteins K11680 NHP10; non-histone protein 10 D PAS_chr1-4_0169 actin K11400 ARP4; actin-related protein 4 D PAS_chr4_0143 Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex K11661 SRCAP; helicase SRCAP/SWR1 [EC:5.6.2.-] D PAS_chr2-1_0370 Component of the Swr1p complex that incorporates Htz1p into chromatin K11324 DMAP1; DNA methyltransferase 1-associated protein 1 D PAS_chr4_0376 Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 complex K11341 YEATS4; YEATS domain-containing protein 4 D PAS_chr3_1158 hypothetical protein K11664 VPS72; vacuolar protein sorting-associated protein 72 D PAS_chr4_0157 Histone variant H2AZ, exchanged for histone H2A in nucleosomes by the SWR1 complex K11251 H2A; histone H2A D PAS_chr2-1_0429 One of two nearly identical (see also HTA1) histone H2A subtypes K11251 H2A; histone H2A D PAS_chr1-1_0020 Actin-like protein K11662 ACTR6; actin-related protein 6 D PAS_chr3_0057 hypothetical protein K11663 ZNHIT1; zinc finger HIT domain-containing protein 1 D PAS_chr1-4_0571 Transcription-associated protein K08874 TRRAP; transformation/transcription domain-associated protein D PAS_chr2-1_0356 Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex K11339 MORF4L1; mortality factor 4-like protein 1 D PAS_chr4_0100 Component of NuA4, which is an essential histone H4/H2A acetyltransferase complex K11322 EPC; enhancer of polycomb-like protein D PAS_chr1-4_0084 Chromatin modification-related protein EAF6 K11344 MEAF6; chromatin modification-related protein EAF6 D PAS_chr4_0084 Histone acetyltransferase catalytic subunit of the native multisubunit complex (NuA4) K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48] C 03083 Polycomb repressive complex [PATH:ppa03083] D PAS_chr3_1191 hypothetical protein K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr2-1_0271 Subunit of the Hat1p-Hat2p histone acetyltransferase complex K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr2-1_0205 Subunit of the Hat1p-Hat2p histone acetyltransferase complex K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr3_0710 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23] D PAS_chr1-1_0295 JmjC domain family histone demethylase specific for H3-K36 K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27] D PAS_chr3_1258 hypothetical protein K03094 SKP1; S-phase kinase-associated protein 1 D PAS_chr4_0022 Ubiquitin-specific protease that may play a role in ubiquitin precursor processing K11838 USP7; ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] D PAS_chr4_0402 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_chr2-2_0247 Beta' regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_FragB_0054 WD repeat-containing protein K11805 DCAF7; DDB1- and CUL4-associated factor 7 D PAS_chr4_0258 Essential component of the Rix1 complex (with Rix1p and Ipi3p) K14827 IPI1; pre-rRNA-processing protein IPI1 D PAS_chr2-1_0430 Essential subunit of the COMPASS (Set1C) complex K14963 WDR5; COMPASS component SWD3 D PAS_chr1-4_0125 Histone deacetylase K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ppa03250] D PAS_chr2-2_0381 Peptidylprolyl-cis/trans-isomerase (PPIase) K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] D PAS_chr3_1159 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 D PAS_chr2-1_0137 Nuclear import receptor, mediates the nuclear localization of proteins involved in mRNA-nucleus expo K15436 TRPO3; transportin-3 D PAS_chr3_1128 Histone acetyltransferase, acetylates N-terminal lysines on histones H2B and H3 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] D PAS_chr2-1_0350 Protein that forms a complex with Spt5p and mediates both activation and inhibition of transcription K15171 SUPT4H1; transcription elongation factor SPT4 D PAS_chr3_1136 Protein that forms a complex with Spt4p K15172 SUPT5H; transcription elongation factor SPT5 D PAS_chr2-2_0243 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus K14290 XPO1; exportin-1 D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_FragB_0049 Vacuolar protein sorting-associated protein 27 K12182 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate D PAS_chr3_0136 Component of the ESCRT-I complex, which is involved in ubiquitin-dependent sorting of proteins into K12183 TSG101; ESCRT-I complex subunit TSG101 D PAS_chr4_0420 Myristoylated subunit of ESCRTIII K12195 CHMP6; charged multivesicular body protein 6 D PAS_chr1-4_0023 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III) K12194 CHMP4A_B; charged multivesicular body protein 4A/B D PAS_chr1-3_0184 Protein involved in proteolytic activation of Rim101p in response to alkaline pH K12200 PDCD6IP; programmed cell death 6-interacting protein D PAS_chr2-1_0572 AAA-type ATPase that is regulated by Vta1p K12196 VPS4; vacuolar protein-sorting-associated protein 4 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus D PAS_chr1-1_0168 Vacuolar membrane protein that transits through the biosynthetic vacuolar protein sorting pathway K12385 NPC1; Niemann-Pick C1 protein C 03266 Virion - Herpesvirus D PAS_chr1-4_0511 Metalloprotease K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ppa02010] D PAS_chr2-1_0613 Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter K05657 ABCB10; ATP-binding cassette, subfamily B (MDR/TAP), member 10 D PAS_chr2-1_0050 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of A-factor, catalyze K05658 ABCB1; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] D PAS_chr3_0858 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of A-factor K05658 ABCB1; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] D PAS_chr4_0473 Mitochondrial inner membrane ATP-binding cassette (ABC) transporter K05662 ABCB7; ATP-binding cassette, subfamily B (MDR/TAP), member 7 D PAS_chr1-4_0619 Metal resistance protein YCF1 K05665 ABCC1; ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] D PAS_chr1-4_0562 Bile pigment transporter K05665 ABCC1; ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] D PAS_chr4_0188 Plasma membrane ATP-binding cassette (ABC) transporter K05665 ABCC1; ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] D PAS_chr4_0186 Plasma membrane ATP-binding cassette (ABC) transporter K05665 ABCC1; ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] D PAS_chr3_0822 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) K15628 PXA; ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein [EC:7.6.2.4] D PAS_chr2-2_0272 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) K15628 PXA; ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein [EC:7.6.2.4] D PAS_chr3_0935 Putative ATP-dependent permease of the ABC transporter family of proteins K05681 ABCG2; ATP-binding cassette, subfamily G (WHITE), member 2 D PAS_chr1-1_0398 Plasma membrane ATP binding cassette (ABC) transporter K08711 PDR; ATP-binding cassette, subfamily G (WHITE), member 2, PDR D PAS_chr2-2_0299 Plasma membrane ATP binding cassette (ABC) transporter K08711 PDR; ATP-binding cassette, subfamily G (WHITE), member 2, PDR D PAS_chr4_0832 Plasma membrane ATP-binding cassette (ABC) transporter K08712 SNQ2; ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 D PAS_chr2-1_0280 Plasma membrane ATP-binding cassette (ABC) transporter, multidrug transporter involved in multidrug K08712 SNQ2; ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system B B 09132 Signal transduction C 02020 Two-component system C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast [PATH:ppa04011] D PAS_chr4_0123 Receptor for alpha-factor pheromone K11213 STE2; pheromone alpha factor receptor D PAS_chr3_0861 Receptor for a factor receptor, transcribed in alpha cells and required for mating by alpha cells K04627 STE3; pheromone a factor receptor D PAS_chr2-1_0357 Palmitoylated, plasma membrane-bound casein kinase I isoform K02218 CSNK1; casein kinase 1 [EC:2.7.11.1] D PAS_chr4_0568 Palmitoylated, plasma membrane-bound casein kinase I isoform K02218 CSNK1; casein kinase 1 [EC:2.7.11.1] D PAS_chr2-1_0354 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26] D PAS_chr1-1_0096 GTP-binding alpha subunit of the heterotrimeric G protein that couples to pheromone receptors K19860 GPA1; guanine nucleotide-binding protein alpha-1 subunit D PAS_chr1-1_0201 G protein beta subunit, forms a dimer with Ste18p to activate the mating signaling pathway K04536 GNB1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 D PAS_chr4_0766 hypothetical protein K07973 GNG; guanine nucleotide-binding protein subunit gamma, fungi D PAS_chr3_0840 GTPase-activating protein for Gpa1p, regulates desensitization to alpha factor pheromone K19838 SST2; GTPase-activating protein SST2 D PAS_chr1-4_0533 Guanine nucleotide exchange factor (GEF or GDP-release factor) for Cdc42p K11236 CDC24; cell division control protein 24 D PAS_chr2-1_0112 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04393 CDC42; cell division control protein 42 D PAS_chr1-3_0159 GTPase-activating protein for the polarity-establishment protein Cdc42p K19839 RGA1_2; Rho-type GTPase-activating protein 1/2 D PAS_chr1-4_0424 Rho GTPase activating protein (RhoGAP) involved in control of the cytoskeleton organization K19840 BEM3; Rho-type GTPase-activating protein D PAS_chr2-1_0548 Protein containing SH3-domains, involved in establishing cell polarity and morphogenesis K11237 BEM1; bud emergence protein 1 D PAS_c131_0004 hypothetical protein K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1] D PAS_chr4_0313 Member of the PAK family of serine/threonine protein kinases with similarity to Ste20p and Cla4p K19833 CLA4; serine/threonine-protein kinase CLA4 [EC:2.7.11.1] D PAS_chr4_0636 Formin, nucleates the formation of linear actin filaments K11238 BNI1; cytokinesis protein D PAS_chr3_0469 signal transducing MEK kinase K11228 STE11; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25] D PAS_chr1-1_0348 Protein involved in mating response, invasive/filamentous growth, and osmotolerance K19841 STE50; protein STE50 D PAS_chr1-4_0438 hypothetical protein K11239 STE5; pheromone-response scaffold protein D PAS_chr1-4_0008 MAP kinase K11226 STE7; mitogen-activated protein kinase kinase [EC:2.7.12.2] D PAS_chr4_0530 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr2-1_0872 hypothetical protein K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr1-3_0061 Phosphotyrosine-specific protein phosphatase K19806 PTP2_3; tyrosine-protein phosphatase 2/3 [EC:3.1.3.48] D PAS_chr2-1_0203 Phosphotyrosine-specific protein phosphatase involved in the inactivation of mitogen-activated prote K19806 PTP2_3; tyrosine-protein phosphatase 2/3 [EC:3.1.3.48] D PAS_chr3_0618 Dual-specificity protein phosphatase K11240 MSG5; tyrosine-protein phosphatase MSG5 [EC:3.1.3.48] D PAS_chr4_0937 hypothetical protein K11215 STE12; transcription factor STE12 D PAS_chr3_0968 Transcription factor involved in cell-type-specific transcription and pheromone response K12412 MCM1; pheromone receptor transcription factor D PAS_chr1-3_0307 hypothetical protein K06652 FAR1; cyclin-dependent kinase inhibitor FAR1 D PAS_FragB_0046 G1/S-specific cyclin K06650 CLN2; G1/S-specific cyclin CLN2 D PAS_chr4_0950 hypothetical protein K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22] D PAS_chr3_0673 Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway K11244 WSC; cell wall integrity and stress response component D PAS_chr1-4_0415 hypothetical protein K11244 WSC; cell wall integrity and stress response component D PAS_chr1-4_0416 hypothetical protein K11244 WSC; cell wall integrity and stress response component D PAS_chr2-1_0586 Guanine nucleotide exchange factor (GEF) K19843 TUS1; Rho1 guanine nucleotide exchange factor TUS1 D PAS_chr1-3_0100 Phosphatidylinositol-4-kinase that functions in the Pkc1p protein kinase pathway K00888 PI4KA; phosphatidylinositol 4-kinase A [EC:2.7.1.67] D PAS_chr1-1_0457 Phosphatidylinositol-4-phosphate 5-kinase K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68] D PAS_chr3_0150 GTP-binding protein of the rho subfamily of Ras-like proteins, involved in establishment of cell pol K04513 RHOA; Ras homolog gene family, member A D PAS_chr2-2_0095 Rho GTPase activating protein (RhoGAP) K19844 BEM2; GTPase-activating protein BEM2 D PAS_chr2-1_0117 GTPase activating protein (GAP) for Rho1p, involved in signaling to the actin cytoskeleton, null mut K19845 SAC7; GTPase-activating protein SAC7 D PAS_chr2-1_0118 GTPase activating protein (GAP) for Rho1p, involved in signaling to the actin cytoskeleton, null mut K19845 SAC7; GTPase-activating protein SAC7 D PAS_FragB_0058 hypothetical protein K17971 BNR1; BNI1-related protein 1 D PAS_chr2-1_0124 Elongation factor 2 (EF-2), also encoded by EFT1 K02677 PRKCA; classical protein kinase C alpha type [EC:2.7.11.13] D PAS_chr1-4_0069 Protein kinase with similarity to mammalian phosphoinositide-dependent kinase 1 (PDK1) K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1] D PAS_chr3_0220 Mitogen-activated protein (MAP) kinase kinase kinase K11229 BCK1; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25] D PAS_chr1-4_0271 Mitogen-activated kinase kinase involved in protein kinase C signaling pathway K08294 MKK1_2; mitogen-activated protein kinase kinase [EC:2.7.12.2] D PAS_chr3_0816 Component of the polarisome K19846 SPA2; protein SPA2 D PAS_chr4_0093 Putative transcription factor involved in regulating the response to osmotic stress K09265 RLM1; transcription factor RLM1 D PAS_chr2-1_0661 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr2-1_0263 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr1-3_0225 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr4_0902 RNAP II-associated protein K15174 PAF1; RNA polymerase II-associated factor 1 D PAS_chr1-3_0098 DNA binding component of the SBF complex (Swi4p-Swi6p), a transcriptional activator K06649 SWI4; regulatory protein SWI4 D PAS_chr4_0634 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p K06648 SWI6; regulatory protein SWI6 D PAS_chr1-1_0273 Protein tyrosine phosphatase involved in cell cycle control K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D PAS_chr2-1_0102 B-type cyclin involved in cell cycle progression K23469 CLB2; G2/mitotic-specific cyclin 2 D PAS_chr1-3_0149 Transmembrane osmosensor K11246 SHO1; SHO1 osmosensor D PAS_chr3_0637 hypothetical protein K19850 OPY2; protein OPY2 D PAS_chr4_0315 Histidine kinase osmosensor that regulates a MAP kinase cascade K11231 SLN1; osomolarity two-component system, sensor histidine kinase SLN1 [EC:2.7.13.3] D PAS_chr2-2_0033 Phosphorelay intermediate protein K11232 YPD1; osomolarity two-component system, phosphorelay intermediate protein YPD1 D PAS_chr3_0849 Cytoplasmic response regulator, part of a two-component signal transducer that mediates osmosensing K11233 SSK1; osomolarity two-component system, response regulator SSK1 D PAS_chr1-4_0279 MAP kinase kinase kinase of the HOG1 mitogen-activated signaling pathway K11230 SSK2; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25] D PAS_chr1-1_0105 MAP kinase kinase that plays a pivotal role in the osmosensing signal-transduction pathway K11227 PBS2; mitogen-activated protein kinase kinase [EC:2.7.12.2] D PAS_chr1-3_0232 Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors K04441 P38; p38 MAP kinase [EC:2.7.11.24] D PAS_chr4_0986 hypothetical protein K19704 PTC1; protein phosphatase PTC1 [EC:3.1.3.16] D PAS_chr2-2_0111 NAD-dependent glycerol-3-phosphate dehydrogenase, key enzyme of glycerol synthesis K00006 GPD1; glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8] D PAS_chr2-2_0131 Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1 K03781 katE; catalase [EC:1.11.1.6] D PAS_chr1-1_0165 hypothetical protein K09051 SKO1; ATF/CREB family transcription factor D PAS_chr2-1_0762 General transcriptional co-repressor, acts together with Tup1p K06665 SSN6; general transcriptional corepressor CYC8 D PAS_chr3_1001 General repressor of transcription, forms complex with Cyc8p K06666 TUP1; general transcriptional corepressor TUP1 D PAS_chr3_0447 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0446 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0448 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0449 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr3_0014 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr4_0336 Putative dihydrokaempferol 4-reductase K17741 GRE2; NADPH-dependent methylglyoxal reductase [EC:1.1.1.283] D PAS_chr2-2_0491 hypothetical protein K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320] D PAS_chr3_0624 Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D PAS_chr4_0584 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor K06009 YPS1_2; yapsin 1/2 [EC:3.4.23.41] D PAS_chr2-1_0809 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D PAS_chr3_0092 Transcription factor required for full Ty1 epxression, Ty1-mediated gene activation, and haploid inv K09448 TEAD; transcriptional enhancer factor C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species [PATH:ppa04392] D PAS_chr1-4_0419 Component of the mitotic exit network K06685 MOB1; MOB kinase activator 1 D PAS_chr3_0092 Transcription factor required for full Ty1 epxression, Ty1-mediated gene activation, and haploid inv K09448 TEAD; transcriptional enhancer factor D PAS_chr2-1_0357 Palmitoylated, plasma membrane-bound casein kinase I isoform K02218 CSNK1; casein kinase 1 [EC:2.7.11.1] D PAS_chr4_0568 Palmitoylated, plasma membrane-bound casein kinase I isoform K02218 CSNK1; casein kinase 1 [EC:2.7.11.1] D PAS_chr3_1061 Protein kinase of the Mitotic Exit Network K06683 CDC15; cell division control protein CDC15 [EC:2.7.11.1] D PAS_chr3_0727 hypothetical protein K20237 NUD1; protein NUD1 D PAS_chr3_0752 Ser/Thr kinase involved in transcription and stress response K06684 DBF2; cell cycle protein kinase DBF2 [EC:2.7.11.-] D PAS_c131_0004 hypothetical protein K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1] C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system [PATH:ppa04070] D PAS_chr1-3_0100 Phosphatidylinositol-4-kinase that functions in the Pkc1p protein kinase pathway K00888 PI4KA; phosphatidylinositol 4-kinase A [EC:2.7.1.67] D PAS_chr1-4_0380 Phosphatidylinositol 4-kinase K19801 PI4KB; phosphatidylinositol 4-kinase B [EC:2.7.1.67] D PAS_chr1-4_0143 Type II phosphatidylinositol 4-kinase that binds Las17p K13711 PI4K2; phosphatidylinositol 4-kinase type 2 [EC:2.7.1.67] D PAS_chr1-4_0617 Phosphatidylinositol (PI) phosphatase K21797 SAC1; phosphatidylinositol 4-phosphatase [EC:3.1.3.-] D PAS_chr1-1_0457 Phosphatidylinositol-4-phosphate 5-kinase K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68] D PAS_chr2-1_0178 Polyphosphatidylinositol phosphatase, dephosphorylates multiple phosphatidylinositols K20279 SYNJ; synaptojanin [EC:3.1.3.36] D PAS_chr2-1_0424 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sa K20279 SYNJ; synaptojanin [EC:3.1.3.36] D PAS_chr2-2_0351 hypothetical protein K01110 PTEN; phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [EC:3.1.3.16 3.1.3.48 3.1.3.67] D PAS_chr3_0354 Phosphatidylinositol 3-phosphate [PI(3)P] phosphatase K18083 MTMR6_7_8; myotubularin-related protein 6/7/8 [EC:3.1.3.64 3.1.3.95] D PAS_chr4_0478 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137] D PAS_chr4_0700 Phospholipase C K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11] D PAS_chr1-4_0293 Inositol polyphosphate multikinase (IPMK) K00915 IPMK; inositol-polyphosphate multikinase [EC:2.7.1.140 2.7.1.151] D PAS_chr3_0630 hypothetical protein K19786 IPK1; inositol-pentakisphosphate 2-kinase [EC:2.7.1.158] D PAS_chr1-1_0005 Inositol hexakisphosphate and inositol heptakisphosphate kinase K13024 PPIP5K; inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24] D PAS_chr4_0730 Inositol monophosphatase, involved in biosynthesis of inositol K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAS_chr2-2_0044 Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PAS_chr2-1_0695 Phosphatidylinositol synthase, required for biosynthesis of phosphatidylinositol K00999 CDIPT; CDP-diacylglycerol--inositol 3-phosphatidyltransferase [EC:2.7.8.11] D PAS_chr2-1_0124 Elongation factor 2 (EF-2), also encoded by EFT1 K02677 PRKCA; classical protein kinase C alpha type [EC:2.7.11.13] D PAS_chr2-1_0758 Calmodulin K02183 CALM; calmodulin D PAS_chr2-2_0435 hypothetical protein K02183 CALM; calmodulin C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis [PATH:ppa04144] D PAS_chr4_0214 Glucose-repressible ADP-ribosylation factor K07941 ARF6; ADP-ribosylation factor 6 D PAS_chr1-1_0457 Phosphatidylinositol-4-phosphate 5-kinase K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68] D PAS_chr3_0646 Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D PAS_chr1-4_0546 Clathrin heavy chain, subunit of the major coat protein K04646 CLTC; clathrin heavy chain D PAS_chr2-1_0496 Alpha-adaptin, large subunit of the clathrin associated protein complex (AP-2) K11824 AP2A; AP-2 complex subunit alpha D PAS_chr3_0079 Beta-adaptin, large subunit of the clathrin associated protein complex (AP-2) K11825 AP2B1; AP-2 complex subunit beta-1 D PAS_chr2-2_0175 Mu2-like subunit of the clathrin associated protein complex (AP-2) K11826 AP2M1; AP-2 complex subunit mu-1 D PAS_chr3_1047 Small subunit of the clathrin-associated adaptor complex AP-2 K11827 AP2S1; AP-2 complex subunit sigma-1 D PAS_chr2-1_0116 Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) K12562 AMPH; amphiphysin D PAS_chr3_0498 Actin-associated protein K12562 AMPH; amphiphysin D PAS_chr3_0983 Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) K12562 AMPH; amphiphysin D PAS_chr1-4_0244 Epsin-like protein involved in endocytosis and actin patch assembly K12471 EPN; epsin D PAS_FragB_0073 hypothetical protein K12471 EPN; epsin D PAS_chr4_0763 Protein containing an N-terminal epsin-like domain K12471 EPN; epsin D PAS_chr2-1_0651 Key endocytic protein involved in a network of interactions with other endocytic proteins K12472 EPS15; epidermal growth factor receptor substrate 15 D PAS_chr2-1_0354 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26] D PAS_chr1-4_0623 Actin assembly factor, activates the Arp2/3 protein complex that nucleates branched actin filaments K23612 WASL; neural Wiskott-Aldrich syndrome protein D PAS_chr3_0458 Essential component of the Arp2/3 complex K17260 ACTR2; actin-related protein 2 D PAS_chr2-1_0556 Essential component of the Arp2/3 complex K18584 ACTR3; actin-related protein 3 D PAS_chr2-2_0328 Subunit of the ARP2/3 complex K05757 ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B D PAS_chr3_1121 Subunit of the ARP2/3 complex K05758 ARPC2; actin related protein 2/3 complex, subunit 2 D PAS_chr3_0238 Subunit of the ARP2/3 complex K05756 ARPC3; actin related protein 2/3 complex, subunit 3 D PAS_chr1-4_0185 Subunit of the ARP2/3 complex K05755 ARPC4; actin related protein 2/3 complex, subunit 4 D PAS_chr2-2_0029 Subunit of the ARP2/3 complex K05754 ARPC5; actin related protein 2/3 complex, subunit 5 D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_c131_0006 hypothetical protein K10364 CAPZA; F-actin-capping protein subunit alpha D PAS_chr3_0548 Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) K10365 CAPZB; F-actin-capping protein subunit beta D PAS_chr3_1146 hypothetical protein K18467 VPS29; vacuolar protein sorting-associated protein 29 D PAS_chr4_0074 Vacuolar protein sorting protein K18466 VPS26A_B; vacuolar protein sorting-associated protein 26A/B D PAS_chr1-4_0503 Endosomal subunit of membrane-associated retromer complex required for retrograde transport K18468 VPS35; vacuolar protein sorting-associated protein 35 D PAS_chr3_0639 Sorting nexin K17918 SNX3_12; sorting nexin-3/12 D PAS_chr1-3_0261 Ubiquitin isopeptidase K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12] D PAS_chr2-2_0056 hypothetical protein K11866 STAMBP; STAM-binding protein [EC:3.4.19.12] D PAS_chr4_0899 GTP-binding protein K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr2-1_0669 GTPase K07897 RAB7A; Ras-related protein Rab-7A D PAS_FragB_0049 Vacuolar protein sorting-associated protein 27 K12182 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate D PAS_c131_0007 hypothetical protein K04705 STAM; signal transducing adaptor molecule D PAS_chr3_0136 Component of the ESCRT-I complex, which is involved in ubiquitin-dependent sorting of proteins into K12183 TSG101; ESCRT-I complex subunit TSG101 D PAS_chr2-1_0182 Component of the ESCRT-I complex (Stp22p, Srn2p, Vps28p, and Mvb12p), which is involved in ubiquitin K12184 VPS28; ESCRT-I complex subunit VPS28 D PAS_chr3_1165 hypothetical protein K12188 SNF8; ESCRT-II complex subunit VPS22 D PAS_chr3_0312 Component of the ESCRT-II complex K12190 VPS36; ESCRT-II complex subunit VPS36 D PAS_chr4_0993 hypothetical protein K12189 VPS25; ESCRT-II complex subunit VPS25 D PAS_chr4_0420 Myristoylated subunit of ESCRTIII K12195 CHMP6; charged multivesicular body protein 6 D PAS_chr1-4_0023 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III) K12194 CHMP4A_B; charged multivesicular body protein 4A/B D PAS_chr1-1_0034 vacuolar sorting protein K12193 VPS24; charged multivesicular body protein 3 D PAS_c131_0013 hypothetical protein K12191 CHMP2A; charged multivesicular body protein 2A D PAS_chr1-3_0288 hypothetical protein K15053 CHMP7; charged multivesicular body protein 7 D PAS_chr2-1_0572 AAA-type ATPase that is regulated by Vta1p K12196 VPS4; vacuolar protein-sorting-associated protein 4 D PAS_chr4_0635 hypothetical protein K12199 VTA1; vacuolar protein sorting-associated protein VTA1 D PAS_chr1-4_0657 Vacuolar protein sorting protein K12197 CHMP1; charged multivesicular body protein 1 D PAS_chr3_0168 Cytoplasmic and vacuolar membrane protein involved in late endosome to vacuole transport K12198 CHMP5; charged multivesicular body protein 5 D PAS_chr1-1_0369 Protein with a positive role in the multivesicular body sorting pathway K19476 IST1; vacuolar protein sorting-associated protein IST1 D PAS_chr1-3_0184 Protein involved in proteolytic activation of Rim101p in response to alkaline pH K12200 PDCD6IP; programmed cell death 6-interacting protein D PAS_chr3_0990 Nexin-1 homolog required for localizing membrane proteins K17917 SNX1_2; sorting nexin-1/2 D PAS_chr3_0150 GTP-binding protein of the rho subfamily of Ras-like proteins, involved in establishment of cell pol K04513 RHOA; Ras homolog gene family, member A D PAS_chr1-4_0162 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5 K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0219 GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr2-1_0830 hypothetical protein K12481 RBSN; rabenosyn-5 D PAS_chr1-1_0150 Protein of the Sec1p/Munc-18 family, essential for vacuolar protein sorting K12479 VPS45; vacuolar protein sorting-associated protein 45 D PAS_chr2-1_0389 Sorting nexin K17919 SNX4; sorting nexin-4 D PAS_chr3_0143 Secretory vesicle-associated Rab GTPase essential for exocytosis K07901 RAB8A; Ras-related protein Rab-8A D PAS_chr1-4_0528 GTPase of the Ypt/Rab family, very similar to Ypt31p K07905 RAB11B; Ras-related protein Rab-11B D PAS_chr2-1_0112 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04393 CDC42; cell division control protein 42 D PAS_chr1-4_0340 ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector K12486 SMAP; stromal membrane-associated protein D PAS_chr3_1109 Protein that localizes to the nucleus and is involved in transcription regulation K12486 SMAP; stromal membrane-associated protein D PAS_chr3_0974 ADP-ribosylation factor GTPase activating protein (ARF GAP), involved in ER-Golgi transport K12492 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 D PAS_chr3_0559 ADP-ribosylation factor GTPase activating protein (ARF GAP) K12493 ARFGAP2_3; ADP-ribosylation factor GTPase-activating protein 2/3 D PAS_chr1-4_0667 hypothetical protein K18442 ARFGEF; brefeldin A-inhibited guanine nucleotide-exchange protein D PAS_chr1-4_0432 Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs) K18443 GBF1; golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 D PAS_chr2-2_0087 ADP-ribosylation factor, GTPase of the Ras superfamily K07937 ARF1_2; ADP-ribosylation factor 1/2 C 04145 Phagosome [PATH:ppa04145] D PAS_chr3_0989 t-SNARE required for ER membrane fusion and vesicular traffic K08492 STX18; syntaxin 18 D PAS_chr3_0274 R-SNARE protein K08517 SEC22; vesicle transport protein SEC22 D PAS_chr1-4_0162 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5 K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0219 GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0478 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137] D PAS_FragB_0049 Vacuolar protein sorting-associated protein 27 K12182 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate D PAS_chr1-1_0309 Vacuolar ATPase V1 domain subunit A containing the catalytic nucleotide binding sites K02145 ATPeV1A; V-type H+-transporting ATPase subunit A [EC:7.1.2.2] D PAS_c131_0021 vacuolar ATP synthase subunit B K02147 ATPeV1B; V-type H+-transporting ATPase subunit B D PAS_chr2-1_0246 Subunit C of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) K02148 ATPeV1C; V-type H+-transporting ATPase subunit C D PAS_chr1-1_0195 Subunit D of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) K02149 ATPeV1D; V-type H+-transporting ATPase subunit D D PAS_chr3_0704 Subunit E of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) K02150 ATPeV1E; V-type H+-transporting ATPase subunit E D PAS_chr4_0674 Subunit F of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) K02151 ATPeV1F; V-type H+-transporting ATPase subunit F D PAS_chr4_0255 hypothetical protein K02152 ATPeV1G; V-type H+-transporting ATPase subunit G D PAS_chr3_0137 Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex K02153 ATPeV0E; V-type H+-transporting ATPase subunit e D PAS_chr3_1093 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) K02154 ATPeV0A; V-type H+-transporting ATPase subunit a D PAS_chr1-3_0066 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) K02154 ATPeV0A; V-type H+-transporting ATPase subunit a D PAS_chr2-2_0227 Subunit d of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase) K02146 ATPeV0D; V-type H+-transporting ATPase subunit d D PAS_chr4_0990 hypothetical protein K02144 ATPeV1H; V-type H+-transporting ATPase subunit H D PAS_chr3_1040 Proteolipid subunit of the vacuolar H(+)-ATPase V0 sector K02155 ATPeV0C; V-type H+-transporting ATPase 16kDa proteolipid subunit D PAS_chr2-1_0687 Vacuolar ATPase V0 domain subunit c', involved in proton transport activity K02155 ATPeV0C; V-type H+-transporting ATPase 16kDa proteolipid subunit D PAS_chr3_1236 hypothetical protein K03661 ATPeV0B; V-type H+-transporting ATPase 21kDa proteolipid subunit D PAS_chr4_0899 GTP-binding protein K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr2-1_0669 GTPase K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr1-4_0443 hypothetical protein K10415 DYNC1I; dynein cytoplasmic 1 intermediate chain D PAS_chr2-1_0186 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0623 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0533 Beta-tubulin K07375 TUBB; tubulin beta D PAS_chr1-4_0629 Subunit of the Ssh1 translocon complex K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr1-3_0202 Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p) K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr2-2_0210 Beta subunit of the Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p) K09481 SEC61B; protein transport protein SEC61 subunit beta D PAS_chr1-1_0023 hypothetical protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D PAS_chr2-1_0322 Calnexin K08054 CANX; calnexin D PAS_chr1-3_0113 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04392 RAC1; Ras-related C3 botulinum toxin substrate 1 C 04142 Lysosome C 04146 Peroxisome [PATH:ppa04146] D PAS_chr3_1073 Peroxisomal membrane protein (PMP) K13336 PEX3; peroxin-3 D PAS_chr2-1_0715 PEX19; peroxisomal biogenesis protein K13337 PEX19; peroxin-19 D PAS_chr3_1045 Peroxisome biosynthesis protein PAS1 K13338 PEX1; peroxin-1 D PAS_chr1-4_0133 AAA-peroxin that heterodimerizes with AAA-peroxin Pex1p K13339 PEX6; peroxin-6 D PAS_chr1-4_0433 Peroxisomal signal receptor for the N-terminal nonapeptide signal of peroxisomal matrix proteins K13341 PEX7; peroxin-7 D PAS_chr2-2_0186 Peroxisomal membrane signal receptor for the C-terminal tripeptide signal sequence (PTS1) K13342 PEX5; peroxin-5 D PAS_chr4_0794 Peroxisomal membrane peroxin that is a central component of the peroxisomal protein import machinery K13343 PEX14; peroxin-14 D PAS_chr2-2_0207 Integral peroxisomal membrane required for the translocation of peroxisomal matrix proteins K13344 PEX13; peroxin-13 D PAS_chr4_0759 C3HC4-type RING-finger peroxisomal membrane peroxin K13345 PEX12; peroxin-12 D PAS_chr3_0043 peroxisomal integral membrane protein K06664 PEX2; peroxin-2 D PAS_chr2-2_0273 Protein required for ethanol metabolism K13348 MPV17; protein Mpv17 D PAS_chr1-1_0352 hypothetical protein K13350 PXMP4; peroxisomal membrane protein 4 D PAS_chr2-1_0504 Peroxisomal membrane protein K13352 PEX11B; peroxin-11B D PAS_chr3_0099 Mitochondrial NAD+ transporter, involved in the transport of NAD+ into the mitochondria (see also YE K13354 SLC25A17; solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17 D PAS_chr1-1_0394 hypothetical protein with low sequence identity to Pdc1p K12261 HACL1; 2-hydroxyacyl-CoA lyase [EC:4.1.2.63] D PAS_FragB_0025 Phytanoyl-CoA dioxygenase domain-containing protein K00477 PHYH; phytanoyl-CoA hydroxylase [EC:1.14.11.18] D PAS_chr1-4_0538 Fatty-acyl coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAS_chr2-2_0267 3-ketoacyl-CoA thiolase with broad chain length specificity K07513 ACAA1; acetyl-CoA acyltransferase 1 [EC:2.3.1.16] D PAS_chr3_0975 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation K13237 DECR2; 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], peroxisomal [EC:1.3.1.124] D PAS_FragB_0022 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial K12663 ECH1; Delta3,5-Delta2,4-dienoyl-CoA isomerase [EC:5.3.3.21] D PAS_chr3_0822 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) K15628 PXA; ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein [EC:7.6.2.4] D PAS_chr2-2_0272 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) K15628 PXA; ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein [EC:7.6.2.4] D PAS_chr2-1_0785 Long chain fatty acyl-CoA synthetase with a preference for C12:0-C16:0 fatty acids K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr4_0352 Long chain fatty acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr1-4_0663 hypothetical protein K13239 ECI2; Delta3-Delta2-enoyl-CoA isomerase [EC:5.3.3.8] D PAS_chr3_0069 Carnitine acetyl-CoA transferase present in both mitochondria and peroxisomes, transfers activated A K00624 E2.3.1.7; carnitine O-acetyltransferase [EC:2.3.1.7] D PAS_chr1-4_0074 Outer mitochondrial carnitine acetyltransferase, minor ethanol-inducible enzyme K00624 E2.3.1.7; carnitine O-acetyltransferase [EC:2.3.1.7] D PAS_chr3_0761 Carnitine acetyltransferase K00624 E2.3.1.7; carnitine O-acetyltransferase [EC:2.3.1.7] D PAS_chr1-3_0187 Mevalonate kinase, acts in the biosynthesis of isoprenoids and sterols, including ergosterol K00869 MVK; mevalonate kinase [EC:2.7.1.36] D PAS_chr4_0416 Alanine:glyoxylate aminotransferase (AGT), catalyzes the synthesis of glycine from glyoxylate K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PAS_chr3_1033 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D PAS_chr3_0406 D-aspartate oxidase K00272 DDO; D-aspartate oxidase [EC:1.4.3.1] D PAS_chr1-1_0233 Mitochondrial NADP-specific isocitrate dehydrogenase, catalyzes the oxidation of isocitrate K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAS_chr2-1_0580 Cytosolic NADP-specific isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAS_chr2-2_0131 Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1 K03781 katE; catalase [EC:1.11.1.6] D PAS_chr2-1_0502 Thiol-specific peroxiredoxin, reduces hydroperoxides to protect against oxidative damage K11187 PRDX5; peroxiredoxin 5 [EC:1.11.1.24] D PAS_chr4_0786 Cytosolic superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D PAS_chr2-1_0230 Mitochondrial ribosomal protein of the small subunit K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] D PAS_chr4_0788 Mitochondrial ribosomal protein of the small subunit K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] D PAS_chr1-4_0071 Mitochondrial superoxide dismutase, protects cells against oxygen toxicity K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] D PAS_chr2-2_0112 hypothetical protein K00106 XDH; xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] C 04140 Autophagy - animal C 04138 Autophagy - yeast [PATH:ppa04138] D PAS_chr4_0680 GTP-binding protein K07827 KRAS; GTPase KRas D PAS_chr3_0133 GTP-binding protein of the ras superfamily required for bud site selection K07827 KRAS; GTPase KRas D PAS_chr1-4_0357 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr3_0964 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr2-1_0639 Upstream serine/threonine kinase for the SNF1 complex K21157 SAK1; SNF1-activating kinase 1 [EC:2.7.11.1] D PAS_chr2-1_0855 hypothetical protein K12761 SNF1; carbon catabolite-derepressing protein kinase [EC:2.7.11.1] D PAS_chr2-1_0641 Protein serine/threonine kinase required for vesicle formation in autophagy K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1] D PAS_chr2-2_0432 Regulatory subunit of the Atg1p signaling complex K08331 ATG13; autophagy-related protein 13 D PAS_chr2-1_0672 Scaffold protein responsible for pre-autophagosomal structure organization K08329 ATG17; autophagy-related protein 17 D PAS_chr4_0510 Transmembrane protein involved in formation of Cvt and autophagic vesicles K17907 ATG9; autophagy-related protein 9 D PAS_chr1-3_0168 Peripheral membrane protein required for vesicle formation K17906 ATG2; autophagy-related protein 2 D PAS_chr3_0931 Phosphoinositide binding protein required for vesicle formation in autophagy K17908 WIPI1_2; autophagy-related protein 18 D PAS_chr3_1016 Phosphoinositide binding protein K17908 WIPI1_2; autophagy-related protein 18 D PAS_chr2-2_0110 Type I membrane protein involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K21141 ATG27; autophagy-related protein 27 D PAS_chr1-4_0555 Adapter protein for pexophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08330 ATG11; autophagy-related protein 11 D PAS_chr3_0458 Essential component of the Arp2/3 complex K17260 ACTR2; actin-related protein 2 D PAS_chr2-1_0556 Essential component of the Arp2/3 complex K18584 ACTR3; actin-related protein 3 D PAS_chr2-2_0328 Subunit of the ARP2/3 complex K05757 ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B D PAS_chr3_1121 Subunit of the ARP2/3 complex K05758 ARPC2; actin related protein 2/3 complex, subunit 2 D PAS_chr3_0238 Subunit of the ARP2/3 complex K05756 ARPC3; actin related protein 2/3 complex, subunit 3 D PAS_chr1-4_0185 Subunit of the ARP2/3 complex K05755 ARPC4; actin related protein 2/3 complex, subunit 4 D PAS_chr2-2_0029 Subunit of the ARP2/3 complex K05754 ARPC5; actin related protein 2/3 complex, subunit 5 D PAS_chr3_0893 Protein kinase involved in transcriptional activation of osmostress-responsive genes K19800 SCH9; serine/threonine protein kinase SCH9 [EC:2.7.11.1] D PAS_chr3_0733 Component of serine palmitoyltransferase K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] D PAS_FragB_0040 Serine palmitoyltransferase 1 K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] D PAS_chr2-1_0459 Subunit of TORC1, a rapamycin-sensitive complex involved in growth control K07204 RAPTOR; regulatory associated protein of mTOR D PAS_chr2-1_0557 PIK-related protein kinase and rapamycin target K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] D PAS_chr2-2_0150 Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface K08266 MLST8; target of rapamycin complex subunit LST8 D PAS_chr1-4_0119 Essential protein involved in the TOR signaling pathway K17606 IGBP1; immunoglobulin-binding protein 1 D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr3_0339 Protein that interacts physically and genetically with Tap42p, which regulates protein phosphatase 2 K17607 TIPRL; type 2A phosphatase activator TIP41 D PAS_chr3_0148 Glucose-repressible protein kinase involved in signal transduction during cell proliferation in resp K12767 RIM15; serine/threonine-protein kinase RIM15 [EC:2.7.11.36] D PAS_chr3_0850 Protein kinase, phosphorylates the alpha-subunit of translation initiation factor eIF2 (Sui2p) K16196 EIF2AK4; eukaryotic translation initiation factor 2-alpha kinase 4 [EC:2.7.11.1] D PAS_chr3_0077 Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start K03237 EIF2S1; translation initiation factor 2 subunit 1 D PAS_chr1-4_0339 Transcriptional activator K09464 GCN4; general control protein GCN4 D PAS_chr3_0214 Cyclin-dependent kinase K06655 PHO85; negative regulator of the PHO system [EC:2.7.11.22] D PAS_chr1-1_0097 Cyclin, interacts with Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcript K21197 PCL5; PHO85 cyclin-5 D PAS_chr4_0704 Conserved protein that is a component of autophagosomes and Cvt vesicles K08341 GABARAP; GABA(A) receptor-associated protein D PAS_chr2-1_0211 Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II K08334 BECN; beclin D PAS_chr3_0042 Myristoylated serine/threonine protein kinase involved in vacuolar protein sorting K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1] D PAS_chr4_0478 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137] D PAS_chr1-4_0293 Inositol polyphosphate multikinase (IPMK) K00915 IPMK; inositol-polyphosphate multikinase [EC:2.7.1.140 2.7.1.151] D PAS_chr3_0354 Phosphatidylinositol 3-phosphate [PI(3)P] phosphatase K18083 MTMR6_7_8; myotubularin-related protein 6/7/8 [EC:3.1.3.64 3.1.3.95] D PAS_chr3_0363 Conserved ubiquitin-like modifier K08336 ATG12; ubiquitin-like protein ATG12 D PAS_chr1-4_0310 Autophagy-related protein K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7 D PAS_chr4_0459 Conserved protein involved in autophagy and the Cvt pathway K08339 ATG5; autophagy-related protein 5 D PAS_chr3_0688 E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3 D PAS_chr1-4_0522 Conserved cysteine protease required for autophagy K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-] D PAS_chr2-2_0350 Target membrane receptor (t-SNARE) K21155 VAM3; syntaxin VAM3 D PAS_chr1-4_0500 hypothetical protein K08502 VAM7; regulator of vacuolar morphogenesis D PAS_chr3_1085 Protein involved in cis-Golgi membrane traffic K08493 VTI1; vesicle transport through interaction with t-SNAREs 1 D PAS_FragB_0006 Synaptobrevin homolog YKT6 K08516 YKT6; synaptobrevin homolog YKT6 D PAS_chr3_0342 ATPase required for the release of Sec17p K06027 NSF; vesicle-fusing ATPase [EC:3.6.4.6] D PAS_chr2-1_0644 Peripheral membrane protein required for vesicular transport between ER and Golgi K15296 NAPA; alpha-soluble NSF attachment protein D PAS_chr4_0899 GTP-binding protein K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr2-1_0669 GTPase K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr3_1107 Protein required for fusion of cvt-vesicles and autophagosomes with the vacuole K20195 MON1; vacuolar fusion protein MON1 D PAS_chr4_0614 hypothetical protein K21156 CCZ1; vacuolar fusion protein CCZ1, fungi type D PAS_chr1-3_0306 hypothetical protein K20179 VPS11; vacuolar protein sorting-associated protein 11 D PAS_chr3_0210 Subunit of the vacuole fusion and protein sorting HOPS complex and the CORVET tethering complex K20180 VPS16; vacuolar protein sorting-associated protein 16 D PAS_chr2-1_0574 Component of CORVET tethering complex K20181 VPS18; vacuolar protein sorting-associated protein 18 D PAS_chr2-2_0264 ATP-binding protein that is A subunit of the HOPS complex and the CORVET tethering complex K20182 VPS33A; vacuolar protein sorting-associated protein 33A D PAS_chr3_1175 hypothetical protein K20177 VPS3; vacuolar protein sorting-associated protein 3 D PAS_chr1-4_0606 Membrane-associated protein K20178 VPS8; vacuolar protein sorting-associated protein 8 D PAS_chr1-1_0460 hypothetical protein K20183 VPS39; Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 D PAS_chr4_0062 Vacuolar membrane protein K20184 VPS41; vacuolar protein sorting-associated protein 41 D PAS_chr1-1_0150 Protein of the Sec1p/Munc-18 family, essential for vacuolar protein sorting K12479 VPS45; vacuolar protein sorting-associated protein 45 D PAS_chr3_1087 Vacuolar aspartyl protease (proteinase A) K01381 PEP4; saccharopepsin [EC:3.4.23.25] D PAS_chr1-4_0548 Vacuolar proteinase B (YscB), a serine protease of the subtilisin family K01336 PRB1; cerevisin [EC:3.4.21.48 3.4.21.-] D PAS_chr1-1_0226 Vacuolar proteinase B (YscB), a serine protease of the subtilisin family K01336 PRB1; cerevisin [EC:3.4.21.48 3.4.21.-] D PAS_chr1-1_0465 hypothetical protein K17900 ATG15; lipase ATG15 [EC:3.1.1.3] D PAS_chr1-1_0353 Vacuolar integral membrane protein K06902 UMF1; MFS transporter, UMF1 family D PAS_chr3_0295 Vacuolar transporter K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter) D PAS_chr2-2_0343 Vacuolar transporter, exports large neutral amino acids from the vacuole K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter) C 04136 Autophagy - other [PATH:ppa04136] D PAS_chr2-1_0459 Subunit of TORC1, a rapamycin-sensitive complex involved in growth control K07204 RAPTOR; regulatory associated protein of mTOR D PAS_chr2-1_0557 PIK-related protein kinase and rapamycin target K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] D PAS_chr2-2_0150 Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface K08266 MLST8; target of rapamycin complex subunit LST8 D PAS_chr2-1_0641 Protein serine/threonine kinase required for vesicle formation in autophagy K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1] D PAS_chr2-2_0432 Regulatory subunit of the Atg1p signaling complex K08331 ATG13; autophagy-related protein 13 D PAS_chr3_0501 hypothetical protein K19730 ATG101; autophagy-related protein 101 D PAS_chr1-4_0555 Adapter protein for pexophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08330 ATG11; autophagy-related protein 11 D PAS_chr1-4_0119 Essential protein involved in the TOR signaling pathway K17606 IGBP1; immunoglobulin-binding protein 1 D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr4_0510 Transmembrane protein involved in formation of Cvt and autophagic vesicles K17907 ATG9; autophagy-related protein 9 D PAS_chr1-3_0168 Peripheral membrane protein required for vesicle formation K17906 ATG2; autophagy-related protein 2 D PAS_chr3_0931 Phosphoinositide binding protein required for vesicle formation in autophagy K17908 WIPI1_2; autophagy-related protein 18 D PAS_chr3_1016 Phosphoinositide binding protein K17908 WIPI1_2; autophagy-related protein 18 D PAS_chr2-1_0211 Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II K08334 BECN; beclin D PAS_chr4_0478 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137] D PAS_chr3_0042 Myristoylated serine/threonine protein kinase involved in vacuolar protein sorting K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1] D PAS_chr3_0363 Conserved ubiquitin-like modifier K08336 ATG12; ubiquitin-like protein ATG12 D PAS_chr4_0459 Conserved protein involved in autophagy and the Cvt pathway K08339 ATG5; autophagy-related protein 5 D PAS_chr1-4_0310 Autophagy-related protein K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7 D PAS_chr3_0688 E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3 D PAS_chr4_0704 Conserved protein that is a component of autophagosomes and Cvt vesicles K08341 GABARAP; GABA(A) receptor-associated protein D PAS_chr1-4_0522 Conserved cysteine protease required for autophagy K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-] C 04137 Mitophagy - animal C 04139 Mitophagy - yeast [PATH:ppa04139] D PAS_chr2-1_0557 PIK-related protein kinase and rapamycin target K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] D PAS_chr1-4_0614 Core Sm protein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 D PAS_chr3_0245 Component of the Sin3p-Rpd3p histone deacetylase complex K11644 SIN3A; paired amphipathic helix protein Sin3a D PAS_chr4_0889 hypothetical protein K08955 YME1; ATP-dependent metalloprotease [EC:3.4.24.-] D PAS_chr3_0673 Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway K11244 WSC; cell wall integrity and stress response component D PAS_chr1-4_0415 hypothetical protein K11244 WSC; cell wall integrity and stress response component D PAS_chr1-4_0416 hypothetical protein K11244 WSC; cell wall integrity and stress response component D PAS_chr2-1_0124 Elongation factor 2 (EF-2), also encoded by EFT1 K02677 PRKCA; classical protein kinase C alpha type [EC:2.7.11.13] D PAS_chr3_0220 Mitogen-activated protein (MAP) kinase kinase kinase K11229 BCK1; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25] D PAS_chr1-4_0271 Mitogen-activated kinase kinase involved in protein kinase C signaling pathway K08294 MKK1_2; mitogen-activated protein kinase kinase [EC:2.7.12.2] D PAS_chr4_0315 Histidine kinase osmosensor that regulates a MAP kinase cascade K11231 SLN1; osomolarity two-component system, sensor histidine kinase SLN1 [EC:2.7.13.3] D PAS_chr3_0849 Cytoplasmic response regulator, part of a two-component signal transducer that mediates osmosensing K11233 SSK1; osomolarity two-component system, response regulator SSK1 D PAS_chr1-1_0105 MAP kinase kinase that plays a pivotal role in the osmosensing signal-transduction pathway K11227 PBS2; mitogen-activated protein kinase kinase [EC:2.7.12.2] D PAS_chr1-3_0232 Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors K04441 P38; p38 MAP kinase [EC:2.7.11.24] D PAS_chr1-4_0262 Alpha' catalytic subunit of casein kinase 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PAS_chr3_0549 Alpha' catalytic subunit of casein kinase 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PAS_chr4_0402 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_chr2-2_0247 Beta' regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_chr2-1_0169 Mitochondrial outer membrane protein involved in membrane fission, required for localization of Dnm1 K17969 FIS1; mitochondrial fission 1 protein D PAS_chr3_0751 Dynamin-related GTPase K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5] D PAS_chr1-4_0555 Adapter protein for pexophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08330 ATG11; autophagy-related protein 11 D PAS_chr1-4_0499 hypothetical protein K17775 MDM34; mitochondrial distribution and morphology protein 34 D PAS_chr1-1_0247 Subunit of both the Mdm10-Mdm12-Mmm1 complex and the mitochondrial sorting and assembly machinery K17774 MDM10; mitochondrial distribution and morphology protein 10 D PAS_chr3_0263 Mitochondrial outer membrane protein K17765 MDM12; mitochondrial distribution and morphology protein 12 D PAS_chr4_0557 Mitochondrial outer membrane protein, component of the Mdm10-Mdm12-Mmm1 complex K17764 MMM1; maintenance of mitochondrial morphology protein 1 D PAS_chr4_0704 Conserved protein that is a component of autophagosomes and Cvt vesicles K08341 GABARAP; GABA(A) receptor-associated protein D PAS_chr2-1_0641 Protein serine/threonine kinase required for vesicle formation in autophagy K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1] D PAS_chr1-1_0431 hypothetical protein K19717 ATG33; autophagy-related protein 33 D PAS_chr1-1_0279 Mitochondrial protein phosphatase of type 2C with similarity to mammalian PP1Ks K19708 PTC6; protein phosphatase PTC6 [EC:3.1.3.16 3.1.3.43] D PAS_chr1-1_0457 Phosphatidylinositol-4-phosphate 5-kinase K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68] D PAS_chr4_0804 hypothetical protein K18191 FMC1; ATP synthase assembly factor FMC1, mitochondrial D PAS_chr3_0703 DNA polymerase gamma K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7] D PAS_chr4_0998 hypothetical protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial D PAS_chr2-1_0480 Mitochondrial inner membrane protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial D PAS_chr1-4_0585 Ubiquitin-specific protease that interacts with Bre5p K11841 USP10; ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12] C 04148 Efferocytosis [PATH:ppa04148] D PAS_chr3_0399 Minor sphingoid long-chain base kinase K04718 SPHK; sphingosine kinase [EC:2.7.1.91] D PAS_chr4_0530 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr2-1_0872 hypothetical protein K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr1-3_0232 Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors K04441 P38; p38 MAP kinase [EC:2.7.11.24] D PAS_chr2-1_0562 Protein phosphatase with specificity for serine, threonine, and tyrosine residues K04459 DUSP; dual specificity MAP kinase phosphatase [EC:3.1.3.16 3.1.3.48] D PAS_chr4_0662 Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PAS_chr3_1062 Membrane protein of the plasma membrane and ER K26935 TMEM30A; cell cycle control protein 50A D PAS_chr4_0430 Endosomal protein that regulates cell polarity, controls polarized growth K26935 TMEM30A; cell cycle control protein 50A D PAS_chr1-3_0113 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04392 RAC1; Ras-related C3 botulinum toxin substrate 1 D PAS_chr1-4_0162 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5 K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0219 GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr3_1175 hypothetical protein K20177 VPS3; vacuolar protein sorting-associated protein 3 D PAS_chr1-4_0606 Membrane-associated protein K20178 VPS8; vacuolar protein sorting-associated protein 8 D PAS_chr1-3_0306 hypothetical protein K20179 VPS11; vacuolar protein sorting-associated protein 11 D PAS_chr3_0210 Subunit of the vacuole fusion and protein sorting HOPS complex and the CORVET tethering complex K20180 VPS16; vacuolar protein sorting-associated protein 16 D PAS_chr2-1_0574 Component of CORVET tethering complex K20181 VPS18; vacuolar protein sorting-associated protein 18 D PAS_chr2-2_0264 ATP-binding protein that is A subunit of the HOPS complex and the CORVET tethering complex K20182 VPS33A; vacuolar protein sorting-associated protein 33A D PAS_chr1-1_0460 hypothetical protein K20183 VPS39; Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 D PAS_chr4_0062 Vacuolar membrane protein K20184 VPS41; vacuolar protein sorting-associated protein 41 D PAS_chr4_0899 GTP-binding protein K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr2-1_0669 GTPase K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr4_0372 Putative protein of unknown function K23678 PQLC2; solute carrier family 66 (lysosomal lysine-arginine transporter), member 1 D PAS_chr1-1_0231 hypothetical protein K23678 PQLC2; solute carrier family 66 (lysosomal lysine-arginine transporter), member 1 D PAS_chr4_0092 Putative protein of unknown function K23678 PQLC2; solute carrier family 66 (lysosomal lysine-arginine transporter), member 1 D PAS_chr4_0684 Arginase, responsible for arginine degradation K01476 rocF; arginase [EC:3.5.3.1] D PAS_chr2-2_0288 Arginase, responsible for arginine degradation K01476 rocF; arginase [EC:3.5.3.1] D PAS_chr3_0417 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PAS_chr2-1_0850 hypothetical protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D PAS_chr3_0252 Steryl ester hydrolase K01052 LIPA; lysosomal acid lipase/cholesteryl ester hydrolase [EC:3.1.1.13] D PAS_chr1-1_0070 Steryl ester hydrolase, one of three gene products (Yeh1p, Yeh2p, Tgl1p) K01052 LIPA; lysosomal acid lipase/cholesteryl ester hydrolase [EC:3.1.1.13] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast [PATH:ppa04111] D PAS_chr1-4_0054 G1 cyclin involved in cell cycle progression K06646 CLN3; G1/S-specific cyclin CLN3 D PAS_chr4_0950 hypothetical protein K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22] D PAS_chr1-3_0098 DNA binding component of the SBF complex (Swi4p-Swi6p), a transcriptional activator K06649 SWI4; regulatory protein SWI4 D PAS_chr4_0634 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p K06648 SWI6; regulatory protein SWI6 D PAS_FragB_0046 G1/S-specific cyclin K06650 CLN2; G1/S-specific cyclin CLN2 D PAS_chr2-1_0508 Transcription factor involved in regulation of cell cycle progression from G1 to S phase K06647 MBP1; transcription factor MBP1 D PAS_chr3_0599 Essential ATP-binding protein required for DNA replication, component of the pre-replicative complex K02213 CDC6; cell division control protein 6 D PAS_chr4_0526 Largest subunit of the origin recognition complex K02603 ORC1; origin recognition complex subunit 1 D PAS_chr3_0941 Subunit of the origin recognition complex, which directs DNA replication K02604 ORC2; origin recognition complex subunit 2 D PAS_chr2-1_0570 Subunit of the origin recognition complex K02606 ORC4; origin recognition complex subunit 4 D PAS_chr1-3_0084 Subunit of the origin recognition complex K02607 ORC5; origin recognition complex subunit 5 D PAS_chr3_1239 hypothetical protein K02608 ORC6; origin recognition complex subunit 6 D PAS_chr4_0223 Protein involved in DNA replication K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3] D PAS_chr2-1_0149 Protein involved in DNA replication K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3] D PAS_chr1-4_0142 Essential helicase component of heterohexameric MCM2-7 complexes K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3] D PAS_chr2-2_0339 Component of the hexameric MCM complex K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3] D PAS_chr1-4_0360 Protein involved in DNA replication K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3] D PAS_chr4_0891 DNA replication licensing factor K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3] D PAS_chr1-4_0192 DDK (Dbf4-dependent kinase) catalytic subunit K02214 CDC7; cell division control protein 7 [EC:2.7.11.1] D PAS_chr1-3_0050 Regulatory subunit of Cdc7p-Dbf4p kinase complex K02309 DBF4; regulatory subunit for Cdc7p protein kinase D PAS_chr1-1_0376 DNA replication initiation factor K06628 CDC45; cell division control protein 45 D PAS_chr3_0968 Transcription factor involved in cell-type-specific transcription and pheromone response K12412 MCM1; pheromone receptor transcription factor D PAS_chr2-1_0784 Homeodomain-containing transcriptional repressor K12411 YOX1; homeobox protein YOX1/YHP1 D PAS_chr4_0530 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr2-1_0872 hypothetical protein K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr1-3_0307 hypothetical protein K06652 FAR1; cyclin-dependent kinase inhibitor FAR1 D PAS_chr1-4_0020 Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03348 APC1; anaphase-promoting complex subunit 1 D PAS_chr2-1_0604 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03349 APC2; anaphase-promoting complex subunit 2 D PAS_chr1-3_0148 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03350 APC3; anaphase-promoting complex subunit 3 D PAS_chr3_0477 hypothetical protein K03351 APC4; anaphase-promoting complex subunit 4 D PAS_chr1-4_0197 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03353 APC6; anaphase-promoting complex subunit 6 D PAS_chr3_1078 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03355 APC8; anaphase-promoting complex subunit 8 D PAS_chr3_1218 hypothetical protein K03357 APC10; anaphase-promoting complex subunit 10 D PAS_chr3_0293 Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03358 APC11; anaphase-promoting complex subunit 11 D PAS_chr3_1258 hypothetical protein K03094 SKP1; S-phase kinase-associated protein 1 D PAS_chr1-1_0312 Cullin, structural protein of SCF complexes, involved in ubiquination K03347 CUL1; cullin 1 D PAS_chr4_0436 RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF) K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] D PAS_chr4_0769 F-box protein component of the SCF ubiquitin-ligase complex K03360 GRR1; F-box and leucine-rich repeat protein GRR1 D PAS_chr2-1_0666 F-box protein required for G1/S and G2/M transition K03361 CDC4; F-box and WD-40 domain protein CDC4 D PAS_chr2-1_0092 Pho85 cyclin of the Pcl1,2-like subfamily, involved in entry into the mitotic cell cycle and regulat K06656 PCL1; PHO85 cyclin-1 D PAS_FragD_0025 G1 cyclin, associates with Pho85p cyclin-dependent kinase (Cdk) K06657 PCL2_9; PHO85 cyclin-2/9 D PAS_chr3_0214 Cyclin-dependent kinase K06655 PHO85; negative regulator of the PHO system [EC:2.7.11.22] D PAS_c121_0015 hypothetical protein K06653 PHO81; CDK inhibitor PHO81 D PAS_chr2-2_0043 Homeobox transcription factor K02646 PHO2; regulatory protein PHO2 D PAS_chr4_0604 B-type cyclin involved in cell cycle progression K06659 CLB3_4; G2/mitotic-specific cyclin 3/4 D PAS_chr3_0459 Dual-specificity kinase K08866 TTK; serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1] D PAS_chr2-1_0416 Protein kinase that forms a complex with Mad1p and Bub3p K02178 BUB1; checkpoint serine/threonine-protein kinase [EC:2.7.11.1] D PAS_chr2-1_0515 Kinetochore checkpoint WD40 repeat protein K02180 BUB3; cell cycle arrest protein BUB3 D PAS_chr4_0129 hypothetical protein K02307 DAM1; DASH complex subunit DAM1 D PAS_chr4_0585 Serine/threonine kinase and DNA damage checkpoint effector K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D PAS_chr1-4_0541 Separase, a caspase-like cysteine proteas K02365 ESP1; separase [EC:3.4.22.49] D PAS_chr2-1_0831 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr4_0494 Regulatory subunit A of the heterotrimeric protein phosphatase 2A K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A D PAS_chr3_0243 Polo-like kinase with similarity to Xenopus Plx1 and S. pombe Plo1p K06660 CDC5; cell cycle serine/threonine-protein kinase CDC5/MSD2 [EC:2.7.11.21] D PAS_chr1-3_0065 Mitotic exit network regulator, forms GTPase-activating Bfa1p-Bub2p complex K02179 BUB2; cell cycle arrest protein BUB2 D PAS_chr3_0758 Putative GDP/GTP exchange factor required for mitotic exit at low temperatures K06681 LTE1; Gdp/GTP exchange factor required for growth at low temperatures D PAS_chr4_0525 GTP-binding protein of the ras superfamily involved in termination of M-phase K06682 TEM1; Gtp-binding protein of the ras superfamily involved in termination of M-phase D PAS_chr3_1061 Protein kinase of the Mitotic Exit Network K06683 CDC15; cell division control protein CDC15 [EC:2.7.11.1] D PAS_chr3_0752 Ser/Thr kinase involved in transcription and stress response K06684 DBF2; cell cycle protein kinase DBF2 [EC:2.7.11.-] D PAS_chr1-4_0419 Component of the mitotic exit network K06685 MOB1; MOB kinase activator 1 D PAS_chr1-4_0081 Protein phosphatase required for mitotic exit K06639 CDC14; cell division cycle 14 [EC:3.1.3.16 3.1.3.48] D PAS_chr2-2_0495 hypothetical protein K03364 CDH1; cell division cycle 20-like protein 1, cofactor of APC complex D PAS_chr2-1_0102 B-type cyclin involved in cell cycle progression K23469 CLB2; G2/mitotic-specific cyclin 2 D PAS_chr1-1_0273 Protein tyrosine phosphatase involved in cell cycle control K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D PAS_chr1-4_0363 Cyclin-dependent kinase-activating kinase required for passage through the cell cycle K06667 CAK1; serine/threonine-protein kinase CAK1 [EC:2.7.11.22] D PAS_chr2-2_0298 Cyclin-dependent protein kinase regulatory subunit and adaptor K02219 CKS1; cyclin-dependent kinase regulatory subunit CKS1 D PAS_chr3_0624 Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D PAS_chr3_0594 F-box protein containing five copies of the WD40 motif, controls cell cycle function K10259 MET30; F-box and WD-40 domain protein MET30 D PAS_chr2-2_0491 hypothetical protein K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320] D PAS_chr1-1_0340 Protein kinase involved in bud growth and assembly of the septin ring K06668 GIN4; serine/threonine-protein kinase GIN4 [EC:2.7.11.-] D PAS_chr3_0565 hypothetical protein K02544 MEC3; G2-specific checkpoint protein D PAS_FragB_0028 hypothetical protein K06663 DDC1; DNA damage checkpoint protein D PAS_chr3_0587 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] D PAS_chr2-1_0061 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints K06662 HRAD17; cell cycle checkpoint protein D PAS_chr2-2_0297 Genome integrity checkpoint protein and PI kinase superfamily member K02543 MEC1; cell cycle checkpoint protein MEC1 D PAS_chr1-1_0336 hypothetical protein K12578 LCD1; DNA damage checkpoint protein LCD1 D PAS_chr3_0395 hypothetical protein K06661 RAD9; DNA repair protein RAD9 D PAS_chr1-1_0329 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1 D PAS_chr3_1254 hypothetical protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D PAS_chr2-2_0040 Cell-cycle checkpoint serine-threonine kinase K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1] D PAS_chr2-2_0153 Major transcriptional repressor of DNA-damage-regulated genes K09173 RFX1_2_3; regulatory factor X 1/2/3 D PAS_chr2-1_0762 General transcriptional co-repressor, acts together with Tup1p K06665 SSN6; general transcriptional corepressor CYC8 D PAS_chr3_1001 General repressor of transcription, forms complex with Cyc8p K06666 TUP1; general transcriptional corepressor TUP1 D PAS_chr2-1_0082 Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an K06636 SMC1; structural maintenance of chromosome 1 D PAS_chr2-2_0306 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells K06669 SMC3; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) D PAS_chr4_0641 Essential protein required for sister chromatid cohesion in mitosis and meiosis K06670 SCC1; cohesin complex subunit SCC1 D PAS_chr3_0540 Subunit of the cohesin complex K06671 STAG1_2; cohesin complex subunit SA-1/2 D PAS_chr3_1186 hypothetical protein K06672 SCC2; cohesin loading factor subunit SCC2 D PAS_chr4_0109 Component of the condensin complex, essential SMC chromosomal ATPase family member K06674 SMC2; structural maintenance of chromosome 2 D PAS_chr2-2_0416 Subunit of the condensin complex, which reorganizes chromosomes during cell division K06675 SMC4; structural maintenance of chromosome 4 D PAS_chr2-1_0367 Essential protein required for chromosome condensation K06676 BRRN1; condensin complex subunit 2 D PAS_chr3_0265 Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p) K06677 YCS4; condensin complex subunit 1 D PAS_chr2-1_0627 Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p) K06678 YCG1; condensin complex subunit 3 C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast [PATH:ppa04113] D PAS_chr2-1_0557 PIK-related protein kinase and rapamycin target K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] D PAS_chr1-4_0054 G1 cyclin involved in cell cycle progression K06646 CLN3; G1/S-specific cyclin CLN3 D PAS_chr4_0950 hypothetical protein K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22] D PAS_chr1-3_0098 DNA binding component of the SBF complex (Swi4p-Swi6p), a transcriptional activator K06649 SWI4; regulatory protein SWI4 D PAS_chr4_0634 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p K06648 SWI6; regulatory protein SWI6 D PAS_FragB_0046 G1/S-specific cyclin K06650 CLN2; G1/S-specific cyclin CLN2 D PAS_chr4_0878 Silenced copy of ALPHA2 at HML K09359 MATA2; mating-type protein A2 D PAS_chr1-1_0434 Zinc finger protein involved in control of meiosis K09235 RME1; zinc finger protein RME1 D PAS_chr1-4_0570 High-affinity glucose transporter of the major facilitator superfamily K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D PAS_chr1-1_0300 Plasma membrane glucose sensor that regulates glucose transport K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D PAS_chr2-1_0054 Putative hexose transporter, expressed at low levels and expression is repressed by glucose K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D PAS_chr2-1_0855 hypothetical protein K12761 SNF1; carbon catabolite-derepressing protein kinase [EC:2.7.11.1] D PAS_chr2-1_0078 Plasma membrane G protein coupled receptor (GPCR) that interacts with the heterotrimeric G protein A K12762 GPR1; G protein-coupled receptor GPR1 D PAS_chr4_0680 GTP-binding protein K07827 KRAS; GTPase KRas D PAS_chr3_0133 GTP-binding protein of the ras superfamily required for bud site selection K07827 KRAS; GTPase KRas D PAS_chr4_0356 Adenylate cyclase, required for cAMP production and cAMP-dependent protein kinase signaling K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D PAS_chr1-4_0357 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr3_0964 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr1-4_0530 hypothetical protein K12763 EFG1; enhanced filamentous growth protein 1 D PAS_chr4_0326 Transcriptional activator that enhances pseudohyphal growth K12763 EFG1; enhanced filamentous growth protein 1 D PAS_chr1-3_0041 serine/threonine protein kinase K12765 IME2; meiosis induction protein kinase IME2/SME1 [EC:2.7.11.1] D PAS_chr3_0599 Essential ATP-binding protein required for DNA replication, component of the pre-replicative complex K02213 CDC6; cell division control protein 6 D PAS_chr4_0526 Largest subunit of the origin recognition complex K02603 ORC1; origin recognition complex subunit 1 D PAS_chr3_0941 Subunit of the origin recognition complex, which directs DNA replication K02604 ORC2; origin recognition complex subunit 2 D PAS_chr2-1_0570 Subunit of the origin recognition complex K02606 ORC4; origin recognition complex subunit 4 D PAS_chr1-3_0084 Subunit of the origin recognition complex K02607 ORC5; origin recognition complex subunit 5 D PAS_chr3_1239 hypothetical protein K02608 ORC6; origin recognition complex subunit 6 D PAS_chr4_0223 Protein involved in DNA replication K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3] D PAS_chr2-1_0149 Protein involved in DNA replication K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3] D PAS_chr1-4_0142 Essential helicase component of heterohexameric MCM2-7 complexes K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3] D PAS_chr2-2_0339 Component of the hexameric MCM complex K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3] D PAS_chr1-4_0360 Protein involved in DNA replication K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3] D PAS_chr4_0891 DNA replication licensing factor K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3] D PAS_chr1-1_0376 DNA replication initiation factor K06628 CDC45; cell division control protein 45 D PAS_chr1-4_0192 DDK (Dbf4-dependent kinase) catalytic subunit K02214 CDC7; cell division control protein 7 [EC:2.7.11.1] D PAS_chr1-3_0050 Regulatory subunit of Cdc7p-Dbf4p kinase complex K02309 DBF4; regulatory subunit for Cdc7p protein kinase D PAS_chr3_0148 Glucose-repressible protein kinase involved in signal transduction during cell proliferation in resp K12767 RIM15; serine/threonine-protein kinase RIM15 [EC:2.7.11.36] D PAS_chr1-4_0179 Meiosis-specific protein that initiates meiotic recombination K10878 SPO11; meiotic recombination protein SPO11 D PAS_chr2-2_0362 Meiosis-specific transcription factor K12769 NDT80; meiosis-specific transcription factor NDT80 D PAS_chr1-1_0365 Putative protein serine/threonine kinase expressed at the end of meiosis K12771 SPS1; sporulation-specific protein 1 [EC:2.7.11.1] D PAS_FragD_0011 Sporulation-specific homolog of the yeast CDC3/10/11/12 family of bud neck microfilament genes K12773 SPR3; sporulation-regulated protein 3 D PAS_chr4_0604 B-type cyclin involved in cell cycle progression K06659 CLB3_4; G2/mitotic-specific cyclin 3/4 D PAS_chr3_0243 Polo-like kinase with similarity to Xenopus Plx1 and S. pombe Plo1p K06660 CDC5; cell cycle serine/threonine-protein kinase CDC5/MSD2 [EC:2.7.11.21] D PAS_chr1-4_0081 Protein phosphatase required for mitotic exit K06639 CDC14; cell division cycle 14 [EC:3.1.3.16 3.1.3.48] D PAS_chr2-1_0635 Catalytic subunit of type 1 serine/threonine protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr2-1_0407 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr1-1_0153 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr3_0624 Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D PAS_chr3_0565 hypothetical protein K02544 MEC3; G2-specific checkpoint protein D PAS_FragB_0028 hypothetical protein K06663 DDC1; DNA damage checkpoint protein D PAS_chr3_0587 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] D PAS_chr2-1_0061 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints K06662 HRAD17; cell cycle checkpoint protein D PAS_chr2-2_0297 Genome integrity checkpoint protein and PI kinase superfamily member K02543 MEC1; cell cycle checkpoint protein MEC1 D PAS_chr3_0395 hypothetical protein K06661 RAD9; DNA repair protein RAD9 D PAS_chr3_1254 hypothetical protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D PAS_chr4_0585 Serine/threonine kinase and DNA damage checkpoint effector K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D PAS_chr1-4_0541 Separase, a caspase-like cysteine proteas K02365 ESP1; separase [EC:3.4.22.49] D PAS_chr2-1_0082 Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an K06636 SMC1; structural maintenance of chromosome 1 D PAS_chr2-2_0306 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells K06669 SMC3; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) D PAS_chr3_1166 hypothetical protein K12780 REC8; meiotic recombination protein REC8, fungi type D PAS_chr3_0540 Subunit of the cohesin complex K06671 STAG1_2; cohesin complex subunit SA-1/2 D PAS_chr1-4_0020 Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03348 APC1; anaphase-promoting complex subunit 1 D PAS_chr2-1_0604 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03349 APC2; anaphase-promoting complex subunit 2 D PAS_chr1-3_0148 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03350 APC3; anaphase-promoting complex subunit 3 D PAS_chr3_0477 hypothetical protein K03351 APC4; anaphase-promoting complex subunit 4 D PAS_chr1-4_0197 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03353 APC6; anaphase-promoting complex subunit 6 D PAS_chr3_1078 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03355 APC8; anaphase-promoting complex subunit 8 D PAS_chr3_1218 hypothetical protein K03357 APC10; anaphase-promoting complex subunit 10 D PAS_chr3_0293 Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03358 APC11; anaphase-promoting complex subunit 11 D PAS_chr2-1_0416 Protein kinase that forms a complex with Mad1p and Bub3p K02178 BUB1; checkpoint serine/threonine-protein kinase [EC:2.7.11.1] D PAS_chr2-2_0274 B-type regulatory subunit of protein phosphatase 2A (PP2A) K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr4_0494 Regulatory subunit A of the heterotrimeric protein phosphatase 2A K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A D PAS_chr1-4_0473 Meiosis-specific APC/C activator protein AMA1 K12782 AMA1; meiosis-specific APC/C activator protein AMA1 D PAS_chr3_1061 Protein kinase of the Mitotic Exit Network K06683 CDC15; cell division control protein CDC15 [EC:2.7.11.1] C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins [PATH:ppa04814] D PAS_chr1-4_0443 hypothetical protein K10415 DYNC1I; dynein cytoplasmic 1 intermediate chain D PAS_chr3_1140 Cytoplasmic light chain dynein, microtubule motor protein K10418 DYNLL; dynein light chain LC8-type D PAS_chr4_0389 Large subunit of the dynactin complex K04648 DCTN1; dynactin 1 D PAS_chr3_1019 hypothetical protein K10426 DCTN4; dynactin 4 D PAS_chr1-1_0263 Actin-related protein of the dynactin complex K16575 ACTR1; centractin D PAS_c131_0006 hypothetical protein K10364 CAPZA; F-actin-capping protein subunit alpha D PAS_chr3_0548 Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) K10365 CAPZB; F-actin-capping protein subunit beta D PAS_chr2-1_0186 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0623 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0533 Beta-tubulin K07375 TUBB; tubulin beta D PAS_chr4_0148 Gamma-tubulin K10389 TUBG; tubulin gamma D PAS_chr4_0160 Kinesin-related motor protein required for mitotic spindle assembly and chromosome segregation K10398 KIF11; kinesin family member 11 D PAS_chr4_0091 Kinesin-related motor protein involved in mitotic spindle positioning K11498 CENPE; centromeric protein E D PAS_chr1-4_0497 Kinesin-related motor protein involved in mitotic spindle positioning K10401 KIF18A; kinesin family member 18A D PAS_chr4_0900 Kinesin-like protein K10405 KIFC1; kinesin family member C1 D PAS_chr4_0618 One of two type I myosins K10356 MYO1; myosin I D PAS_FragB_0012 Myosin-2 K10357 MYO5; myosin V D PAS_chr3_0823 Type II myosin heavy chain, required for wild-type cytokinesis and cell separation K10352 MYH9s; myosin heavy chain 9/10/11/14 D PAS_chr3_1169 hypothetical protein K10355 ACTF; actin, other eukaryote D PAS_chr4_0115 Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments K17945 TPM1_2; tropomyosin, fungi type C 04820 Cytoskeleton in muscle cells [PATH:ppa04820] D PAS_chr3_0823 Type II myosin heavy chain, required for wild-type cytokinesis and cell separation K10352 MYH9s; myosin heavy chain 9/10/11/14 D PAS_c131_0006 hypothetical protein K10364 CAPZA; F-actin-capping protein subunit alpha D PAS_chr3_0548 Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) K10365 CAPZB; F-actin-capping protein subunit beta D PAS_chr3_0082 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAS_c121_0009 hypothetical protein K01490 AMPD; AMP deaminase [EC:3.5.4.6] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species [PATH:ppa04213] D PAS_chr4_0680 GTP-binding protein K07827 KRAS; GTPase KRas D PAS_chr3_0133 GTP-binding protein of the ras superfamily required for bud site selection K07827 KRAS; GTPase KRas D PAS_chr1-4_0357 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr3_0964 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr2-1_0230 Mitochondrial ribosomal protein of the small subunit K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] D PAS_chr4_0788 Mitochondrial ribosomal protein of the small subunit K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] D PAS_chr1-4_0071 Mitochondrial superoxide dismutase, protects cells against oxygen toxicity K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] D PAS_chr2-2_0131 Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1 K03781 katE; catalase [EC:1.11.1.6] D PAS_chr4_0459 Conserved protein involved in autophagy and the Cvt pathway K08339 ATG5; autophagy-related protein 5 D PAS_chr1-4_0498 One of three possible beta-subunits of the Snf1 kinase complex K07199 PRKAB; 5'-AMP-activated protein kinase, regulatory beta subunit D PAS_chr2-1_0608 Activating gamma subunit of the AMP-activated Snf1p kinase complex K07200 PRKAG; 5'-AMP-activated protein kinase, regulatory gamma subunit D PAS_chr2-1_0557 PIK-related protein kinase and rapamycin target K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] D PAS_chr2-1_0459 Subunit of TORC1, a rapamycin-sensitive complex involved in growth control K07204 RAPTOR; regulatory associated protein of mTOR D PAS_chr4_0786 Cytosolic superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr1-4_0125 Histone deacetylase K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] D PAS_chr2-1_0078 Plasma membrane G protein coupled receptor (GPCR) that interacts with the heterotrimeric G protein A K12762 GPR1; G protein-coupled receptor GPR1 D PAS_chr4_0356 Adenylate cyclase, required for cAMP production and cAMP-dependent protein kinase signaling K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D PAS_chr3_0148 Glucose-repressible protein kinase involved in signal transduction during cell proliferation in resp K12767 RIM15; serine/threonine-protein kinase RIM15 [EC:2.7.11.36] D PAS_chr3_0893 Protein kinase involved in transcriptional activation of osmostress-responsive genes K19800 SCH9; serine/threonine protein kinase SCH9 [EC:2.7.11.1] D PAS_chr1-3_0102 Heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PAS_chr2-1_0324 Oligomeric mitochondrial matrix chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PAS_chr3_0361 Nicotinamidase K01440 PNC1; nicotinamidase [EC:3.5.1.19] D PAS_chr1-1_0374 Conserved NAD+ dependent histone deacetylase of the Sirtuin family K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr1-4_0315 Member of silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr4_0474 Member of the Sir2 family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr2-1_0513 Member of the Sir2 family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ppa01000] C 01001 Protein kinases [BR:ppa01001] D PAS_chr1-4_0357 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr3_0964 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr2-1_0124 Elongation factor 2 (EF-2), also encoded by EFT1 K02677 PRKCA; classical protein kinase C alpha type [EC:2.7.11.13] D PAS_chr1-4_0662 hypothetical protein K08850 AURKX; aurora kinase, other [EC:2.7.11.1] D PAS_chr1-4_0069 Protein kinase with similarity to mammalian phosphoinositide-dependent kinase 1 (PDK1) K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1] D PAS_chr3_0893 Protein kinase involved in transcriptional activation of osmostress-responsive genes K19800 SCH9; serine/threonine protein kinase SCH9 [EC:2.7.11.1] D PAS_chr3_0127 Protein kinase with similarityto serine/threonine protein kinase Ypk1p K13303 SGK2; serum/glucocorticoid-regulated kinase 2 [EC:2.7.11.1] D PAS_chr2-1_0071 Putative protein kinase, possible substrate of cAMP-dependent protein kinase (PKA) K22008 PSK1; serine/threonine-protein kinase Psk1 [EC:2.7.11.1] D PAS_chr3_0148 Glucose-repressible protein kinase involved in signal transduction during cell proliferation in resp K12767 RIM15; serine/threonine-protein kinase RIM15 [EC:2.7.11.36] D PAS_chr1-4_0302 Calmodulin-dependent protein kinase K08794 CAMK1; calcium/calmodulin-dependent protein kinase I [EC:2.7.11.17] D PAS_chr4_0585 Serine/threonine kinase and DNA damage checkpoint effector K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D PAS_chr2-1_0855 hypothetical protein K12761 SNF1; carbon catabolite-derepressing protein kinase [EC:2.7.11.1] D PAS_chr1-1_0340 Protein kinase involved in bud growth and assembly of the septin ring K06668 GIN4; serine/threonine-protein kinase GIN4 [EC:2.7.11.-] D PAS_chr3_0347 Serine/threonine protein kinase involved in regulation of exocytosis K19852 KIN1_2; serine/threonine protein kinase KIN1/2 [EC:2.7.11.1] D PAS_chr2-2_0040 Cell-cycle checkpoint serine-threonine kinase K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1] D PAS_chr4_0037 Protein kinase involved in the response to oxidative and osmotic stress K23785 RCK2; serine/threonine-protein kinase RCK2 [EC:2.7.11.1] D PAS_chr2-1_0357 Palmitoylated, plasma membrane-bound casein kinase I isoform K02218 CSNK1; casein kinase 1 [EC:2.7.11.1] D PAS_chr4_0568 Palmitoylated, plasma membrane-bound casein kinase I isoform K02218 CSNK1; casein kinase 1 [EC:2.7.11.1] D PAS_chr2-1_0219 Protein kinase involved in regulating diverse events including vesicular trafficking, DNA repair, an K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D PAS_chr2-2_0041 Serine/threonine protein kinase, subunit of the transcription factor TFIIH K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] D PAS_chr1-4_0305 Cyclin-dependent protein kinase, component of RNA polymerase II holoenzyme K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] D PAS_chr3_0375 Cyclin (Bur2p)-dependent protein kinase that functions in transcriptional regulation K15562 BUR1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23] D PAS_chr2-1_0468 Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates the C-termina K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23] D PAS_chr4_0530 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr2-1_0872 hypothetical protein K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr1-3_0232 Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors K04441 P38; p38 MAP kinase [EC:2.7.11.24] D PAS_chr3_0041 Middle sporulation-specific mitogen-activated protein kinase (MAPK) required for production of the O K08293 SMK1; sporulation-specific mitogen-activated protein kinase SMK1 [EC:2.7.11.24] D PAS_chr1-4_0368 Protein kinase required for signal transduction during entry into meiosis K03083 GSK3B; glycogen synthase kinase 3 beta [EC:2.7.11.26] D PAS_chr2-2_0103 Serine-threonine protein kinase that is part of a glucose-sensing system K18670 YAK1; dual specificity protein kinase YAK1 [EC:2.7.12.1] D PAS_chr3_0873 Serine-threonine protein kinase that is part of a glucose-sensing system K18670 YAK1; dual specificity protein kinase YAK1 [EC:2.7.12.1] D PAS_chr1-3_0041 serine/threonine protein kinase K12765 IME2; meiosis induction protein kinase IME2/SME1 [EC:2.7.11.1] D PAS_chr1-4_0271 Mitogen-activated kinase kinase involved in protein kinase C signaling pathway K08294 MKK1_2; mitogen-activated protein kinase kinase [EC:2.7.12.2] D PAS_chr1-4_0008 MAP kinase K11226 STE7; mitogen-activated protein kinase kinase [EC:2.7.12.2] D PAS_chr1-1_0105 MAP kinase kinase that plays a pivotal role in the osmosensing signal-transduction pathway K11227 PBS2; mitogen-activated protein kinase kinase [EC:2.7.12.2] D PAS_c131_0004 hypothetical protein K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1] D PAS_chr4_0313 Member of the PAK family of serine/threonine protein kinases with similarity to Ste20p and Cla4p K19833 CLA4; serine/threonine-protein kinase CLA4 [EC:2.7.11.1] D PAS_chr1-1_0057 Putative protein serine/threonine kinase expressed at the end of meiosis K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1] D PAS_chr1-1_0365 Putative protein serine/threonine kinase expressed at the end of meiosis K12771 SPS1; sporulation-specific protein 1 [EC:2.7.11.1] D PAS_chr3_0469 signal transducing MEK kinase K11228 STE11; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25] D PAS_chr3_0220 Mitogen-activated protein (MAP) kinase kinase kinase K11229 BCK1; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25] D PAS_chr1-4_0279 MAP kinase kinase kinase of the HOG1 mitogen-activated signaling pathway K11230 SSK2; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25] D PAS_chr2-1_0416 Protein kinase that forms a complex with Mad1p and Bub3p K02178 BUB1; checkpoint serine/threonine-protein kinase [EC:2.7.11.1] D PAS_chr2-1_0347 Protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D PAS_chr1-4_0192 DDK (Dbf4-dependent kinase) catalytic subunit K02214 CDC7; cell division control protein 7 [EC:2.7.11.1] D PAS_chr1-4_0262 Alpha' catalytic subunit of casein kinase 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PAS_chr3_0549 Alpha' catalytic subunit of casein kinase 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PAS_chr4_0404 Protein kinase K16315 GSG2; serine/threonine-protein kinase haspin [EC:2.7.11.1] D PAS_chr3_1104 Serine-threonine kinase and endoribonuclease K08852 ERN1; serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-] D PAS_chr2-1_0460 Protein serine/threonine kinase K08853 AAK; AP2-associated kinase [EC:2.7.11.1] D PAS_chr2-1_0689 Putative protein kinase that exhibits Akr1p-dependent palmitoylation K08856 STK16; serine/threonine kinase 16 [EC:2.7.11.1] D PAS_chr1-4_0451 protein kinase K20872 NEK2; serine/threonine-protein kinase Nek2 [EC:2.7.11.1] D PAS_chr3_0850 Protein kinase, phosphorylates the alpha-subunit of translation initiation factor eIF2 (Sui2p) K16196 EIF2AK4; eukaryotic translation initiation factor 2-alpha kinase 4 [EC:2.7.11.1] D PAS_chr4_0200 Cytoplasmic component of the nuclear aminoacylation-dependent tRNA export pathway K08876 SCYL1; SCY1-like protein 1 D PAS_chr2-1_0028 Putative kinase, suppressor of GTPase mutant, similar to bovine rhodopsin kinase K17541 SCYL2; SCY1-like protein 2 D PAS_chr3_0459 Dual-specificity kinase K08866 TTK; serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1] D PAS_chr2-1_0641 Protein serine/threonine kinase required for vesicle formation in autophagy K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1] D PAS_chr3_0042 Myristoylated serine/threonine protein kinase involved in vacuolar protein sorting K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1] D PAS_chr2-2_0315 Putative protein of unknown function K08869 ADCK; aarF domain-containing kinase D PAS_chr3_1221 hypothetical protein K08869 ADCK; aarF domain-containing kinase D PAS_chr2-1_0581 Putative protein of unknown function K08869 ADCK; aarF domain-containing kinase D PAS_chr1-4_0692 hypothetical protein K08869 ADCK; aarF domain-containing kinase D PAS_chr1-1_0297 Mitochondrial protein kinase K12077 PDK1; pyruvate dehydrogenase kinase isoform 1 [EC:2.7.11.2] D PAS_chr1-1_0202 Subunit of the RNA polymerase II mediator complex K00898 PDK2_3_4; pyruvate dehydrogenase kinase 2/3/4 [EC:2.7.11.2] D PAS_chr3_0360 Mitochondrial protein kinase K00898 PDK2_3_4; pyruvate dehydrogenase kinase 2/3/4 [EC:2.7.11.2] D PAS_chr4_0756 Mitochondrial protein kinase K00898 PDK2_3_4; pyruvate dehydrogenase kinase 2/3/4 [EC:2.7.11.2] D PAS_chr1-3_0143 Protein kinase primarily involved in telomere length regulation K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D PAS_chr2-1_0557 PIK-related protein kinase and rapamycin target K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] D PAS_chr1-4_0571 Transcription-associated protein K08874 TRRAP; transformation/transcription domain-associated protein D PAS_chr3_0112 Essential serine kinase involved in cell cycle progression and processing of the 20S pre-rRNA into M K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PAS_chr4_0195 Essential serine kinase involved in the processing of the 20S pre-rRNA into mature 18S rRNA K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D PAS_chr2-1_0639 Upstream serine/threonine kinase for the SNF1 complex K21157 SAK1; SNF1-activating kinase 1 [EC:2.7.11.1] D PAS_chr4_0812 Protein serine/threonine/tyrosine (dual-specificity) kinase K22009 MCK1; protein kinase MCK1 D PAS_chr4_0315 Histidine kinase osmosensor that regulates a MAP kinase cascade K11231 SLN1; osomolarity two-component system, sensor histidine kinase SLN1 [EC:2.7.13.3] D PAS_chr2-1_0162 Histidine kinase osmosensor that regulates a MAP kinase cascade K19691 NIK1; osomolarity two-component system, sensor histidine kinase NIK1 [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ppa01009] D PAS_chr2-1_0635 Catalytic subunit of type 1 serine/threonine protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr2-1_0407 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr1-1_0153 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr2-1_0288 hypothetical protein K16833 PPP1R2; protein phosphatase inhibitor 2 D PAS_chr2-1_0601 Conserved nuclear regulatory subunit of Glc7p type 1 protein serine-threonine phosphatase (PP1) K17550 PPP1R7; protein phosphatase 1 regulatory subunit 7 D PAS_chr3_1203 hypothetical protein K17553 PPP1R11; protein phosphatase 1 regulatory subunit 11 D PAS_chr1-3_0198 hypothetical protein K17560 URI1; unconventional prefoldin RPB5 interactor 1 D PAS_chr4_0030 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D PAS_chr1-3_0085 hypothetical protein K13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2 D PAS_chr4_0091 Kinesin-related motor protein involved in mitotic spindle positioning K11498 CENPE; centromeric protein E D PAS_chr1-4_0135 Beta subunit of the translation initiation factor eIF2 K03238 EIF2S2; translation initiation factor 2 subunit 2 D PAS_chr1-4_0146 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 D PAS_chr2-1_0302 Putative catalytic subunit of a class II histone deacetylase complex K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] D PAS_chr3_0890 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PAS_chr2-2_0166 JmjC domain family histone demethylase K11446 KDM5; [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67] D PAS_chr1-1_0345 60S ribosomal protein L5 K02932 RP-L5e; large subunit ribosomal protein L5e D PAS_chr4_0891 DNA replication licensing factor K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3] D PAS_chr2-1_0861 hypothetical protein K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D PAS_chr4_0618 One of two type I myosins K10356 MYO1; myosin I D PAS_chr1-4_0451 protein kinase K20872 NEK2; serine/threonine-protein kinase Nek2 [EC:2.7.11.1] D PAS_chr4_0269 Essential nuclear protein with a possible role in the osmoregulatory glycerol response K17583 NOM1; nucleolar MIF4G domain-containing protein 1 D PAS_chr1-3_0084 Subunit of the origin recognition complex K02607 ORC5; origin recognition complex subunit 5 D PAS_chr2-1_0402 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-4_0047 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-1_0022 Essential conserved nucleolar protein necessary for biogenesis of 60S ribosomal subunits K14849 RRP1; ribosomal RNA-processing protein 1 D PAS_chr3_1159 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 D PAS_chr1-1_0314 Component of the GARP (Golgi-associated retrograde protein) complex K17600 VPS54; vacuolar protein sorting-associated protein 54 D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr4_0494 Regulatory subunit A of the heterotrimeric protein phosphatase 2A K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A D PAS_chr2-1_0831 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B D PAS_chr2-2_0274 B-type regulatory subunit of protein phosphatase 2A (PP2A) K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D PAS_chr2-2_0484 hypothetical protein K17605 PPP2R4; serine/threonine-protein phosphatase 2A activator D PAS_chr4_0085 Activator of the phosphotyrosyl phosphatase activity of PP2A,peptidyl-prolyl cis/trans-isomerase K17605 PPP2R4; serine/threonine-protein phosphatase 2A activator D PAS_chr1-4_0119 Essential protein involved in the TOR signaling pathway K17606 IGBP1; immunoglobulin-binding protein 1 D PAS_chr3_0339 Protein that interacts physically and genetically with Tap42p, which regulates protein phosphatase 2 K17607 TIPRL; type 2A phosphatase activator TIP41 D PAS_chr2-2_0234 Carboxyl methyltransferase K18203 LCMT1; [phosphatase 2A protein]-leucine-carboxy methyltransferase [EC:2.1.1.233] D PAS_chr3_0414 Calcineurin A K04348 PPP3C; serine/threonine-protein phosphatase 2B catalytic subunit [EC:3.1.3.16] D PAS_chr2-1_0595 Calcineurin B K06268 PPP3R; serine/threonine-protein phosphatase 2B regulatory subunit D PAS_chr2-1_0758 Calmodulin K02183 CALM; calmodulin D PAS_chr2-2_0435 hypothetical protein K02183 CALM; calmodulin D PAS_chr3_0608 Protein serine/threonine phosphatase with similarity to human phosphatase PP5 K04460 PPP5C; serine/threonine-protein phosphatase 5 [EC:3.1.3.16] D PAS_chr1-3_0148 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03350 APC3; anaphase-promoting complex subunit 3 D PAS_chr1-4_0197 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03353 APC6; anaphase-promoting complex subunit 6 D PAS_chr1-4_0130 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0217 Type 2A-related serine-threonine phosphatase K15427 SIT4; serine/threonine-protein phosphatase PP1-1 [EC:3.1.3.16] D PAS_chr1-4_0280 Putative serine/threonine protein phosphatase, required for glycogen accumulation K17615 PPG1; serine/threonine-protein phosphatase PPG1 [EC:3.1.3.16] D PAS_chr4_0986 hypothetical protein K19704 PTC1; protein phosphatase PTC1 [EC:3.1.3.16] D PAS_chr2-2_0216 Type 2C protein phosphatase K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D PAS_c131_0016 hypothetical protein K19705 PTC4; protein phosphatase PTC4 [EC:3.1.3.16] D PAS_chr1-1_0279 Mitochondrial protein phosphatase of type 2C with similarity to mammalian PP1Ks K19708 PTC6; protein phosphatase PTC6 [EC:3.1.3.16 3.1.3.43] D PAS_chr4_0893 Mitochondria protein phosphatase K17508 PTC7; protein phosphatase PTC7 [EC:3.1.3.16] D PAS_chr1-4_0298 Mitochondrially localized type 2C protein phosphatase K17508 PTC7; protein phosphatase PTC7 [EC:3.1.3.16] D PAS_chr4_0218 Mitochondrial type 2C protein phosphatase involved in regulation of pyruvate dehydrogenase activity K01102 PDP; pyruvate dehydrogenase phosphatase [EC:3.1.3.43] D PAS_chr1-3_0061 Phosphotyrosine-specific protein phosphatase K19806 PTP2_3; tyrosine-protein phosphatase 2/3 [EC:3.1.3.48] D PAS_chr2-1_0203 Phosphotyrosine-specific protein phosphatase involved in the inactivation of mitogen-activated prote K19806 PTP2_3; tyrosine-protein phosphatase 2/3 [EC:3.1.3.48] D PAS_chr2-1_0562 Protein phosphatase with specificity for serine, threonine, and tyrosine residues K04459 DUSP; dual specificity MAP kinase phosphatase [EC:3.1.3.16 3.1.3.48] D PAS_chr3_0618 Dual-specificity protein phosphatase K11240 MSG5; tyrosine-protein phosphatase MSG5 [EC:3.1.3.48] D PAS_chr1-3_0193 Protein phosphatase K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] D PAS_chr2-2_0345 Putative protein tyrosine phosphatase K18043 OCA1; tyrosine-protein phosphatase OCA1 [EC:3.1.3.48] D PAS_chr2-2_0393 Putative protein with similarity to predicted tyrosine phosphatases Oca1p and Siw14p K18044 OCA2; tyrosine-protein phosphatase-like protein OCA2 D PAS_chr2-2_0197 Tyrosine phosphatase that plays a role in actin filament organization and endocytosis K18045 SIW14; tyrosine-protein phosphatase SIW14 [EC:3.1.3.48] D PAS_chr1-3_0259 Cytoplasmic protein required for replication of Brome mosaic virus in S. cerevisiae K18046 OCA6; tyrosine-protein phosphatase OCA6 [EC:3.1.3.48] D PAS_chr1-4_0081 Protein phosphatase required for mitotic exit K06639 CDC14; cell division cycle 14 [EC:3.1.3.16 3.1.3.48] D PAS_chr2-2_0351 hypothetical protein K01110 PTEN; phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [EC:3.1.3.16 3.1.3.48 3.1.3.67] D PAS_chr3_0354 Phosphatidylinositol 3-phosphate [PI(3)P] phosphatase K18083 MTMR6_7_8; myotubularin-related protein 6/7/8 [EC:3.1.3.64 3.1.3.95] D PAS_chr1-4_0151 Protein phosphotyrosine phosphatase K14394 ACP1; low molecular weight phosphotyrosine protein phosphatase [EC:3.1.3.2 3.1.3.48] D PAS_chr1-1_0273 Protein tyrosine phosphatase involved in cell cycle control K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D PAS_chr2-1_0845 hypothetical protein K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] D PAS_chr3_0241 Plasma membrane associated protein phosphatase involved in the general stress response K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] D PAS_chr2-1_0248 Catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme K17617 CTDNEP1; CTD nuclear envelope phosphatase 1 [EC:3.1.3.16] D PAS_chr4_0453 Protein with a role in transcription K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] D PAS_chr4_0285 Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthes K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PAS_chr3_1148 hypothetical protein K17623 PUDP; pseudouridine 5'-phosphatase [EC:3.1.3.96] D PAS_chr3_0512 hypothetical protein K15728 LPIN; phosphatidate phosphatase LPIN [EC:3.1.3.4] C 01002 Peptidases and inhibitors [BR:ppa01002] D PAS_chr3_1087 Vacuolar aspartyl protease (proteinase A) K01381 PEP4; saccharopepsin [EC:3.4.23.25] D PAS_chr4_0584 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor K06009 YPS1_2; yapsin 1/2 [EC:3.4.23.41] D PAS_chr3_0635 Calpain-like cysteine protease K08576 CAPN7; calpain-7 [EC:3.4.22.-] D PAS_chr3_0853 Ubiquitin C-terminal hydrolase K05609 UCHL3; ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12] D PAS_chr1-4_0430 Putative cysteine protease similar to mammalian caspases K22684 MCA1; metacaspase-1 [EC:3.4.22.-] D PAS_chr3_0933 Ubiquitin-specific protease that specifically disassembles unanchored ubiquitin chains K11836 USP5_13; ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12] D PAS_chr2-2_0203 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins K11870 UBP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12] D PAS_chr3_0605 Ubiquitin carboxyl-terminal hydrolase K11835 USP4_11; ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12] D PAS_chr1-3_0261 Ubiquitin isopeptidase K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12] D PAS_chr4_0022 Ubiquitin-specific protease that may play a role in ubiquitin precursor processing K11838 USP7; ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] D PAS_chr1-4_0585 Ubiquitin-specific protease that interacts with Bre5p K11841 USP10; ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12] D PAS_chr1-4_0341 Ubiquitin-specific protease K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] D PAS_chr3_0117 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins, cleaves at the C ter K11849 USP25; ubiquitin carboxyl-terminal hydrolase 25 [EC:3.4.19.12] D PAS_chr1-3_0108 Ubiquitin-specific protease that deubiquitinates ubiquitin-protein moieties K11873 UBP10; ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12] D PAS_chr1-1_0040 Ubiquitin carboxyl-terminal hydrolase K11871 UBP7_11; ubiquitin carboxyl-terminal hydrolase 7/11 [EC:3.4.19.12] D PAS_chr1-1_0435 Putative ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific proteas K11872 UBP9_13; ubiquitin carboxyl-terminal hydrolase 9/13 [EC:3.4.19.12] D PAS_chr4_0174 Deubiquitinating enzyme anchored to the outer mitochondrial membrane K11874 UBP16; ubiquitin carboxyl-terminal hydrolase 16 [EC:3.4.19.12] D PAS_chr1-3_0191 GMP synthase, an enzyme that catalyzes the second step in the biosynthesis of GMP from IMP K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PAS_chr1-1_0430 Phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PAS_chr2-1_0626 Glutamine-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAS_chr3_0675 Asparagine synthetase, isozyme of Asn1p K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAS_chr2-2_0097 Ubl (ubiquitin-like protein)-specific protease that cleaves Smt3p protein conjugates K08592 SENP1; sentrin-specific protease 1 [EC:3.4.22.68] D PAS_chr1-1_0010 Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins K08596 SENP7; sentrin-specific protease 7 [EC:3.4.22.68] D PAS_chr4_0503 hypothetical protein K08597 SENP8; sentrin-specific protease 8 [EC:3.4.22.68] D PAS_chr1-4_0541 Separase, a caspase-like cysteine proteas K02365 ESP1; separase [EC:3.4.22.49] D PAS_chr1-4_0522 Conserved cysteine protease required for autophagy K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-] D PAS_chr2-2_0057 Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p K13719 OTU1; ubiquitin thioesterase OTU1 [EC:3.1.2.-] D PAS_chr4_0834 hypothetical protein K08658 RCE1; intramembrane prenyl-peptidase [EC:3.4.26.1] D PAS_chr2-1_0487 Leucyl aminopeptidase (leukotriene A4 hydrolase) with epoxide hydrolase activity K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D PAS_chr2-2_0380 Zinc-dependent metallopeptidase yscII, may have a role in obtaining leucine from dipeptide substrate K13721 APE2; aminopeptidase 2 [EC:3.4.11.-] D PAS_chr2-2_0295 TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation K03128 TAF2; transcription initiation factor TFIID subunit 2 D PAS_chr1-1_0327 Zinc metalloendopeptidase, found in the cytoplasm and intermembrane space of mitochondria K01405 PRD1; saccharolysin [EC:3.4.24.37] D PAS_chr2-1_0435 Mitochondrial intermediate peptidase K01410 MIPEP; mitochondrial intermediate peptidase [EC:3.4.24.59] D PAS_chr3_0419 Putative metalloprotease with similarity to the zinc carboxypeptidase family K08783 ECM14; extracellular matrix protein 14 [EC:3.4.17.-] D PAS_chr1-4_0511 Metalloprotease K01408 IDE; insulysin [EC:3.4.24.56] D PAS_chr2-2_0232 Haploid specific endoprotease K01422 AXL1; protease AXL1 [EC:3.4.24.-] D PAS_chr3_1223 hypothetical protein K01412 PMPCA; mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64] D PAS_chr3_0855 Smaller subunit of the mitochondrial processing protease (MPP) K17732 PMPCB; mitochondrial-processing peptidase subunit beta [EC:3.4.24.64] D PAS_chr1-1_0099 Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex) K00414 QCR1; ubiquinol-cytochrome c reductase core subunit 1 D PAS_chr2-2_0430 Subunit 2 of the ubiquinol cytochrome-c reductase complex K00415 QCR2; ubiquinol-cytochrome c reductase core subunit 2 D PAS_chr3_0803 Vacuolar aminopeptidase K01268 LAP4; aminopeptidase I [EC:3.4.11.22] D PAS_chr4_0913 hypothetical protein K01267 DNPEP; aspartyl aminopeptidase [EC:3.4.11.21] D PAS_chr4_0686 Vacuolar carboxypeptidase YscS K01293 E3.4.17.4; Gly-Xaa carboxypeptidase [EC:3.4.17.4] D PAS_chr1-4_0656 hypothetical protein K14262 DUG2; di- and tripeptidase [EC:3.4.-.-] D PAS_chr1-3_0128 Probable di-and tri-peptidase K15428 DUG1; Cys-Gly metallodipeptidase DUG1 [EC:3.4.13.-] D PAS_chr3_0388 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PAS_chr2-2_0159 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PAS_chr1-1_0066 Putative X-Pro aminopeptidase K14213 PEPD; Xaa-Pro dipeptidase [EC:3.4.13.9] D PAS_chr1-1_0111 Protein involved in negative regulation of transcription of iron regulon K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PAS_chr2-1_0667 Protein involved in negative regulation of transcription of iron regulon K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PAS_chr1-4_0468 Putative mitochondrial metallopeptidase K18573 ICP55; intermediate cleaving peptidase 55 [EC:3.4.11.26] D PAS_chr1-4_0611 Vacuolar aminopeptidase Y, processed to mature form by Prb1p K01264 APE3; aminopeptidase Y [EC:3.4.11.15] D PAS_chr1-1_0194 hypothetical protein K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10] D PAS_chr3_0815 Protein of unknown function involved in vacuolar protein sorting K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21] D PAS_FragB_0020 Vacuolar protein sorting-associated protein 70 K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21] D PAS_chr2-1_0825 hypothetical protein K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21] D PAS_chr1-4_0649 Mitochondrial respiratory chain complexes assembly protein RCA1 K08956 AFG3; AFG3 family protein [EC:3.4.24.-] D PAS_chr4_0856 Component, with Yta12p, of the mitochondrial inner membrane m-AAA protease K08956 AFG3; AFG3 family protein [EC:3.4.24.-] D PAS_chr4_0889 hypothetical protein K08955 YME1; ATP-dependent metalloprotease [EC:3.4.24.-] D PAS_chr2-2_0164 Highly conserved zinc metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D PAS_chr2-1_0464 Metalloendopeptidase of the mitochondrial inner membrane K23010 OMA1; metalloendopeptidase OMA1, mitochondrial [EC:3.4.24.-] D PAS_chr1-4_0347 Putative metalloprotease K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4] D PAS_chr2-2_0341 Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid K03030 PSMD14; 26S proteasome regulatory subunit N11 D PAS_chr1-3_0105 Catalytic subunit of the COP9 signalosome (CSN) complex K09613 COPS5; COP9 signalosome complex subunit 5 [EC:3.4.-.-] D PAS_chr2-2_0056 hypothetical protein K11866 STAMBP; STAM-binding protein [EC:3.4.19.12] D PAS_chr3_0200 Sumoylated protein of unknown function K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] D PAS_chr2-2_0367 Protein of unknown function which may contribute to lipid homeostasis and/or apoptosis K22686 NMA111; pro-apoptotic serine protease NMA111 [EC:3.4.21.-] D PAS_chr1-4_0548 Vacuolar proteinase B (YscB), a serine protease of the subtilisin family K01336 PRB1; cerevisin [EC:3.4.21.48 3.4.21.-] D PAS_chr1-1_0226 Vacuolar proteinase B (YscB), a serine protease of the subtilisin family K01336 PRB1; cerevisin [EC:3.4.21.48 3.4.21.-] D PAS_chr2-1_0304 Kex2 proprotein convertase K01341 KEX2; kexin [EC:3.4.21.61] D PAS_chr1-4_0251 hypothetical protein K14644 OSW3; subtilase-type proteinase RRT12 [EC:3.4.21.-] D PAS_chr2-2_0310 Dipeptidyl aminopeptidase, Golgi integral membrane protein K08787 STE13; dipeptidyl aminopeptidase Ste13 [EC:3.4.14.-] D PAS_chr3_0896 Dipeptidyl aminopeptidase, synthesized as a glycosylated precursor K01282 DAP2; dipeptidyl aminopeptidase B [EC:3.4.14.-] D PAS_chr4_0642 Putative protein of unknown function K24083 ABHD13; abhydrolase domain-containing protein 13 [EC:3.-.-.-] D PAS_chr1-4_0013 carboxypeptidase Y K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5] D PAS_chr2-1_0174 Protease involved in the processing of killer toxin and alpha factor precursor K01288 KEX1; carboxypeptidase D [EC:3.4.16.6] D PAS_chr3_0979 hypothetical protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PAS_chr1-1_0174 ATP-dependent Lon protease involved in degradation of misfolded proteins in mitochondria K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PAS_chr4_0441 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria K08675 PRSS15; ATP-dependent Lon protease [EC:3.4.21.53] D PAS_chr1-4_0187 18kDa catalytic subunit of the Signal Peptidase Complex K13280 SEC11; signal peptidase I [EC:3.4.21.89] D PAS_chr1-3_0247 Catalytic subunit of the mitochondrial inner membrane peptidase complex K09647 IMP1; mitochondrial inner membrane protease subunit 1 [EC:3.4.21.-] D PAS_chr1-1_0274 Catalytic subunit of the mitochondrial inner membrane peptidase complex K09648 IMP2; mitochondrial inner membrane protease subunit 2 [EC:3.4.21.-] D PAS_chr3_0986 Serine hydrolase with sequence similarity to monoglyceride lipase (MGL) K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D PAS_chr4_0232 Protein with carboxyl methyl esterase activity K13617 PPME1; protein phosphatase methylesterase 1 [EC:3.1.1.89] D PAS_chr4_0714 Mitochondrial serine protease K09650 PARL; rhomboid-like protein [EC:3.4.21.105] D PAS_chr4_0066 Alpha 1 subunit of the 20S core complex of the 26S proteasome K02730 PSMA6; 20S proteasome subunit alpha 1 [EC:3.4.25.1] D PAS_chr2-1_0188 Alpha 2 subunit of the 20S proteasome K02726 PSMA2; 20S proteasome subunit alpha 2 [EC:3.4.25.1] D PAS_chr4_0506 Alpha 3 subunit of the 20S proteasome, the only nonessential 20S subunit K02728 PSMA4; 20S proteasome subunit alpha 3 [EC:3.4.25.1] D PAS_chr3_0450 Alpha 4 subunit of the 20S proteasome K02731 PSMA7; 20S proteasome subunit alpha 4 [EC:3.4.25.1] D PAS_chr3_1129 Alpha 5 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism K02729 PSMA5; 20S proteasome subunit alpha 5 [EC:3.4.25.1] D PAS_chr2-1_0291 Alpha 6 subunit of the 20S proteasome K02725 PSMA1; 20S proteasome subunit alpha 6 [EC:3.4.25.1] D PAS_chr3_0699 Alpha 7 subunit of the 20S proteasome K02727 PSMA3; 20S proteasome subunit alpha 7 [EC:3.4.25.1] D PAS_chr3_0748 Beta 1 subunit of the 20S proteasome, responsible for cleavage after acidic residues in peptides K02738 PSMB6; 20S proteasome subunit beta 1 [EC:3.4.25.1] D PAS_chr2-1_0122 Endopeptidase with trypsin-like activity that cleaves after basic residues K02739 PSMB7; 20S proteasome subunit beta 2 [EC:3.4.25.1] D PAS_chr2-2_0073 Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism K02735 PSMB3; 20S proteasome subunit beta 3 [EC:3.4.25.1] D PAS_chr1-4_0117 Beta 4 subunit of the 20S proteasome K02734 PSMB2; 20S proteasome subunit beta 4 [EC:3.4.25.1] D PAS_chr4_0668 Beta 5 subunit of the 20S proteasome, responsible for the chymotryptic activity of the proteasome K02737 PSMB5; 20S proteasome subunit beta 5 [EC:3.4.25.1] D PAS_chr4_0776 Beta 6 subunit of the 20S proteasome K02732 PSMB1; 20S proteasome subunit beta 6 [EC:3.4.25.1] D PAS_chr1-4_0567 Beta 7 subunit of the 20S proteasome K02736 PSMB4; 20S proteasome subunit beta 7 [EC:3.4.25.1] D PAS_chr2-1_0077 hypothetical protein K08657 TASP1; taspase, threonine aspartase, 1 [EC:3.4.25.-] D PAS_chr3_0561 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAS_chr3_0640 Carboxypeptidase Y inhibitor, function requires acetylation by the NatB N-terminal acetyltransferase K06910 PEBP; phosphatidylethanolamine-binding protein C 01003 Glycosyltransferases [BR:ppa01003] D PAS_chr2-1_0727 UDP-N-acetyl-glucosamine-1-P transferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D PAS_chr1-4_0448 Catalytic component of UDP-GlcNAc transferase K07432 ALG13; beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] D PAS_chr3_0944 Component of UDP-GlcNAc transferase K07441 ALG14; beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] D PAS_chr2-1_0759 Mannosyltransferase, involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER) K03842 ALG1; beta-1,4-mannosyltransferase [EC:2.4.1.142] D PAS_c121_0002 hypothetical protein K03843 ALG2; alpha-1,3/alpha-1,6-mannosyltransferase [EC:2.4.1.132 2.4.1.257] D PAS_chr1-4_0417 Alpha-1,2-mannosyltransferase K03844 ALG11; alpha-1,2-mannosyltransferase [EC:2.4.1.131] D PAS_chr4_0712 Dolichol-P-Man dependent alpha(1-3) mannosyltransferase K03845 ALG3; alpha-1,3-mannosyltransferase [EC:2.4.1.258] D PAS_chr4_0544 Alpha-1,6-mannosyltransferase localized to the ER K03847 ALG12; alpha-1,6-mannosyltransferase [EC:2.4.1.260] D PAS_chr2-2_0036 Mannosyltransferase, involved in N-linked glycosylation K03846 ALG9; alpha-1,2-mannosyltransferase [EC:2.4.1.259 2.4.1.261] D PAS_chr3_0552 UDP-glucose:dolichyl-phosphate glucosyltransferase K00729 ALG5; dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] D PAS_chr2-1_0549 Alpha 1,3 glucosyltransferase K03848 ALG6; alpha-1,3-glucosyltransferase [EC:2.4.1.267] D PAS_chr3_0999 Glucosyl transferase, involved in N-linked glycosylation K03849 ALG8; alpha-1,3-glucosyltransferase [EC:2.4.1.265] D PAS_chr1-4_0475 Dolichyl-phosphoglucose-dependent alpha-1,2 glucosyltransferase of the ER K03850 ALG10; alpha-1,2-glucosyltransferase [EC:2.4.1.256] D PAS_chr1-4_0685 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18] D PAS_chr1-1_0459 Dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D PAS_chr2-1_0256 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr4_0777 Protein O-mannosyltransferase, transfers mannose from dolichyl phosphate-D-mannose K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr2-1_0212 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr1-1_0286 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PAS_chr2-1_0303 UDP-GlcNAc-binding and catalytic subunit of the enzyme that mediates the first step in GPI synthesis K03857 PIGA; phosphatidylinositol N-acetylglucosaminyltransferase subunit A [EC:2.4.1.198] D PAS_chr3_0386 Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I K05284 PIGM; GPI mannosyltransferase 1 subunit M [EC:2.4.1.-] D PAS_chr2-2_0039 Integral membrane protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis K05286 PIGB; GPI mannosyltransferase 3 [EC:2.4.1.-] D PAS_chr3_0882 Alpha 1,2-mannosyltransferase involved in glycosyl phosphatidyl inositol (GPI) biosynthesis K08098 PIGZ; GPI mannosyltransferase 4 [EC:2.4.1.-] D PAS_chr3_0357 ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D PAS_chr1-4_0037 Alpha-1,2-mannosyltransferase K05535 MNN2; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr3_0370 Alpha-1,2-mannosyltransferase, responsible for addition of the first alpha-1,2-linked mannose K05535 MNN2; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr3_0787 Alpha-1,2-mannosyltransferase K05535 MNN2; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr4_0103 Subunit of Golgi mannosyltransferase complex also containing Anp1p, Mnn10p, Mnn11p, and Hoc1p K05529 MNN9; mannan polymerase complexes MNN9 subunit [EC:2.4.1.232] D PAS_chr1-3_0251 Mannosyltransferase of the cis-Golgi apparatus K05528 OCH1; alpha 1,6-mannosyltransferase [EC:2.4.1.232] D PAS_chr3_0215 Alpha1,2-mannosyltransferase K10967 KTR1_3; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr3_1162 hypothetical protein K10967 KTR1_3; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr1-3_0138 Alpha-1,2-mannosyltransferase involved in O-and N-linked protein glycosylation K10967 KTR1_3; alpha 1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr1-4_0050 Putative mannosyltransferase involved in protein glycosylation K03854 KTR; mannosyltransferase [EC:2.4.1.-] D PAS_chr2-2_0201 Putative mannosyltransferase involved in protein glycosylation K03854 KTR; mannosyltransferase [EC:2.4.1.-] D PAS_chr2-2_0105 Mannosyltransferase involved in N-linked protein glycosylation K03854 KTR; mannosyltransferase [EC:2.4.1.-] D PAS_chr3_0781 Glycogen synthase, similar to Gsy1p K00693 GYS; glycogen synthase [EC:2.4.1.11] D PAS_chr4_0847 Self-glucosylating initiator of glycogen synthesis, also glucosylates N-dodecyl-beta-D-maltoside K00750 GYG1; glycogenin [EC:2.4.1.186] D PAS_chr2-1_0661 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr2-1_0263 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr1-3_0225 Catalytic subunit of 1,3-beta-D-glucan synthase K00706 E2.4.1.34; 1,3-beta-glucan synthase [EC:2.4.1.34] D PAS_chr1-3_0226 Beta-1,3-glucanosyltransferase, required for cell wall assembly K22832 GAS1; 1,3-beta-glucanosyltransferase GAS1 [EC:2.4.1.-] D PAS_chr1-3_0227 Beta-1,3-glucanosyltransferase, required for cell wall assembly K22832 GAS1; 1,3-beta-glucanosyltransferase GAS1 [EC:2.4.1.-] D PAS_chr3_0306 1,3-beta-glucanosyltransferase K22833 GAS2; 1,3-beta-glucanosyltransferase GAS2 [EC:2.4.1.-] D PAS_chr3_0184 1,3-beta-glucanosyltransferase K22835 GAS4; 1,3-beta-glucanosyltransferase GAS4 [EC:2.4.1.-] D PAS_chr4_0450 hypothetical protein K13682 BMT; beta-1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr1-4_0696 hypothetical protein K13682 BMT; beta-1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr4_0471 hypothetical protein K13682 BMT; beta-1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr4_0451 hypothetical protein K13682 BMT; beta-1,2-mannosyltransferase [EC:2.4.1.-] D PAS_chr1-1_0393 Chitin synthase I K00698 CHS1; chitin synthase [EC:2.4.1.16] D PAS_chr2-2_0094 Chitin synthase II K00698 CHS1; chitin synthase [EC:2.4.1.16] D PAS_chr2-1_0065 Chitin synthase III, catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin K00698 CHS1; chitin synthase [EC:2.4.1.16] D PAS_chr4_0167 UDP-glucose:sterol glucosyltransferase (Sterol 3-beta-glucosyltransferase) K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173] D PAS_chr3_0929 Protein required for beta-1,6 glucan biosynthesis K11718 HUGT; UDP-glucose:glycoprotein glucosyltransferase [EC:2.4.1.-] D PAS_chr1-3_0114 Protein required for beta-1,6 glucan biosynthesis K11718 HUGT; UDP-glucose:glycoprotein glucosyltransferase [EC:2.4.1.-] D PAS_c131_0017 hypothetical protein K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D PAS_chr1-3_0054 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins C 01004 Lipid biosynthesis proteins [BR:ppa01004] D PAS_chr1-1_0008 Beta subunit of fatty acid synthetase; catalyzes the synthesis of long-chain saturated fatty acids K00668 FAS1; fatty acid synthase subunit beta, fungi type [EC:2.3.1.86] D PAS_chr1-4_0295 Alpha subunit of fatty acid synthetase K00667 FAS2; fatty acid synthase subunit alpha, fungi type [EC:2.3.1.86] D PAS_chr2-1_0224 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAS_chr4_0511 Mitochondrial beta-keto-acyl synthase with possible role in fatty acid synthesis K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAS_chr2-1_0856 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAS_chr4_0368 Microsomal beta-keto-reductase K10251 HSD17B12; 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:1.1.1.62 1.1.1.330] D PAS_chr3_0222 3-hydroxyacyl-CoA dehydratase K10703 HACD; very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:4.2.1.134] D PAS_chr4_0780 Enoyl reductase that catalyzes the last step in each cycle of very long chain fatty acid elongation K10258 TER; very-long-chain enoyl-CoA reductase [EC:1.3.1.93] D PAS_chr2-2_0107 hypothetical protein K01074 PPT; palmitoyl-protein thioesterase [EC:3.1.2.22] D PAS_chr2-1_0701 hypothetical protein K17361 ACOT9; acyl-coenzyme A thioesterase 9 [EC:3.1.2.-] D PAS_chr2-1_0072 Delta(9) fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D PAS_chr4_0259 Delta(9) fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D PAS_chr4_0052 hypothetical protein K10256 FAD2; omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22] D PAS_chr3_0939 delta 4-(E)-sphingolipid desaturase K04712 DEGS; sphingolipid 4-desaturase/C4-monooxygenase [EC:1.14.19.17 1.14.18.5] D PAS_chr3_0602 Fatty acid elongase K10245 ELO2; fatty acid elongase 2 [EC:2.3.1.199] D PAS_chr3_0236 Elongase K10246 ELO3; fatty acid elongase 3 [EC:2.3.1.199] D PAS_chr3_0403 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-1_0767 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAS_chr2-1_0785 Long chain fatty acyl-CoA synthetase with a preference for C12:0-C16:0 fatty acids K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr4_0352 Long chain fatty acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr1-3_0081 Glycerol-3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42] D PAS_chr3_0073 Glycerol 3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase of the K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42] D PAS_chr1-3_0156 1-acyl-sn-gylcerol-3-phosphate acyltransferase K13509 AGPAT1_2; lysophosphatidate acyltransferase [EC:2.3.1.51] D PAS_chr3_0845 Lyso-phosphatidylcholine acyltransferase K13511 TAZ; monolysocardiolipin acyltransferase [EC:2.3.1.-] D PAS_chr3_0271 Lysophospholipid acyltransferase K13519 LPT1; lysophospholipid acyltransferase [EC:2.3.1.51 2.3.1.23 2.3.1.-] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ppa01006] D PAS_chr1-4_0314 Farnesyl pyrophosphate synthetase K00787 FDPS; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PAS_chr3_1007 Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate K00804 GGPS1; geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PAS_chr4_0819 Hexaprenyl pyrophosphate synthetase K05355 hexPS; hexaprenyl-diphosphate synthase [EC:2.5.1.82 2.5.1.83] D PAS_chr1-1_0424 Cis-prenyltransferase involved in synthesis of long-chain dolichols K11778 DHDDS; ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87] D PAS_chr4_0818 Cis-prenyltransferase involved in dolichol synthesis K11778 DHDDS; ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87] D PAS_chr3_0317 Farnesyl-diphosphate farnesyl transferase (squalene synthase) K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D PAS_chr1-3_0185 Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PAS_chr3_0291 Para hydroxybenzoate: polyprenyl transferase K06125 COQ2; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PAS_chr1-3_0194 Heme A:farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D PAS_chr1-3_0192 Alpha subunit of both the farnesyltransferase and type I geranylgeranyltransferase K05955 FNTA; protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [EC:2.5.1.58 2.5.1.59] D PAS_chr3_0636 Beta subunit of the CAAX farnesyltransferase (FTase) K05954 FNTB; protein farnesyltransferase subunit beta [EC:2.5.1.58] D PAS_chr4_0791 Beta subunit of geranylgeranyltransferase type I K11713 PGTB1; geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] D PAS_chr4_0741 Alpha subunit of Type II geranylgeranyltransferase K14050 RABGGTA; geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60] D PAS_chr3_0764 Beta subunit of Type II geranylgeranyltransferase K05956 RABGGTB; geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60] D PAS_chr3_0586 Rab escort protein, forms a complex with the Ras-like small GTPase Ypt1p K23460 CHM; Rab proteins geranylgeranyltransferase component A C 01007 Amino acid related enzymes [BR:ppa01007] D PAS_chr1-1_0241 Mitochondrial glutamyl-tRNA synthetase, encoded by a nuclear gene K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr1-4_0598 Glutamyl-tRNA synthetase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr3_0285 Glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAS_chr4_0522 Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAS_chr3_1110 Mitochondrial tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAS_chr3_0165 Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates tryptophanyl-tRNA K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAS_chr2-2_0245 Mitochondrial tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAS_chr1-4_0514 hypothetical protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAS_chr3_0166 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAS_chr2-1_0396 Mitochondrial methionyl-tRNA synthetase (MetRS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAS_chr2-1_0346 Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAS_chr2-1_0123 Mitochondrial isoleucyl-tRNA synthetase, null mutant is deficient in respiratory growth K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAS_chr4_0709 isoleucine-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAS_chr3_0754 Mitochondrial and cytoplasmic valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAS_chr4_0393 Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAS_chr1-4_0534 Mitochondrial leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAS_chr3_0949 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAS_chr1-1_0047 Mitochondrial lysine-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAS_chr1-4_0095 Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAS_chr4_0101 Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAS_chr1-1_0390 Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAS_chr1-1_0392 Mitochondrial asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAS_chr1-3_0244 Cytoplasmic and mitochondrial histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAS_chr3_0376 Cytoplasmic and mitochondrial glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PAS_chr1-4_0463 Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAS_chr1-4_0104 Probable mitochondrial seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAS_chr2-2_0209 Protein with similarity to tRNA synthetases K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAS_chr1-1_0391 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAS_chr2-1_0673 Mitochondrial threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAS_chr2-2_0238 Threonyl-tRNA synthetase, essential cytoplasmic protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAS_chr3_0462 Cytoplasmic alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAS_chr1-4_0558 Mitochondrial phenylalanyl-tRNA synthetase alpha subunit, active as a monomer K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAS_chr4_0276 Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAS_chr3_0144 Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate ac K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0200 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism K14455 GOT2; aspartate aminotransferase, mitochondrial [EC:2.6.1.1] D PAS_chr3_0482 Putative alanine transaminase (glutamic pyruvic transaminase) K00814 GPT; alanine transaminase [EC:2.6.1.2] D PAS_chr1-4_0608 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis K00838 ARO8; aromatic amino acid aminotransferase I / 2-aminoadipate transaminase [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5] D PAS_chr4_0147 Aromatic aminotransferase II K05821 ARO9; aromatic amino acid aminotransferase II [EC:2.6.1.58 2.6.1.28] D PAS_chr1-3_0154 hypothetical protein K05821 ARO9; aromatic amino acid aminotransferase II [EC:2.6.1.58 2.6.1.28] D PAS_chr3_1132 Kynurenine aminotransferase, catalyzes formation of kynurenic acid from kynurenine K14264 BNA3; kynurenine aminotransferase [EC:2.6.1.7] D PAS_chr2-1_0684 Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAS_chr2-1_0716 5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D PAS_chr3_0733 Component of serine palmitoyltransferase K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] D PAS_FragB_0040 Serine palmitoyltransferase 1 K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] D PAS_chr3_0410 L-ornithine transaminase (OTAse) K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D PAS_chr4_0645 Acetylornithine aminotransferase K00818 E2.6.1.11; acetylornithine aminotransferase [EC:2.6.1.11] D PAS_chr2-1_0107 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobu K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr4_0677 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) K13524 ABAT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] D PAS_chr4_0248 Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAS_chr4_0416 Alanine:glyoxylate aminotransferase (AGT), catalyzes the synthesis of glycine from glyoxylate K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PAS_chr3_0566 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:ppa00199] D PAS_chr3_0957 Lanosterol 14-alpha-demethylase, catalyzes the C-14 demethylation of lanosterol K05917 CYP51; sterol 14alpha-demethylase [EC:1.14.14.154 1.14.15.36] D PAS_chr3_0507 C-22 sterol desaturase K09831 ERG5; sterol 22-desaturase [EC:1.14.19.41] D PAS_chr3_0864 hypothetical protein K10437 PHAA; phenylacetate 2-hydroxylase [EC:1.14.14.54] C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ppa03000] D PAS_chr1-4_0339 Transcriptional activator K09464 GCN4; general control protein GCN4 D PAS_chr4_0601 Basic leucine zipper (bZIP) transcription factor required for oxidative stress tolerance K09043 YAP; AP-1-like transcription factor D PAS_chr1-4_0639 transcription factor K09043 YAP; AP-1-like transcription factor D PAS_chr1-1_0165 hypothetical protein K09051 SKO1; ATF/CREB family transcription factor D PAS_chr1-1_0381 bZIP transcription factor (ATF/CREB1 homolog) that regulates the unfolded protein response K16230 HAC1; transcriptional activator HAC1 D PAS_chr1-3_0098 DNA binding component of the SBF complex (Swi4p-Swi6p), a transcriptional activator K06649 SWI4; regulatory protein SWI4 D PAS_chr4_0634 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p K06648 SWI6; regulatory protein SWI6 D PAS_chr1-1_0033 hypothetical protein K21642 OPI1; transcriptional repressor OPI1 D PAS_chr2-2_0123 hypothetical protein K09102 INO; heteromeric Ino2p/Ino4p transcription factor D PAS_chr1-4_0407 Helix-loop-helix protein that binds the motif CACRTG K22484 CBF1; transcriptional regulator CBF1 D PAS_chr2-2_0153 Major transcriptional repressor of DNA-damage-regulated genes K09173 RFX1_2_3; regulatory factor X 1/2/3 D PAS_chr4_0626 Transcriptional activator of genes involved in nitrogen catabolite repression K09184 GATAF; GATA-binding protein, other eukaryote D PAS_chr1-4_0658 hypothetical protein K09184 GATAF; GATA-binding protein, other eukaryote D PAS_chr1-3_0126 Transcriptional activator of genes regulated by nitrogen catabolite repression (NCR) K09184 GATAF; GATA-binding protein, other eukaryote D PAS_chr1-4_0395 Transcriptional activator of genes regulated by nitrogen catabolite repression (NCR) K09184 GATAF; GATA-binding protein, other eukaryote D PAS_chr3_0418 Zinc-finger inhibitor of HO transcription K18658 ASH1; transcriptional regulatory protein ASH1 D PAS_chr1-3_0099 Transcription factor that activates transcription of genes K09238 ACE2; metallothionein expression activator D PAS_chr4_0487 Carbon source-responsive zinc-finger transcription factor K09466 ADR1; zinc finger protein ADR1 D PAS_chr1-4_0526 Regulatory protein MIG1 K09467 MIG; zinc-finger protein CreA/MIG D PAS_chr4_0334 Transcription factor involved in glucose repression K09467 MIG; zinc-finger protein CreA/MIG D PAS_chr2-2_0433 Transcription factor IIIA (TFIIIA), essential protein with nine C2H2 Zn-fingers K09191 GTF3A; general transcription factor IIIA D PAS_chr1-1_0113 Subunit of heterotrimeric Replication Protein A (RPA) K07466 RFA1; replication factor A1 D PAS_chr1-1_0434 Zinc finger protein involved in control of meiosis K09235 RME1; zinc finger protein RME1 D PAS_chr4_0169 Transcription factor that controls expression of many ribosome biogenesis genes K19487 SFP1; transcription factor SFP1 D PAS_chr2-2_0202 Transcription factor that activates transcription of genes involved in stress response K21543 CRZ1; transcription factor CRZ1 D PAS_chr4_0166 Putative transcription factor containing a C2H2 zinc finger K21544 NSF1; C2H2 transcription facotor D PAS_chr2-1_0819 hypothetical protein K21597 CAS5; cell wall integrity transcriptional regulator CAS5 D PAS_chr4_0084 Histone acetyltransferase catalytic subunit of the native multisubunit complex (NuA4) K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48] D PAS_chr1-4_0005 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein D PAS_chr1-4_0594 General negative regulator of transcription subunit 4 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] D PAS_chr2-1_0206 Subunit of COMPASS (Set1C), a complex which methylates histone H3 on lysine 4 and is required in tel K14960 CXXC1; COMPASS component SPP1 D PAS_chr1-1_0295 JmjC domain family histone demethylase specific for H3-K36 K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27] D PAS_chr2-1_0757 Zinc cluster transcriptional activator K09240 CAT8; transcriptional regulatory protein CAT8 D PAS_chr2-1_0732 Putative protein of unknown function K27389 RDS2; transcription activator of gluconeogenesis D PAS_chr2-1_0225 Zinc cluster transcriptional activator involved in conferring resistance to ketoconazole K27389 RDS2; transcription activator of gluconeogenesis D PAS_chr1-3_0036 hypothetical protein K27389 RDS2; transcription activator of gluconeogenesis D PAS_FragB_0075 Lactose regulatory protein K09241 GAL4; transcriptional regulatory protein GAL4 D PAS_chr3_0759 Zinc-finger transcription factor K09242 LEU3; transcriptional regulatory protein LEU3 D PAS_chr1-4_0401 transcriptional regulatory protein K09245 UGA3; transcriptional activator protein UGA3 D PAS_chr2-1_0029 Zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type, involved in the K09246 ARG81; arginine metabolism regulation protein II D PAS_chr2-1_0582 hypothetical protein K09247 CYP1; heme activator protein 1 D PAS_chr2-1_0329 Transcriptional activator of proline utilization genes K09248 PUT3; proline utilization trans-activator D PAS_chr1-3_0233 hypothetical protein K21641 RGT1; glucose transport transcription regulator RGT1 D PAS_chr1-4_0290 hypothetical protein K21632 WOR2; white-opaque regulator 2 D PAS_chr4_0252 hypothetical protein K21633 CZF1; zinc cluster transcription factor CZF1 D PAS_chr2-2_0467 hypothetical protein K12236 NFX1; transcriptional repressor NF-X1 D PAS_chr2-2_0301 Protein with seven cysteine-rich CCHC zinc-finger motifs, similar to human CNBP K09250 CNBP; cellular nucleic acid-binding protein D PAS_chr1-4_0308 Golgi membrane protein with similarity to mammalian CASP K09313 CUTL; homeobox protein cut-like D PAS_chr4_0878 Silenced copy of ALPHA2 at HML K09359 MATA2; mating-type protein A2 D PAS_chr2-2_0043 Homeobox transcription factor K02646 PHO2; regulatory protein PHO2 D PAS_chr2-1_0784 Homeodomain-containing transcriptional repressor K12411 YOX1; homeobox protein YOX1/YHP1 D PAS_chr1-4_0286 Forkhead transcription factor K09413 HCM1; forkhead transcription factor HCM1 D PAS_chr4_0205 Forkhead family transcription factor with a major role in the expression of G2/M phase genes K24664 FKH; forkhead protein FKH D PAS_chr2-1_0026 Trimeric heat shock transcription factor, activates multiple genes in response to stresses that incl K09419 HSFF; heat shock transcription factor, other eukaryote D PAS_chr1-1_0039 Myb-related transcription factor K09423 BAS1; Myb-like DNA-binding protein BAS1 D PAS_chr2-1_0583 Protein of unknown function that may interact with ribosomes, based on co-purification experiments K09424 REB1; Myb-like DNA-binding protein REB1 D PAS_chr1-4_0102 Myb-like DNA-binding protein K09425 K09425; Myb-like DNA-binding protein FlbD D PAS_chr1-3_0252 DNA-binding protein involved in either activation or repression of transcription K09426 RAP1; Myb-like DNA-binding protein RAP1 D PAS_chr2-1_0444 hypothetical protein K09426 RAP1; Myb-like DNA-binding protein RAP1 D PAS_chr3_0092 Transcription factor required for full Ty1 epxression, Ty1-mediated gene activation, and haploid inv K09448 TEAD; transcriptional enhancer factor D PAS_chr3_0968 Transcription factor involved in cell-type-specific transcription and pheromone response K12412 MCM1; pheromone receptor transcription factor D PAS_chr4_0093 Putative transcription factor involved in regulating the response to osmotic stress K09265 RLM1; transcription factor RLM1 D PAS_chr1-4_0183 TATA-binding protein, general transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PAS_chr1-1_0018 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) K09272 SSRP1; FACT complex subunit SSRP1/POB3 D PAS_chr2-2_0488 hypothetical protein K22483 HMO1; transcriptional regulator HMO1 D PAS_chr2-1_0017 Heme-dependent repressor of hypoxic genes K22496 RFG1; repressor RFG1/ROX1 D PAS_chr3_0766 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex K08064 NFYA; nuclear transcription factor Y, alpha D PAS_chr4_0442 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex K08065 NFYB; nuclear transcription Y subunit beta D PAS_chr4_0638 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex K08065 NFYB; nuclear transcription Y subunit beta D PAS_chr3_0638 Subunit of the heme-activated, glucose-repressed Hap2/3/4/5 CCAAT-binding complex K08066 NFYC; nuclear transcription factor Y, gamma D PAS_chr2-2_0362 Meiosis-specific transcription factor K12769 NDT80; meiosis-specific transcription factor NDT80 D PAS_chr3_0807 Mitochondrial intermembrane space cysteine motif protein K22758 CHCHD2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2 D PAS_chr4_0937 hypothetical protein K11215 STE12; transcription factor STE12 D PAS_chr1-3_0165 hypothetical protein K21631 GTI1; Gti1/Pac2 family transcription factor D PAS_chr3_0251 Putative protein with sequence similarity to S. pombe gti1+ (gluconate transport inducer 1) K21631 GTI1; Gti1/Pac2 family transcription factor D PAS_chr1-4_0530 hypothetical protein K12763 EFG1; enhanced filamentous growth protein 1 D PAS_chr4_0326 Transcriptional activator that enhances pseudohyphal growth K12763 EFG1; enhanced filamentous growth protein 1 C 03021 Transcription machinery [BR:ppa03021] D PAS_chr3_0568 RNA polymerase II largest subunit B220 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] D PAS_chr2-1_0125 RNA polymerase II second largest subunit B150, part of central core K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] D PAS_chr4_0344 RNA polymerase II third largest subunit B44, part of central core K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 D PAS_chr3_0244 RNA polymerase II subunit B12.5 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 D PAS_chr2-2_0104 RNA polymerase II subunit B32 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 D PAS_chr4_0906 RNA polymerase II subunit K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D PAS_chr1-4_0359 RNA polymerase II subunit B12.6 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 D PAS_chr3_0157 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 D PAS_chr2-2_0434 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 D PAS_chr2-2_0309 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 D PAS_chr1-1_0166 RNA polymerase subunit, found in RNA polymerase complexes I, II, and III K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 D PAS_chr2-1_0223 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 D PAS_chr2-1_0277 TFIIA large subunit K03122 TFIIA1; transcription initiation factor TFIIA large subunit D PAS_chr1-4_0121 Transcription initiation factor IIA small subunit K03123 TFIIA2; transcription initiation factor TFIIA small subunit D PAS_chr1-1_0059 Transcription factor TFIIB, a general transcription factor K03124 TFIIB; transcription initiation factor TFIIB D PAS_chr1-4_0183 TATA-binding protein, general transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PAS_chr1-4_0012 TFIID subunit (145 kDa) K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48] D PAS_chr2-2_0295 TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation K03128 TAF2; transcription initiation factor TFIID subunit 2 D PAS_chr1-4_0318 Transcription initiation factor TFIID subunit 3 K14650 TAF3; transcription initiation factor TFIID subunit 3 D PAS_chr3_0453 Subunit (90 kDa) of TFIID and SAGA complexes K03130 TAF5; transcription initiation factor TFIID subunit 5 D PAS_chr1-1_0095 Subunit (60 kDa) of TFIID and SAGA complexes K03131 TAF6; transcription initiation factor TFIID subunit 6 D PAS_FragD_0016 TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation K03132 TAF7; transcription initiation factor TFIID subunit 7 D PAS_chr2-1_0838 hypothetical protein K14649 TAF8; transcription initiation factor TFIID subunit 8 D PAS_chr2-1_0142 Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation K03133 TAF9B; transcription initiation factor TFIID subunit 9B D PAS_chr1-4_0182 Subunit (145 kDa) of TFIID and SAGA complexes K03134 TAF10; transcription initiation factor TFIID subunit 10 D PAS_chr2-2_0231 hypothetical protein K03135 TAF11; transcription initiation factor TFIID subunit 11 D PAS_chr2-1_0588 Subunit (61/68 kDa) of TFIID and SAGA complexes K03126 TAF12; transcription initiation factor TFIID subunit 12 D PAS_chr1-1_0012 TFIID subunit (19 kDa), involved in RNA polymerase II transcription initiation K03127 TAF13; transcription initiation factor TFIID subunit 13 D PAS_chr1-4_0265 hypothetical protein K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit D PAS_chr1-1_0082 RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm K14651 TAF15; transcription initiation factor TFIID subunit 15 D PAS_chr3_0178 TFIIE large subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D PAS_chr3_0737 TFIIE small subunit, involved in RNA polymerase II transcription initiation K03137 TFIIE2; transcription initiation factor TFIIE subunit beta D PAS_chr4_0518 TFIIF (Transcription Factor II) largest subunit K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha D PAS_chr1-4_0679 hypothetical protein K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] D PAS_chr4_0745 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 D PAS_chr1-4_0245 Component of the core form of RNA polymerase transcription factor TFIIH K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 D PAS_chr2-1_0043 Subunit of TFIIH complex, involved in transcription initiation, similar to 34 kDa subunit of human T K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 D PAS_chr4_0238 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 D PAS_chr1-4_0204 Component of the holoenzyme form of RNA polymerase transcription factor TFIIH K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D PAS_chr2-1_0797 5' to 3' DNA helicase, involved in nucleotide excision repair and transcription K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PAS_chr4_0061 Component of the RNA polymerase II general transcription and DNA repair factor TFIIH K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit D PAS_chr2-2_0041 Serine/threonine protein kinase, subunit of the transcription factor TFIIH K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] D PAS_chr4_0204 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D PAS_chr3_0575 Cyclin associated with protein kinase Kin28p K06634 CCNH; cyclin H D PAS_chr2-1_0144 Subunit of the RNA polymerase II mediator complex K15128 MED6; mediator of RNA polymerase II transcription subunit 6 D PAS_chr2-1_0275 Subunit of the RNA polymerase II mediator complex K15130 MED8; mediator of RNA polymerase II transcription subunit 8, fungi type D PAS_chr2-2_0466 hypothetical protein K15134 SRB4; mediator of RNA polymerase II transcription subunit 17, fungi type D PAS_chr4_0713 hypothetical protein K15136 SRB5; mediator of RNA polymerase II transcription subunit 18, fungi type D PAS_chr3_1056 Subunit of the RNA polymerase II mediator complex K15138 ROX3; mediator of RNA polymerase II transcription subunit 19, fungi type D PAS_chr2-1_0474 hypothetical protein K15140 SRB6; mediator of RNA polymerase II transcription subunit 22, fungi type D PAS_chr3_0272 hypothetical protein K15146 MED4; mediator of RNA polymerase II transcription subunit 4 D PAS_chr4_0858 hypothetical protein K15147 MED5; mediator of RNA polymerase II transcription subunit 5 D PAS_chr4_0435 Subunit of the RNA polymerase II mediator complex K15148 MED7; mediator of RNA polymerase II transcription subunit 7 D PAS_chr3_0152 Subunit of the RNA polymerase II mediator complex K15151 MED10; mediator of RNA polymerase II transcription subunit 10 D PAS_chr1-1_0288 Subunit of the RNA polymerase II mediator complex K15152 MED21; mediator of RNA polymerase II transcription subunit 21 D PAS_chr2-1_0800 Subunit of the RNA polymerase II mediator complex K15156 MED14; mediator of RNA polymerase II transcription subunit 14 D PAS_chr1-4_0155 hypothetical protein K15158 GAL11; mediator of RNA polymerase II transcription subunit 15, fungi type D PAS_chr1-1_0106 Subunit of the RNA polymerase II mediator complex K15160 SIN4; mediator of RNA polymerase II transcription subunit 16, fungi type D PAS_chr1-4_0305 Cyclin-dependent protein kinase, component of RNA polymerase II holoenzyme K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] D PAS_chr2-2_0194 Cyclin-like component of the RNA polymerase II holoenzyme K15161 CCNC; cyclin-C D PAS_chr1-1_0483 hypothetical protein K15163 SRB8; mediator of RNA polymerase II transcription subunit 12, fungi type D PAS_chr3_1134 Subunit of the RNA polymerase II mediator complex K15165 SSN2; mediator of RNA polymerase II transcription subunit 13, fungi type D PAS_chr3_1128 Histone acetyltransferase, acetylates N-terminal lysines on histones H2B and H3 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] D PAS_chr1-4_0571 Transcription-associated protein K08874 TRRAP; transformation/transcription domain-associated protein D PAS_chr3_0051 Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to act K11313 SUPT3H; transcription initiation protein SPT3 D PAS_chr3_0713 Subunit of the SAGA transcriptional regulatory complex, involved in proper assembly of the complex K11359 SPT7; transcriptional activator SPT7 D PAS_chr1-4_0365 Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SAL K11360 SPT8; transcriptional activator SPT8 D PAS_chr1-4_0620 hypothetical protein K11361 SPT20; transcription factor SPT20 D PAS_FragB_0044 Transcriptional coactivator HFI1/ADA1 K11362 HFI1; transcriptional coactivator HFI1/ADA1 D PAS_chr2-1_0780 Transcription coactivator, component of the ADA and SAGA transcriptional adaptor/HAT complexes K11314 TADA2A; transcriptional adapter 2-alpha D PAS_chr2-2_0284 Transcriptional regulator involved in glucose repression of Gal4p-regulated genes K11315 TADA3; transcriptional adapter 3 D PAS_chr2-2_0251 hypothetical protein K11363 SGF11; SAGA-associated factor 11 D PAS_chr1-1_0454 SaGa associated Factor 29kDa K11364 SGF29; SAGA-associated factor 29 D PAS_chr1-4_0651 Subunit of SAGA histone acetyltransferase complex K11365 SGF73; SAGA-associated factor 73 D PAS_chr2-1_0095 Nucleosome remodeling factor that functions in regulation of transcription elongation K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] D PAS_chr2-1_0761 Protein involved in mRNA export coupled transcription activation K11368 ENY2; enhancer of yellow 2 transcription factor D PAS_chr1-4_0341 Ubiquitin-specific protease K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] D PAS_chr3_0992 Protein involved in pre-mRNA splicing K12830 SF3B3; splicing factor 3B subunit 3 D PAS_chr3_1159 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 D PAS_chr2-2_0471 hypothetical protein K11771 SWI1; SWI/SNF chromatin-remodeling complex subunit SWI1 D PAS_FragD_0018 Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] D PAS_chr2-2_0128 ATPase component of the RSC chromatin remodeling complex K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] D PAS_chr1-4_0309 Subunit of the SWI/SNF chromatin remodeling complex K11772 SWI3; SWI/SNF complex subunit SWI3 D PAS_chr2-1_0821 hypothetical protein K11775 SNF12; SWI/SNF complex component SWP73 D PAS_chr1-4_0085 Actin-related protein K11767 ARP7; actin-related protein 7 D PAS_chr2-1_0720 Component of both the SWI/SNF and RSC chromatin remodeling complexes K11768 ARP9; actin-related protein 9 D PAS_chr2-2_0050 Component of the RSC chromatin remodeling complex K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2 D PAS_chr3_0068 Component of the RSC chromatin remodeling complex K11759 RSC4; chromatin structure-remodeling complex subunit RSC4 D PAS_chr1-4_0650 Chromatin structure-remodeling complex protein RSC7 K11761 NPL6; chromatin structure-remodeling complex protein RSC7 D PAS_chr3_0544 Component of the RSC chromatin remodeling complex K11762 RSC8; chromatin structure-remodeling complex subunit RSC8 D PAS_chr2-1_0193 Component of the RSC chromatin remodeling complex K11763 RSC9; chromatin structure-remodeling complex subunit RSC9 D PAS_chr3_1179 hypothetical protein K11766 RSC58; chromatin structure-remodeling complex subunit RSC58 D PAS_chr2-1_0375 Component of the RSC chromatin remodeling complex K11770 SFH1; chromatin structure-remodeling complex subunit SFH1 D PAS_chr2-2_0135 General transcription elongation factor TFIIS K03145 TFIIS; transcription elongation factor S-II D PAS_chr2-1_0350 Protein that forms a complex with Spt5p and mediates both activation and inhibition of transcription K15171 SUPT4H1; transcription elongation factor SPT4 D PAS_chr3_1136 Protein that forms a complex with Spt4p K15172 SUPT5H; transcription elongation factor SPT5 D PAS_chr4_0308 Transcription elongation factor K11292 SUPT6H; transcription elongation factor SPT6 D PAS_chr3_0256 mRNA 3' end processing factor K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D PAS_chr1-3_0183 RNA-binding subunit of the mRNA cleavage and polyadenylation factor K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 D PAS_chr1-1_0015 Putative endoribonuclease K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] D PAS_chr1-1_0249 Essential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 D PAS_chr2-1_0635 Catalytic subunit of type 1 serine/threonine protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr2-1_0407 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr1-1_0153 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr3_0641 Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF K06100 SYMPK; symplekin D PAS_chr1-4_0523 Transcription/RNA-processing factor K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D PAS_chr3_0846 Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D PAS_chr1-4_0277 Nuclear protein that binds to and stabilizes the exoribonuclease Rat1p K14845 RAI1; RAT1-interacting protein D PAS_chr1-4_0159 Protein that interacts with exonuclease Rat1p and Rai1p K15559 RTT103; regulator of Ty1 transposition protein 103 D PAS_chr1-4_0059 RNA-binding protein that interacts with the C-terminal domain of the RNA polymerase II large subunit K15560 NRD1; protein NRD1 D PAS_chr2-1_0592 Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] D PAS_chr2-2_0381 Peptidylprolyl-cis/trans-isomerase (PPIase) K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] D PAS_chr4_0902 RNAP II-associated protein K15174 PAF1; RNA polymerase II-associated factor 1 D PAS_chr2-1_0674 Constituent of Paf1 complex with RNA polymerase II, Paf1p, Hpr1p, Ctr9, Leo1, Rtf1 and Ccr4p K15175 CDC73; parafibromin D PAS_chr3_1035 Component of the Paf1p complex K15176 CTR9; RNA polymerase-associated protein CTR9 D PAS_chr3_1154 hypothetical protein K15177 LEO1; RNA polymerase-associated protein LEO1 D PAS_chr1-4_0596 Subunit of the RNA polymerase II-associated Paf1 complex K15178 RTF1; RNA polymerase-associated protein RTF1 D PAS_chr3_0375 Cyclin (Bur2p)-dependent protein kinase that functions in transcriptional regulation K15562 BUR1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23] D PAS_chr3_1187 hypothetical protein K15563 BUR2; protein BUR2 D PAS_chr2-1_0468 Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates the C-termina K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23] D PAS_chr2-1_0740 hypothetical protein K15565 CTK3; CTD kinase subunit gamma D PAS_chr2-2_0061 Essential abundant protein involved in regulation of transcription K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] D PAS_chr3_0884 Subunit of a heterodimeric NC2 transcription regulator complex with Bur6p K21751 DR1; down-regulator of transcription 1 D PAS_chr2-2_0304 Subunit of a heterodimeric NC2 transcription regulator complex with Ncb2p K21752 DRAP1; Dr1-associated corepressor D PAS_chr1-1_0024 hypothetical protein K15193 SPTY2D1; protein SPT2 D PAS_chr2-1_0845 hypothetical protein K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] D PAS_chr3_0241 Plasma membrane associated protein phosphatase involved in the general stress response K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] D PAS_chr4_0349 Protein that interacts with Spt6p and copurifies with Spt5p and RNA polymerase II K17498 SPN1; transcription factor SPN1 D PAS_chr4_0885 RNA polymerase II-associated protein K20826 RPAP1; RNA polymerase II-associated protein 1 D PAS_chr4_0453 Protein with a role in transcription K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] D PAS_chr3_1001 General repressor of transcription, forms complex with Cyc8p K06666 TUP1; general transcriptional corepressor TUP1 D PAS_chr2-1_0762 General transcriptional co-repressor, acts together with Tup1p K06665 SSN6; general transcriptional corepressor CYC8 D PAS_chr3_0968 Transcription factor involved in cell-type-specific transcription and pheromone response K12412 MCM1; pheromone receptor transcription factor D PAS_chr3_0716 Putative protein of unknown function K24104 GPN; GPN-loop GTPase D PAS_chr3_1006 Essential, conserved, cytoplasmic ATPase K24104 GPN; GPN-loop GTPase D PAS_chr1-3_0197 hypothetical protein K24104 GPN; GPN-loop GTPase D PAS_chr4_0302 RNA polymerase III subunit C160, part of core enzyme K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] D PAS_chr4_0239 Second-largest subunit of RNA polymerase III K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] D PAS_chr4_0826 RNA polymerase subunit, common to RNA polymerase I and III K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 D PAS_chr4_0925 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 D PAS_chr2-2_0431 RNA polymerase III subunit C82 K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 D PAS_chr3_0574 hypothetical protein K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 D PAS_chr4_0031 RNA polymerase III subunit C37 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 D PAS_chr4_0697 RNA polymerase III subunit C34 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 D PAS_chr1-1_0259 hypothetical protein K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 D PAS_chr4_0735 RNA polymerase III subunit C25, required for transcription initiation K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 D PAS_chr3_1051 RNA polymerase III subunit C17 K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 D PAS_chr3_0942 RNA polymerase III subunit C11 K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 D PAS_chr2-2_0433 Transcription factor IIIA (TFIIIA), essential protein with nine C2H2 Zn-fingers K09191 GTF3A; general transcription factor IIIA D PAS_chr2-1_0394 TFIIIB B-related factor K15196 BRF1; transcription factor IIIB 90 kDa subunit D PAS_chr2-2_0190 Essential subunit of RNA polymerase III transcription factor (TFIIIB), which is involved in transcri K15198 BDP1; transcription factor TFIIIB component B'' D PAS_chr1-1_0368 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) D PAS_c131_0009 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) D PAS_chr1-1_0045 Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) K15204 TFC3; transcription factor C subunit 3 D PAS_chr3_0118 One of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC) K15205 TFC6; transcription factor C subunit 6 D PAS_chr4_0377 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) K15206 TFC7; transcription factor C subunit 7 D PAS_chr1-3_0026 negative regulator of RNA polymerase III K25817 MAF1; repressor of RNA polymerase III transcription MAF1 D PAS_chr2-2_0387 RNA polymerase I subunit K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] D PAS_chr1-4_0324 RNA polymerase I subunit A135 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] D PAS_chr3_0651 RNA polymerase I subunit A49 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 D PAS_chr3_0707 RNA polymerase I subunit A43 K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 D PAS_chr2-2_0083 hypothetical protein K03003 RPA34; DNA-directed RNA polymerase I subunit RPA34 D PAS_chr2-1_0554 RNA polymerase I subunit A12.2 K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 D PAS_chr4_0760 Protein required for transcription of rDNA by RNA polymerase I K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 D PAS_chr2-1_0678 Protein involved in the transcription of 35S rRNA genes by RNA polymerase I K15218 RRN6; RNA polymerase I-specific transcription initiation factor RRN6 D PAS_chr4_0286 Protein involved in the transcription of 35S rRNA genes by RNA polymerase I K15219 RRN7; RNA polymerase I-specific transcription initiation factor RRN7 D PAS_chr4_0446 hypothetical protein K15221 RRN10; RNA polymerase I-specific transcription initiation factor RRN10 D PAS_chr4_0154 hypothetical protein K15222 RRN11; RNA polymerase I-specific transcription initiation factor RRN11 D PAS_chr2-2_0383 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] D PAS_chr4_0128 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] C 03019 Messenger RNA biogenesis [BR:ppa03019] D PAS_chr4_0950 hypothetical protein K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22] D PAS_chr2-2_0041 Serine/threonine protein kinase, subunit of the transcription factor TFIIH K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] D PAS_chr2-1_0216 Alpha (guanylyltransferase) subunit of the mRNA capping enzyme, a heterodimer (the other subunit is K00987 CEG1; mRNA guanylyltransferase [EC:2.7.7.50] D PAS_chr3_0609 Beta (RNA 5'-triphosphatase) subunit of the mRNA capping enzyme K01098 CET1; polynucleotide 5'-triphosphatase [EC:3.6.1.74] D PAS_chr2-1_0662 Large subunit of the nuclear mRNA cap-binding protein complex K12882 NCBP1; nuclear cap-binding protein subunit 1 D PAS_chr1-1_0154 Small subunit of the heterodimeric cap binding complex that also contains Sto1p K12883 NCBP2; nuclear cap-binding protein subunit 2 D PAS_chr3_0742 Subunit of cleavage factor I (CFI) K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] D PAS_chr3_0256 mRNA 3' end processing factor K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D PAS_chr1-3_0183 RNA-binding subunit of the mRNA cleavage and polyadenylation factor K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 D PAS_chr2-1_0816 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 D PAS_chr1-1_0015 Putative endoribonuclease K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] D PAS_chr1-1_0249 Essential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 D PAS_chr3_0333 Subunit of cleavage polyadenylation factor (CPF) K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 D PAS_chr1-4_0122 Essential conserved subunit of CPF (cleavage and polyadenylation factor) K15541 MPE1; protein MPE1 D PAS_FragB_0063 Polyadenylation factor subunit 2 K15542 PFS2; polyadenylation factor subunit 2 D PAS_chr1-1_0206 Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 K14962 WDR82; COMPASS component SWD2 D PAS_chr2-1_0635 Catalytic subunit of type 1 serine/threonine protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr2-1_0407 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr1-1_0153 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr1-4_0523 Transcription/RNA-processing factor K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D PAS_chr2-2_0134 Cleavage and polyadenylation factor I (CF I) component K14407 CSTF2; cleavage stimulation factor subunit 2 D PAS_chr2-2_0133 hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2 D PAS_chr2-1_0232 Cleavage and polyadenylation factor I (CF I) component involved in cleavage and polyadenylation of M K14408 CSTF3; cleavage stimulation factor subunit 3 D PAS_chr3_0641 Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF K06100 SYMPK; symplekin D PAS_chr1-4_0686 Small nuclear ribonucleoprotein-associated protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' D PAS_chr1-4_0614 Core Sm protein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 D PAS_chr2-1_0138 Core Sm protein Sm E K11097 SNRPE; small nuclear ribonucleoprotein E D PAS_chr2-2_0429 Core Sm protein Sm F K11098 SNRPF; small nuclear ribonucleoprotein F D PAS_FragB_0004 Small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G D PAS_chr2-1_0350 Protein that forms a complex with Spt5p and mediates both activation and inhibition of transcription K15171 SUPT4H1; transcription elongation factor SPT4 D PAS_chr3_1136 Protein that forms a complex with Spt4p K15172 SUPT5H; transcription elongation factor SPT5 D PAS_chr2-1_0364 Probable mRNA N6-adenosine methyltransferase K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] D PAS_chr4_0468 Transcription factor required for gene regulation in repsonse to pheromones K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit D PAS_chr4_0027 hypothetical protein K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] D PAS_chr1-4_0645 Poly(A) polymerase K14376 PAP; poly(A) polymerase [EC:2.7.7.19] D PAS_chr2-1_0465 Basic zinc-finger protein K13102 KIN; DNA/RNA-binding protein KIN17 D PAS_chr1-4_0590 Nuclear polyadenylated RNA-binding protein K23039 NAB2; nuclear polyadenylated RNA-binding protein NAB2 D PAS_chr1-4_0616 hypothetical protein K12881 THOC4; THO complex subunit 4 D PAS_chr3_0097 Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucle K12881 THOC4; THO complex subunit 4 D PAS_chr1-1_0019 Component of the TREX complex required for nuclear mRNA export K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] D PAS_chr1-4_0461 Nucleolar protein required for maturation of 18S rRNA K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D PAS_chr2-1_0528 hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1 D PAS_chr1-1_0255 Subunit of the THO complex K12879 THOC2; THO complex subunit 2 D PAS_chr3_0400 hypothetical protein K12880 THOC3; THO complex subunit 3 D PAS_chr3_0420 hypothetical protein K18712 HPR1; THO complex subunit HPR1 D PAS_chr1-1_0227 Nuclear pore-associated protein, forms a complex with Sac3p K23801 PCID2; nuclear mRNA export protein PCID2/THP1 D PAS_chr4_0299 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 D PAS_chr2-1_0761 Protein involved in mRNA export coupled transcription activation K11368 ENY2; enhancer of yellow 2 transcription factor D PAS_chr4_0388 Mitochondrial ribosomal protein of the large subunit K16466 CETN3; centrin-3 D PAS_chr1-3_0221 Nuclear pore-associated protein, forms a complex with Thp1p K23719 SAC3; nuclear mRNA export protein SAC3 D PAS_chr4_0316 Myosin-like protein associated with the nuclear envelope K09291 TPR; nucleoprotein TPR D PAS_chr4_0710 Component of the nuclear pore complex K14298 RAE1; mRNA export factor D PAS_chr1-3_0057 Component of both the Nup84 nuclear pore sub-complex and of the COPII complex K14004 SEC13; protein transport protein SEC13 D PAS_chr3_1039 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) K14304 NUP85; nuclear pore complex protein Nup85 D PAS_chr4_0354 Nucleoporin, essential subunit of the nuclear pore complex (NPC) K14308 NUP54; nuclear pore complex protein Nup54 D PAS_chr3_0825 Essential component of the nuclear pore complex, which mediates nuclear import and export K14306 NUP62; nuclear pore complex protein Nup62 D PAS_chr3_1204 hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93 D PAS_chr1-1_0232 Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore K14297 NUP98; nuclear pore complex protein Nup98-Nup96 D PAS_chr3_1070 Subunit of the nuclear pore complex (NPC) K14301 NUP107; nuclear pore complex protein Nup107 D PAS_chr3_0993 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) K14300 NUP133; nuclear pore complex protein Nup133 D PAS_chr1-3_0071 Subunit of the nuclear pore complex (NPC) K14311 NUP188; nuclear pore complex protein Nup188 D PAS_chr4_0163 Abundant subunit of the nuclear pore complex (NPC) K14312 NUP155; nuclear pore complex protein Nup155 D PAS_chr2-2_0270 Essential structural subunit of the nuclear pore complex (NPC) K14310 NUP205; nuclear pore complex protein Nup205 D PAS_chr3_0431 Subunit of the Nsp1p-Nup57p-Nup49p-Nic96p subcomplex of the nuclear pore complex (NPC) K14307 NUPL1; nucleoporin p58/p45 D PAS_chr2-1_0154 Nuclear envelope protein with multiple putative transmembrane domains K14315 NDC1; nucleoporin NDC1 D PAS_chr1-1_0224 Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex K14299 SEH1; nucleoporin SEH1 D PAS_chr3_1233 hypothetical protein K18715 NUP159; nucleoporin NUP159 D PAS_chr3_0696 hypothetical protein K18716 NUP42; nucleoporin NUP42 D PAS_chr4_0657 Nuclear pore complex subunit, part of a subcomplex also containing Nup53p, Nup170p, and Pse1p K18717 ASM4; nucleoporin ASM4 D PAS_chr1-4_0603 hypothetical protein K18718 NUP60; nucleoporin NUP60 D PAS_chr2-2_0385 Essential nucleoporin K18720 NUP145; nucleoporin NUP145 D PAS_chr3_0524 Essential component of the nuclear pore complex K18721 NUP1; nucleoporin NUP1 D PAS_chr2-2_0325 Nucleoporin involved in nucleocytoplasmic transport K18722 NUP2; nucleoporin NUP2 D PAS_chr4_0800 Cytoplasmic nucleoporin required for polyadenylated RNA export but not for protein import K18723 GLE1; nucleoporin GLE1 D PAS_chr4_0394 Poly(A)RNA binding protein involved in nuclear mRNA export K14284 NXF; nuclear RNA export factor D PAS_chr4_0528 mRNA transport regulator, essential nuclear protein K14543 MTR2; mRNA transport regulator MTR2 D PAS_chr3_0715 Nuclear pore membrane glycoprotein K18725 POM152; nucleoporin POM152 D PAS_chr1-4_0091 hypothetical protein K14017 SNL1; HSP70 co-chaperone SNL1 D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_chr4_0649 UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p K18726 FAF2; FAS-associated factor 2 D PAS_FragD_0026 ATPase in ER, nuclear membrane and cytosol with homology to mammalian P97 K13525 VCP; transitional endoplasmic reticulum ATPase D PAS_chr2-2_0243 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus K14290 XPO1; exportin-1 D PAS_chr4_0719 GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport K14319 RANGAP1; Ran GTPase-activating protein 1 D PAS_chr1-1_0082 RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm K14651 TAF15; transcription initiation factor TFIID subunit 15 D PAS_chr3_0972 Cytoplasmic mRNA cap binding protein K03259 EIF4E; translation initiation factor 4E D PAS_chr3_0595 Translation initiation factor eIF4A, identical to Tif1p K03257 EIF4A; translation initiation factor 4A D PAS_chr1-1_0053 Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) K03260 EIF4G; translation initiation factor 4G D PAS_chr3_1054 Translation initiation factor eIF-4B, has RNA annealing activity K03258 EIF4B; translation initiation factor 4B D PAS_chr4_0140 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] D PAS_chr2-1_0432 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein D PAS_chr2-1_0097 Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between th K13126 PABPC; polyadenylate-binding protein D PAS_chr1-4_0283 Poly(A) binding protein, part of the 3'-end RNA-processing complex K13126 PABPC; polyadenylate-binding protein D PAS_chr2-1_0709 Putative RNA helicase K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] D PAS_chr1-1_0269 Putative RNA helicase related to Ski2p, involved in translation inhibition of non-poly(A) mRNAs K18664 SLH1; antiviral helicase SLH1 [EC:5.6.2.6] D PAS_chr1-1_0064 hypothetical protein K07575 MCTS; malignant T-cell-amplified sequence D PAS_chr3_1185 hypothetical protein K24272 DENR; density-regulated protein D PAS_chr1-4_0355 Subunit of cleavage factor I K14411 MSI; RNA-binding protein Musashi D PAS_chr2-1_0730 Endoribonuclease K06965 PELO; protein pelota D PAS_chr2-1_0414 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM) K14396 PABPN1; polyadenylate-binding protein 2 D PAS_chr2-1_0233 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM) K14396 PABPN1; polyadenylate-binding protein 2 D PAS_chr1-3_0074 Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] D PAS_chr1-1_0196 Component of the spliceosome complex involved in pre-mRNA splicing K12867 SYF1; pre-mRNA-splicing factor SYF1 D PAS_chr1-4_0335 Conserved nuclear RNA-binding protein K18732 SARNP; SAP domain-containing ribonucleoprotein D PAS_chr4_0702 Nucleotide exchange factor for Gsp1p, localizes to the nucleus K11493 RCC1; regulator of chromosome condensation D PAS_FragD_0022 Deletion mutant is synthetically lethal with MEN mutants K23802 LENG8; SAC3 family protein LENG8/THP3 D PAS_chr4_0727 Polypeptide release factor involved in translation termination K03265 ETF1; peptide chain release factor subunit 1 D PAS_chr3_0398 Translation termination factor eRF3 K03267 ERF3; peptide chain release factor subunit 3 D PAS_chr3_0657 ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] D PAS_chr4_0894 Nonsense-mediated mRNA decay protein 2 K14327 UPF2; regulator of nonsense transcripts 2 D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr4_0494 Regulatory subunit A of the heterotrimeric protein phosphatase 2A K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A D PAS_chr2-1_0831 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B D PAS_chr2-2_0274 B-type regulatory subunit of protein phosphatase 2A (PP2A) K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D PAS_chr3_0671 hypothetical protein K18737 SHE3; SWI5-dependent HO expression protein 3 D PAS_chr1-4_0045 RNA binding protein with similarity to hnRNP-K that localizes to the cytoplasm and subtelomeric DNA K18738 HEK; heterogeneous nuclear rnp K-like protein D PAS_FragB_0012 Myosin-2 K10357 MYO5; myosin V D PAS_chr3_0418 Zinc-finger inhibitor of HO transcription K18658 ASH1; transcriptional regulatory protein ASH1 D PAS_FragB_0052 Translational elongation factor EF-1 alpha K03231 EEF1A; elongation factor 1-alpha D PAS_chr4_0102 elongation factor 1 gamma domain-containing protein K03233 EEF1G; elongation factor 1-gamma D PAS_chr3_1071 Translation elongation factor EF-1 gamma K03233 EEF1G; elongation factor 1-gamma D PAS_chr1-4_0226 hypothetical protein K03233 EEF1G; elongation factor 1-gamma D PAS_chr2-2_0414 Protein with a role in maintenance of cellular integrity K18748 SSD1; protein SSD1 D PAS_chr3_0432 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D PAS_chr1-4_0007 Cytoplasmic DExD/H-box helicase K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] D PAS_chr4_0345 Protein containing an Lsm domain, may bind RNA and have a role in RNA processing K18749 LSM14; protein LSM14 D PAS_chr1-3_0022 Transportin, cytosolic karyopherin beta 2 K18752 TNPO1; transportin-1 D PAS_chr1-4_0357 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr3_0964 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr1-1_0351 hypothetical protein K18757 LARP1; la-related protein 1 D PAS_chr4_0194 Catalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] D PAS_chr1-3_0157 Subunit of the Dcp1p-Dcp2p decapping enzyme complex K12612 DCP1; mRNA-decapping enzyme subunit 1 D PAS_chr3_0442 Lsm (Like Sm) protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 D PAS_chr4_0448 Lsm (Like Sm) protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 D PAS_chr1-1_0014 Lsm (Like Sm) protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 D PAS_chr1-3_0142 Lsm (Like Sm) protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 D PAS_chr1-3_0256 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 D PAS_chr3_0060 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 D PAS_chr1-1_0487 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 D PAS_chr4_0281 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D PAS_chr2-1_0186 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0623 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0431 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels K12604 CNOT1; CCR4-NOT transcription complex subunit 1 D PAS_chr2-1_0494 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels K12605 CNOT2; CCR4-NOT transcription complex subunit 2 D PAS_FragD_0003 Subunit of the CCR4-NOT complex K12580 CNOT3; CCR4-NOT transcription complex subunit 3 D PAS_chr1-4_0152 Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcrip K12580 CNOT3; CCR4-NOT transcription complex subunit 3 D PAS_chr1-4_0594 General negative regulator of transcription subunit 4 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] D PAS_chr4_0490 Component of the CCR4-NOT transcriptional complex K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] D PAS_chr1-1_0143 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease comple K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] D PAS_chr2-1_0541 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D PAS_chr2-2_0378 Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D PAS_chr1-4_0100 hypothetical protein K12615 EDC3; enhancer of mRNA-decapping protein 3 D PAS_chr4_0906 RNA polymerase II subunit K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D PAS_chr2-2_0058 Eukaryotic initiation factor (eIF) 2A K15026 EIF2A; translation initiation factor 2A D PAS_chr3_0701 Subunit of the core complex of translation initiation factor 3(eIF3), essential for translation K03253 EIF3B; translation initiation factor 3 subunit B D PAS_chr1-4_0063 G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein D PAS_chr2-1_0302 Putative catalytic subunit of a class II histone deacetylase complex K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] D PAS_chr3_0846 Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D PAS_chr3_0273 Non-essential hydrolase involved in mRNA decapping K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] D PAS_chr4_0563 Subunit of the exosome, which is an essential complex present in both nucleus and cytoplasm K07573 CSL4; exosome complex component CSL4 D PAS_chr3_0581 3'-5' exoribonuclease involved in rRNA processing K03679 RRP4; exosome complex component RRP4 D PAS_chr1-4_0455 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40 D PAS_chr3_0385 3'-to-5' phosphorolytic exoribonuclease that is A subunit of the exosome K11600 RRP41; exosome complex component RRP41 D PAS_chr3_0753 Protein involved in rRNA processing K12590 RRP46; exosome complex component RRP46 D PAS_chr1-4_0092 exosome component K12587 MTR3; exosome complex component MTR3 D PAS_chr3_1067 Protein involved in rRNA processing K12589 RRP42; exosome complex component RRP42 D PAS_chr3_0603 Protein involved in rRNA processing K12586 RRP43; exosome complex component RRP43 D PAS_chr3_0956 Protein involved in rRNA processing K03678 RRP45; exosome complex component RRP45 D PAS_chr1-4_0108 Exonuclease component of the nuclear exosome K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] D PAS_chr3_1072 hypothetical protein K12592 C1D; exosome complex protein LRP1 D PAS_chr2-1_0266 hypothetical protein K12594 MPP6; M-phase phosphoprotein 6, fungi type D PAS_chr4_0229 Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p) K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] D PAS_chr2-2_0239 RING finger protein that interacts with the arginine methyltransferase Hmt1p K12597 AIR1_2; protein AIR1/2 D PAS_chr2-2_0436 Involved in exosome mediated 3' to 5' mRNA degradation & translation inhibition of non-poly(A) mRNAs K12600 SKI3; superkiller protein 3 D PAS_chr1-4_0501 Protein involved in exosome mediated 3' to 5' mRNA degradation K12601 SKI8; superkiller protein 8 D PAS_chr4_0224 Evolutionarily conserved subunit of the CCR4-NOT complex involved in controlling mRNA initiation K12606 RCD1; CCR4-NOT transcription complex subunit 9 D PAS_chr1-4_0366 Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex K12608 CAF16; CCR4-NOT complex subunit CAF16 D PAS_chr4_0633 hypothetical protein K12609 CAF120; CCR4-NOT transcriptional complex subunit CAF120 D PAS_chr3_0075 hypothetical protein K12609 CAF120; CCR4-NOT transcriptional complex subunit CAF120 D PAS_FragB_0007 Protein VTS1 K27407 VTS1; RNA-binding protein VTS1 D PAS_chr4_0127 RNAase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAS_chr3_0681 RNA exonuclease, required for U4 snRNA maturation K13288 orn; oligoribonuclease [EC:3.1.-.-] D PAS_chr3_0082 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAS_chr2-1_0402 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr1-4_0047 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAS_chr3_0365 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr3_0402 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr4_0158 Tetradecameric mitochondrial chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] C 03041 Spliceosome [BR:ppa03041] D PAS_chr2-1_0662 Large subunit of the nuclear mRNA cap-binding protein complex K12882 NCBP1; nuclear cap-binding protein subunit 1 D PAS_chr1-1_0154 Small subunit of the heterodimeric cap binding complex that also contains Sto1p K12883 NCBP2; nuclear cap-binding protein subunit 2 D PAS_chr1-4_0686 Small nuclear ribonucleoprotein-associated protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' D PAS_chr4_0781 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1 D PAS_chr1-4_0228 Core Sm protein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2 D PAS_chr1-4_0614 Core Sm protein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 D PAS_chr2-1_0138 Core Sm protein Sm E K11097 SNRPE; small nuclear ribonucleoprotein E D PAS_chr2-2_0429 Core Sm protein Sm F K11098 SNRPF; small nuclear ribonucleoprotein F D PAS_FragB_0004 Small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G D PAS_chr2-2_0449 hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa D PAS_chr2-1_0450 Component of the U1 snRNP complex required for pre-mRNA splicing K11095 SNRPC; U1 small nuclear ribonucleoprotein C D PAS_chr4_0201 Essential ATP-dependent RNA helicase of the DEAD-box protein family K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D PAS_chr1-4_0186 U1 snRNP protein involved in splicing K12821 PRPF40; pre-mRNA-processing factor 40 D PAS_chr2-1_0818 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A' D PAS_chr3_0663 hypothetical protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B'' D PAS_chr4_0095 Subunit of the SF3a splicing factor complex, required for spliceosome assembly K12825 SF3A1; splicing factor 3A subunit 1 D PAS_chr1-3_0241 hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2 D PAS_chr3_0642 Subunit of the SF3a splicing factor complex, required for spliceosome assembly K12827 SF3A3; splicing factor 3A subunit 3 D PAS_chr2-1_0418 U2-snRNP associated splicing factor K12828 SF3B1; splicing factor 3B subunit 1 D PAS_chr2-1_0455 Protein required for assembly of U2 snRNP into the spliceosome, forms a complex with Hsh49p and Hsh1 K12829 SF3B2; splicing factor 3B subunit 2 D PAS_chr3_0992 Protein involved in pre-mRNA splicing K12830 SF3B3; splicing factor 3B subunit 3 D PAS_chr3_1252 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4 D PAS_chr1-1_0256 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5 D PAS_chr1-1_0060 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14 D PAS_chr3_0582 Zinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance K12834 PHF5A; PHD finger-like domain-containing protein 5A D PAS_chr2-1_0187 hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit D PAS_chr1-3_0064 hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit D PAS_chr1-4_0592 RNA helicase in the DEAH-box family K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D PAS_chr3_0644 RNA helicase in the DEAD-box family, necessary for prespliceosome formation K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7] D PAS_chr2-1_0515 Kinetochore checkpoint WD40 repeat protein K02180 BUB3; cell cycle arrest protein BUB3 D PAS_chr4_0929 hypothetical protein K13093 HTATSF1; HIV Tat-specific factor 1 D PAS_chr3_0324 Component of the commitment complex K13095 SF1; splicing factor 1 D PAS_chr4_0448 Lsm (Like Sm) protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 D PAS_chr1-1_0014 Lsm (Like Sm) protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 D PAS_chr1-3_0142 Lsm (Like Sm) protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 D PAS_chr1-3_0256 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 D PAS_chr3_0060 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 D PAS_chr1-1_0487 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 D PAS_chr4_0281 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D PAS_chr3_1147 hypothetical protein K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3 D PAS_chr2-2_0424 Splicing factor, component of the U4/U6-U5 snRNP complex K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4 D PAS_chr3_0755 Splicing factor, component of the U4/U6-U5 snRNP complex K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31 D PAS_chr3_1041 small nucleolar ribonucleoprotein SNU13 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 D PAS_chr1-3_0072 Splicing factor that reanneals U4 and U6 snRNPs during spliceosome recycling K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3 D PAS_chr2-2_0100 GTPase component of U5 snRNP involved in mRNA splicing via spliceosome K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component D PAS_chr4_0538 Splicing factor, component of the U4/U6-U5 snRNP complex K12855 PRPF6; pre-mRNA-processing factor 6 D PAS_chr3_1077 Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing K12856 PRPF8; pre-mRNA-processing factor 8 D PAS_chr1-1_0317 hypothetical protein K12857 SNRNP40; Prp8 binding protein D PAS_chr1-4_0051 RNA-dependent ATPase RNA helicase (DEIH box) K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6] D PAS_chr2-2_0187 RNA helicase in the DEAD-box family, involved in RNA isomerization at the 5' splice site K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7] D PAS_chr3_0665 17-kDa component of the U4/U6aU5 tri-snRNP, plays an essential role in pre-mRNA splicing K12859 TXNL4A; U5 snRNP protein, DIM1 family D PAS_chr1-3_0085 hypothetical protein K13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2 D PAS_chr4_0126 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1 D PAS_chr2-2_0340 Conserved zinc-finger domain protein involved in pre-mRNA splicing K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2 D PAS_chr1-3_0111 hypothetical protein K12846 SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3 D PAS_chr1-1_0383 Component of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23 D PAS_chr4_0782 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A D PAS_chr1-4_0343 Essential protein K13100 CWC22; pre-mRNA-splicing factor CWC22 D PAS_chr3_0496 RNA-dependent ATPase in the DEAH-box family K12814 PRP2; pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:5.6.2.6] D PAS_chr4_0764 Splicing factor associated with the spliceosome K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D PAS_chr1-3_0182 Essential splicing factor K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D PAS_chr4_0670 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27 D PAS_chr4_0083 Splicing factor that is found in the Cef1p subcomplex of the spliceosome K12862 PLRG1; pleiotropic regulator 1 D PAS_chr1-3_0268 hypothetical protein K12863 CWC15; protein CWC15 D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_1240 hypothetical protein K06063 SNW1; SNW domain-containing protein 1 D PAS_chr1-1_0196 Component of the spliceosome complex involved in pre-mRNA splicing K12867 SYF1; pre-mRNA-splicing factor SYF1 D PAS_chr4_0309 hypothetical protein K12868 SYF2; pre-mRNA-splicing factor SYF2 D PAS_chr3_0325 Essential splicesome assembly factor K12869 CRN; crooked neck D PAS_chr2-2_0144 Protein involved in bud-site selection K12873 BUD31; bud site selection protein 31 D PAS_chr4_0020 Component of the spliceosome complex involved in pre-mRNA splicing K12870 ISY1; pre-mRNA-splicing factor ISY1 D PAS_chr1-1_0416 Pre-mRNA splicing factor K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11 D PAS_chr2-2_0188 Protein involved in pre-mRNA splicing, component of a complex containing Cef1p K27398 CWC2; pre-mRNA-splicing factor CWC2 D PAS_chr3_0433 Subunit of the RES complex K13106 BUD13; pre-mRNA-splicing factor CWC26 D PAS_chr1-1_0468 hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2 D PAS_chr4_0230 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1 D PAS_chr3_0159 hypothetical protein K13110 MFAP1; microfibrillar-associated protein 1 D PAS_chr2-1_0671 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11 D PAS_chr1-1_0019 Component of the TREX complex required for nuclear mRNA export K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] D PAS_chr1-4_0461 Nucleolar protein required for maturation of 18S rRNA K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D PAS_chr1-1_0255 Subunit of the THO complex K12879 THOC2; THO complex subunit 2 D PAS_chr3_0400 hypothetical protein K12880 THOC3; THO complex subunit 3 D PAS_chr1-4_0616 hypothetical protein K12881 THOC4; THO complex subunit 4 D PAS_chr3_0097 Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucle K12881 THOC4; THO complex subunit 4 D PAS_chr4_0942 hypothetical protein K12816 CDC40; pre-mRNA-processing factor 17 D PAS_chr1-4_0414 Splicing factor K12817 PRPF18; pre-mRNA-splicing factor 18 D PAS_chr1-1_0021 hypothetical protein K12819 SLU7; pre-mRNA-processing factor SLU7 D PAS_chr1-4_0118 DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] D PAS_chr1-4_0661 hypothetical protein K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6] D PAS_chr1-3_0129 hypothetical protein K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8] D PAS_chr2-1_0097 Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between th K13126 PABPC; polyadenylate-binding protein D PAS_chr1-4_0283 Poly(A) binding protein, part of the 3'-end RNA-processing complex K13126 PABPC; polyadenylate-binding protein D PAS_chr1-4_0411 Essential protein, component of a complex containing Cef1p K13127 RNF113A; RING finger protein 113A D PAS_chr2-1_0045 hypothetical protein K13130 GEMIN2; gem associated protein 2 D PAS_chr4_0090 Trimethyl guanosine synthase, conserved nucleolar methyl transferase K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-] D PAS_chr1-4_0480 Essential protein with two zinc fingers, present in the nucleus of growing cells K06874 ZPR1; zinc finger protein ZPR1 D PAS_chr2-1_0528 hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1 D PAS_chr4_0140 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] D PAS_chr1-1_0061 ATP-dependent RNA helicase K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D PAS_chr3_0738 Nucleolar DEAD-box protein required for ribosome assembly and function K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D PAS_chr1-4_0297 Suppressor protein STM1 K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein D PAS_chr4_0706 hypothetical protein K13205 AAR2; A1 cistron-splicing factor AAR2 D PAS_chr2-1_0157 hypothetical protein K09528 DNAJC8; DnaJ homolog subfamily C member 8 D PAS_chr2-1_0635 Catalytic subunit of type 1 serine/threonine protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr2-1_0407 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr1-1_0153 Serine/threonine protein phosphatase Z, isoform of Ppz2p K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D PAS_chr2-2_0491 hypothetical protein K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320] D PAS_chr2-2_0444 U1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats K13217 PRPF39; pre-mRNA-processing factor 39 D PAS_chr4_0805 U1 snRNP protein involved in splicing, required for U1 snRNP biogenesis K13217 PRPF39; pre-mRNA-processing factor 39 D PAS_chr3_0329 Subunit of the telomeric Ku complex (Yku70p-Yku80p) K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 D PAS_chr4_0987 hypothetical protein K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] D PAS_chr3_1216 hypothetical protein K24939 CWF19L1; CWF19-like protein 1 C 03011 Ribosome [BR:ppa03011] D PAS_chr1-4_0589 40S ribosomal protein S2 K02981 RP-S2e; small subunit ribosomal protein S2e D PAS_chr1-3_0115 40S ribosomal protein S3 K02985 RP-S3e; small subunit ribosomal protein S3e D PAS_chr4_0524 40S ribosomal protein S1 K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D PAS_chr4_0246 40S ribosomal protein S4 K02987 RP-S4e; small subunit ribosomal protein S4e D PAS_chr3_0762 40S ribosomal protein S5 K02989 RP-S5e; small subunit ribosomal protein S5e D PAS_chr4_0094 40S ribosomal protein S6 K02991 RP-S6e; small subunit ribosomal protein S6e D PAS_FragD_0014 40S ribosomal protein S6 K02991 RP-S6e; small subunit ribosomal protein S6e D PAS_chr4_0211 40S ribosomal protein S7 K02993 RP-S7e; small subunit ribosomal protein S7e D PAS_chr1-1_0439 40S ribosomal protein S8 K02995 RP-S8e; small subunit ribosomal protein S8e D PAS_chr1-4_0422 40S ribosomal protein S9 K02997 RP-S9e; small subunit ribosomal protein S9e D PAS_FragD_0013 40S ribosomal protein S10 K02947 RP-S10e; small subunit ribosomal protein S10e D PAS_chr2-1_0584 40S ribosomal protein S11 K02949 RP-S11e; small subunit ribosomal protein S11e D PAS_chr3_1200 40S ribosomal protein S12 K02951 RP-S12e; small subunit ribosomal protein S12e D PAS_chr4_0456 40S ribosomal protein S13 K02953 RP-S13e; small subunit ribosomal protein S13e D PAS_chr2-1_0481 40S ribosomal protein S14 K02955 RP-S14e; small subunit ribosomal protein S14e D PAS_chr1-4_0491 40S ribosomal protein S15 K02958 RP-S15e; small subunit ribosomal protein S15e D PAS_chr2-1_0482 40S ribosomal protein S22 K02957 RP-S15Ae; small subunit ribosomal protein S15Ae D PAS_chr1-1_0076 40S ribosomal protein S22 K02957 RP-S15Ae; small subunit ribosomal protein S15Ae D PAS_chr4_0414 40S ribosomal protein S16 K02960 RP-S16e; small subunit ribosomal protein S16e D PAS_chr2-1_0779 40S ribosomal protein S17 K02962 RP-S17e; small subunit ribosomal protein S17e D PAS_chr2-1_0783 40S ribosomal protein S18 K02964 RP-S18e; small subunit ribosomal protein S18e D PAS_chr1-4_0353 40S ribosomal protein S19 K02966 RP-S19e; small subunit ribosomal protein S19e D PAS_chr2-2_0257 40S ribosomal protein S20 K02969 RP-S20e; small subunit ribosomal protein S20e D PAS_chr3_0596 40S ribosomal protein S21 K02971 RP-S21e; small subunit ribosomal protein S21e D PAS_chr4_0348 40S ribosomal protein S23 K02973 RP-S23e; small subunit ribosomal protein S23e D PAS_chr4_0292 40S ribosomal protein S24 K02974 RP-S24e; small subunit ribosomal protein S24e D PAS_chr2-2_0326 40S ribosomal protein S25 K02975 RP-S25e; small subunit ribosomal protein S25e D PAS_chr2-1_0362 40S ribosomal protein S26 K02976 RP-S26e; small subunit ribosomal protein S26e D PAS_chr1-1_0283 40S ribosomal protein S27 K02978 RP-S27e; small subunit ribosomal protein S27e D PAS_chr2-1_0634 40S ribosomal protein S27 K02978 RP-S27e; small subunit ribosomal protein S27e D PAS_chr3_0722 ubiquitin-40S ribosomal protein S31 fusion protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PAS_chr1-4_0235 40S ribosomal protein S28 K02979 RP-S28e; small subunit ribosomal protein S28e D PAS_chr3_1174 40S ribosomal protein S28 K02979 RP-S28e; small subunit ribosomal protein S28e D PAS_chr1-4_0504 40S ribosomal protein S29 K02980 RP-S29e; small subunit ribosomal protein S29e D PAS_chr1-4_0471 40S ribosomal protein S0 K02998 RP-SAe; small subunit ribosomal protein SAe D PAS_chr4_0139 60S ribosomal protein L3 K02925 RP-L3e; large subunit ribosomal protein L3e D PAS_chr1-3_0034 60S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e D PAS_chr1-1_0345 60S ribosomal protein L5 K02932 RP-L5e; large subunit ribosomal protein L5e D PAS_chr4_0131 60S ribosomal protein L6 K02934 RP-L6e; large subunit ribosomal protein L6e D PAS_chr2-2_0229 60S ribosomal protein L6 K02934 RP-L6e; large subunit ribosomal protein L6e D PAS_chr3_0038 Nucleolar protein with similarity to large ribosomal subunit L7 proteins K02937 RP-L7e; large subunit ribosomal protein L7e D PAS_chr2-1_0022 60S ribosomal protein L7 K02937 RP-L7e; large subunit ribosomal protein L7e D PAS_chr1-1_0216 60S ribosomal protein L8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PAS_chr1-1_0219 60S ribosomal protein L2 K02938 RP-L8e; large subunit ribosomal protein L8e D PAS_chr4_0107 60S ribosomal protein L2 K02938 RP-L8e; large subunit ribosomal protein L8e D PAS_chr1-1_0382 60S ribosomal protein L9 K02940 RP-L9e; large subunit ribosomal protein L9e D PAS_chr1-1_0236 60S ribosomal protein L9 K02940 RP-L9e; large subunit ribosomal protein L9e D PAS_chr2-2_0054 60S ribosomal protein L10 K02866 RP-L10e; large subunit ribosomal protein L10e D PAS_chr1-1_0183 60S ribosomal protein L1 K02865 RP-L10Ae; large subunit ribosomal protein L10Ae D PAS_chr4_0669 60S ribosomal protein L11 K02868 RP-L11e; large subunit ribosomal protein L11e D PAS_chr1-1_0189 60S ribosomal protein L12 K02870 RP-L12e; large subunit ribosomal protein L12e D PAS_chr4_0413 60S ribosomal protein L13 K02873 RP-L13e; large subunit ribosomal protein L13e D PAS_chr4_0208 60S ribosomal protein L16 K02872 RP-L13Ae; large subunit ribosomal protein L13Ae D PAS_c131_0011 60S ribosomal protein L14 K02875 RP-L14e; large subunit ribosomal protein L14e D PAS_chr2-1_0658 60S ribosomal protein L15 K02877 RP-L15e; large subunit ribosomal protein L15e D PAS_chr2-2_0109 60S ribosomal protein L17 K02880 RP-L17e; large subunit ribosomal protein L17e D PAS_chr1-4_0352 60S ribosomal protein L18 K02883 RP-L18e; large subunit ribosomal protein L18e D PAS_chr3_0054 60S ribosomal protein L20 K02882 RP-L18Ae; large subunit ribosomal protein L18Ae D PAS_chr3_0091 60S ribosomal protein L19 K02885 RP-L19e; large subunit ribosomal protein L19e D PAS_chr1-4_0680 60S ribosomal protein L21 K02889 RP-L21e; large subunit ribosomal protein L21e D PAS_chr4_0041 60S ribosomal protein L22 K02891 RP-L22e; large subunit ribosomal protein L22e D PAS_chr1-3_0300 60S ribosomal protein L23 K02894 RP-L23e; large subunit ribosomal protein L23e D PAS_chr4_0814 60S ribosomal protein L25 K02893 RP-L23Ae; large subunit ribosomal protein L23Ae D PAS_chr2-1_0086 60S ribosomal protein L24 K02896 RP-L24e; large subunit ribosomal protein L24e D PAS_chr2-2_0412 ribosome biogenesis protein RLP24 K02896 RP-L24e; large subunit ribosomal protein L24e D PAS_chr4_0267 60S ribosomal protein L26 K02898 RP-L26e; large subunit ribosomal protein L26e D PAS_chr2-1_0728 60S ribosomal protein L28 K02900 RP-L27Ae; large subunit ribosomal protein L27Ae D PAS_chr4_0374 60S ribosomal protein L29 K02905 RP-L29e; large subunit ribosomal protein L29e D PAS_chr2-1_0087 60S ribosomal protein L30 K02908 RP-L30e; large subunit ribosomal protein L30e D PAS_chr4_0180 60S ribosomal protein L31 K02910 RP-L31e; large subunit ribosomal protein L31e D PAS_chr3_1057 60S ribosomal protein L32 K02912 RP-L32e; large subunit ribosomal protein L32e D PAS_chr1-4_0239 60S ribosomal protein L34 K02915 RP-L34e; large subunit ribosomal protein L34e D PAS_chr1-1_0302 60S ribosomal protein L35 K02918 RP-L35e; large subunit ribosomal protein L35e D PAS_chr1-4_0275 60S ribosomal protein L33 K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D PAS_FragB_0036 60S ribosomal protein L36 K02920 RP-L36e; large subunit ribosomal protein L36e D PAS_chr1-1_0337 60S ribosomal protein L37 K02922 RP-L37e; large subunit ribosomal protein L37e D PAS_chr3_0335 60S ribosomal protein L43 K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D PAS_chr1-4_0412 60S ribosomal protein L38 K02923 RP-L38e; large subunit ribosomal protein L38e D PAS_chr2-1_0483 60S ribosomal protein L39 K02924 RP-L39e; large subunit ribosomal protein L39e D PAS_chr2-1_0486 ubiquitin-60S ribosomal protein L40 fusion protein K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PAS_chr3_0194 60S ribosomal protein L42 K02929 RP-L44e; large subunit ribosomal protein L44e D PAS_chr1-3_0068 60S acidic ribosomal protein P0 K02941 RP-LP0; large subunit ribosomal protein LP0 D PAS_chr4_0412 60S acidic ribosomal protein P1 K02942 RP-LP1; large subunit ribosomal protein LP1 D PAS_chr4_0982 60S acidic ribosomal protein P1 K02942 RP-LP1; large subunit ribosomal protein LP1 D PAS_chr1-4_0490 60S acidic ribosomal protein P2 K02943 RP-LP2; large subunit ribosomal protein LP2 D PAS_c131_0005 mitochondrial 37S ribosomal protein MRP4 K02967 RP-S2; small subunit ribosomal protein S2 D PAS_chr2-2_0377 Mitochondrial ribosomal component of the small subunit K02986 RP-S4; small subunit ribosomal protein S4 D PAS_chr2-2_0086 mitochondrial 37S ribosomal protein MRPS5 K02988 RP-S5; small subunit ribosomal protein S5 D PAS_c131_0014 hypothetical protein K02990 RP-S6; small subunit ribosomal protein S6 D PAS_chr1-1_0098 mitochondrial 37S ribosomal protein RSM7 K02992 RP-S7; small subunit ribosomal protein S7 D PAS_chr1-1_0385 mitochondrial 37S ribosomal protein MRPS8 K02994 RP-S8; small subunit ribosomal protein S8 D PAS_chr3_0946 mitochondrial 37S ribosomal protein RSM10 K02946 RP-S10; small subunit ribosomal protein S10 D PAS_chr4_0813 mitochondrial 37S ribosomal protein YmS18 K02948 RP-S11; small subunit ribosomal protein S11 D PAS_chr3_1120 putative mitochondrial 37S ribosomal protein MRPS12 K02950 RP-S12; small subunit ribosomal protein S12 D PAS_chr3_0520 putative mitochondrial 37S ribosomal protein SWS2 K02952 RP-S13; small subunit ribosomal protein S13 D PAS_chr1-1_0100 mitochondrial 37S ribosomal protein MRP2 K02954 RP-S14; small subunit ribosomal protein S14 D PAS_chr2-1_0384 mitochondrial 37S ribosomal protein MRPS28 K02956 RP-S15; small subunit ribosomal protein S15 D PAS_chr1-4_0320 mitochondrial 37S ribosomal protein MRPS16 K02959 RP-S16; small subunit ribosomal protein S16 D PAS_chr2-1_0683 Mitochondrial ribosomal protein of the small subunit K02961 RP-S17; small subunit ribosomal protein S17 D PAS_chr1-1_0296 Mitochondrial ribosomal protein of the small subunit K02963 RP-S18; small subunit ribosomal protein S18 D PAS_chr3_1117 mitochondrial 37S ribosomal protein RSM19 K02965 RP-S19; small subunit ribosomal protein S19 D PAS_chr2-2_0170 mitochondrial 37S ribosomal protein RSM25 K17402 MRPS23; small subunit ribosomal protein S23 D PAS_chr2-1_0217 Mitochondrial ribosomal protein of the small subunit, has similarity to mammalian apoptosis mediator K17408 DAP3; small subunit ribosomal protein S29 D PAS_chr1-4_0469 mitochondrial 37S ribosomal protein RSM27 K17411 MRPS33; small subunit ribosomal protein S33 D PAS_chr2-2_0487 mitochondrial 37S ribosomal protein RSM24 K17413 MRPS35; small subunit ribosomal protein S35 D PAS_chr1-1_0375 mitochondrial 37S ribosomal protein YmS-T K27290 MRP10; small subunit ribosomal protein MRP10 D PAS_chr2-2_0465 hypothetical protein K17415 MRP21; small subunit ribosomal protein MRP21 D PAS_chr1-4_0600 hypothetical protein K17417 YMR31; small subunit ribosomal protein YMR-31 D PAS_chr3_0474 mitochondrial 54S ribosomal protein MRPL1 K02863 RP-L1; large subunit ribosomal protein L1 D PAS_chr1-1_0192 mitochondrial 54S ribosomal protein RML2 K02886 RP-L2; large subunit ribosomal protein L2 D PAS_chr2-2_0240 mitochondrial 54S ribosomal protein YmL9 K02906 RP-L3; large subunit ribosomal protein L3 D PAS_chr2-1_0890 hypothetical protein K02926 RP-L4; large subunit ribosomal protein L4 D PAS_chr4_0799 mitochondrial 54S ribosomal protein YmL7/YmL5 K02931 RP-L5; large subunit ribosomal protein L5 D PAS_chr2-2_0241 mitochondrial 54S ribosomal protein YmL16 K02933 RP-L6; large subunit ribosomal protein L6 D PAS_chr3_1101 Mitochondrial ribosomal protein of the large subunit K02864 RP-L10; large subunit ribosomal protein L10 D PAS_chr1-3_0107 mitochondrial 54S ribosomal protein YmL19 K02867 RP-L11; large subunit ribosomal protein L11 D PAS_chr1-4_0358 putative mitochondrial 54S ribosomal protein MNP1 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PAS_chr4_0905 mitochondrial 54S ribosomal protein YmL23 K02871 RP-L13; large subunit ribosomal protein L13 D PAS_chr2-2_0417 mitochondrial 54S ribosomal protein YmL10/YmL18 K02876 RP-L15; large subunit ribosomal protein L15 D PAS_chr3_0465 Mitochondrial ribosomal protein of the large subunit K02884 RP-L19; large subunit ribosomal protein L19 D PAS_chr3_0221 mitochondrial 54S ribosomal protein YmL49 K02888 RP-L21; large subunit ribosomal protein L21 D PAS_chr2-1_0126 mitochondrial 54S ribosomal protein YmL41 K02892 RP-L23; large subunit ribosomal protein L23 D PAS_chr4_0956 hypothetical protein K02895 RP-L24; large subunit ribosomal protein L24 D PAS_FragB_0037 54S ribosomal protein L24, mitochondrial K02902 RP-L28; large subunit ribosomal protein L28 D PAS_chr3_0322 Essential type II topoisomerase K02907 RP-L30; large subunit ribosomal protein L30 D PAS_chr4_0845 mitochondrial 54S ribosomal protein YmL32 K02911 RP-L32; large subunit ribosomal protein L32 D PAS_chr3_1135 mitochondrial 54S ribosomal protein YmL39 K02913 RP-L33; large subunit ribosomal protein L33 D PAS_chr3_0473 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34 D PAS_chr1-1_0144 Homolog of the prokaryotic ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PAS_c121_0014 mitochondrial 54S ribosomal protein YmL28 K17421 MRPL40; large subunit ribosomal protein L40 D PAS_chr2-1_0621 mitochondrial 54S ribosomal protein YmL27 K17422 MRPL41; large subunit ribosomal protein L41 D PAS_chr1-4_0171 mitochondrial 54S ribosomal protein MRPL51 K17424 MRPL43; large subunit ribosomal protein L43 D PAS_chr3_0912 Mitochondrial ribosomal protein of the large subunit K17425 MRPL44; large subunit ribosomal protein L44 [EC:3.1.26.-] D PAS_chr2-1_0891 hypothetical protein K17427 MRPL46; large subunit ribosomal protein L46 D PAS_chr2-1_0442 Mitochondrial ribosomal protein of the large subunit K17428 MRPL47; large subunit ribosomal protein L47 D PAS_chr2-2_0074 Mitochondrial ribosomal protein of the small subunit K17430 MRPL49; large subunit ribosomal protein L49 D PAS_chr1-3_0124 mitochondrial 54S ribosomal protein YmL44 K17434 MRPL53; large subunit ribosomal protein L53 D PAS_chr4_0904 mitochondrial 54S ribosomal protein YmL37 K17435 MRPL54; large subunit ribosomal protein L54 D PAS_chr3_0817 Mitochondrial ribosomal protein of the large subunit K17437 MRPL15; large subunit ribosomal protein L15 D PAS_chr4_0644 mitochondrial 54S ribosomal protein YmL25 K17438 MRPL25; large subunit ribosomal protein L25 D PAS_chr4_0895 54S ribosomal protein L35, mitochondrial K17439 MRPL35; large subunit ribosomal protein L35 D PAS_chr3_0958 hypothetical protein K17440 MRP49; large subunit ribosomal protein MRP49 C 03009 Ribosome biogenesis [BR:ppa03009] D PAS_chr4_0808 rRNA methyltransferase NOP1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D PAS_chr1-4_0403 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes K14564 NOP56; nucleolar protein 56 D PAS_chr4_0278 Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis K14565 NOP58; nucleolar protein 58 D PAS_chr3_1041 small nucleolar ribonucleoprotein SNU13 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 D PAS_chr2-2_0149 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D PAS_chr2-1_0648 Protein component of the H/ACA snoRNP pseudouridylase complex K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D PAS_chr4_0796 Nuclear protein related to mammalian high mobility group (HMG) proteins K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D PAS_chr4_0747 Constituent of small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D PAS_chr2-2_0363 Protein required for the assembly of box H/ACA snoRNPs and for pre-rRNA processing K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D PAS_chr2-2_0242 Component of the SSU processome, which is required for pre-18S rRNA processing K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D PAS_chr1-1_0046 Component of the SSU processome, which is required for pre-18S rRNA processing K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D PAS_chr2-1_0861 hypothetical protein K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D PAS_chr2-2_0130 Essential protein involved in maturation of 18S rRNA K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D PAS_chr1-1_0349 Essential protein involved in rRNA processing and ribosome biogenesis K14545 RRP7; ribosomal RNA-processing protein 7 D PAS_chr2-1_0267 Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA K14558 PWP2; periodic tryptophan protein 2 D PAS_chr4_0512 Nucleolar protein, forms a complex with Noc4p K14766 NOP14; nucleolar protein 14 D PAS_chr3_0573 Component of the small (ribosomal) subunit (SSU) processosome required for pre-18S rRNa processing K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D PAS_chr1-1_0199 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D PAS_chr3_0885 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D PAS_chr2-1_0781 Nucleolar protein, component of the small subunit (SSU) processome K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D PAS_chr2-1_0655 Nucleolar protein, component of the small subunit (SSU) processome K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D PAS_chr1-1_0065 Component of the U2 snRNP K14547 UTP8; U3 small nucleolar RNA-associated protein 8 D PAS_chr2-1_0680 hypothetical protein K14551 UTP9; U3 small nucleolar RNA-associated protein 9 D PAS_chr2-2_0045 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D PAS_chr1-4_0642 U3 small nucleolar RNA-associated protein K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D PAS_chr2-1_0606 Nucleolar protein, specifically associated with the U3 snoRNA K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D PAS_chr3_0782 Nucleolar protein, component of the small subunit (SSU) processome K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D PAS_chr4_0667 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D PAS_chr1-4_0640 U3 small nucleolar RNA-associated protein K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D PAS_chr4_0750 hypothetical protein K14770 BUD21; U3 small nucleolar RNA-associated protein 16 D PAS_chr2-1_0222 U3 snoRNP protein, component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRN K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D PAS_chr2-1_0863 hypothetical protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D PAS_chr3_0757 Nucleolar protein, forms a complex with Nop14p K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D PAS_chr1-1_0443 Component of the small-subunit (SSU) processome K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D PAS_chr1-1_0004 U3 small nucleolar RNA-associated protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D PAS_chr4_0831 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D PAS_chr3_0683 Essential nucleolar protein that is a component of the SSU (small subunit) processome K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D PAS_chr3_0131 Essential nucleolar protein that is a component of the SSU (small subunit) processome involved in th K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D PAS_chr2-2_0196 Protein required for cell viability K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D PAS_chr2-2_0106 Possible U3 snoRNP protein K14775 UTP30; ribosome biogenesis protein UTP30 D PAS_chr4_0231 Putative nucleolar DEAD box RNA helicase K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D PAS_chr1-1_0061 ATP-dependent RNA helicase K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D PAS_chr1-1_0292 Protein involved in rRNA processing K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D PAS_chr2-1_0378 Putative ATP-dependent RNA helicase of the DEAD-box family K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D PAS_chr3_0818 ATP-dependent RNA helicase of the DEAD box family K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D PAS_chr1-4_0592 RNA helicase in the DEAH-box family K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D PAS_chr3_0344 Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D PAS_chr3_0672 Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, required for 18S rRNA synthesis K14781 DHR2; ATP-dependent RNA helicase DHR2 [EC:5.6.2.6] D PAS_chr1-4_0461 Nucleolar protein required for maturation of 18S rRNA K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D PAS_chr1-1_0179 Essential conserved nucleolar GTP-binding protein required for synthesis of 40S ribosomal subunits K14569 BMS1; ribosome biogenesis protein BMS1 D PAS_chr4_0127 RNAase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAS_chr4_0987 hypothetical protein K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] D PAS_chr1-4_0262 Alpha' catalytic subunit of casein kinase 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PAS_chr3_0549 Alpha' catalytic subunit of casein kinase 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PAS_chr4_0402 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_chr2-2_0247 Beta' regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_chr3_0292 Essential protein possibly involved in secretion K14782 AATF; protein AATF/BFR2 D PAS_c121_0005 hypothetical protein K14783 CIC1; proteasome-interacting protein CIC1 D PAS_chr3_0910 Putative protein of unknown function that may participate in DNA replication K14784 CMS1; protein CMS1 D PAS_chr1-1_0335 Member of the alpha/beta knot fold methyltransferase superfamily K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D PAS_chr1-4_0539 Essential nucleolar protein involved in pre-18S rRNA processing K14785 ESF2; ESF2/ABP1 family protein D PAS_chr1-4_0098 Essential nucleolar protein required for 40S ribosome biogenesis K14786 KRI1; protein KRI1 D PAS_chr1-1_0331 90S preribosome/SSU processome component KRR1 K06961 KRR1; ribosomal RNA assembly protein D PAS_chr4_0717 Essential conserved protein that is part of the 90S preribosome K14787 MRD1; multiple RNA-binding domain-containing protein 1 D PAS_chr2-2_0360 Essential protein of unknown function K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D PAS_chr4_0185 Nucleolar protein that binds nuclear localization sequences K11294 NCL; nucleolin D PAS_chr1-4_0344 hypothetical protein K14788 NOL10; ribosome biogenesis protein ENP2 D PAS_chr1-3_0112 Putative RNA-binding protein implicated in ribosome biogenesis K14789 NOP6; nucleolar protein 6 D PAS_chr4_0742 Essential component of pre-40S ribosomes K14790 NOP9; nucleolar protein 9 D PAS_chr1-3_0228 Essential protein involved in rRNA and snoRNA maturation K11135 PINX1; Pin2-interacting protein X1 D PAS_chr3_1247 hypothetical protein K14791 PWP1; periodic tryptophan protein 1 D PAS_chr3_0268 RNA terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D PAS_chr3_0065 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both K14792 RRP5; rRNA biogenesis protein RRP5 D PAS_chr3_0207 Protein involved in pre-rRNA processing K14793 RRP9; ribosomal RNA-processing protein 9 D PAS_chr1-4_0319 Protein required for export of the ribosomal subunits K14794 RRP12; ribosomal RNA-processing protein 12 D PAS_chr1-3_0123 hypothetical protein K14795 RRP36; ribosomal RNA-processing protein 36 D PAS_chr1-3_0073 hypothetical protein K14796 TMA23; nucleolar protein TMA23 D PAS_chr3_0240 Essential protein required for biogenesis of 40S (small) ribosomal subunit K11806 DCAF13; DDB1- and CUL4-associated factor 13 D PAS_chr2-1_0219 Protein kinase involved in regulating diverse events including vesicular trafficking, DNA repair, an K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D PAS_chr3_0112 Essential serine kinase involved in cell cycle progression and processing of the 20S pre-rRNA into M K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PAS_chr4_0195 Essential serine kinase involved in the processing of the 20S pre-rRNA into mature 18S rRNA K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D PAS_chr2-1_0615 Essential 18S rRNA dimethylase (dimethyladenosine transferase) K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D PAS_chr3_0466 Protein involved in bud-site selection K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D PAS_chr4_0701 Protein associated with U3 and U14 snoRNAs K14797 ENP1; essential nuclear protein 1 D PAS_chr3_1176 hypothetical protein K14798 LTV1; protein LTV1 D PAS_chr3_1032 Essential nuclear protein involved in proteasome maturation and synthesis of 40S ribosomal subunits K11883 NOB1; RNA-binding protein NOB1 D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_chr2-1_0493 Essential NTPase required for small ribosome subunit synthesis K18532 AK6; adenylate kinase [EC:2.7.4.3] D PAS_chr1-4_0506 Protein required for processing of 20S pre-rRNA in the cytoplasm K14799 TSR1; pre-rRNA-processing protein TSR1 D PAS_chr3_0413 Protein with a potential role in pre-rRNA processing K14800 TSR2; pre-rRNA-processing protein TSR2 D PAS_chr1-4_0115 hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D PAS_chr1-4_0628 hypothetical protein K14801 TSR4; pre-rRNA-processing protein TSR4 D PAS_chr2-2_0243 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus K14290 XPO1; exportin-1 D PAS_chr4_0263 Karyopherin beta, forms a dimeric complex with Srp1p (Kap60p) K14293 KPNB1; importin subunit beta-1 D PAS_chr1-3_0022 Transportin, cytosolic karyopherin beta 2 K18752 TNPO1; transportin-1 D PAS_chr1-1_0409 Karyopherin beta, mediates nuclear import of ribosomal proteins K20221 IPO4; importin-4 D PAS_chr1-3_0237 Karyopherin/importin that interacts with the nuclear pore complex K20222 IPO5; importin-5 D PAS_chr2-1_0677 Karyopherin, a carrier protein involved in nuclear import of proteins K20223 IPO7; importin-7 D PAS_chr3_0883 Nuclear transport factor (karyopherin) K20223 IPO7; importin-7 D PAS_chr1-4_0595 Karyopherin, responsible for nuclear import of Spt15p, histones H2A and H2B, and Nap1p K20224 IPO9; importin-9 D PAS_chr4_0662 Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PAS_chr3_1022 Dual function protein K03245 EIF3J; translation initiation factor 3 subunit J D PAS_chr2-2_0216 Type 2C protein phosphatase K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D PAS_chr2-1_0096 Essential iron-sulfur protein required for ribosome biogenesis and translation initiation K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D PAS_chr4_0201 Essential ATP-dependent RNA helicase of the DEAD-box protein family K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D PAS_chr4_0728 Essential nucleolar protein, putative DEAD-box RNA helicase K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D PAS_chr3_0738 Nucleolar DEAD-box protein required for ribosome assembly and function K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D PAS_chr4_0030 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D PAS_chr3_1118 Essential protein involved in ribosome biogenesis K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D PAS_chr1-4_0356 Putative ATP-dependent RNA helicase of the DEAD-box protein family K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D PAS_chr1-3_0272 Putative ATP-dependent RNA helicase, nucleolar protein K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D PAS_chr4_0966 hypothetical protein K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D PAS_chr2-1_0030 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7] D PAS_chr1-1_0058 GTPase that associates with nuclear 60S pre-ribosomes, required for export of 60S ribosomal subunits K14538 NUG1; nuclear GTP-binding protein D PAS_chr4_0423 Putative GTPase that associates with pre-60S ribosomal subunits in the nucleolus K14537 NUG2; nuclear GTP-binding protein D PAS_chr4_0105 Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus K06943 NOG1; nucleolar GTP-binding protein D PAS_chr1-1_0186 Putative GTPase involved in 60S ribosomal subunit biogenesis K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D PAS_chr1-4_0015 GTPase K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] D PAS_chr3_0202 Protein involved in 5.8S rRNA processing K14812 NGL2; RNA exonuclease NGL2 [EC:3.1.-.-] D PAS_chr3_0681 RNA exonuclease, required for U4 snRNA maturation K13288 orn; oligoribonuclease [EC:3.1.-.-] D PAS_chr1-1_0377 RNA exonuclease K14570 REX1; RNA exonuclease [EC:3.1.-.-] D PAS_chr3_0432 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D PAS_chr3_0846 Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D PAS_chr1-4_0517 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] D PAS_chr1-4_0176 hypothetical protein K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5] D PAS_chr4_0690 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PAS_chr3_0927 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PAS_chr2-1_0295 Subunit of both RNase MRP K14526 POP7; ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5] D PAS_chr4_0566 Subunit of both RNase MRP and nuclear RNase P K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PAS_chr3_1050 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] D PAS_chr2-1_0387 Subunit of RNase MRP K14532 RMP1; ribonuclease MRP protein subunit RMP1 D PAS_chr4_0421 Protein of unknown function, required for cell growth and possibly involved in rRNA processing K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D PAS_chr3_0918 ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D PAS_chr2-1_0105 Shuttling pre-60S factor K14813 ARX1; metalloprotease ARX1 [EC:3.-.-.-] D PAS_chr1-4_0519 Co-chaperone that stimulates the ATPase activity of Ssa1p K09506 DNAJA5; DnaJ homolog subfamily A member 5 D PAS_chr1-3_0101 Constituent of 66S pre-ribosomal particles, has similarity to human translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr1-1_0364 mRNA turnover protein MRT4 K14815 MRT4; mRNA turnover protein 4 D PAS_chr4_0528 mRNA transport regulator, essential nuclear protein K14543 MTR2; mRNA transport regulator MTR2 D PAS_chr2-1_0380 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D PAS_chr4_0394 Poly(A)RNA binding protein involved in nuclear mRNA export K14284 NXF; nuclear RNA export factor D PAS_chr1-4_0507 Zinc finger protein K14816 REI1; pre-60S factor REI1 D PAS_chr1-1_0031 Cytoplasmic pre-60S factor K14816 REI1; pre-60S factor REI1 D PAS_chr1-1_0414 Nuclear protein involved in asymmetric localization of ASH1 mRNA K14817 LOC1; 60S ribosomal subunit assembly/export protein LOC1 D PAS_chr2-1_0410 Essential protein involved in 60S ribosome maturation K14574 SDO1; ribosome maturation protein SDO1 D PAS_chr2-1_0710 ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex K14575 AFG2; AAA family ATPase D PAS_chr4_0082 Essential protein involved in a late step of 60S ribosomal subunit assembly or modification K14818 SQT1; ribosome assembly protein SQT1 D PAS_chr1-3_0193 Protein phosphatase K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] D PAS_chr4_0258 Essential component of the Rix1 complex (with Rix1p and Ipi3p) K14827 IPI1; pre-rRNA-processing protein IPI1 D PAS_chr1-3_0110 Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) K14829 IPI3; pre-rRNA-processing protein IPI3 D PAS_chr1-4_0502 Essential nuclear protein possibly involved in bud formation and morphogenesis K16912 LAS1; ribosomal biogenesis protein LAS1 D PAS_c121_0007 hypothetical protein K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D PAS_chr4_0257 Putative protein of unknown function K24970 TCF25; transcription factor 25 D PAS_chr1-4_0316 hypothetical protein K24971 NEMF; nuclear export mediator factor NEMF D PAS_FragD_0026 ATPase in ER, nuclear membrane and cytosol with homology to mammalian P97 K13525 VCP; transitional endoplasmic reticulum ATPase D PAS_chr1-1_0367 Protein that interacts with Cdc48p and Npl4p, involved in recognition of polyubiquitinated proteins K14016 UFD1; ubiquitin fusion degradation protein 1 D PAS_chr1-1_0119 Zinc finger protein K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 D PAS_chr3_0160 ribosome biogenesis protein BRX1 K14820 BRX1; ribosome biogenesis protein BRX1 D PAS_chr2-2_0055 Protein involved in bud-site selection K14821 BUD20; bud site selection protein 20 D PAS_chr1-3_0056 hypothetical protein K14822 CGR1; rRNA-processing protein CGR1 D PAS_chr2-2_0099 Essential protein required for the maturation of 25S rRNA and 60S ribosomal subunit assembly K14823 EBP2; rRNA-processing protein EBP2 D PAS_chr1-4_0664 hypothetical protein K14824 ERB1; ribosome biogenesis protein ERB1 D PAS_chr2-2_0476 hypothetical protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D PAS_chr1-1_0446 Protein involved in an early, nucleolar step of 60S ribosomal subunit biogenesis K14830 MAK11; protein MAK11 D PAS_chr4_0661 66S preribosome component MAK16 K14831 MAK16; protein MAK16 D PAS_chr3_0094 Constituent of 66S pre-ribosomal particles, required for large (60S) ribosomal subunit biogenesis K14832 MAK21; ribosome biogenesis protein MAK21 D PAS_chr1-1_0187 Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex K14572 MDN1; midasin D PAS_chr1-4_0211 ribosome biogenesis protein NIP7 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D PAS_chr4_0930 hypothetical protein K14833 NOC2; nucleolar complex protein 2 D PAS_chr3_0684 Protein that forms a nuclear complex with Noc2p that binds to 66S ribosomal precursors K14834 NOC3; nucleolar complex protein 3 D PAS_chr2-2_0379 Probable RNA m(5)C methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D PAS_chr3_0212 Nucleolar protein K14573 NOP4; nucleolar protein 4 D PAS_chr3_1036 Nucleolar protein required for 60S ribosomal subunit biogenesis K14836 NOP8; nucleolar protein 8 D PAS_chr1-4_0493 Nucleolar protein, required for pre-25S rRNA processing K14837 NOP12; nucleolar protein 12 D PAS_chr4_0952 hypothetical protein K14838 NOP15; nucleolar protein 15 D PAS_chr2-1_0234 Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis K14839 NOP16; nucleolar protein 16 D PAS_chr3_0903 Nucleolar protein K14840 NOP53; nucleolar protein 53 D PAS_chr2-1_0725 Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis K14841 NSA1; ribosome biogenesis protein NSA1 D PAS_chr2-2_0129 ribosome biogenesis protein NSA2 K14842 NSA2; ribosome biogenesis protein NSA2 D PAS_chr4_0716 Nucleolar protein involved in rRNA processing and 60S ribosomal subunit biogenesis K14843 PES1; pescadillo D PAS_chr1-4_0277 Nuclear protein that binds to and stabilizes the exoribonuclease Rat1p K14845 RAI1; RAT1-interacting protein D PAS_chr2-1_0694 Acyltransferase that catalyzes diacylglycerol esterification K14828 RIX1; pre-rRNA-processing protein RIX1 D PAS_chr4_0419 Putative ATPase of the AAA family K14571 RIX7; ribosome biogenesis ATPase D PAS_chr4_0803 Nucleolar protein involved in the assembly of the large ribosomal subunit K14846 RPF1; ribosome production factor 1 D PAS_chr3_0991 Essential protein involved in the processing of pre-rRNA and the assembly of 60S ribosomal subunit K14847 RPF2; ribosome production factor 2 D PAS_chr4_0537 Essential nuclear protein involved in early steps of ribosome biogenesis K14848 RRB1; ribosome assembly protein RRB1 D PAS_chr1-1_0022 Essential conserved nucleolar protein necessary for biogenesis of 60S ribosomal subunits K14849 RRP1; ribosomal RNA-processing protein 1 D PAS_chr1-4_0328 Ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D PAS_chr3_1103 Component of the pre-60S pre-ribosomal particle K14851 RRP17; ribosomal RNA-processing protein 17 D PAS_chr1-1_0088 Essential protein that binds ribosomal protein L11 K14852 RRS1; regulator of ribosome biosynthesis D PAS_FragB_0030 hypothetical protein K14853 RSA1; ribosome assembly protein 1 D PAS_chr4_0547 hypothetical protein K14854 RSA3; ribosome assembly protein 3 D PAS_chr1-4_0276 WD-repeat protein involved in ribosome biogenesis K14855 RSA4; ribosome assembly protein 4 D PAS_chr1-4_0311 Highly conserved nuclear protein required for actin cytoskeleton organization K14856 SDA1; protein SDA1 D PAS_chr4_0464 AdoMet-dependent methyltransferase involved in rRNA processing and 60S ribosomal subunit maturation K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D PAS_chr1-1_0291 Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D PAS_chr1-3_0178 hypothetical protein K14860 TMA16; translation machinery-associated protein 16 D PAS_chr1-4_0285 Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNA K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D PAS_chr1-3_0151 Nucleolar protein required for normal metabolism of the rRNA primary transcript K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D PAS_chr1-3_0188 Constituent of 66S pre-ribosomal particles, required for maturation of the large ribosomal subunit K14863 WDR12; ribosome biogenesis protein D PAS_chr2-2_0440 Protein of unknown function, required for growth at high temperature K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 D PAS_chr4_0301 Essential protein involved in nuclear export of Mss4p K15262 BCP1; protein BCP1 D PAS_chr1-4_0005 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein D PAS_chr2-2_0167 Putative protein of unknown function with seven beta-strand methyltransferase motif K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] D PAS_chr3_0789 Ribose methyltransferase K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] D PAS_chr1-1_0182 Mitochondrial 2' O-ribose methyltransferase, required for methylation of U(2791) in 21S rRNA K15508 MRM2; 21S rRNA (uridine2791-2'-O)-methyltransferase [EC:2.1.1.168] D PAS_chr4_0729 Putative protein of unknown function K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] D PAS_chr4_0582 Putative protein of unknown function K19307 BMT5; 25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313] D PAS_chr3_0142 Putative protein of unknown function K19308 BMT6; 25S rRNA (uracil2843-N3)-methyltransferase [EC:2.1.1.312] D PAS_chr3_0175 hypothetical protein K26736 PA2G4; ERBB-3 binding protein D PAS_chr2-2_0249 Cell-wall L-asparaginase II, involved in asparagine catabolism K19828 MTG1; mitochondrial GTPase 1 D PAS_chr2-1_0832 hypothetical protein K03979 obgE; GTPase [EC:3.6.5.-] D PAS_chr2-1_0213 hypothetical protein K19829 GEP3; genetic interactor of prohibitins 3, mitochondrial D PAS_chr3_0724 hypothetical protein K15265 PUS5; 21S rRNA pseudouridine2819 synthase [EC:5.4.99.43] D PAS_FragD_0015 Mitochondrial RNA polymerase specificity factor K15267 MTEF1; mitochondrial transcription factor 1 D PAS_chr3_0616 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family K18803 HPM1; protein-histidine N-methyltransferase [EC:2.1.1.85] D PAS_chr4_0476 Ribosomal protein lysine methyltransferase K27349 RKM2; ribosomal lysine N-methyltransferase 2 [EC:2.1.1.-] D PAS_chr1-1_0216 60S ribosomal protein L8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PAS_chr1-4_0326 Protein required for respiratory growth K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PAS_chr1-4_0087 hypothetical protein K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:ppa03016] D PAS_chr1-4_0517 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] D PAS_chr1-4_0176 hypothetical protein K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5] D PAS_chr4_0690 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PAS_chr3_0927 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PAS_chr2-1_0295 Subunit of both RNase MRP K14526 POP7; ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5] D PAS_chr4_0566 Subunit of both RNase MRP and nuclear RNase P K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PAS_chr3_1050 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] D PAS_chr2-1_0185 Protein subunit of mitochondrial RNase P, has roles in nuclear transcription, cytoplasmic and mitoch K14533 RPM2; ribonuclease P protein component, mitochondrial [EC:3.1.26.5] D PAS_chr3_0969 tRNase Z, involved in RNA processing K00784 rnz; ribonuclease Z [EC:3.1.26.11] D PAS_chr2-1_0204 RNAse K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D PAS_chr2-1_0176 ATP (CTP):tRNA-specific tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D PAS_chr2-2_0157 Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16] D PAS_chr2-2_0460 hypothetical protein K15323 TSEN34; tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16] D PAS_chr1-1_0137 hypothetical protein K15325 SEN15; tRNA-splicing endonuclease subunit Sen15, fungi type D PAS_chr2-2_0250 Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54 D PAS_chr4_0312 tRNA 2'-phosphotransferase K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160] D PAS_chr3_0622 tRNA ligase, required for tRNA splicing K14679 TRL1; tRNA ligase [EC:6.5.1.3] D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_chr2-1_0617 Nuclear pore protein involved in nuclear export of pre-tRNA K14288 XPOT; exportin-T D PAS_chr2-2_0243 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus K14290 XPO1; exportin-1 D PAS_chr4_0654 Karyopherin involved in nuclear import and export K14289 XPO5; exportin-5 D PAS_FragB_0052 Translational elongation factor EF-1 alpha K03231 EEF1A; elongation factor 1-alpha D PAS_chr1-1_0065 Component of the U2 snRNP K14547 UTP8; U3 small nucleolar RNA-associated protein 8 D PAS_chr4_0200 Cytoplasmic component of the nuclear aminoacylation-dependent tRNA export pathway K08876 SCYL1; SCY1-like protein 1 D PAS_chr2-1_0137 Nuclear import receptor, mediates the nuclear localization of proteins involved in mRNA-nucleus expo K15436 TRPO3; transportin-3 D PAS_chr1-1_0241 Mitochondrial glutamyl-tRNA synthetase, encoded by a nuclear gene K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr1-4_0598 Glutamyl-tRNA synthetase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr2-2_0209 Protein with similarity to tRNA synthetases K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAS_chr1-1_0391 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAS_chr2-1_0123 Mitochondrial isoleucyl-tRNA synthetase, null mutant is deficient in respiratory growth K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAS_chr4_0709 isoleucine-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAS_chr4_0393 Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAS_chr1-4_0534 Mitochondrial leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAS_chr2-1_0396 Mitochondrial methionyl-tRNA synthetase (MetRS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAS_chr2-1_0346 Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAS_chr3_0285 Glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAS_chr3_0166 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAS_chr3_0949 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAS_chr1-1_0047 Mitochondrial lysine-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAS_chr1-4_0095 Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAS_chr4_0101 Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAS_chr2-1_0731 Protein that binds tRNA and methionyl-and glutamyl-tRNA synthetases (Mes1p and Gus1p) K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1 D PAS_chr2-1_0314 Protein that binds tRNA and methionyl-and glutamyl-tRNA synthetases (Mes1p and Gus1p) K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1 D PAS_chr3_0462 Cytoplasmic alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAS_chr1-1_0390 Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAS_chr1-1_0392 Mitochondrial asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAS_chr3_0376 Cytoplasmic and mitochondrial glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PAS_chr2-1_0673 Mitochondrial threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAS_chr2-2_0238 Threonyl-tRNA synthetase, essential cytoplasmic protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAS_chr1-4_0463 Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAS_chr1-4_0104 Probable mitochondrial seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAS_chr1-4_0514 hypothetical protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAS_chr3_0754 Mitochondrial and cytoplasmic valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAS_chr1-3_0244 Cytoplasmic and mitochondrial histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAS_chr1-4_0558 Mitochondrial phenylalanyl-tRNA synthetase alpha subunit, active as a monomer K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAS_chr4_0276 Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAS_chr3_0144 Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate ac K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAS_chr4_0522 Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAS_chr3_1110 Mitochondrial tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAS_chr3_0165 Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates tryptophanyl-tRNA K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAS_chr2-2_0245 Mitochondrial tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAS_chr1-4_0399 D-Tyr-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PAS_chr1-3_0204 hypothetical protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D PAS_chr2-1_0170 tRNA-specific adenosine deaminase, deaminates adenosine-37 to inosine in tRNA-Ala K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34] D PAS_chr2-1_0388 Subunit of tRNA-specific adenosine-34 deaminase K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-] D PAS_chr2-1_0374 Subunit of tRNA-specific adenosine-34 deaminase K15442 TAD3; tRNA-specific adenosine deaminase 3 D PAS_FragB_0019 tRNA-dihydrouridine synthase 1 K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88] D PAS_chr1-4_0247 Dihydrouridine synthase, member of a family of dihydrouridine synthases K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91] D PAS_chr4_0178 Dihydrouridine synthase K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89] D PAS_chr4_0179 Dihydrouridine synthase K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90] D PAS_chr2-1_0090 tRNA methyltransferase, localizes to both the nucleus and mitochondrion to produce the modified base K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D PAS_chr3_0593 tRNA methyltransferase K15331 TRMT2B; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D PAS_chr4_0445 S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] D PAS_chr3_0632 tRNA(m(1)G37)methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PAS_chr3_0443 Subunit of tRNA (1-methyladenosine) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D PAS_chr3_1122 Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit D PAS_chr3_0947 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of nucleotides K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205] D PAS_chr3_1100 Subunit of a tRNA methyltransferase complex composed of Trm8p and Trm82p K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D PAS_chr2-1_0406 tRNA methyltransferase, catalyzes esterification of modified uridine nucleotides in tRNAs K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229] D PAS_chr1-1_0230 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221] D PAS_chr1-4_0354 Catalytic subunit of an adoMet-dependent tRNA methyltransferase complex (Trm11p-Trm112p) K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214] D PAS_chr2-1_0523 2'-O-methyltransferase responsible for modification of tRNA at position 4 K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225] D PAS_chr3_0213 tRNA(Ser) Um(44) 2'-O-methyltransferase K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211] D PAS_chr1-1_0467 hypothetical protein K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 D PAS_chr1-4_0374 Subunit of an adoMet-dependent tRNA methyltransferase (MTase) complex (Trm11p-Trm112p) K15448 TRM112; multifunctional methyltransferase subunit TRM112 D PAS_chr4_0460 Nonessential protein that binds actin filaments and localizes to actin patches and cables K17053 ABP140; tRNAThr (cytosine32-N3)-methyltransferase [EC:2.1.1.268] D PAS_chr2-2_0212 S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114] D PAS_chr1-4_0655 tRNA wybutosine-synthesizing protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D PAS_chr1-4_0457 tRNA methyltransferase required for the synthesis of wybutosine K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231] D PAS_chr1-4_0212 tRNA:pseudouridine synthase, introduces pseudouridines at positions 26-28, 34-36, 65, and 67 of tRNA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PAS_chr1-3_0271 Non-essential tRNA:pseudouridine synthase K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45] D PAS_chr2-1_0067 Pseudouridine synthase, catalyzes only the formation of pseudouridine-55 (Psi55), a highly conserved K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PAS_chr2-1_0777 Mitochondrial tRNA pseudouridine synthase involved in pseudouridylation of mitochondrial tRNAs K15453 PUS6; tRNA pseudouridine31 synthase [EC:5.4.99.42] D PAS_chr3_1088 Pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D PAS_chr1-3_0239 DRAP deaminase, catalyzes the third step of the riboflavin biosynthesis pathway K14655 RIB2; tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:5.4.99.28] D PAS_chr1-4_0029 tRNA-specific 2-thiouridylase, responsible for 2-thiolation of the wobble base of mitochondrial tRNA K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] D PAS_chr3_0775 Protein required for thiolation of the uridine at the wobble position of Gln, Lys, and Glu tRNAs K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-] D PAS_chr2-2_0373 Protein with a role in urmylation and in invasive and pseudohyphal growth K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2 D PAS_chr3_0037 Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAS_chr2-1_0393 Ubiquitin-like protein with weak sequence similarity to ubiquitin K12161 URM1; ubiquitin related modifier 1 D PAS_chr2-1_0563 Protein that activates Urm1p before its conjugation to proteins (urmylation) K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11] D PAS_chr2-1_0347 Protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D PAS_chr2-1_0167 Putative metalloprotease, similar to O-sialoglycoprotein metallopeptidase from P. haemolytica K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D PAS_chr2-1_0085 Putative glycoprotease proposed to be in transcription as a component of the EKC protein complex wit K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D PAS_c121_0011 hypothetical protein K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121 D PAS_chr4_0249 Proposed transcription factor K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1 D PAS_chr2-2_0121 Protein proposed to be involved in the modification of N-linked oligosaccharides K15903 GON7; EKC/KEOPS complex subunit GON7 D PAS_chr2-2_0263 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA K11373 ELP1; elongator complex protein 1 D PAS_chr4_0778 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA K11374 ELP2; elongator complex protein 2 D PAS_chr4_0098 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D PAS_chr2-1_0284 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA K11375 ELP4; elongator complex protein 4 D PAS_chr4_0558 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA K11376 ELP5; elongator complex protein 5 D PAS_chr2-1_0281 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA K11377 ELP6; elongator complex protein 6 D PAS_chr1-1_0438 Zn-ribbon protein K15455 DPH3; diphthamide biosynthesis protein 3 D PAS_chr1-4_0637 Protein kti12 K15456 KTI12; protein KTI12 D PAS_chr1-1_0239 Protein required, with Elongator complex, Kti11p & Kti12p, for modification of wobble nucleosides in K15462 KTI13; protein ATS1 D PAS_chr2-1_0219 Protein kinase involved in regulating diverse events including vesicular trafficking, DNA repair, an K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D PAS_chr3_0217 Type 2A-related serine-threonine phosphatase K15427 SIT4; serine/threonine-protein phosphatase PP1-1 [EC:3.1.3.16] D PAS_chr4_0541 Protein that forms a complex with the Sit4p protein phosphatase and is required for its function K15458 SAP185_190; SIT4-associating protein SAP185/190 D PAS_chr1-3_0135 Protein that forms a complex with the Sit4p protein phosphatase K15458 SAP185_190; SIT4-associating protein SAP185/190 D PAS_chr1-4_0326 Protein required for respiratory growth K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PAS_chr1-3_0185 Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PAS_chr1-4_0563 Mitochondrial protein, forms a heterodimer complex with Mto1p K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D PAS_chr3_0908 Mitochondrial protein, forms a heterodimer complex with Mss1p K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PAS_chr2-1_0283 Putative tRNA acetyltransferase K06963 TAN1; tRNA acetyltransferase TAN1 D PAS_chr1-4_0323 tRNAHis guanylyltransferase K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79] D PAS_chr4_0401 Arginyl-tRNA-protein transferase K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8] D PAS_chr4_0229 Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p) K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] D PAS_chr2-2_0239 RING finger protein that interacts with the arginine methyltransferase Hmt1p K12597 AIR1_2; protein AIR1/2 D PAS_chr3_0432 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D PAS_chr3_0846 Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D PAS_chr2-1_0547 Bisphosphate-3'-nucleotidase, involved in salt tolerance and methionine biogenesis K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PAS_chr4_0708 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D PAS_chr2-2_0277 Protein of unknown function, localized to the mitochondrial outer membrane K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase C 03012 Translation factors [BR:ppa03012] D PAS_chr2-1_0741 Translation initiation factor eIF1A K03236 EIF1A; translation initiation factor 1A D PAS_chr4_0880 Translation initiation factor eIF1 K03113 EIF1; translation initiation factor 1 D PAS_chr3_0077 Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start K03237 EIF2S1; translation initiation factor 2 subunit 1 D PAS_chr1-4_0135 Beta subunit of the translation initiation factor eIF2 K03238 EIF2S2; translation initiation factor 2 subunit 2 D PAS_chr3_0839 Gamma subunit of the translation initiation factor eIF2 K03242 EIF2S3; translation initiation factor 2 subunit 3 D PAS_chr2-2_0058 Eukaryotic initiation factor (eIF) 2A K15026 EIF2A; translation initiation factor 2A D PAS_chr4_0032 Alpha subunit of the translation initiation factor eIF2B K03239 EIF2B1; translation initiation factor eIF-2B subunit alpha D PAS_chr3_0564 Beta subunit of the translation initiation factor eIF2B K03754 EIF2B2; translation initiation factor eIF-2B subunit beta D PAS_chr4_0386 Gamma subunit of the translation initiation factor eIF2B K03241 EIF2B3; translation initiation factor eIF-2B subunit gamma D PAS_chr2-2_0275 Delta subunit of the translation initiation factor eIF2B K03680 EIF2B4; translation initiation factor eIF-2B subunit delta D PAS_chr3_0391 Catalytic epsilon subunit of the translation initiation factor eIF2B K03240 EIF2B5; translation initiation factor eIF-2B subunit epsilon D PAS_chr3_0476 Protein of unknown function that associates with ribosomes K15027 EIF2D; translation initiation factor 2D D PAS_chr4_0771 Translation initiation factor eIF-5 K03262 EIF5; translation initiation factor 5 D PAS_chr3_1048 Translation initiation factor eIF-5A, promotes formation of the first peptide bond K03263 EIF5A; translation initiation factor 5A D PAS_chr1-1_0254 GTPase K03243 EIF5B; translation initiation factor 5B D PAS_chr1-3_0101 Constituent of 66S pre-ribosomal particles, has similarity to human translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D PAS_chr3_0340 Subunit of the core complex of translation initiation factor 3(eIF3) K03254 EIF3A; translation initiation factor 3 subunit A D PAS_chr3_0701 Subunit of the core complex of translation initiation factor 3(eIF3), essential for translation K03253 EIF3B; translation initiation factor 3 subunit B D PAS_chr3_0774 Subunit of the eukaryotic translation initiation factor 3 (eIF3) K03252 EIF3C; translation initiation factor 3 subunit C D PAS_chr3_0747 hypothetical protein K03251 EIF3D; translation initiation factor 3 subunit D D PAS_chr1-4_0147 eukaryotic translation initiation factor 3 subunit K03250 EIF3E; translation initiation factor 3 subunit E D PAS_chr1-4_0289 hypothetical protein K03249 EIF3F; translation initiation factor 3 subunit F D PAS_chr4_0434 Subunit of the core complex of translation initiation factor 3(eIF3) K03248 EIF3G; translation initiation factor 3 subunit G D PAS_chr3_0948 hypothetical protein K03247 EIF3H; translation initiation factor 3 subunit H D PAS_chr1-3_0281 Subunit of the core complex of translation initiation factor (eIF3) K03246 EIF3I; translation initiation factor 3 subunit I D PAS_chr3_1022 Dual function protein K03245 EIF3J; translation initiation factor 3 subunit J D PAS_chr2-2_0120 hypothetical protein K15030 EIF3M; translation initiation factor 3 subunit M D PAS_chr3_0595 Translation initiation factor eIF4A, identical to Tif1p K03257 EIF4A; translation initiation factor 4A D PAS_chr1-4_0461 Nucleolar protein required for maturation of 18S rRNA K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D PAS_chr3_1054 Translation initiation factor eIF-4B, has RNA annealing activity K03258 EIF4B; translation initiation factor 4B D PAS_chr3_0972 Cytoplasmic mRNA cap binding protein K03259 EIF4E; translation initiation factor 4E D PAS_chr1-1_0053 Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) K03260 EIF4G; translation initiation factor 4G D PAS_chr1-3_0179 hypothetical protein K03261 CAF20; cap-associated protein CAF20 D PAS_chr2-1_0244 Mitochondrial translation initiation factor 2 K02519 infB; translation initiation factor IF-2 D PAS_chr3_1044 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn1p K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D PAS_chr3_0925 eIF3 component of unknown function K03255 TIF31; protein TIF31 D PAS_chr2-1_0603 Putative helicase with limited sequence similarity to human Rb protein K13026 DHX57; ATP-dependent RNA helicase DHX57 [EC:5.6.2.6] D PAS_chr2-1_0618 hypothetical protein K15908 EAP1; protein EAP1 D PAS_FragB_0052 Translational elongation factor EF-1 alpha K03231 EEF1A; elongation factor 1-alpha D PAS_chr2-1_0376 Putative GTPase, member of the Obg family K03232 EEF1B; elongation factor 1-beta D PAS_chr4_0102 elongation factor 1 gamma domain-containing protein K03233 EEF1G; elongation factor 1-gamma D PAS_chr3_1071 Translation elongation factor EF-1 gamma K03233 EEF1G; elongation factor 1-gamma D PAS_chr1-4_0226 hypothetical protein K03233 EEF1G; elongation factor 1-gamma D PAS_chr2-1_0812 hypothetical protein K03234 EEF2; elongation factor 2 D PAS_chr4_0038 Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes K03235 EF3; elongation factor 3 D PAS_chr3_0728 ATP binding cassette family member K03235 EF3; elongation factor 3 D PAS_chr3_0562 Mitochondrial translation elongation factor Tu K02358 tuf; elongation factor Tu D PAS_chr2-2_0409 Mitochondrial elongation factor involved in translational elongation K02355 fusA; elongation factor G D PAS_chr4_0033 Mitochondrial elongation factor involved in translational elongation K02355 fusA; elongation factor G D PAS_chr4_0072 Protein required, along with Dph2p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D PAS_chr2-1_0594 Protein required, along with Dph1p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide K17866 DPH2; diphthamide biosynthesis protein 2 D PAS_chr1-1_0438 Zn-ribbon protein K15455 DPH3; diphthamide biosynthesis protein 3 D PAS_chr2-1_0803 Protein of unknown function, contains a J-domain K17867 DPH4; diphthamide biosynthesis protein 4 D PAS_chr2-1_0577 Methyltransferase required for synthesis of diphthamide K00586 DPH5; diphthine methyl ester synthase [EC:2.1.1.314] D PAS_chr4_0132 Putative protein of unknown function K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D PAS_chr2-1_0734 Putative protein of unknown function K17868 DPH7; diphthine methyl ester acylhydrolase [EC:3.1.1.97] D PAS_chr1-4_0602 N(6)-adenine-specific DNA methyltransferase K22855 EEF1AKMT1; EEF1A lysine methyltransferase 1 [EC:2.1.1.-] D PAS_chr4_0615 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family K22856 EEF1AKMT2; EEF1A lysine methyltransferase 2 [EC:2.1.1.-] D PAS_chr3_1002 Putative nicotinamide N-methyltransferase K17878 NNT1; EEF1A N-terminal glycine/lysine methyltransferase [EC:2.1.1.-] D PAS_chr3_0558 Putative protein of unknown function K22696 EEF2KMT; protein-lysine N-methyltransferase EEF2KMT [EC:2.1.1.-] D PAS_chr4_0727 Polypeptide release factor involved in translation termination K03265 ETF1; peptide chain release factor subunit 1 D PAS_chr3_0398 Translation termination factor eRF3 K03267 ERF3; peptide chain release factor subunit 3 D PAS_chr2-1_0503 hypothetical protein K15033 ICT1; peptidyl-tRNA hydrolase ICT1 [EC:3.1.1.29] D PAS_chr3_1249 hypothetical protein K02835 prfA; peptide chain release factor 1 D PAS_chr4_0253 Mitochondrial ribosome recycling factor K02838 frr; ribosome recycling factor D PAS_chr2-1_0179 S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family K19589 N6AMT1; release factor glutamine methyltransferase [EC:2.1.1.297] D PAS_chr1-4_0374 Subunit of an adoMet-dependent tRNA methyltransferase (MTase) complex (Trm11p-Trm112p) K15448 TRM112; multifunctional methyltransferase subunit TRM112 D PAS_chr2-2_0138 One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA hydrolases K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D PAS_chr2-2_0218 One of two (see also PTH1) mitochondrially-localized peptidyl-tRNA hydrolases K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:ppa03110] D PAS_chr1-3_0063 Molecular chaperone of the endoplasmic reticulum lumen K09486 HYOU1; hypoxia up-regulated 1 D PAS_chr1-3_0102 Heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PAS_chr2-1_0324 Oligomeric mitochondrial matrix chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PAS_chr3_0928 Mitochondrial ATP-binding protein, possibly a mitochondrial chaperone with non-proteolytic function K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PAS_chr1-4_0130 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr2-1_0140 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding I K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10] D PAS_chr3_0365 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr3_0402 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr2-1_0113 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol K09493 CCT1; T-complex protein 1 subunit alpha D PAS_chr4_0121 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09494 CCT2; T-complex protein 1 subunit beta D PAS_chr2-2_0402 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09495 CCT3; T-complex protein 1 subunit gamma D PAS_chr3_0571 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09496 CCT4; T-complex protein 1 subunit delta D PAS_chr2-1_0555 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09497 CCT5; T-complex protein 1 subunit epsilon D PAS_chr4_0513 Subunit of the cytosolic chaperonin Cct ring complex K09498 CCT6; T-complex protein 1 subunit zeta D PAS_chr2-1_0079 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of K09499 CCT7; T-complex protein 1 subunit eta D PAS_chr3_0300 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09500 CCT8; T-complex protein 1 subunit theta D PAS_chr4_0158 Tetradecameric mitochondrial chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAS_chr2-2_0066 Protein chaperone involved in regulation of the HSP90 and HSP70 functions K09503 DNAJA2; DnaJ homolog subfamily A member 2 D PAS_chr3_0480 Putative chaperone, homolog of E. coli DnaJ, closely related to Ydj1p K09503 DNAJA2; DnaJ homolog subfamily A member 2 D PAS_chr1-4_0519 Co-chaperone that stimulates the ATPase activity of Ssa1p K09506 DNAJA5; DnaJ homolog subfamily A member 5 D PAS_chr2-2_0151 Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p K09510 DNAJB4; DnaJ homolog subfamily B member 4 D PAS_chr1-1_0086 Co-chaperone for Hsp40p, anchored in the ER membrane K09518 DNAJB12; DnaJ homolog subfamily B member 12 D PAS_chr2-1_0282 Cytosolic ribosome-associated chaperone K09522 DNAJC2; DnaJ homolog subfamily C member 2 D PAS_chr2-2_0015 One of several homologs of bacterial chaperone DnaJ, located in the ER lumen K09523 DNAJC3; DnaJ homolog subfamily C member 3 D PAS_chr2-1_0157 hypothetical protein K09528 DNAJC8; DnaJ homolog subfamily C member 8 D PAS_chr4_0417 hypothetical protein K09529 DNAJC9; DnaJ homolog subfamily C member 9 D PAS_chr1-3_0089 Protein chaperone involved in regulation of the HSP90 and HSP70 functions K09537 DNAJC17; DnaJ homolog subfamily C member 17 D PAS_chr2-2_0413 J-protein co-chaperone of the mitochondrial import motor K09539 DNAJC19; DnaJ homolog subfamily C member 19 D PAS_chr2-1_0691 Constituent of the mitochondrial import motor associated with the presequence translocase K09539 DNAJC19; DnaJ homolog subfamily C member 19 D PAS_chr4_0395 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K09540 SEC63; translocation protein SEC63 D PAS_chr2-2_0323 Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p K03686 dnaJ; molecular chaperone DnaJ D PAS_chr4_0353 Specialized J-protein that functions with Hsp70 in Fe-S cluster biogenesis in mitochondria K04082 hscB; molecular chaperone HscB D PAS_chr1-4_0272 GrpE protein homolog, mitochondrial K03687 GRPE; molecular chaperone GrpE D PAS_chr1-4_0163 hypothetical protein K04078 groES; chaperonin GroES D PAS_chr2-1_0833 hypothetical protein K09549 PFDN2; prefoldin subunit 2 D PAS_chr1-1_0405 Subunit of the heterohexameric cochaperone prefoldin complex K09550 PFDN4; prefoldin subunit 4 D PAS_chr2-1_0194 Subunit of the heterohexameric cochaperone prefoldin complex which binds specifically to cytosolic C K04797 pfdA; prefoldin alpha subunit D PAS_chr1-4_0405 Subunit of the heterohexameric Gim/prefoldin protein complex K04798 pfdB; prefoldin beta subunit D PAS_chr2-1_0322 Calnexin K08054 CANX; calnexin D PAS_chr1-4_0649 Mitochondrial respiratory chain complexes assembly protein RCA1 K08956 AFG3; AFG3 family protein [EC:3.4.24.-] D PAS_chr4_0856 Component, with Yta12p, of the mitochondrial inner membrane m-AAA protease K08956 AFG3; AFG3 family protein [EC:3.4.24.-] D PAS_chr2-1_0518 Hsp90 cochaperone, interacts with the Ssa group of the cytosolic Hsp70 chaperones K09553 STIP1; stress-induced-phosphoprotein 1 D PAS_chr2-1_0828 hypothetical protein K09554 CDC37; cell division cycle protein 37 D PAS_chr2-1_0042 Hsp70 (Ssa1p) nucleotide exchange factor, cytosolic homolog of Sil1p, which is the nucleotide exchan K09562 HSPBP1; hsp70-interacting protein D PAS_chr1-1_0486 hypothetical protein K23327 HIKESHI; protein Hikeshi D PAS_chr3_0470 hypothetical protein K21804 METTL21A; protein N-lysine methyltransferase METTL21A [EC:2.1.1.-] D PAS_chr2-1_0320 Protein containing a UCS (UNC-45/CRO1/SHE4) domain K21991 UNC45; protein unc-45 D PAS_chr1-4_0113 hypothetical protein K16365 SGTA; small glutamine-rich tetratricopeptide repeat-containing protein alpha D PAS_chr2-1_0849 hypothetical protein K24927 TTC4; tetratricopeptide repeat protein 4 D PAS_chr3_0464 Putative protein of unknown function K24962 CCDC47; PAT complex subunit CCDC47 D PAS_chr1-4_0072 Co-chaperone that binds to Hsp82p and activates its ATPase activity K26216 AHSA1; activator of Hsp90 ATPase protein 1 D PAS_chr1-4_0548 Vacuolar proteinase B (YscB), a serine protease of the subtilisin family K01336 PRB1; cerevisin [EC:3.4.21.48 3.4.21.-] D PAS_chr1-1_0226 Vacuolar proteinase B (YscB), a serine protease of the subtilisin family K01336 PRB1; cerevisin [EC:3.4.21.48 3.4.21.-] D PAS_chr1-4_0251 hypothetical protein K14644 OSW3; subtilase-type proteinase RRT12 [EC:3.4.21.-] D PAS_chr2-1_0304 Kex2 proprotein convertase K01341 KEX2; kexin [EC:3.4.21.61] D PAS_chr1-4_0013 carboxypeptidase Y K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5] D PAS_chr4_0584 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor K06009 YPS1_2; yapsin 1/2 [EC:3.4.23.41] D PAS_chr1-1_0267 Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D PAS_chr4_0545 Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D PAS_chr3_0567 Peptidyl-prolyl cis-trans isomerase (cyclophilin) K05864 PPID; peptidyl-prolyl isomerase D [EC:5.2.1.8] D PAS_chr3_0378 Peptidyl-prolyl cis-trans isomerase (cyclophilin) K05864 PPID; peptidyl-prolyl isomerase D [EC:5.2.1.8] D PAS_chr1-3_0129 hypothetical protein K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8] D PAS_chr2-2_0375 Peptidyl-prolyl cis-trans isomerase (PPIase), binds to the drugs FK506 and rapamycin K09568 FKBP1; FK506-binding protein 1 [EC:5.2.1.8] D PAS_c131_0001 hypothetical protein K09569 FKBP2; FK506-binding protein 2 [EC:5.2.1.8] D PAS_chr2-2_0381 Peptidylprolyl-cis/trans-isomerase (PPIase) K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] D PAS_chr4_0284 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system K03671 TXN; thioredoxin D PAS_chr4_0725 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system K03671 TXN; thioredoxin D PAS_chr3_0670 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system K03671 TXN; thioredoxin D PAS_chr4_0840 Cytoplasmic glutaredoxin, thioltransferase, glutathione-dependent disulfide oxidoreductase K03676 grxC; glutaredoxin 3 D PAS_chr1-4_0207 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase K07390 grxD; monothiol glutaredoxin D PAS_chr4_0844 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1] D PAS_chr1-1_0160 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr1-3_0125 Member of the protein disulfide isomerase (PDI) family K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr4_0991 hypothetical protein K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr2-1_0421 ER protein with chaperone and co-chaperone activity, involved in retention of resident ER proteins K13996 EPS1; protein disulfide-isomerase [EC:5.3.4.1] C 04131 Membrane trafficking [BR:ppa04131] D PAS_chr4_0548 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16944 SEPT7; septin 7 D PAS_chr1-4_0069 Protein kinase with similarity to mammalian phosphoinositide-dependent kinase 1 (PDK1) K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1] D PAS_chr4_0700 Phospholipase C K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11] D PAS_chr3_0646 Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D PAS_chr1-1_0457 Phosphatidylinositol-4-phosphate 5-kinase K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68] D PAS_c131_0004 hypothetical protein K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1] D PAS_chr1-1_0057 Putative protein serine/threonine kinase expressed at the end of meiosis K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1] D PAS_chr2-2_0059 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAS_chr3_0347 Serine/threonine protein kinase involved in regulation of exocytosis K19852 KIN1_2; serine/threonine protein kinase KIN1/2 [EC:2.7.11.1] D PAS_chr1-1_0170 N-myristoylated calcium-binding protein that may have a role in intracellular signaling K19932 NCS1; neuronal calcium sensor D PAS_chr3_0143 Secretory vesicle-associated Rab GTPase essential for exocytosis K07901 RAB8A; Ras-related protein Rab-8A D PAS_chr2-1_0758 Calmodulin K02183 CALM; calmodulin D PAS_chr2-2_0435 hypothetical protein K02183 CALM; calmodulin D PAS_chr2-2_0014 Guanyl-nucleotide exchange factor for the small G-protein Sec4p K19940 SEC2; Rab guanine nucleotide exchange factor SEC2 D PAS_chr4_0134 Sm-like protein involved in docking and fusion of exocytic vesicles K15292 STXBP1; syntaxin-binding protein 1 D PAS_chr1-4_0066 Effector of Rab GTPase Sec4p, forms a complex with Sec4p and t-SNARE Sec9p K08518 STXBP5; syntaxin-binding protein 5 D PAS_FragB_0076 hypothetical protein K19952 RABIF; guanine nucleotide exchange factor D PAS_chr2-1_0074 GTPase-activating protein for Sec4p and several other Rab GTPases, regulates exocytosis via its acti K19953 GRTP1; TBC1 domain family member 6 D PAS_chr3_0801 Cytoplasmic GTPase-activating protein for Ypt/Rab transport GTPases Ypt6p, Ypt31p and Sec4p K19951 TBC1D8_9; TBC1 domain family member 8/9 D PAS_chr2-2_0186 Peroxisomal membrane signal receptor for the C-terminal tripeptide signal sequence (PTS1) K13342 PEX5; peroxin-5 D PAS_chr3_0586 Rab escort protein, forms a complex with the Ras-like small GTPase Ypt1p K23460 CHM; Rab proteins geranylgeranyltransferase component A D PAS_chr4_0741 Alpha subunit of Type II geranylgeranyltransferase K14050 RABGGTA; geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60] D PAS_chr3_0764 Beta subunit of Type II geranylgeranyltransferase K05956 RABGGTB; geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60] D PAS_chr2-1_0345 Subunit of the RAVE complex (Rav1p, Rav2p, Skp1p), which promotes assembly of the V-ATPase holoenzym K24155 DMXL; rabconnectin-3a D PAS_chr2-1_0112 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04393 CDC42; cell division control protein 42 D PAS_chr1-3_0113 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04392 RAC1; Ras-related C3 botulinum toxin substrate 1 D PAS_chr1-4_0550 hypothetical protein K19983 EXOC1; exocyst complex component 1 D PAS_chr3_1229 hypothetical protein K17637 EXOC2; exocyst complex component 2 D PAS_chr1-4_0452 Essential 88kDa subunit of the exocyst complex K06110 EXOC3; exocyst complex component 3 D PAS_chr2-1_0039 Essential 121kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p K06111 EXOC4; exocyst complex component 4 D PAS_chr1-4_0334 Essential 100kDa subunit of the exocyst complex K19984 EXOC5; exocyst complex component 5 D PAS_chr2-1_0297 Essential 113kDa subunit of the exocyst complex K19985 EXOC6; exocyst complex component 6 D PAS_chr4_0695 Essential 70kDa subunit of the exocyst complex K07195 EXOC7; exocyst complex component 7 D PAS_chr4_0078 Essential protein with dual roles in spliceosome assembly and exocytosis K19986 EXOC8; exocyst complex component 8 D PAS_chr4_0299 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 D PAS_chr4_0115 Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments K17945 TPM1_2; tropomyosin, fungi type D PAS_chr4_0675 Component of the exomer complex, which also contains Csh6p, Bch1p, Bch2p, and Bud7p K19877 CHS5; chitin biosynthesis protein CHS5 D PAS_chr4_0542 Member of the ChAPs family of proteins (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p) K19880 CHS6; Chs5-Arf1p-binding protein CHS6/BCH2 D PAS_chr2-1_0141 Member of the ChAPs family (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms th K19881 BUD7; Chs5-Arf1p-binding protein BUD7/BCH1 D PAS_chr3_0529 hypothetical protein K19992 MSO1; protein MSO1 D PAS_chr2-1_0830 hypothetical protein K12481 RBSN; rabenosyn-5 D PAS_chr2-2_0077 Putative phosphatidylinositol transfer protein (PITP) K19996 SFH5; phosphatidylinositol transfer protein SFH5 D PAS_chr1-4_0294 Plasma membrane t-SNARE involved in fusion of secretory vesicles at the plasma membrane K08486 STX1B_2_3; syntaxin 1B/2/3 D PAS_chr2-2_0350 Target membrane receptor (t-SNARE) K21155 VAM3; syntaxin VAM3 D PAS_chr3_1238 hypothetical protein K08489 STX16; syntaxin 16 D PAS_chr1-4_0024 cis-Golgi t-SNARE syntaxin required for vesicular transport between the ER and the Golgi complex K08490 STX5; syntaxin 5 D PAS_chr3_0989 t-SNARE required for ER membrane fusion and vesicular traffic K08492 STX18; syntaxin 18 D PAS_chr3_1085 Protein involved in cis-Golgi membrane traffic K08493 VTI1; vesicle transport through interaction with t-SNAREs 1 D PAS_chr2-1_0161 v-SNARE protein involved in Golgi transport, homolog of the mammalian protein GOS-28/GS28 K08495 GOSR1; golgi SNAP receptor complex member 1 D PAS_chr2-2_0453 hypothetical protein K08496 GOSR2; golgi SNAP receptor complex member 2 D PAS_chr1-4_0462 Membrane glycoprotein V-SNARE K08497 SEC20; protein transport protein SEC20 D PAS_chr3_0048 Essential t-SNARE that forms a complex with Tlg2p and Vti1p and mediates fusion of endosome-derived K08499 TLG1; member of the syntaxin family of t-SNAREs D PAS_chr1-1_0246 hypothetical protein K08501 STX8; syntaxin 8 D PAS_chr1-4_0500 hypothetical protein K08502 VAM7; regulator of vacuolar morphogenesis D PAS_chr1-3_0161 Type II membrane protein required for vesicular transport K08504 BET1; blocked early in transport 1 D PAS_chr1-1_0481 hypothetical protein K08507 USE1; unconventional SNARE in the endoplasmic reticulum protein 1 D PAS_chr2-2_0132 t-SNARE protein important for fusion of secretory vesicles with the plasma membrane K19950 SEC9; protein transport protein SEC9 D PAS_FragB_0011 Synaptobrevin homolog 2 K08513 VAMP4; vesicle-associated membrane protein 4 D PAS_chr2-1_0099 hypothetical protein K08515 VAMP7; vesicle-associated membrane protein 7 D PAS_FragB_0006 Synaptobrevin homolog YKT6 K08516 YKT6; synaptobrevin homolog YKT6 D PAS_chr3_0274 R-SNARE protein K08517 SEC22; vesicle transport protein SEC22 D PAS_chr4_0251 Hydrophilic protein, involved in vesicle trafficking between the ER and Golgi K19998 SCFD1; sec1 family domain-containing protein 1 D PAS_chr1-4_0126 Palmitoyltransferase for Vac8p, required for vacuolar membrane fusion K20028 ZDHHC2_15_20; palmitoyltransferase ZDHHC2/15/20 [EC:2.3.1.225] D PAS_chr2-1_0056 Palmitoyltransferase that acts on the SNAREs Snc1p, Syn8p, Tlg1p and likely on all SNAREs K20003 ZDHHC4; palmitoyltransferase ZDHHC4 [EC:2.3.1.225] D PAS_chr2-1_0829 hypothetical protein K20032 ZDHHC13_17; palmitoyltransferase ZDHHC13/17 [EC:2.3.1.225] D PAS_chr3_0342 ATPase required for the release of Sec17p K06027 NSF; vesicle-fusing ATPase [EC:3.6.4.6] D PAS_chr2-1_0644 Peripheral membrane protein required for vesicular transport between ER and Golgi K15296 NAPA; alpha-soluble NSF attachment protein D PAS_chr2-1_0389 Sorting nexin K17919 SNX4; sorting nexin-4 D PAS_chr2-2_0030 Sorting nexin family member K21996 SNX41_42; sorting nexin-41/42 D PAS_chr3_1139 Sorting nexin K21996 SNX41_42; sorting nexin-41/42 D PAS_chr3_0108 Protein required for Golgi localization of glycosyltransferases K15620 GOLPH3; golgi phosphoprotein 3 D PAS_FragD_0026 ATPase in ER, nuclear membrane and cytosol with homology to mammalian P97 K13525 VCP; transitional endoplasmic reticulum ATPase D PAS_chr2-1_0159 UBX (ubiquitin regulatory X) domain-containing protein that regulates Glc7p phosphatase activity and K14012 NSFL1C; UBX domain-containing protein 1 D PAS_FragB_0007 Protein VTS1 K27407 VTS1; RNA-binding protein VTS1 D PAS_chr1-4_0546 Clathrin heavy chain, subunit of the major coat protein K04646 CLTC; clathrin heavy chain D PAS_chr3_0751 Dynamin-related GTPase K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5] D PAS_chr2-1_0496 Alpha-adaptin, large subunit of the clathrin associated protein complex (AP-2) K11824 AP2A; AP-2 complex subunit alpha D PAS_chr3_0079 Beta-adaptin, large subunit of the clathrin associated protein complex (AP-2) K11825 AP2B1; AP-2 complex subunit beta-1 D PAS_chr2-2_0175 Mu2-like subunit of the clathrin associated protein complex (AP-2) K11826 AP2M1; AP-2 complex subunit mu-1 D PAS_chr3_1047 Small subunit of the clathrin-associated adaptor complex AP-2 K11827 AP2S1; AP-2 complex subunit sigma-1 D PAS_chr3_0865 Protein with a potential role in actin cytoskeletal organization K20042 FCHO; F-BAR domain only protein D PAS_chr1-4_0244 Epsin-like protein involved in endocytosis and actin patch assembly K12471 EPN; epsin D PAS_FragB_0073 hypothetical protein K12471 EPN; epsin D PAS_chr4_0763 Protein containing an N-terminal epsin-like domain K12471 EPN; epsin D PAS_chr2-1_0651 Key endocytic protein involved in a network of interactions with other endocytic proteins K12472 EPS15; epidermal growth factor receptor substrate 15 D PAS_chr2-2_0405 Protein involved in clathrin cage assembly K20044 PICALM; phosphatidylinositol-binding clathrin assembly protein D PAS_chr2-1_0116 Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) K12562 AMPH; amphiphysin D PAS_chr3_0498 Actin-associated protein K12562 AMPH; amphiphysin D PAS_chr3_0983 Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) K12562 AMPH; amphiphysin D PAS_chr2-1_0366 Cytoskeletal protein binding protein required for assembly of the cortical actin cytoskeleton K20046 SLA1; actin cytoskeleton-regulatory complex protein SLA1 D PAS_chr3_0694 Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p K20047 PAN1; actin cytoskeleton-regulatory complex protein PAN1 D PAS_chr4_0920 hypothetical protein K20048 END3; actin cytoskeleton-regulatory complex protein END3 D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr2-1_0255 Protein of unknown function involved in maintenance of proper telomere length K20059 LDB19; arrestin-related trafficking adapter 1 D PAS_chr1-3_0216 hypothetical protein K20060 ECM21; arrestin-related trafficking adapter 2/8 D PAS_chr4_0694 Cytoplasmic protein of unknown function that interacts with the cyclin Pcl7p K20061 ALY1_2; arrestin-related trafficking adapter 3/6 D PAS_chr3_0930 Membrane protein K20062 ART4_5_7; arrestin-related trafficking adapter 4/5/7 D PAS_chr3_1017 Putative protein of unknown function K20062 ART4_5_7; arrestin-related trafficking adapter 4/5/7 D PAS_chr4_0184 hypothetical protein K20063 RIM8; arrestin-related trafficking adapter 9 D PAS_chr2-1_0178 Polyphosphatidylinositol phosphatase, dephosphorylates multiple phosphatidylinositols K20279 SYNJ; synaptojanin [EC:3.1.3.36] D PAS_chr2-1_0424 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sa K20279 SYNJ; synaptojanin [EC:3.1.3.36] D PAS_chr2-1_0460 Protein serine/threonine kinase K08853 AAK; AP2-associated kinase [EC:2.7.11.1] D PAS_chr2-1_0028 Putative kinase, suppressor of GTPase mutant, similar to bovine rhodopsin kinase K17541 SCYL2; SCY1-like protein 2 D PAS_chr2-1_0354 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26] D PAS_chr4_0879 Transmembrane actin-binding protein involved in membrane cytoskeleton assembly and cell polarization K20040 HIP1R; huntingtin-interacting protein 1-related protein D PAS_chr2-1_0322 Calnexin K08054 CANX; calnexin D PAS_chr2-1_0124 Elongation factor 2 (EF-2), also encoded by EFT1 K02677 PRKCA; classical protein kinase C alpha type [EC:2.7.11.13] D PAS_chr2-2_0087 ADP-ribosylation factor, GTPase of the Ras superfamily K07937 ARF1_2; ADP-ribosylation factor 1/2 D PAS_chr4_0214 Glucose-repressible ADP-ribosylation factor K07941 ARF6; ADP-ribosylation factor 6 D PAS_chr3_0150 GTP-binding protein of the rho subfamily of Ras-like proteins, involved in establishment of cell pol K04513 RHOA; Ras homolog gene family, member A D PAS_chr4_0618 One of two type I myosins K10356 MYO1; myosin I D PAS_chr4_0680 GTP-binding protein K07827 KRAS; GTPase KRas D PAS_chr3_0133 GTP-binding protein of the ras superfamily required for bud site selection K07827 KRAS; GTPase KRas D PAS_chr4_0478 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137] D PAS_chr3_0990 Nexin-1 homolog required for localizing membrane proteins K17917 SNX1_2; sorting nexin-1/2 D PAS_chr1-4_0384 Amphiphysin-like lipid raft protein K20120 BIN3; bridging integrator 3 D PAS_chr3_0833 Amphiphysin-like lipid raft protein K20120 BIN3; bridging integrator 3 D PAS_chr4_0215 SH3 domain protein implicated in the regulation of actin polymerization K20121 FNBP1; formin-binding protein 1 D PAS_chr4_0681 GTPase-activating protein (RhoGAP) for Rho3p and Rho4p K20643 RGD1; Rho GTPase-activating protein RGD1 D PAS_chr1-4_0162 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5 K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0219 GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr3_0203 Guanine nucleotide exchange factor K20131 RABGEF1; Rab5 GDP/GTP exchange factor D PAS_chr3_0042 Myristoylated serine/threonine protein kinase involved in vacuolar protein sorting K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1] D PAS_chr1-1_0150 Protein of the Sec1p/Munc-18 family, essential for vacuolar protein sorting K12479 VPS45; vacuolar protein sorting-associated protein 45 D PAS_chr1-4_0340 ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector K12486 SMAP; stromal membrane-associated protein D PAS_chr3_1109 Protein that localizes to the nucleus and is involved in transcription regulation K12486 SMAP; stromal membrane-associated protein D PAS_chr1-3_0100 Phosphatidylinositol-4-kinase that functions in the Pkc1p protein kinase pathway K00888 PI4KA; phosphatidylinositol 4-kinase A [EC:2.7.1.67] D PAS_chr1-3_0180 hypothetical protein K21842 EFR3; protein EFR3 D PAS_chr3_0536 hypothetical protein K21845 YPP1; cargo-transport protein YPP1 D PAS_chr4_0899 GTP-binding protein K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr2-1_0669 GTPase K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr1-4_0503 Endosomal subunit of membrane-associated retromer complex required for retrograde transport K18468 VPS35; vacuolar protein sorting-associated protein 35 D PAS_chr3_1146 hypothetical protein K18467 VPS29; vacuolar protein sorting-associated protein 29 D PAS_chr4_0074 Vacuolar protein sorting protein K18466 VPS26A_B; vacuolar protein sorting-associated protein 26A/B D PAS_chr3_0450 Alpha 4 subunit of the 20S proteasome K02731 PSMA7; 20S proteasome subunit alpha 4 [EC:3.4.25.1] D PAS_c121_0003 hypothetical protein K18469 TBC1D5; TBC1 domain family member 5 D PAS_chr1-3_0254 GTPase-activating protein for yeast Rab family members K20168 TBC1D15; TBC1 domain family member 15 D PAS_chr2-1_0527 hypothetical protein K07955 ARL8; ADP-ribosylation factor-like protein 8 D PAS_chr3_0234 Catalytic subunit of N-terminal acetyltransferase of the NatC type K00670 NAA30; N-alpha-acetyltransferase 30 [EC:2.3.1.256] D PAS_chr1-1_0190 Non-catalytic subunit of N-terminal acetyltransferase of the NatC type K20823 NAA35; N-alpha-acetyltransferase 35, NatC auxiliary subunit D PAS_chr3_0780 hypothetical protein K20824 NAA38; N-alpha-acetyltransferase 38, NatC auxiliary subunit D PAS_FragB_0049 Vacuolar protein sorting-associated protein 27 K12182 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate D PAS_c131_0007 hypothetical protein K04705 STAM; signal transducing adaptor molecule D PAS_chr3_0136 Component of the ESCRT-I complex, which is involved in ubiquitin-dependent sorting of proteins into K12183 TSG101; ESCRT-I complex subunit TSG101 D PAS_chr2-1_0182 Component of the ESCRT-I complex (Stp22p, Srn2p, Vps28p, and Mvb12p), which is involved in ubiquitin K12184 VPS28; ESCRT-I complex subunit VPS28 D PAS_chr3_1165 hypothetical protein K12188 SNF8; ESCRT-II complex subunit VPS22 D PAS_chr4_0993 hypothetical protein K12189 VPS25; ESCRT-II complex subunit VPS25 D PAS_chr3_0312 Component of the ESCRT-II complex K12190 VPS36; ESCRT-II complex subunit VPS36 D PAS_chr1-4_0657 Vacuolar protein sorting protein K12197 CHMP1; charged multivesicular body protein 1 D PAS_c131_0013 hypothetical protein K12191 CHMP2A; charged multivesicular body protein 2A D PAS_chr1-1_0034 vacuolar sorting protein K12193 VPS24; charged multivesicular body protein 3 D PAS_chr1-4_0023 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III) K12194 CHMP4A_B; charged multivesicular body protein 4A/B D PAS_chr3_0168 Cytoplasmic and vacuolar membrane protein involved in late endosome to vacuole transport K12198 CHMP5; charged multivesicular body protein 5 D PAS_chr4_0420 Myristoylated subunit of ESCRTIII K12195 CHMP6; charged multivesicular body protein 6 D PAS_chr1-3_0288 hypothetical protein K15053 CHMP7; charged multivesicular body protein 7 D PAS_chr2-1_0572 AAA-type ATPase that is regulated by Vta1p K12196 VPS4; vacuolar protein-sorting-associated protein 4 D PAS_chr4_0635 hypothetical protein K12199 VTA1; vacuolar protein sorting-associated protein VTA1 D PAS_chr1-3_0184 Protein involved in proteolytic activation of Rim101p in response to alkaline pH K12200 PDCD6IP; programmed cell death 6-interacting protein D PAS_chr3_1175 hypothetical protein K20177 VPS3; vacuolar protein sorting-associated protein 3 D PAS_chr1-4_0606 Membrane-associated protein K20178 VPS8; vacuolar protein sorting-associated protein 8 D PAS_chr1-3_0306 hypothetical protein K20179 VPS11; vacuolar protein sorting-associated protein 11 D PAS_chr3_0210 Subunit of the vacuole fusion and protein sorting HOPS complex and the CORVET tethering complex K20180 VPS16; vacuolar protein sorting-associated protein 16 D PAS_chr2-1_0574 Component of CORVET tethering complex K20181 VPS18; vacuolar protein sorting-associated protein 18 D PAS_chr2-2_0264 ATP-binding protein that is A subunit of the HOPS complex and the CORVET tethering complex K20182 VPS33A; vacuolar protein sorting-associated protein 33A D PAS_chr1-1_0460 hypothetical protein K20183 VPS39; Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 D PAS_chr4_0062 Vacuolar membrane protein K20184 VPS41; vacuolar protein sorting-associated protein 41 D PAS_chr3_0390 Subunit of RAVE (Rav1p, Rav2p, Skp1p) K25485 RAV2; regulator of V-ATPase in vacuolar membrane protein 2 D PAS_chr3_1258 hypothetical protein K03094 SKP1; S-phase kinase-associated protein 1 D PAS_FragB_0027 AP-3 complex subunit delta K12396 AP3D; AP-3 complex subunit delta D PAS_chr2-2_0415 Beta3-like subunit of the yeast AP-3 complex K12397 AP3B; AP-3 complex subunit beta D PAS_chr2-1_0788 Mu3-like subunit of the clathrin associated protein complex (AP-3) K12398 AP3M; AP-3 complex subunit mu D PAS_chr3_0122 Small subunit of the clathrin-associated adaptor complex AP-3, which is involved in vacuolar protein K12399 AP3S; AP-3 complex subunit sigma D PAS_chr4_0296 hypothetical protein K22240 CNL1; biogenesis of lysosome-related organelles complex 1 subunit CNL1 D PAS_chr4_0611 hypothetical protein K22241 SNN1; biogenesis of lysosome-related organelles complex 1 subunit SNN1 D PAS_FragB_0026 hypothetical protein K22243 KXD1; biogenesis of lysosome-related organelles complex 1 subunit KXD1 D PAS_chr3_1107 Protein required for fusion of cvt-vesicles and autophagosomes with the vacuole K20195 MON1; vacuolar fusion protein MON1 D PAS_chr4_0614 hypothetical protein K21156 CCZ1; vacuolar fusion protein CCZ1, fungi type D PAS_chr1-3_0261 Ubiquitin isopeptidase K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12] D PAS_chr2-2_0056 hypothetical protein K11866 STAMBP; STAM-binding protein [EC:3.4.19.12] D PAS_chr1-4_0644 Dynamin-like GTPase required for vacuolar sorting K23481 VPS1; vacuolar protein sorting-associated protein 1 D PAS_chr3_0606 PProtein homologous to human Chediak-Higashi syndrome and murine Beige proteins K24781 BPH1; beige protein homolog 1 D PAS_chr1-4_0528 GTPase of the Ypt/Rab family, very similar to Ypt31p K07905 RAB11B; Ras-related protein Rab-11B D PAS_chr1-1_0471 hypothetical protein K20241 WDR44; WD repeat-containing protein 44 D PAS_chr1-3_0057 Component of both the Nup84 nuclear pore sub-complex and of the COPII complex K14004 SEC13; protein transport protein SEC13 D PAS_FragB_0038 GTPase-activating protein K20242 EVI5; ecotropic viral integration site 5 protein D PAS_chr3_0904 Strand exchange protein, forms a helical filament with DNA that searches for homology K04482 RAD51; DNA repair protein RAD51 D PAS_chr1-3_0031 Golgi-associated retrograde protein K20298 VPS52; vacuolar protein sorting-associated protein 52 D PAS_chr3_0301 Component of the GARP (Golgi-associated retrograde protein) complex K20299 VPS53; vacuolar protein sorting-associated protein 53 D PAS_c131_0006 hypothetical protein K10364 CAPZA; F-actin-capping protein subunit alpha D PAS_chr3_0548 Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) K10365 CAPZB; F-actin-capping protein subunit beta D PAS_chr4_0165 GTPase, Ras-like GTP binding protein involved in the secretory pathway K07893 RAB6A; Ras-related protein Rab-6A D PAS_chr2-1_0682 hypothetical protein K20286 TMF1; TATA element modulatory factor D PAS_chr4_0389 Large subunit of the dynactin complex K04648 DCTN1; dynactin 1 D PAS_chr1-1_0211 Putative vacuolar protein sorting-associated protein vps13 K19525 VPS13A_C; vacuolar protein sorting-associated protein 13A/C D PAS_chr2-2_0316 Soluble GTPase with a role in regulation of membrane traffic K07942 ARL1; ADP-ribosylation factor-like protein 1 D PAS_chr2-2_0078 GTPase of the Ras superfamily required to recruit Arl1p to the Golgi K07952 ARFRP1; ADP-ribosylation factor related protein 1 D PAS_chr3_0974 ADP-ribosylation factor GTPase activating protein (ARF GAP), involved in ER-Golgi transport K12492 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 D PAS_chr3_0559 ADP-ribosylation factor GTPase activating protein (ARF GAP) K12493 ARFGAP2_3; ADP-ribosylation factor GTPase-activating protein 2/3 D PAS_chr1-4_0667 hypothetical protein K18442 ARFGEF; brefeldin A-inhibited guanine nucleotide-exchange protein D PAS_chr1-4_0432 Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs) K18443 GBF1; golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 D PAS_chr3_0206 hypothetical protein K20289 COG2; conserved oligomeric Golgi complex subunit 2 D PAS_chr4_0916 hypothetical protein K20290 COG3; conserved oligomeric Golgi complex subunit 3 D PAS_chr1-1_0250 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p) K20291 COG4; conserved oligomeric Golgi complex subunit 4 D PAS_chr4_0073 Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p) K20293 COG6; conserved oligomeric Golgi complex subunit 6 D PAS_chr2-2_0228 hypothetical protein K20295 COG8; conserved oligomeric Golgi complex subunit 8 D PAS_chr4_0693 hypothetical protein K20297 VPS51; vacuolar protein sorting-associated protein 51 D PAS_chr1-1_0314 Component of the GARP (Golgi-associated retrograde protein) complex K17600 VPS54; vacuolar protein sorting-associated protein 54 D PAS_chr2-2_0224 Component of the TRAPP (transport protein particle) complex K20300 TRAPPC1; trafficking protein particle complex subunit 1 D PAS_chr2-1_0476 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates K20301 TRAPPC2; trafficking protein particle complex subunit 2 D PAS_chr1-3_0080 Hydrophilic protein that acts in conjunction with SNARE proteins K20302 TRAPPC3; trafficking protein particle complex subunit 3 D PAS_chr2-2_0180 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi K20303 TRAPPC4; trafficking protein particle complex subunit 4 D PAS_chr1-3_0091 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi K20280 TRAPPC5; trafficking protein particle complex subunit 5 D PAS_chr3_1098 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi K20304 TRAPPC6; trafficking protein particle complex subunit 6 D PAS_chr2-1_0774 Subunit of TRAPP (transport protein particle) K20305 TRAPPC8; trafficking protein particle complex subunit 8 D PAS_chr2-1_0811 hypothetical protein K20306 TRAPPC9; trafficking protein particle complex subunit 9 D PAS_chr2-1_0532 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi K20307 TRAPPC10; trafficking protein particle complex subunit 10 D PAS_chr2-2_0374 hypothetical protein K20308 TRAPPC11; trafficking protein particle complex subunit 11 D PAS_chr4_0721 hypothetical protein K20311 TRS65; trafficking protein particle complex II-specific subunit 65 D PAS_chr4_0371 hypothetical protein K20312 TCA17; TRAPP-associated protein TCA17 D PAS_chr2-1_0537 Gamma-adaptin, large subunit of the clathrin-associated protein (AP-1) complex K12391 AP1G1; AP-1 complex subunit gamma-1 D PAS_chr1-4_0010 Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex K12392 AP1B1; AP-1 complex subunit beta-1 D PAS_chr4_0852 Mu1-like medium subunit of the clathrin-associated protein complex (AP-1) K12393 AP1M; AP-1 complex subunit mu D PAS_chr1-4_0112 Mu1-like medium subunit of the clathrin-associated protein complex (AP-1) K12393 AP1M; AP-1 complex subunit mu D PAS_chr1-3_0140 Small subunit of the clathrin-associated adaptor complex AP-1 K12394 AP1S1_2; AP-1 complex subunit sigma 1/2 D PAS_chr4_0297 Golgi-localized protein with homology to gamma-adaptin K12404 GGA; ADP-ribosylation factor-binding protein GGA D PAS_chr2-2_0037 AP-1 accessory protein K24814 HEATR5; HEAT repeat-containing protein 5 D PAS_chr3_1215 hypothetical protein K20318 SYS1; protein SYS1 D PAS_chr2-2_0062 Putative protein of unknown function K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D PAS_chr1-1_0423 hypothetical protein K23542 TMEM199; TMEM199 family protein D PAS_chr1-1_0493 hypothetical protein K23543 CCDC115; coiled-coil domain-containing protein 115 D PAS_chr2-1_0793 Vacuolar membrane protein of unknown function that is conserved in mammals K23544 SERINC1; serine incorporator 1 D PAS_chr3_0639 Sorting nexin K17918 SNX3_12; sorting nexin-3/12 D PAS_chr3_0269 Protein required for sorting proteins to the vacuole K17922 SNX8; sorting nexin-8 D PAS_chr2-1_0066 Peripheral membrane protein with a role in endocytosis and vacuole integrity, interacts with Arl1p A K26678 MON2; protein MON2 D PAS_chr2-1_0180 Protein of unknown function, essential for viability K26680 DOP1; protein dopey D PAS_chr2-1_0104 hypothetical protein K26750 TVP15; golgi apparatus membrane protein TVP15 D PAS_chr2-1_0239 Integral membrane protein localized to late Golgi vesicles along with the V-SNARE Tlg2p K26751 TVP18; golgi apparatus membrane protein TVP18 D PAS_chr2-2_0091 Integral membrane protein localized to late Golgi vesicles along with the V-SNARE Tlg2p K26752 TVP23; golgi apparatus membrane protein TVP23 D PAS_chr4_0758 Integral membrane protein localized to late Golgi vesicles along with the V-SNARE Tlg2p K26753 TVP38; golgi apparatus membrane protein TVP38 D PAS_chr1-1_0180 GTPase; GTP-binding protein of the ARF family, component of COPII coat of vesicles K07953 SAR1; GTP-binding protein SAR1 [EC:3.6.5.-] D PAS_chr1-4_0231 Essential phosphoprotein component (p150) of the COPII coat of secretory pathway vesicles K14005 SEC31; protein transport protein SEC31 D PAS_chr1-1_0048 GTPase-activating protein K14006 SEC23; protein transport protein SEC23 D PAS_chr4_0600 GTPase-activating protein K14006 SEC23; protein transport protein SEC23 D PAS_chr4_0484 Member of the Sec24p family K14007 SEC24; protein transport protein SEC24 D PAS_chr3_0614 Component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat K14007 SEC24; protein transport protein SEC24 D PAS_chr4_0606 Guanine nucleotide exchange factor (GEF) K14003 PREB; prolactin regulatory element-binding protein D PAS_chr2-1_0564 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA K20346 TMED4_9_11; p24 family protein alpha D PAS_chr2-1_0633 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles K20347 TMED2; p24 family protein beta-1 D PAS_chr3_1259 hypothetical protein K20352 TMED10; p24 family protein delta-1 D PAS_chr4_0844 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1] D PAS_chr1-1_0160 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr1-3_0125 Member of the protein disulfide isomerase (PDI) family K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr4_0991 hypothetical protein K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1] D PAS_chr3_1167 hypothetical protein K07874 RAB1A; Ras-related protein Rab-1A D PAS_chr1-4_0120 Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport K20359 RABAC1; PRA1 family protein 1 D PAS_chr2-1_0484 Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport K20359 RABAC1; PRA1 family protein 1 D PAS_chr1-4_0364 Rab GTPase-activating protein K20372 TBC1D20; TBC1 domain family member 20 D PAS_chr1-3_0219 Cis-golgi GTPase-activating protein (GAP) K20360 TBC1D22; TBC1 domain family member 2 D PAS_chr1-3_0082 Integral membrane protein K20362 YIF1; protein transport protein YIF1 D PAS_chr1-3_0062 Integral membrane protein required for ER to Golgi transport K22939 IER3IP1; immediate early response 3-interacting protein 1 D PAS_chr4_0088 Essential protein involved in intracellular protein transport K20361 USO1; intracellular protein transport protein USO1 D PAS_chr4_0432 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles K10080 LMAN1; lectin, mannose-binding 1 D PAS_chr2-2_0178 hypothetical protein K10082 LMAN2; lectin, mannose-binding 2 D PAS_chr2-1_0753 Alpha-1,2-mannosidase involved in ER quality control K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209] D PAS_chr3_0875 Protein localized to COPII-coated vesicles, forms a complex with Erv46p K20366 ERGIC2; endoplasmic reticulum-Golgi intermediate compartment protein 2 D PAS_chr2-1_0796 Protein localized to COPII-coated vesicles, forms a complex with Erv41p K20367 ERGIC3; endoplasmic reticulum-Golgi intermediate compartment protein 3 D PAS_chr1-4_0225 ER-derived vesicles protein ERV14 K20368 CNIH; protein cornichon D PAS_chr2-1_0287 Protein localized to COPII-coated vesicles K20369 ERV29; ER-derived vesicles protein D PAS_chr2-1_0140 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding I K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10] D PAS_chr1-1_0294 Alpha subunit of COPI vesicle coatomer complex K05236 COPA; coatomer subunit alpha D PAS_chr4_0798 Essential beta-coat protein of the COPI coatomer K17301 COPB1; coatomer subunit beta D PAS_chr1-1_0181 Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport K17302 COPB2; coatomer subunit beta' D PAS_chr4_0225 Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat K17267 COPG; coatomer subunit gamma D PAS_chr1-1_0035 Delta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles K20471 COPD; coatomer subunit delta D PAS_chr3_0690 Epsilon-COP subunit of the coatomer K17268 COPE; coatomer subunit epsilon D PAS_chr1-4_0317 Zeta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles K20472 COPZ; coatomer subunit zeta D PAS_chr3_1248 hypothetical protein K20474 RINT1; RAD50-interacting protein 1 D PAS_chr1-3_0088 hypothetical protein K11578 ZW10; protein transport protein DSL1/ZW10 D PAS_chr2-1_0440 hypothetical protein K20475 SEC39; protein transport protein SEC39 D PAS_chr4_0403 hypothetical protein K22384 GET1; tail-anchored protein insertion receptor D PAS_chr3_0197 hypothetical protein K22386 GET2; GET complex subunit GET2 D PAS_chr4_0405 Guanine nucleotide exchange factor for Gpa1p K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PAS_chr3_0280 hypothetical protein K23387 GET4; golgi to ER traffic protein 4 D PAS_chr4_0534 hypothetical protein K20476 RIC1; RAB6A-GEF complex partner protein 1 D PAS_chr1-3_0067 Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p) that catalyzes nucleotide exchange on Ypt6 K20477 RGP1; RAB6A-GEF complex partner protein 2 D PAS_chr4_0775 HDEL receptor, an integral membrane protein that binds to the HDEL motif in proteins K10949 KDELR; ER lumen protein retaining receptor D PAS_chr3_0421 Member of an oxysterol-binding protein family with seven members in S. cerevisiae K20463 OSBPL3_6_7; oxysterol-binding protein-related protein 3/6/7 D PAS_chr1-4_0646 Oxysterol-binding protein K22285 OSBPL8; oxysterol-binding protein-related protein 8 D PAS_chr1-4_0278 Member of the oxysterol binding protein family, which includes seven yeast homologs K20465 OSBPL9_10_11; oxysterol-binding protein-related protein 9/10/11 D PAS_chr4_0870 hypothetical protein K22940 YIPF1_2; protein YIPF1/2 D PAS_chr2-1_0397 Integral membrane protein required for the biogenesis of ER-derived COPII transport vesicles K20363 YIPF5_7; protein YIPF5/7 D PAS_FragD_0007 hypothetical protein K22943 YIPF6; protein YIPF6 D PAS_chr2-1_0327 hypothetical protein K23562 EMC1; ER membrane protein complex subunit 1 D PAS_chr4_0765 Putative protein of unknown function K23563 EMC2; ER membrane protein complex subunit 2 D PAS_chr2-1_0551 Putative protein of unknown function K23564 EMC3; ER membrane protein complex subunit 3 D PAS_chr2-1_0296 Putative protein of unknown function K23565 EMC4; ER membrane protein complex subunit 4 D PAS_chr3_0541 hypothetical protein K23566 MMGT1; membrane magnesium transporter 1 D PAS_chr4_0517 Putative protein of unknown function K23567 EMC6; ER membrane protein complex subunit 6 D PAS_chr1-4_0629 Subunit of the Ssh1 translocon complex K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr1-3_0202 Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p) K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr2-2_0210 Beta subunit of the Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p) K09481 SEC61B; protein transport protein SEC61 subunit beta D PAS_chr1-1_0023 hypothetical protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D PAS_chr3_0464 Putative protein of unknown function K24962 CCDC47; PAT complex subunit CCDC47 D PAS_chr2-1_0699 GPI inositol deacylase of the ER that negatively regulates COPII vesicle formation K05294 PGAP1; GPI inositol-deacylase [EC:3.-.-.-] D PAS_chr2-2_0114 Protein of the endoplasmic reticulum, required for GPI-phospholipase A2 activity K23553 PGAP3; post-GPI attachment to proteins factor 3 D PAS_chr3_0423 Putative membrane protein of unknown function involved in Mn2+ homeostasis K23362 MPPE1; ethanolamine phosphate phosphodiesterase [EC:3.1.-.-] D PAS_chr1-4_0333 hypothetical protein K23362 MPPE1; ethanolamine phosphate phosphodiesterase [EC:3.1.-.-] D PAS_chr3_0229 hypothetical protein K20724 TMEM33; transmembrane protein 33 D PAS_chr4_0551 hypothetical protein K20724 TMEM33; transmembrane protein 33 D PAS_chr4_0483 Protein required for normal intracellular sterol distribution and for sphingolipid metabolism K21848 ARV1; lipid intermediate transporter D PAS_chr1-3_0133 hypothetical protein K21849 KEG1; beta-1,6-glucan synthesis-associated protein KEG1 D PAS_chr4_0508 Protein required for beta-1,6 glucan biosynthesis K21850 KRE6; beta-glucan synthesis-associated protein KRE6 D PAS_chr2-1_0884 hypothetical protein K23292 LNPK; endoplasmic reticulum junction formation protein lunapark D PAS_chr1-3_0097 hypothetical protein K26681 INSIG; insulin-induced protein D PAS_chr1-1_0271 Evolutionarily conserved non-essential protein present in early Golgi cisternae K26683 GOLT1; vesicle transport protein GOT1 D PAS_chr3_0279 Protein of unknown function, contains two predicted GTP-binding motifs K22698 SEY1; protein SEY1 [EC:3.6.5.-] D PAS_chr2-2_0432 Regulatory subunit of the Atg1p signaling complex K08331 ATG13; autophagy-related protein 13 D PAS_chr3_0501 hypothetical protein K19730 ATG101; autophagy-related protein 101 D PAS_chr2-1_0641 Protein serine/threonine kinase required for vesicle formation in autophagy K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1] D PAS_chr2-1_0672 Scaffold protein responsible for pre-autophagosomal structure organization K08329 ATG17; autophagy-related protein 17 D PAS_chr2-1_0211 Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II K08334 BECN; beclin D PAS_chr4_0510 Transmembrane protein involved in formation of Cvt and autophagic vesicles K17907 ATG9; autophagy-related protein 9 D PAS_chr3_0931 Phosphoinositide binding protein required for vesicle formation in autophagy K17908 WIPI1_2; autophagy-related protein 18 D PAS_chr3_1016 Phosphoinositide binding protein K17908 WIPI1_2; autophagy-related protein 18 D PAS_chr1-3_0168 Peripheral membrane protein required for vesicle formation K17906 ATG2; autophagy-related protein 2 D PAS_chr3_0363 Conserved ubiquitin-like modifier K08336 ATG12; ubiquitin-like protein ATG12 D PAS_chr1-4_0310 Autophagy-related protein K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7 D PAS_chr4_0459 Conserved protein involved in autophagy and the Cvt pathway K08339 ATG5; autophagy-related protein 5 D PAS_chr4_0704 Conserved protein that is a component of autophagosomes and Cvt vesicles K08341 GABARAP; GABA(A) receptor-associated protein D PAS_chr1-4_0522 Conserved cysteine protease required for autophagy K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-] D PAS_chr3_0688 E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3 D PAS_chr3_0803 Vacuolar aminopeptidase K01268 LAP4; aminopeptidase I [EC:3.4.11.22] D PAS_chr4_0790 Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D PAS_chr4_0913 hypothetical protein K01267 DNPEP; aspartyl aminopeptidase [EC:3.4.11.21] D PAS_chr1-4_0555 Adapter protein for pexophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08330 ATG11; autophagy-related protein 11 D PAS_chr1-1_0465 hypothetical protein K17900 ATG15; lipase ATG15 [EC:3.1.1.3] D PAS_chr2-2_0110 Type I membrane protein involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K21141 ATG27; autophagy-related protein 27 D PAS_chr1-4_0101 Phosphorylated vacuolar membrane protein that interacts with Atg13p K08332 VAC8; vacuolar protein 8 D PAS_chr2-1_0285 Mitochondrial integral membrane protein involved in mitochondrial fusion and maintenanceof the mitoc K06030 MFN2; mitofusin 2 [EC:3.6.5.-] D PAS_chr4_0624 Non-essential protein of unknown function required for transcriptional induction K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0447 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr3_1192 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-4_0561 Hexokinase-2 K00844 HK; hexokinase [EC:2.7.1.1] D PAS_chr1-1_0315 Protein that inhibits ATP hydrolysis by the F1F0-ATP synthase K22255 ATPIF1; ATPase inhibitor, mitochondrial D PAS_chr3_1190 hypothetical protein K17771 TOM7; mitochondrial import receptor subunit TOM7 D PAS_chr1-1_0431 hypothetical protein K19717 ATG33; autophagy-related protein 33 D PAS_chr3_1073 Peroxisomal membrane protein (PMP) K13336 PEX3; peroxin-3 D PAS_chr4_0794 Peroxisomal membrane peroxin that is a central component of the peroxisomal protein import machinery K13343 PEX14; peroxin-14 D PAS_chr3_1230 ATG30 K22259 ATG30; autophagy-related protein 30 D PAS_chr3_1045 Peroxisome biosynthesis protein PAS1 K13338 PEX1; peroxin-1 D PAS_chr1-4_0133 AAA-peroxin that heterodimerizes with AAA-peroxin Pex1p K13339 PEX6; peroxin-6 D PAS_chr2-1_0302 Putative catalytic subunit of a class II histone deacetylase complex K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr2-1_0437 Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAS_chr3_0693 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr3_0826 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr2-1_0769 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAS_chr2-1_0892 hypothetical protein K04523 UBQLN; ubiquilin D PAS_chr1-4_0130 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D PAS_FragB_0052 Translational elongation factor EF-1 alpha K03231 EEF1A; elongation factor 1-alpha D PAS_chr1-4_0013 carboxypeptidase Y K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5] D PAS_chr2-1_0557 PIK-related protein kinase and rapamycin target K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] D PAS_chr2-2_0150 Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface K08266 MLST8; target of rapamycin complex subunit LST8 D PAS_chr2-1_0459 Subunit of TORC1, a rapamycin-sensitive complex involved in growth control K07204 RAPTOR; regulatory associated protein of mTOR D PAS_chr3_0162 Component of a membrane-bound complex containing the Tor2p kinase and other proteins K20410 MAPKAP1; target of rapamycin complex 2 subunit MAPKAP1/AVO1 D PAS_chr4_0955 hypothetical protein K08267 RICTOR; rapamycin-insensitive companion of mTOR D PAS_chr2-1_0241 Component of a complex containing the Tor2p kinase and other proteins, which may have a role in regu K25576 AVO2; target of rapamycin complex 2 subunit AVO2 D PAS_chr1-3_0181 hypothetical protein K20404 DEPDC5; SEA/GATOR complex protein SEA1/DEPDC5 D PAS_chr4_0159 Protein with a possible role in regulating expression of nitrogen permeases K20405 NPRL2; nitrogen permease regulator 2 D PAS_chr1-4_0385 Ser/Thr protein kinase involved in salt tolerance K20406 NPRL3; nitrogen permease regulator 3 D PAS_chr1-4_0442 hypothetical protein K20408 WDR24; SEA/GATOR complex protein SEA2/WDR24 D PAS_chr1-3_0222 hypothetical protein K20409 WDR59; SEA/GATOR complex protein SEA3/WDR59 D PAS_chr1-1_0224 Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex K14299 SEH1; nucleoporin SEH1 D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr1-4_0119 Essential protein involved in the TOR signaling pathway K17606 IGBP1; immunoglobulin-binding protein 1 D PAS_chr2-1_0083 hypothetical protein K21249 UVRAG; UV radiation resistance-associated gene protein D PAS_chr1-1_0353 Vacuolar integral membrane protein K06902 UMF1; MFS transporter, UMF1 family D PAS_chr3_0295 Vacuolar transporter K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter) D PAS_chr2-2_0343 Vacuolar transporter, exports large neutral amino acids from the vacuole K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter) D PAS_chr1-4_0196 Phosphatidylinositol 3,5-bisphosphate-binding protein K22991 WDR45; WD repeat-containing protein 45 D PAS_chr1-1_0410 Vacuolar ATPase assembly integral membrane protein VMA21 K23952 VMA21; vacuolar ATPase assembly integral membrane protein VMA21 D PAS_chr1-4_0625 hypothetical protein K27411 PHAF1; phagosome assembly factor 1 D PAS_FragB_0012 Myosin-2 K10357 MYO5; myosin V D PAS_chr2-2_0328 Subunit of the ARP2/3 complex K05757 ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B D PAS_chr3_1121 Subunit of the ARP2/3 complex K05758 ARPC2; actin related protein 2/3 complex, subunit 2 D PAS_chr3_0238 Subunit of the ARP2/3 complex K05756 ARPC3; actin related protein 2/3 complex, subunit 3 D PAS_chr1-4_0185 Subunit of the ARP2/3 complex K05755 ARPC4; actin related protein 2/3 complex, subunit 4 D PAS_chr2-2_0029 Subunit of the ARP2/3 complex K05754 ARPC5; actin related protein 2/3 complex, subunit 5 D PAS_chr3_0458 Essential component of the Arp2/3 complex K17260 ACTR2; actin-related protein 2 D PAS_chr2-1_0556 Essential component of the Arp2/3 complex K18584 ACTR3; actin-related protein 3 D PAS_chr1-4_0623 Actin assembly factor, activates the Arp2/3 protein complex that nucleates branched actin filaments K23612 WASL; neural Wiskott-Aldrich syndrome protein D PAS_chr2-2_0320 Actin-binding protein of the cortical actin cytoskeleton K20520 DBNL; drebrin-like protein D PAS_chr3_1226 hypothetical protein K20521 BBC1; myosin tail region-interacting protein MTI1 D PAS_chr4_0500 Protein that induces appearance of [PIN+] prion when overproduced K20522 LSB1_2; LAS seventeen-binding protein 1/2 D PAS_chr3_0795 Protein involved in the organization of the actin cytoskeleton K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1 D PAS_chr4_0841 hypothetical protein K20524 LSB5; LAS seventeen-binding protein 5 D PAS_chr1-4_0143 Type II phosphatidylinositol 4-kinase that binds Las17p K13711 PI4K2; phosphatidylinositol 4-kinase type 2 [EC:2.7.1.67] D PAS_chr3_0106 Profilin, actin-and phosphatidylinositol 4,5-bisphosphate-binding protein, involved in cytoskeleton K05759 PFN; profilin D PAS_chr1-4_0027 Cofilin, promotes actin filament depolarization in a pH-dependent manner K05765 CFL; cofilin D PAS_chr2-2_0067 CAP (cyclase-associated protein) subunit of adenylyl cyclase complex K17261 CAP1_2; adenylyl cyclase-associated protein D PAS_chr3_0589 Component of yeast cortical actin cytoskeleton K20526 TAGLN; transgelin D PAS_chr2-1_0599 Protein of unknown function with similarity to human DOCK proteins K05727 DOCK3; dedicator of cytokinesis protein 3 C 04121 Ubiquitin system [BR:ppa04121] D PAS_chr4_0762 Ubiquitin K08770 UBC; ubiquitin C D PAS_chr2-1_0486 ubiquitin-60S ribosomal protein L40 fusion protein K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PAS_chr3_0722 ubiquitin-40S ribosomal protein S31 fusion protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PAS_chr4_0704 Conserved protein that is a component of autophagosomes and Cvt vesicles K08341 GABARAP; GABA(A) receptor-associated protein D PAS_chr3_0363 Conserved ubiquitin-like modifier K08336 ATG12; ubiquitin-like protein ATG12 D PAS_chr2-1_0393 Ubiquitin-like protein with weak sequence similarity to ubiquitin K12161 URM1; ubiquitin related modifier 1 D PAS_chr3_0856 Ubiquitin activating enzyme (E1), involved in ubiquitin-mediated protein degradation K03178 UBE1; ubiquitin-activating enzyme E1 [EC:6.2.1.45] D PAS_chr2-2_0425 Nuclear protein that acts as a heterodimer with Uba2p to activate Smt3p (SUMO) K10684 UBLE1A; ubiquitin-like 1-activating enzyme E1 A [EC:6.2.1.45] D PAS_chr2-1_0119 Nuclear protein that acts as a heterodimer with Aos1p to activate Smt3p (SUMO) before its conjugatio K10685 UBLE1B; ubiquitin-like 1-activating enzyme E1 B [EC:6.2.1.45] D PAS_chr2-1_0152 Protein that acts together with Ula1p to activate Rub1p before its conjugation to proteins (neddylat K10686 UBA3; NEDD8-activating enzyme E1 [EC:6.2.1.64] D PAS_chr3_0074 Protein that acts together with Uba3p to activate Rub1p before its conjugation to proteins (neddylat K04532 NAE1; NEDD8-activating enzyme E1 regulatory subunit D PAS_chr2-1_0563 Protein that activates Urm1p before its conjugation to proteins (urmylation) K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11] D PAS_chr1-4_0310 Autophagy-related protein K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7 D PAS_chr3_0359 Ubiquitin-conjugating enzyme (E2) K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D PAS_chr3_0709 Ubiquitin-conjugating enzyme most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C K06688 UBE2C; ubiquitin-conjugating enzyme E2 C [EC:2.3.2.23] D PAS_chr3_0710 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23] D PAS_chr3_0924 Ubiquitin conjugating enzyme, involved in the ER-associated protein degradation pathway K04555 UBE2G2; ubiquitin-conjugating enzyme E2 G2 [EC:2.3.2.23] D PAS_chr3_0779 Ubiquitin-conjugating enzyme that negatively regulates gluconeogenesis K10576 UBE2H; ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23] D PAS_chr1-1_0437 Ubiquitin-conjugating enzyme involved in ER-associated protein degradation K04554 UBE2J2; ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23] D PAS_chr4_0429 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein K04649 UBE2K; ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:2.3.2.23] D PAS_chr2-1_0058 Ubiquitin-conjugating enzyme involved in the error-free DNA postreplication repair pathway K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] D PAS_chr1-3_0048 Ubiquitin-conjugating enzyme (E2) and catalytic subunit of SCF ubiquitin-protein ligase complex K02207 UBE2R; ubiquitin-conjugating enzyme E2 R [EC:2.3.2.23] D PAS_FragB_0055 ubiquitin-conjugating enzyme K10688 UBE2W; ubiquitin-conjugating enzyme E2 W [EC:2.3.2.23 2.3.2.25] D PAS_chr4_0496 Peroxisomal ubiquitin conjugating enzyme K10689 PEX4; peroxin-4 [EC:2.3.2.23] D PAS_chr2-1_0714 SUMO-conjugating enzyme involved in the Smt3p conjugation pathway K10577 UBE2I; ubiquitin-conjugating enzyme E2 I D PAS_chr1-4_0670 hypothetical protein K10579 UBE2M; ubiquitin-conjugating enzyme E2 M [EC:2.3.2.34] D PAS_chr3_0688 E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3 D PAS_chr2-1_0164 Ubiquitin-conjugating enzyme (E4), elongates polyubiquitin chains on substrate proteins K10589 UBE3C; ubiquitin-protein ligase E3 C [EC:2.3.2.26] D PAS_chr2-1_0798 Putative protein of unknown function K20803 UBE3D; ubiquitin-protein ligase E3 D [EC:2.3.2.26] D PAS_chr1-1_0363 Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p K10590 TRIP12; E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] D PAS_chr2-1_0354 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26] D PAS_chr3_0044 E3 ubiquitin ligase of the hect-domain class K10592 HUWE1; E3 ubiquitin-protein ligase HUWE1 [EC:2.3.2.26] D PAS_chr2-1_0469 Protein with similarity to hect domain E3 ubiquitin-protein ligases K12232 HECTD2; E3 ubiquitin-protein ligase HECTD2 [EC:2.3.2.26] D PAS_chr1-1_0303 Ubiquitin chain assembly factor (E4) that cooperates with a ubiquitin-activating enzyme (E1) K10597 UBE4B; ubiquitin conjugation factor E4 B [EC:2.3.2.27] D PAS_chr4_0764 Splicing factor associated with the spliceosome K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D PAS_chr4_0172 E3 ubiquitin ligase for Rad6p K10696 BRE1; E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27] D PAS_chr3_0538 Ubiquitin-protein ligase of the ER/nuclear envelope K10661 MARCH6; E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27] D PAS_chr2-2_0467 hypothetical protein K12236 NFX1; transcriptional repressor NF-X1 D PAS_chr4_0759 C3HC4-type RING-finger peroxisomal membrane peroxin K13345 PEX12; peroxin-12 D PAS_chr3_0043 peroxisomal integral membrane protein K06664 PEX2; peroxin-2 D PAS_chr1-4_0173 hypothetical protein K11968 ARIH1; ariadne-1 [EC:2.3.2.31] D PAS_chr1-3_0150 Ubiquitin-protein ligase (E3) K10625 UBR1; E3 ubiquitin-protein ligase UBR1 [EC:2.3.2.27] D PAS_chr4_0521 Ubiquitin-protein ligase (E3) that interacts with Rad6p/Ubc2p K10625 UBR1; E3 ubiquitin-protein ligase UBR1 [EC:2.3.2.27] D PAS_chr4_0440 hypothetical protein K11979 UBR7; E3 ubiquitin-protein ligase UBR7 [EC:2.3.2.27] D PAS_chr3_0063 Putative protein of unknown function, contains a zinc finger region and has homology to human BRAP2 K10632 BRAP; BRCA1-associated protein [EC:2.3.2.27] D PAS_chr1-4_0594 General negative regulator of transcription subunit 4 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] D PAS_c121_0007 hypothetical protein K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D PAS_chr2-1_0274 Protein involved in postreplication repair K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27] D PAS_chr2-1_0590 Cytoplasmic protein of unknown function predicted to encode a DNA-3-methyladenine glycosidase II K26979 RNF10; E3 ubiquitin-protein ligase RNF10 [EC:2.3.2.27] D PAS_chr4_0126 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1 D PAS_chr4_0035 Putative helicase K15710 SHPRH; E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.- 2.3.2.27] D PAS_chr4_0156 Ubiquitin-protein ligase K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27] D PAS_chr4_0444 Ubiquitin-protein ligase K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27] D PAS_chr1-4_0573 zinc finger protein K22381 ZNF598; E3 ubiquitin-protein ligase ZNF598 [EC:2.3.2.27] D PAS_chr3_1152 hypothetical protein K16275 BAH; E3 ubiquitin-protein ligase BAH [EC:2.3.2.27] D PAS_chr3_0061 Golgi-localized RING-finger ubiquitin ligase (E3), involved in ubiquitinating and sorting membrane P K23788 TUL1; transmembrane E3 ubiquitin-protein ligase [EC:2.3.2.27] D PAS_chr3_0521 Protein involved in ubiquitin ligation K23787 DMA1_2; E3 ubiquitin-protein ligase DMA1/2 [EC:2.3.2.27] D PAS_chr2-1_0398 DNA repair protein Nse1 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] D PAS_chr4_0436 RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF) K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] D PAS_chr3_0129 SUMO/Smt3 ligase that promotes the attachment of sumo (Smt3p K04706 PIAS1; E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-] D PAS_chr3_0384 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] D PAS_chr2-1_0605 Putative Nedd8 ligase K17822 DCUN1D1_2; DCN1-like protein 1/2 D PAS_chr1-1_0312 Cullin, structural protein of SCF complexes, involved in ubiquination K03347 CUL1; cullin 1 D PAS_chr3_1258 hypothetical protein K03094 SKP1; S-phase kinase-associated protein 1 D PAS_chr3_0594 F-box protein containing five copies of the WD40 motif, controls cell cycle function K10259 MET30; F-box and WD-40 domain protein MET30 D PAS_chr2-1_0666 F-box protein required for G1/S and G2/M transition K03361 CDC4; F-box and WD-40 domain protein CDC4 D PAS_chr2-2_0226 hypothetical protein K10273 FBXL7; F-box and leucine-rich repeat protein 7 D PAS_chr1-1_0295 JmjC domain family histone demethylase specific for H3-K36 K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27] D PAS_chr4_0769 F-box protein component of the SCF ubiquitin-ligase complex K03360 GRR1; F-box and leucine-rich repeat protein GRR1 D PAS_chr1-1_0038 Origin-binding F-box protein that forms an SCF ubiquitin ligase complex with Skp1p and Cdc53p K15068 DIA2; protein DIA2 D PAS_chr3_0352 Putative SCF-ubiquitin ligase F-box protein K10295 FBXO9; F-box protein 9 D PAS_chr4_0861 F-box protein involved in recycling plasma membrane proteins internalized by endocytosis K15071 RCY1; recyclin-1 D PAS_chr1-4_0067 F-Box protein K15072 SAF1; SCF-associated factor 1 D PAS_chr2-1_0200 F-box receptor protein, subunit of the Skp1-Cdc53-F-box receptor (SCF) E3 ubiquitin ligase complex K15073 UFO1; ubiquitin ligase complex F-box protein UFO1 D PAS_chr2-1_0369 Ubiquitin-protein ligase, member of the cullin family with similarity to Cdc53p and human CUL3 K03869 CUL3; cullin 3 D PAS_chr2-1_0425 hypothetical protein K10520 ABTB1; ankyrin repeat and BTB/POZ domain-containing protein 1 D PAS_chr1-4_0609 Cullin, structural protein of SCF complexes K10609 CUL4; cullin 4 D PAS_chr2-2_0308 Protein involved in DNA repair, related to the human CSA protein K10570 ERCC8; DNA excision repair protein ERCC-8 D PAS_FragB_0054 WD repeat-containing protein K11805 DCAF7; DDB1- and CUL4-associated factor 7 D PAS_chr3_0240 Essential protein required for biogenesis of 40S (small) ribosomal subunit K11806 DCAF13; DDB1- and CUL4-associated factor 13 D PAS_chr4_0849 Protein of unknown function, involved in proteasome-dependent catabolite inactivation of fructose-1 K22382 WDR26; WD repeat-containing protein 26 D PAS_chr1-4_0653 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 D PAS_chr2-1_0371 hypothetical protein K26122 MMS22; E3 ubiquitin-protein ligase substrate receptor MMS22 D PAS_chr3_0293 Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03358 APC11; anaphase-promoting complex subunit 11 D PAS_chr2-1_0604 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03349 APC2; anaphase-promoting complex subunit 2 D PAS_chr2-2_0495 hypothetical protein K03364 CDH1; cell division cycle 20-like protein 1, cofactor of APC complex D PAS_chr1-4_0473 Meiosis-specific APC/C activator protein AMA1 K12782 AMA1; meiosis-specific APC/C activator protein AMA1 D PAS_chr1-4_0020 Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03348 APC1; anaphase-promoting complex subunit 1 D PAS_chr1-3_0148 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03350 APC3; anaphase-promoting complex subunit 3 D PAS_chr3_0477 hypothetical protein K03351 APC4; anaphase-promoting complex subunit 4 D PAS_chr1-4_0197 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03353 APC6; anaphase-promoting complex subunit 6 D PAS_chr3_1078 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03355 APC8; anaphase-promoting complex subunit 8 D PAS_chr3_1218 hypothetical protein K03357 APC10; anaphase-promoting complex subunit 10 D PAS_chr3_0904 Strand exchange protein, forms a helical filament with DNA that searches for homology K04482 RAD51; DNA repair protein RAD51 D PAS_chr3_0209 Cytosolic protein required for sporulation K23333 RMND5; E3 ubiquitin-protein transferase RMND5 [EC:2.3.2.27] D PAS_chr2-1_0299 Protein involved in proteasome-dependent catabolite degradation of fructose-1,6-bisphosphatase K23334 RANBP9_10; Ran-binding protein 9/10 D PAS_chr4_0581 Protein of unknown function, required for survival upon exposure to K1 killer toxin K18624 MAEA; macrophage erythroblast attacher D PAS_chr4_0047 Peripheral membrane protein located at Vid (vacuole import and degradation) vesicles K23335 GID4; glucose-induced degradation protein 4 D PAS_chr4_0973 hypothetical protein K23338 GID8; glucose-induced degradation protein 8 D PAS_chr4_0997 hypothetical protein K22645 SLX5; E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX5 [EC:2.3.2.27] D PAS_chr1-3_0144 hypothetical protein K22646 SLX8; E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8 [EC:2.3.2.27] D PAS_chr1-1_0128 hypothetical protein K17263 CAND1; cullin-associated NEDD8-dissociated protein 1 D PAS_chr3_0310 UBX (ubiquitin regulatory X) domain-containing protein K24350 UBXN7; UBX domain-containing protein 7 D PAS_chr3_0853 Ubiquitin C-terminal hydrolase K05609 UCHL3; ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12] D PAS_chr3_0605 Ubiquitin carboxyl-terminal hydrolase K11835 USP4_11; ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12] D PAS_chr3_0933 Ubiquitin-specific protease that specifically disassembles unanchored ubiquitin chains K11836 USP5_13; ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12] D PAS_chr4_0022 Ubiquitin-specific protease that may play a role in ubiquitin precursor processing K11838 USP7; ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] D PAS_chr1-3_0261 Ubiquitin isopeptidase K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12] D PAS_chr1-4_0585 Ubiquitin-specific protease that interacts with Bre5p K11841 USP10; ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12] D PAS_chr1-4_0341 Ubiquitin-specific protease K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] D PAS_chr3_0117 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins, cleaves at the C ter K11849 USP25; ubiquitin carboxyl-terminal hydrolase 25 [EC:3.4.19.12] D PAS_chr2-2_0203 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins K11870 UBP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12] D PAS_chr1-1_0040 Ubiquitin carboxyl-terminal hydrolase K11871 UBP7_11; ubiquitin carboxyl-terminal hydrolase 7/11 [EC:3.4.19.12] D PAS_chr1-1_0435 Putative ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific proteas K11872 UBP9_13; ubiquitin carboxyl-terminal hydrolase 9/13 [EC:3.4.19.12] D PAS_chr1-3_0108 Ubiquitin-specific protease that deubiquitinates ubiquitin-protein moieties K11873 UBP10; ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12] D PAS_chr4_0174 Deubiquitinating enzyme anchored to the outer mitochondrial membrane K11874 UBP16; ubiquitin carboxyl-terminal hydrolase 16 [EC:3.4.19.12] D PAS_chr1-4_0052 hypothetical protein K18342 OTUD6; OTU domain-containing protein 6 [EC:3.4.19.12] D PAS_chr2-1_0027 Putative protein of unknown function K01309 MINDY1_2; ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:3.4.19.12] D PAS_chr2-2_0341 Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid K03030 PSMD14; 26S proteasome regulatory subunit N11 D PAS_chr2-2_0056 hypothetical protein K11866 STAMBP; STAM-binding protein [EC:3.4.19.12] D PAS_chr2-2_0097 Ubl (ubiquitin-like protein)-specific protease that cleaves Smt3p protein conjugates K08592 SENP1; sentrin-specific protease 1 [EC:3.4.22.68] D PAS_chr1-1_0010 Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins K08596 SENP7; sentrin-specific protease 7 [EC:3.4.22.68] D PAS_chr4_0503 hypothetical protein K08597 SENP8; sentrin-specific protease 8 [EC:3.4.22.68] D PAS_chr1-4_0454 COP9 signalosome complex subunit 2 K12176 COPS2; COP9 signalosome complex subunit 2 D PAS_chr1-3_0105 Catalytic subunit of the COP9 signalosome (CSN) complex K09613 COPS5; COP9 signalosome complex subunit 5 [EC:3.4.-.-] D PAS_chr2-2_0486 hypothetical protein K24365 CSN9; COP9 signalosome complex subunit 9 D PAS_chr4_0772 Subunit of the Cop9 signalosome K24364 CSN12; COP9 signalosome complex subunit 12 C 03051 Proteasome [BR:ppa03051] D PAS_chr4_0066 Alpha 1 subunit of the 20S core complex of the 26S proteasome K02730 PSMA6; 20S proteasome subunit alpha 1 [EC:3.4.25.1] D PAS_chr2-1_0188 Alpha 2 subunit of the 20S proteasome K02726 PSMA2; 20S proteasome subunit alpha 2 [EC:3.4.25.1] D PAS_chr4_0506 Alpha 3 subunit of the 20S proteasome, the only nonessential 20S subunit K02728 PSMA4; 20S proteasome subunit alpha 3 [EC:3.4.25.1] D PAS_chr3_0450 Alpha 4 subunit of the 20S proteasome K02731 PSMA7; 20S proteasome subunit alpha 4 [EC:3.4.25.1] D PAS_chr3_1129 Alpha 5 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism K02729 PSMA5; 20S proteasome subunit alpha 5 [EC:3.4.25.1] D PAS_chr2-1_0291 Alpha 6 subunit of the 20S proteasome K02725 PSMA1; 20S proteasome subunit alpha 6 [EC:3.4.25.1] D PAS_chr3_0699 Alpha 7 subunit of the 20S proteasome K02727 PSMA3; 20S proteasome subunit alpha 7 [EC:3.4.25.1] D PAS_chr3_0748 Beta 1 subunit of the 20S proteasome, responsible for cleavage after acidic residues in peptides K02738 PSMB6; 20S proteasome subunit beta 1 [EC:3.4.25.1] D PAS_chr2-1_0122 Endopeptidase with trypsin-like activity that cleaves after basic residues K02739 PSMB7; 20S proteasome subunit beta 2 [EC:3.4.25.1] D PAS_chr2-2_0073 Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism K02735 PSMB3; 20S proteasome subunit beta 3 [EC:3.4.25.1] D PAS_chr1-4_0117 Beta 4 subunit of the 20S proteasome K02734 PSMB2; 20S proteasome subunit beta 4 [EC:3.4.25.1] D PAS_chr4_0668 Beta 5 subunit of the 20S proteasome, responsible for the chymotryptic activity of the proteasome K02737 PSMB5; 20S proteasome subunit beta 5 [EC:3.4.25.1] D PAS_chr4_0776 Beta 6 subunit of the 20S proteasome K02732 PSMB1; 20S proteasome subunit beta 6 [EC:3.4.25.1] D PAS_chr1-4_0567 Beta 7 subunit of the 20S proteasome K02736 PSMB4; 20S proteasome subunit beta 7 [EC:3.4.25.1] D PAS_chr4_0736 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03061 PSMC2; 26S proteasome regulatory subunit T1 D PAS_chr4_0731 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03062 PSMC1; 26S proteasome regulatory subunit T2 D PAS_chr3_0881 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03063 PSMC4; 26S proteasome regulatory subunit T3 D PAS_chr4_0387 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03064 PSMC6; 26S proteasome regulatory subunit T4 D PAS_chr4_0300 One of six ATPases of the 19S regulatory particle of the 26S proteasome K03065 PSMC3; 26S proteasome regulatory subunit T5 D PAS_chr1-1_0054 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation K03066 PSMC5; 26S proteasome regulatory subunit T6 D PAS_chr3_0898 Non-ATPase base subunit of the 19S regulatory particle of the 26S proteasome K03028 PSMD2; 26S proteasome regulatory subunit N1 D PAS_chr2-1_0656 Subunit of the 26S proteasome, substrate of the N-acetyltransferase Nat1p K03032 PSMD1; 26S proteasome regulatory subunit N2 D PAS_chr3_0223 non-ATPase regulatory subunit of the 26S proteasome lid K03033 PSMD3; 26S proteasome regulatory subunit N3 D PAS_chr2-1_0392 Protein with similarity to the p27 subunit of mammalian proteasome modulator K06693 PSMD9; 26S proteasome regulatory subunit N4 D PAS_chr1-1_0299 Essential, non-ATPase regulatory subunit of the 26S proteasome lid K03035 PSMD12; 26S proteasome regulatory subunit N5 D PAS_chr3_1069 Essential, non-ATPase regulatory subunit of the 26S proteasome lid K03036 PSMD11; 26S proteasome regulatory subunit N6 D PAS_chr3_0457 Essential, non-ATPase regulatory subunit of the 26S proteasome K03037 PSMD6; 26S proteasome regulatory subunit N7 D PAS_chr1-3_0195 Essential, non-ATPase regulatory subunit of the 26S proteasome K03038 PSMD7; 26S proteasome regulatory subunit N8 D PAS_chr3_0513 hypothetical protein K03038 PSMD7; 26S proteasome regulatory subunit N8 D PAS_chr1-1_0079 Non-ATPase regulatory subunit of the 26S proteasome K03039 PSMD13; 26S proteasome regulatory subunit N9 D PAS_chr3_1083 Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome K03029 PSMD4; 26S proteasome regulatory subunit N10 D PAS_chr2-2_0341 Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid K03030 PSMD14; 26S proteasome regulatory subunit N11 D PAS_chr2-1_0597 hypothetical protein K06691 RPN13; 26S proteasome regulatory subunit N13 D PAS_chr4_0299 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 D PAS_chr1-4_0478 Regulatory, non-ATPase subunit of the 26S proteasome K06694 PSMD10; 26S proteasome non-ATPase regulatory subunit 10 D PAS_chr3_0776 Proteosome activator subunit K06699 PSME4; proteasome activator subunit 4 D PAS_chr2-1_0431 Short-lived chaperone required for correct maturation of the 20S proteasome K11599 POMP; proteasome maturation protein D PAS_chr1-4_0404 hypothetical protein K11879 PBA1; proteasome chaperone 1 D PAS_chr2-1_0552 Protein involved in 20S proteasome assembly K11880 ADD66; proteasome chaperone 2 D PAS_chr1-4_0147 eukaryotic translation initiation factor 3 subunit K03250 EIF3E; translation initiation factor 3 subunit E D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr1-4_0130 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D PAS_chr3_1032 Essential nuclear protein involved in proteasome maturation and synthesis of 40S ribosomal subunits K11883 NOB1; RNA-binding protein NOB1 D PAS_chr2-2_0445 Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (with Rad4p) K10839 RAD23; UV excision repair protein RAD23 D PAS_chr2-1_0892 hypothetical protein K04523 UBQLN; ubiquilin D PAS_chr1-3_0258 DNA damage-inducible V-SNARE binding protein, contains a ubiquitin-associated (UBA) domain K11885 DDI1; DNA damage-inducible protein 1 D PAS_chr4_0761 Major component of the proteasome K11886 ECM29; proteasome component ECM29 D PAS_chr1-1_0114 Putative non-ATPase subunit of the 19S regulatory particle of the 26S proteasome K11887 PAAF1; proteasomal ATPase-associated factor 1 D PAS_chr3_0689 Transcription factor that stimulates expression of proteasome genes K03034 RPN4; protein RPN4 D PAS_chr3_0678 Protein that interacts with the karyopherin Srp1p K11888 CUT8; protein Cut8 C 03032 DNA replication proteins [BR:ppa03032] D PAS_chr4_0526 Largest subunit of the origin recognition complex K02603 ORC1; origin recognition complex subunit 1 D PAS_chr3_0941 Subunit of the origin recognition complex, which directs DNA replication K02604 ORC2; origin recognition complex subunit 2 D PAS_chr2-1_0570 Subunit of the origin recognition complex K02606 ORC4; origin recognition complex subunit 4 D PAS_chr1-3_0084 Subunit of the origin recognition complex K02607 ORC5; origin recognition complex subunit 5 D PAS_chr3_1239 hypothetical protein K02608 ORC6; origin recognition complex subunit 6 D PAS_chr3_0599 Essential ATP-binding protein required for DNA replication, component of the pre-replicative complex K02213 CDC6; cell division control protein 6 D PAS_chr4_0223 Protein involved in DNA replication K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3] D PAS_chr2-1_0149 Protein involved in DNA replication K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3] D PAS_chr1-4_0142 Essential helicase component of heterohexameric MCM2-7 complexes K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3] D PAS_chr2-2_0339 Component of the hexameric MCM complex K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3] D PAS_chr1-4_0360 Protein involved in DNA replication K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3] D PAS_chr4_0891 DNA replication licensing factor K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3] D PAS_chr1-4_0192 DDK (Dbf4-dependent kinase) catalytic subunit K02214 CDC7; cell division control protein 7 [EC:2.7.11.1] D PAS_chr1-3_0050 Regulatory subunit of Cdc7p-Dbf4p kinase complex K02309 DBF4; regulatory subunit for Cdc7p protein kinase D PAS_chr4_0028 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) K10732 GINS1; GINS complex subunit 1 D PAS_chr1-4_0216 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) K10733 GINS2; GINS complex subunit 2 D PAS_chr2-1_0505 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) K10734 GINS3; GINS complex subunit 3 D PAS_chr1-4_0444 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) K10735 GINS4; GINS complex subunit 4 D PAS_chr4_0903 DNA Polymerase II Epsilon complex with BRCT domain K03507 DPB11; DNA replication regulator DPB11 D PAS_chr4_0752 hypothetical protein K10729 SLD2; DNA replication regulator SLD2 D PAS_chr1-1_0472 hypothetical protein K10731 SLD3; DNA replication regulator SLD3 D PAS_chr1-1_0376 DNA replication initiation factor K06628 CDC45; cell division control protein 45 D PAS_chr4_0946 hypothetical protein K10736 MCM10; minichromosome maintenance protein 10 D PAS_chr2-2_0349 Catalytic subunit of the DNA polymerase I alpha-primase complex K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7] D PAS_chr2-1_0500 B subunit of DNA polymerase alpha-primase complex K02321 POLA2; DNA polymerase alpha subunit B D PAS_chr4_0323 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair K02684 PRI1; DNA primase small subunit [EC:2.7.7.102] D PAS_chr2-1_0512 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair K02685 PRI2; DNA primase large subunit D PAS_chr1-3_0083 Catalytic subunit of DNA polymerase (II) epsilon K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] D PAS_chr3_0765 Second largest subunit of DNA polymerase II (DNA polymerase epsilon) K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] D PAS_chr2-1_0100 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] D PAS_chr2-1_0620 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] D PAS_chr2-1_0163 Catalytic subunit of DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] D PAS_chr2-1_0395 DNA polymerase III (delta) subunit, essential for cell viability K02328 POLD2; DNA polymerase delta subunit 2 D PAS_chr1-4_0146 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 D PAS_chr3_0703 DNA polymerase gamma K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7] D PAS_chr1-1_0113 Subunit of heterotrimeric Replication Protein A (RPA) K07466 RFA1; replication factor A1 D PAS_chr4_0034 Subunit of heterotrimeric Replication Protein A (RPA) K10739 RFA2; replication factor A2 D PAS_chr3_0961 hypothetical protein K10740 RPA3; replication factor A3 D PAS_chr1-4_0269 Replication factor C subunit K10754 RFC1; replication factor C subunit 1 D PAS_chr1-3_0030 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0619 Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0069 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase T K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0556 Replication factor C K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-1_0366 Ribonuclease H1 K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PAS_chr1-1_0049 Ribonuclease H2 catalytic subunit, removes RNA primers during Okazaki fragment synthesis K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4] D PAS_chr1-1_0499 hypothetical protein K10745 RNASEH2C; ribonuclease H2 subunit C D PAS_chr3_0233 Proliferating cell nuclear antigen (PCNA) K04802 PCNA; proliferating cell nuclear antigen D PAS_chr4_0279 Essential tripartite DNA replication factor with single-stranded DNA-dependent ATPase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] D PAS_chr1-1_0207 Hexameric DNA polymerase alpha-associated DNA helicase A involved in lagging strand DNA synthesis K19783 HCS1; DNA polymerase alpha-associated DNA helicase A [EC:5.6.2.3] D PAS_chr1-4_0633 5' to 3' exonuclease, 5' flap endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PAS_chr3_1112 DNA ligase found in the nucleus and mitochondria K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PAS_chr1-4_0671 hypothetical protein K11117 STN1; protein STN1 D PAS_chr1-1_0156 hypothetical protein K11118 RIF1; RAP1-interacting factor 1 D PAS_chr1-1_0374 Conserved NAD+ dependent histone deacetylase of the Sirtuin family K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr1-4_0315 Member of silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr4_0474 Member of the Sir2 family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr2-1_0513 Member of the Sir2 family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr1-3_0252 DNA-binding protein involved in either activation or repression of transcription K09426 RAP1; Myb-like DNA-binding protein RAP1 D PAS_chr2-1_0444 hypothetical protein K09426 RAP1; Myb-like DNA-binding protein RAP1 D PAS_chr2-1_0373 Reverse transcriptase subunit of the telomerase holoenzyme K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49] D PAS_chr2-1_0648 Protein component of the H/ACA snoRNP pseudouridylase complex K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D PAS_chr4_0796 Nuclear protein related to mammalian high mobility group (HMG) proteins K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D PAS_chr4_0747 Constituent of small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D PAS_chr2-2_0149 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D PAS_chr4_0481 Protein involved in inhibition of translation and nonsense-mediated decay K11132 EST1; telomere elongation protein [EC:2.7.7.-] D PAS_chr1-1_0193 hypothetical protein K11133 EST3; telomere replication protein D PAS_chr1-4_0686 Small nuclear ribonucleoprotein-associated protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' D PAS_chr4_0781 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1 D PAS_chr1-4_0228 Core Sm protein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2 D PAS_chr1-4_0614 Core Sm protein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 D PAS_chr2-1_0138 Core Sm protein Sm E K11097 SNRPE; small nuclear ribonucleoprotein E D PAS_chr2-2_0429 Core Sm protein Sm F K11098 SNRPF; small nuclear ribonucleoprotein F D PAS_FragB_0004 Small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G D PAS_chr3_0046 Protein required for S phase progression and telomere homeostasis, forms an alternative replication K11134 ELG1; telomere length regulation protein D PAS_chr3_0851 Subunit of a complex with Rad50p and Xrs2p (MRX complex) K10865 MRE11; double-strand break repair protein MRE11 D PAS_chr1-4_0513 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D PAS_chr1-3_0143 Protein kinase primarily involved in telomere length regulation K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D PAS_FragB_0056 ATP-dependent helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4] D PAS_chr2-2_0184 Single-stranded DNA endonuclease (with Rad10p) K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D PAS_chr1-3_0228 Essential protein involved in rRNA and snoRNA maturation K11135 PINX1; Pin2-interacting protein X1 D PAS_chr3_0147 Essential DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for K11137 TELO2; telomere length regulation protein D PAS_chr2-1_0228 DNA helicase involved in rDNA replication and Ty1 transposition K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D PAS_chr2-1_0439 DNA helicase involved in telomere formation and elongation K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D PAS_chr4_0837 hypothetical protein K25186 RTF2; replication termination factor 2 D PAS_chr1-4_0281 Telobox-containing general regulatory factor K22485 TBF1; protein TBF1 D PAS_chr3_0242 Topoisomerase I K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1] D PAS_chr1-1_0242 DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ppa03036] D PAS_chr2-1_0082 Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an K06636 SMC1; structural maintenance of chromosome 1 D PAS_chr2-2_0306 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells K06669 SMC3; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) D PAS_chr4_0641 Essential protein required for sister chromatid cohesion in mitosis and meiosis K06670 SCC1; cohesin complex subunit SCC1 D PAS_chr3_0540 Subunit of the cohesin complex K06671 STAG1_2; cohesin complex subunit SA-1/2 D PAS_chr3_1186 hypothetical protein K06672 SCC2; cohesin loading factor subunit SCC2 D PAS_chr3_0173 Protein required for establishment and maintenance of sister chromatid condensation and cohesion K11267 PDS5; sister chromatid cohesion protein PDS5 D PAS_chr3_0914 Acetyltransferase required for the establishment of sister chromatid cohesion K11268 ESCO; N-acetyltransferase [EC:2.3.1.-] D PAS_chr3_0654 Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C K11269 CTF18; chromosome transmission fidelity protein 18 D PAS_chr2-1_0754 hypothetical protein K11270 CTF8; chromosome transmission fidelity protein 8 D PAS_chr1-1_0450 Subunit of a complex with Ctf8p and Ctf18p that shares some components with Replication Factor C K11271 DSCC1; sister chromatid cohesion protein DCC1 D PAS_chr1-3_0030 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0619 Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0069 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase T K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0556 Replication factor C K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr2-2_0013 Subunit of a replication-pausing checkpoint complex (Tof1p-Mrc1p-Csm3p) K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 D PAS_chr4_0244 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3 D PAS_chr1-1_0329 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1 D PAS_chr3_0629 Conserved nuclear protein required to establish sister-chromatid pairing during S-phase K11273 DDX11; chromosome transmission fidelity protein 1 [EC:5.6.2.7] D PAS_chr3_0205 Chromatin-associated protein K11274 WDHD1; chromosome transmission fidelity protein 4 D PAS_chr1-3_0090 Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p) K20791 NAA10_11; N-alpha-acetyltransferase 10/11 [EC:2.3.1.255] D PAS_chr1-1_0373 Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p) K20792 NAA15_16; N-alpha-acetyltransferase 15/16, NatA auxiliary subunit D PAS_chr3_1166 hypothetical protein K12780 REC8; meiotic recombination protein REC8, fungi type D PAS_chr1-3_0143 Protein kinase primarily involved in telomere length regulation K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D PAS_chr1-4_0179 Meiosis-specific protein that initiates meiotic recombination K10878 SPO11; meiotic recombination protein SPO11 D PAS_chr1-4_0282 Histone H1, a linker histone required for nucleosome packaging at restricted sites K11275 H1_5; histone H1/5 D PAS_chr4_0157 Histone variant H2AZ, exchanged for histone H2A in nucleosomes by the SWR1 complex K11251 H2A; histone H2A D PAS_chr2-1_0429 One of two nearly identical (see also HTA1) histone H2A subtypes K11251 H2A; histone H2A D PAS_chr2-1_0428 One of two nearly identical (see HTB1) histone H2B subtypes K11252 H2B; histone H2B D PAS_chr2-2_0199 One of two identical histone H3 proteins (see also HHT2) K11253 H3; histone H3 D PAS_chr2-2_0200 One of two identical histone H4 proteins (see also HHF2) K11254 H4; histone H4 D PAS_chr2-2_0172 Protein that interacts with mitotic cyclin Clb2p K11279 NAP1L1; nucleosome assembly protein 1-like 1 D PAS_chr3_0814 hypothetical protein K10750 CHAF1A; chromatin assembly factor 1 subunit A D PAS_chr3_0248 Component of the chromatin assembly complex (with Rlf2p and Msi1p) K10751 CHAF1B; chromatin assembly factor 1 subunit B D PAS_chr3_1191 hypothetical protein K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr2-1_0271 Subunit of the Hat1p-Hat2p histone acetyltransferase complex K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr2-1_0205 Subunit of the Hat1p-Hat2p histone acetyltransferase complex K10752 RBBP4; histone-binding protein RBBP4 D PAS_chr1-1_0018 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) K09272 SSRP1; FACT complex subunit SSRP1/POB3 D PAS_chr1-4_0529 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) K25639 SUPT16H; FACT complex subunit SPT16 D PAS_chr4_0069 Nucleosome assembly factor, involved in chromatin assembly and disassembly K10753 ASF1; histone chaperone ASF1 D PAS_chr4_0308 Transcription elongation factor K11292 SUPT6H; transcription elongation factor SPT6 D PAS_chr2-2_0246 Subunit of the HIR complex, a nucleosome assembly complex involved in histone gene transcription K11293 HIRA; protein HIRA/HIR1 D PAS_chr3_1163 hypothetical protein K11293 HIRA; protein HIRA/HIR1 D PAS_chr4_0185 Nucleolar protein that binds nuclear localization sequences K11294 NCL; nucleolin D PAS_chr3_0228 Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex K11303 HAT1; histone acetyltransferase 1 [EC:2.3.1.48] D PAS_chr3_1128 Histone acetyltransferase, acetylates N-terminal lysines on histones H2B and H3 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] D PAS_chr1-4_0012 TFIID subunit (145 kDa) K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48] D PAS_chr4_0084 Histone acetyltransferase catalytic subunit of the native multisubunit complex (NuA4) K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48] D PAS_chr3_0749 Histone acetyltransferase critical for cell survival in the presence of DNA damage during S phase K11309 RTT109; regulator of Ty1 transposition protein 109 D PAS_chr2-1_0251 N alpha-acetyl-transferase, involved in acetylation of the N-terminal residues of histones H4 and H2 K20794 NAA40; N-alpha-acetyltransferase 40 [EC:2.3.1.257] D PAS_chr1-4_0571 Transcription-associated protein K08874 TRRAP; transformation/transcription domain-associated protein D PAS_chr3_0051 Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to act K11313 SUPT3H; transcription initiation protein SPT3 D PAS_chr2-1_0780 Transcription coactivator, component of the ADA and SAGA transcriptional adaptor/HAT complexes K11314 TADA2A; transcriptional adapter 2-alpha D PAS_chr2-2_0284 Transcriptional regulator involved in glucose repression of Gal4p-regulated genes K11315 TADA3; transcriptional adapter 3 D PAS_chr3_0453 Subunit (90 kDa) of TFIID and SAGA complexes K03130 TAF5; transcription initiation factor TFIID subunit 5 D PAS_chr1-1_0095 Subunit (60 kDa) of TFIID and SAGA complexes K03131 TAF6; transcription initiation factor TFIID subunit 6 D PAS_chr2-1_0142 Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation K03133 TAF9B; transcription initiation factor TFIID subunit 9B D PAS_chr1-4_0182 Subunit (145 kDa) of TFIID and SAGA complexes K03134 TAF10; transcription initiation factor TFIID subunit 10 D PAS_chr2-1_0588 Subunit (61/68 kDa) of TFIID and SAGA complexes K03126 TAF12; transcription initiation factor TFIID subunit 12 D PAS_chr3_0992 Protein involved in pre-mRNA splicing K12830 SF3B3; splicing factor 3B subunit 3 D PAS_chr2-2_0295 TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation K03128 TAF2; transcription initiation factor TFIID subunit 2 D PAS_FragD_0016 TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation K03132 TAF7; transcription initiation factor TFIID subunit 7 D PAS_chr4_0100 Component of NuA4, which is an essential histone H4/H2A acetyltransferase complex K11322 EPC; enhancer of polycomb-like protein D PAS_chr2-1_0370 Component of the Swr1p complex that incorporates Htz1p into chromatin K11324 DMAP1; DNA methyltransferase 1-associated protein 1 D PAS_chr4_0475 Essential protein involved in transcription regulation K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4] D PAS_chr2-1_0688 Essential protein involved in transcription regulation K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3] D PAS_chr2-1_0356 Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex K11339 MORF4L1; mortality factor 4-like protein 1 D PAS_chr4_0376 Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 complex K11341 YEATS4; YEATS domain-containing protein 4 D PAS_chr1-4_0084 Chromatin modification-related protein EAF6 K11344 MEAF6; chromatin modification-related protein EAF6 D PAS_chr3_0713 Subunit of the SAGA transcriptional regulatory complex, involved in proper assembly of the complex K11359 SPT7; transcriptional activator SPT7 D PAS_chr1-4_0365 Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SAL K11360 SPT8; transcriptional activator SPT8 D PAS_chr1-4_0620 hypothetical protein K11361 SPT20; transcription factor SPT20 D PAS_FragB_0044 Transcriptional coactivator HFI1/ADA1 K11362 HFI1; transcriptional coactivator HFI1/ADA1 D PAS_chr2-2_0251 hypothetical protein K11363 SGF11; SAGA-associated factor 11 D PAS_chr1-1_0454 SaGa associated Factor 29kDa K11364 SGF29; SAGA-associated factor 29 D PAS_chr1-4_0651 Subunit of SAGA histone acetyltransferase complex K11365 SGF73; SAGA-associated factor 73 D PAS_chr1-4_0341 Ubiquitin-specific protease K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] D PAS_chr2-1_0095 Nucleosome remodeling factor that functions in regulation of transcription elongation K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] D PAS_chr2-1_0761 Protein involved in mRNA export coupled transcription activation K11368 ENY2; enhancer of yellow 2 transcription factor D PAS_chr3_0452 Sensor of mitochondrial dysfunction K11369 RTG2; retrograde regulation protein 2 D PAS_chr1-3_0296 hypothetical protein K11370 AHC1; ADA HAT complex component 1 D PAS_chr3_0884 Subunit of a heterodimeric NC2 transcription regulator complex with Bur6p K21751 DR1; down-regulator of transcription 1 D PAS_chr2-1_0430 Essential subunit of the COMPASS (Set1C) complex K14963 WDR5; COMPASS component SWD3 D PAS_chr4_0549 hypothetical protein K11372 HIF1; HAT1-interacting factor 1 D PAS_chr2-2_0213 Histone acetyltransferase catalytic subunit of NuA3 complex that acetylates histone H3, involved in K11378 SAS3; histone acetyltransferase SAS3 [EC:2.3.1.48] D PAS_chr1-4_0265 hypothetical protein K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit D PAS_FragD_0029 Subunit of the NuA3 histone acetyltransferase complex that acetylates histone H3 K11380 NTO1; NuA3 HAT complex component NTO1 D PAS_chr2-1_0321 Subunit of the NuA4 histone acetyltransferase complex that acetylates histone H4 and H2A K11396 YNG2; chromatin modification-related protein YNG2 D PAS_chr4_0298 Component of the NuA4 histone acetyltransferase complex K11397 EAF1; chromatin modification-related protein VID21 D PAS_chr1-4_0169 actin K11400 ARP4; actin-related protein 4 D PAS_chr3_0345 Histone acetyltransferase (HAT) catalytic subunit of the SAS complex (Sas2p-Sas4p-Sas5p) K11401 SAS2; histone acetyltransferase SAS2 [EC:2.3.1.48] D PAS_chr1-4_0332 hypothetical protein K11402 SAS4; something about silencing protein 4 D PAS_chr1-4_0125 Histone deacetylase K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] D PAS_chr2-2_0016 Histone deacetylase K11483 HOS2; histone deacetylase HOS2 [EC:3.5.1.98] D PAS_chr2-1_0302 Putative catalytic subunit of a class II histone deacetylase complex K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] D PAS_chr2-2_0049 NAD(+)-dependent histone deacetylase K11415 SIRT5; NAD-dependent protein deacetylase sirtuin 5 [EC:2.3.1.286] D PAS_chr3_0245 Component of the Sin3p-Rpd3p histone deacetylase complex K11644 SIN3A; paired amphipathic helix protein Sin3a D PAS_chr3_0250 Subunit of a histone deacetylase complex K19202 SAP30; histone deacetylase complex subunit SAP30 D PAS_chr1-4_0201 WD40 repeat-containing subunit of the Set3C histone deacetylase complex K04508 TBL1; transducin (beta)-like 1 D PAS_chr3_0174 Essential subunit of the histone deacetylase Rpd3S complex K26244 PHF12; transcriptional regulatory protein PHF12/RCO1 D PAS_chr4_0679 Probable component of the Rpd3 histone deacetylase complex K26245 PHO23; transcriptional regulatory protein PHO23 D PAS_chr1-1_0102 Histone methyltransferase with a role in transcriptional elongation K06101 ASH1L; [histone H3]-lysine4 N-trimethyltransferase ASH1L [EC:2.1.1.354] D PAS_chr3_1133 Nucleosomal histone H3-Lys79 methylase, associates with transcriptionally active genes K11427 DOT1L; [histone H3]-lysine79 N-trimethyltransferase [EC:2.1.1.360] D PAS_chr2-2_0494 hypothetical protein K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] D PAS_chr2-1_0517 Nuclear protein that contains a SET-domain K05302 SETD6; N-lysine methyltransferase SETD6 [EC:2.1.1.-] D PAS_chr1-4_0287 Histone methyltransferase K23700 SET2; [histone H3]-lysine36 N-trimethyltransferase [EC:2.1.1.359] D PAS_chr1-3_0033 Nuclear SAM-dependent mono-and asymmetric arginine dimethylating methyltransferase K11434 PRMT1; type I protein arginine methyltransferase [EC:2.1.1.319] D PAS_chr2-2_0491 hypothetical protein K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320] D PAS_chr1-4_0106 Arginine methyltransferase K18477 RMT2; type IV protein arginine methyltransferase [EC:2.1.1.322] D PAS_chr2-1_0206 Subunit of COMPASS (Set1C), a complex which methylates histone H3 on lysine 4 and is required in tel K14960 CXXC1; COMPASS component SPP1 D PAS_chr1-4_0607 COMPASS component SWD1 K14961 RBBP5; COMPASS component SWD1 D PAS_chr1-1_0206 Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 K14962 WDR82; COMPASS component SWD2 D PAS_chr2-1_0399 hypothetical protein K14967 BRE2; COMPASS component BRE2 D PAS_chr1-4_0610 hypothetical protein K14969 SHG1; COMPASS component SHG1 D PAS_chr1-1_0295 JmjC domain family histone demethylase specific for H3-K36 K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27] D PAS_chr2-2_0166 JmjC domain family histone demethylase K11446 KDM5; [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67] D PAS_chr3_1258 hypothetical protein K03094 SKP1; S-phase kinase-associated protein 1 D PAS_chr4_0402 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_chr2-2_0247 Beta' regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta D PAS_FragB_0054 WD repeat-containing protein K11805 DCAF7; DDB1- and CUL4-associated factor 7 D PAS_chr1-1_0374 Conserved NAD+ dependent histone deacetylase of the Sirtuin family K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr1-4_0315 Member of silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr4_0474 Member of the Sir2 family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr2-1_0513 Member of the Sir2 family of NAD(+)-dependent protein deacetylases K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286] D PAS_chr1-3_0072 Splicing factor that reanneals U4 and U6 snRNPs during spliceosome recycling K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3 D PAS_chr1-3_0226 Beta-1,3-glucanosyltransferase, required for cell wall assembly K22832 GAS1; 1,3-beta-glucanosyltransferase GAS1 [EC:2.4.1.-] D PAS_chr1-3_0227 Beta-1,3-glucanosyltransferase, required for cell wall assembly K22832 GAS1; 1,3-beta-glucanosyltransferase GAS1 [EC:2.4.1.-] D PAS_chr3_0306 1,3-beta-glucanosyltransferase K22833 GAS2; 1,3-beta-glucanosyltransferase GAS2 [EC:2.4.1.-] D PAS_chr3_0184 1,3-beta-glucanosyltransferase K22835 GAS4; 1,3-beta-glucanosyltransferase GAS4 [EC:2.4.1.-] D PAS_chr4_0109 Component of the condensin complex, essential SMC chromosomal ATPase family member K06674 SMC2; structural maintenance of chromosome 2 D PAS_chr2-2_0416 Subunit of the condensin complex, which reorganizes chromosomes during cell division K06675 SMC4; structural maintenance of chromosome 4 D PAS_chr2-1_0367 Essential protein required for chromosome condensation K06676 BRRN1; condensin complex subunit 2 D PAS_chr3_0265 Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p) K06677 YCS4; condensin complex subunit 1 D PAS_chr2-1_0627 Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p) K06678 YCG1; condensin complex subunit 3 D PAS_chr4_0702 Nucleotide exchange factor for Gsp1p, localizes to the nucleus K11493 RCC1; regulator of chromosome condensation D PAS_chr2-1_0721 Centromere protein that resembles histones, required for proper kinetochore function K11495 CENPA; histone H3-like centromeric protein A D PAS_chr1-1_0500 hypothetical protein K11497 CENPC; centromere protein C D PAS_chr4_0091 Kinesin-related motor protein involved in mitotic spindle positioning K11498 CENPE; centromeric protein E D PAS_chr1-4_0687 hypothetical protein K11501 CENPI; centromere protein I D PAS_chr1-4_0203 Component of the evolutionarily conserved kinetochore-associated Ndc80 complex K11547 NDC80; kinetochore protein NDC80 D PAS_chr1-3_0242 Component of the evolutionarily conserved kinetochore-associated Ndc80 complex K11548 NUF2; kinetochore protein Nuf2 D PAS_chr3_0211 Outer kinetochore protein required for chromosome stability K11551 MIS15; central kinetochore subunit Mis15/CHL4 D PAS_chr2-1_0386 Protein involved in minichromosome maintenance K11552 MAL2; central kinetochore subunit Mal2/MCM21 D PAS_chr4_0024 hypothetical protein K11553 DAD1; DASH complex subunit DAD1 D PAS_chr1-4_0483 hypothetical protein K11557 SPC24; kinetochore protein Spc24, fungi type D PAS_chr4_0867 hypothetical protein K11558 SPC25; kinetochore protein Spc25, fungi type D PAS_chr3_0708 Essential component of the MIND kinetochore complex (Mtw1p Including Nnf1p-Nsl1p-Dsn1p) K11559 mis12; kinetochore protein Mis12/MTW1 D PAS_chr2-1_0475 hypothetical protein K11560 mis13; kinetochore protein Mis13/DSN1 D PAS_chr2-1_0686 hypothetical protein K11561 mis14; kinetochor protein Mis14/NSL1 D PAS_chr2-1_0724 hypothetical protein K11562 NNF1; kinetochore protein NNF1 D PAS_chr1-1_0139 Protein required for accurate chromosome segregation K11563 SPC7; kinetochore protein Spc7/SPC105 D PAS_chr3_0055 hypothetical protein K11566 ASK1; DASH complex subunit ASK1 D PAS_chr3_0994 hypothetical protein K11567 DAD2; DASH complex subunit DAD2 D PAS_chr4_0748 hypothetical protein K11569 DAD4; DASH complex subunit DAD4 D PAS_chr4_0129 hypothetical protein K02307 DAM1; DASH complex subunit DAM1 D PAS_chr3_0389 hypothetical protein K11572 SPC19; DASH complex subunit SPC19 D PAS_chr2-1_0416 Protein kinase that forms a complex with Mad1p and Bub3p K02178 BUB1; checkpoint serine/threonine-protein kinase [EC:2.7.11.1] D PAS_chr2-1_0515 Kinetochore checkpoint WD40 repeat protein K02180 BUB3; cell cycle arrest protein BUB3 D PAS_chr1-3_0088 hypothetical protein K11578 ZW10; protein transport protein DSL1/ZW10 D PAS_chr1-4_0443 hypothetical protein K10415 DYNC1I; dynein cytoplasmic 1 intermediate chain D PAS_chr3_0459 Dual-specificity kinase K08866 TTK; serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1] D PAS_chr4_0530 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr2-1_0872 hypothetical protein K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr1-4_0451 protein kinase K20872 NEK2; serine/threonine-protein kinase Nek2 [EC:2.7.11.1] D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr4_0494 Regulatory subunit A of the heterotrimeric protein phosphatase 2A K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A D PAS_chr2-1_0831 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B D PAS_chr2-2_0274 B-type regulatory subunit of protein phosphatase 2A (PP2A) K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D PAS_chr1-4_0653 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 D PAS_chr4_0140 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] D PAS_chr3_0432 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D PAS_chr1-4_0007 Cytoplasmic DExD/H-box helicase K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] D PAS_chr4_0127 RNAase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAS_chr4_0654 Karyopherin involved in nuclear import and export K14289 XPO5; exportin-5 D PAS_chr4_0388 Mitochondrial ribosomal protein of the large subunit K16466 CETN3; centrin-3 D PAS_chr4_0404 Protein kinase K16315 GSG2; serine/threonine-protein kinase haspin [EC:2.7.11.1] D PAS_chr1-4_0368 Protein kinase required for signal transduction during entry into meiosis K03083 GSK3B; glycogen synthase kinase 3 beta [EC:2.7.11.26] D PAS_chr1-4_0357 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr3_0964 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] D PAS_chr4_0148 Gamma-tubulin K10389 TUBG; tubulin gamma D PAS_chr2-1_0377 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex K16569 TUBGCP2; gamma-tubulin complex component 2 D PAS_chr2-2_0354 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex K16570 TUBGCP3; gamma-tubulin complex component 3 D PAS_chr2-1_0186 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0623 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0533 Beta-tubulin K07375 TUBB; tubulin beta D PAS_chr4_0389 Large subunit of the dynactin complex K04648 DCTN1; dynactin 1 D PAS_chr3_1019 hypothetical protein K10426 DCTN4; dynactin 4 D PAS_chr1-1_0263 Actin-related protein of the dynactin complex K16575 ACTR1; centractin D PAS_chr3_0913 Component of the mitotic spindle that binds to interpolar microtubules K16578 CLASP1_2; CLIP-associating protein 1/2 D PAS_chr4_0999 hypothetical protein K10436 MAPRE; microtubule-associated protein, RP/EB family D PAS_chr2-1_0758 Calmodulin K02183 CALM; calmodulin D PAS_chr2-2_0435 hypothetical protein K02183 CALM; calmodulin D PAS_chr4_0226 P-loop ATPase with similarity to human OLA1 and bacterial YchF K19788 OLA1; obg-like ATPase 1 D PAS_chr1-4_0053 hypothetical protein K19788 OLA1; obg-like ATPase 1 D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_chr2-2_0243 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus K14290 XPO1; exportin-1 D PAS_chr3_0325 Essential splicesome assembly factor K12869 CRN; crooked neck D PAS_chr2-2_0339 Component of the hexameric MCM complex K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3] D PAS_chr4_0526 Largest subunit of the origin recognition complex K02603 ORC1; origin recognition complex subunit 1 D PAS_chr3_0941 Subunit of the origin recognition complex, which directs DNA replication K02604 ORC2; origin recognition complex subunit 2 D PAS_chr2-1_0331 Mitotic spindle midzone localized microtubule-associated protein (MAP) family member K16732 PRC1; Ase1/PRC1/MAP65 family protein D PAS_chr4_0262 GTP-binding protein involved in beta-tubulin (Tub2p) folding K07943 ARL2; ADP-ribosylation factor-like protein 2 D PAS_chr2-1_0112 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04393 CDC42; cell division control protein 42 D PAS_chr4_0695 Essential 70kDa subunit of the exocyst complex K07195 EXOC7; exocyst complex component 7 D PAS_chr4_0223 Protein involved in DNA replication K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3] D PAS_chr2-1_0149 Protein involved in DNA replication K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3] D PAS_chr3_0143 Secretory vesicle-associated Rab GTPase essential for exocytosis K07901 RAB8A; Ras-related protein Rab-8A D PAS_chr2-1_0132 hypothetical protein K21763 MAPKBP1; mitogen-activated protein kinase binding protein 1 D PAS_chr4_0241 Putative ATPase of the AAA family K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-] D PAS_chr1-4_0427 hypothetical protein K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D PAS_chr3_0767 Nuclear envelope protein that mediates the nuclear export of importin alpha (Srp1p) K18423 CSE1; exportin-2 (importin alpha re-exporter) D PAS_chr4_0160 Kinesin-related motor protein required for mitotic spindle assembly and chromosome segregation K10398 KIF11; kinesin family member 11 D PAS_chr4_0900 Kinesin-like protein K10405 KIFC1; kinesin family member C1 D PAS_chr3_0612 Karyopherin alpha homolog, forms a dimer with karyopherin beta Kap95p K15042 KPNA5_6; importin subunit alpha-6/7 D PAS_chr4_0263 Karyopherin beta, forms a dimeric complex with Srp1p (Kap60p) K14293 KPNB1; importin subunit beta-1 D PAS_chr3_1039 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) K14304 NUP85; nuclear pore complex protein Nup85 D PAS_chr1-1_0232 Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore K14297 NUP98; nuclear pore complex protein Nup98-Nup96 D PAS_chr3_1070 Subunit of the nuclear pore complex (NPC) K14301 NUP107; nuclear pore complex protein Nup107 D PAS_chr3_0993 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) K14300 NUP133; nuclear pore complex protein Nup133 D PAS_chr2-2_0270 Essential structural subunit of the nuclear pore complex (NPC) K14310 NUP205; nuclear pore complex protein Nup205 D PAS_chr3_0229 hypothetical protein K20724 TMEM33; transmembrane protein 33 D PAS_chr4_0551 hypothetical protein K20724 TMEM33; transmembrane protein 33 D PAS_chr3_1092 Protein involved in nuclear migration, part of the dynein/dynactin pathway K16794 PAFAH1B1; platelet-activating factor acetylhydrolase IB subunit alpha D PAS_chr4_0710 Component of the nuclear pore complex K14298 RAE1; mRNA export factor D PAS_chr4_0282 Microtubule-associated protein (MAP) of the XMAP215/Dis1 family K24394 STU2; protein STU2 D PAS_chr1-4_0541 Separase, a caspase-like cysteine proteas K02365 ESP1; separase [EC:3.4.22.49] D PAS_chr1-4_0020 Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03348 APC1; anaphase-promoting complex subunit 1 D PAS_chr2-1_0604 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03349 APC2; anaphase-promoting complex subunit 2 D PAS_chr1-3_0148 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03350 APC3; anaphase-promoting complex subunit 3 D PAS_chr3_0477 hypothetical protein K03351 APC4; anaphase-promoting complex subunit 4 D PAS_chr1-4_0197 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03353 APC6; anaphase-promoting complex subunit 6 D PAS_chr3_1078 Subunit of the anaphase-promoting complex/cyclosome (APC/C) K03355 APC8; anaphase-promoting complex subunit 8 D PAS_chr3_1218 hypothetical protein K03357 APC10; anaphase-promoting complex subunit 10 D PAS_chr3_0293 Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) K03358 APC11; anaphase-promoting complex subunit 11 D PAS_chr1-4_0662 hypothetical protein K08850 AURKX; aurora kinase, other [EC:2.7.11.1] D PAS_chr2-1_0288 hypothetical protein K16833 PPP1R2; protein phosphatase inhibitor 2 D PAS_c131_0004 hypothetical protein K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1] D PAS_chr3_1159 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 D PAS_chr2-2_0383 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] D PAS_chr4_0128 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] D PAS_chr2-1_0100 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] D PAS_chr2-1_0629 Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion K10841 ERCC6; DNA excision repair protein ERCC-6 D PAS_chr4_0618 One of two type I myosins K10356 MYO1; myosin I D PAS_chr2-1_0868 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7] D PAS_chr2-1_0418 U2-snRNP associated splicing factor K12828 SF3B1; splicing factor 3B subunit 1 D PAS_chr4_0143 Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex K11661 SRCAP; helicase SRCAP/SWR1 [EC:5.6.2.-] D PAS_chr1-1_0020 Actin-like protein K11662 ACTR6; actin-related protein 6 D PAS_chr3_0057 hypothetical protein K11663 ZNHIT1; zinc finger HIT domain-containing protein 1 D PAS_chr3_1158 hypothetical protein K11664 VPS72; vacuolar protein sorting-associated protein 72 D PAS_chr1-1_0087 ATPase that forms a large complex, containing actin and several actin-related proteins K11665 INO80; chromatin-remodeling ATPase INO80 [EC:5.6.2.-] D PAS_chr4_0370 Protein that associates with the INO80 chromatin remodeling complex under low-salt conditions K11667 INO80C; INO80 complex subunit C D PAS_chr2-2_0068 Nuclear actin-related protein involved in chromatin remodeling K11672 ACTR5; actin-related protein 5 D PAS_chr3_0047 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en K11673 ACTR8; actin-related protein 8 D PAS_FragB_0005 Ino eighty subunit 1 K11675 IES1; Ino eighty subunit 1 D PAS_chr2-1_0036 hypothetical protein K11676 IES2; Ino eighty subunit 2 D PAS_chr1-1_0442 Protein related to mammalian high mobility group proteins K11680 NHP10; non-histone protein 10 D PAS_chr2-2_0050 Component of the RSC chromatin remodeling complex K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2 D PAS_chr3_0068 Component of the RSC chromatin remodeling complex K11759 RSC4; chromatin structure-remodeling complex subunit RSC4 D PAS_chr1-4_0650 Chromatin structure-remodeling complex protein RSC7 K11761 NPL6; chromatin structure-remodeling complex protein RSC7 D PAS_chr3_0544 Component of the RSC chromatin remodeling complex K11762 RSC8; chromatin structure-remodeling complex subunit RSC8 D PAS_chr2-1_0193 Component of the RSC chromatin remodeling complex K11763 RSC9; chromatin structure-remodeling complex subunit RSC9 D PAS_chr3_1179 hypothetical protein K11766 RSC58; chromatin structure-remodeling complex subunit RSC58 D PAS_chr1-4_0085 Actin-related protein K11767 ARP7; actin-related protein 7 D PAS_chr2-1_0720 Component of both the SWI/SNF and RSC chromatin remodeling complexes K11768 ARP9; actin-related protein 9 D PAS_chr2-1_0375 Component of the RSC chromatin remodeling complex K11770 SFH1; chromatin structure-remodeling complex subunit SFH1 D PAS_FragD_0018 Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] D PAS_chr2-2_0128 ATPase component of the RSC chromatin remodeling complex K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] D PAS_chr2-2_0471 hypothetical protein K11771 SWI1; SWI/SNF chromatin-remodeling complex subunit SWI1 D PAS_chr1-4_0309 Subunit of the SWI/SNF chromatin remodeling complex K11772 SWI3; SWI/SNF complex subunit SWI3 D PAS_chr2-1_0821 hypothetical protein K11775 SNF12; SWI/SNF complex component SWP73 D PAS_chr1-1_0244 hypothetical protein K11682 SWC3; SWR1-complex protein 3 D PAS_chr1-4_0220 Protein involved in transcription initiation at TATA-containing promoters K11684 BDF1; bromodomain-containing factor 1 D PAS_chr3_0147 Essential DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for K11137 TELO2; telomere length regulation protein D PAS_chr1-1_0077 hypothetical protein K20403 TTI1; TELO2-interacting protein 1 D PAS_chr4_0875 Putative protein of unknown function K24767 ASA1; ASTRA-associated protein 1 D PAS_chr1-1_0238 Protein whose overexpression affects chromosome stability, potential Cdc28p substrate K14439 SMARCAD1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-] D PAS_chr3_0545 Putative ATPase containing the DEAD/H helicase-related sequence motif K19001 HELLS; ATP-dependent DNA helicase D PAS_chr3_0908 Mitochondrial protein, forms a heterodimer complex with Mss1p K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PAS_chr1-4_0564 Iron-sulfur protein IND1 K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:ppa03400] D PAS_chr2-2_0254 DNA repair methyltransferase (6-O-methylguanine-DNA methylase) K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PAS_chr3_1105 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PAS_chr2-2_0280 Mitochondrial glycosylase/lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D PAS_chr4_0492 DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in base excision repair K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PAS_chr3_0810 Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] D PAS_chr1-3_0055 Class II abasic (AP) endonuclease involved in repair of DNA damage K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2] D PAS_chr2-1_0163 Catalytic subunit of DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] D PAS_chr2-1_0395 DNA polymerase III (delta) subunit, essential for cell viability K02328 POLD2; DNA polymerase delta subunit 2 D PAS_chr1-4_0146 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 D PAS_chr1-3_0083 Catalytic subunit of DNA polymerase (II) epsilon K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] D PAS_chr3_0765 Second largest subunit of DNA polymerase II (DNA polymerase epsilon) K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] D PAS_chr2-1_0100 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] D PAS_chr2-1_0620 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] D PAS_chr3_0233 Proliferating cell nuclear antigen (PCNA) K04802 PCNA; proliferating cell nuclear antigen D PAS_chr1-4_0633 5' to 3' exonuclease, 5' flap endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PAS_chr3_1112 DNA ligase found in the nucleus and mitochondria K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PAS_chr1-1_0480 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] D PAS_chr1-1_0386 DNA 3'-phosphatase that functions in repair of endogenous damage of double-stranded DNA K08075 E3.1.3.32; polynucleotide 3'-phosphatase [EC:3.1.3.32] D PAS_chr1-1_0025 DNA repair protein K10838 XPC; xeroderma pigmentosum group C-complementing protein D PAS_chr2-2_0445 Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (with Rad4p) K10839 RAD23; UV excision repair protein RAD23 D PAS_chr4_0436 RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF) K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] D PAS_chr1-4_0609 Cullin, structural protein of SCF complexes K10609 CUL4; cullin 4 D PAS_chr2-2_0443 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) K15082 RAD7; DNA repair protein RAD7 D PAS_chr1-4_0154 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) K15083 RAD16; DNA repair protein RAD16 D PAS_chr3_0568 RNA polymerase II largest subunit B220 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] D PAS_chr2-1_0125 RNA polymerase II second largest subunit B150, part of central core K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] D PAS_chr4_0344 RNA polymerase II third largest subunit B44, part of central core K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 D PAS_chr2-2_0104 RNA polymerase II subunit B32 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 D PAS_chr3_0157 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 D PAS_chr2-2_0434 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 D PAS_chr4_0906 RNA polymerase II subunit K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D PAS_chr2-2_0309 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 D PAS_chr1-4_0359 RNA polymerase II subunit B12.6 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 D PAS_chr2-1_0223 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 D PAS_chr3_0244 RNA polymerase II subunit B12.5 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 D PAS_chr1-1_0166 RNA polymerase subunit, found in RNA polymerase complexes I, II, and III K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 D PAS_chr2-2_0308 Protein involved in DNA repair, related to the human CSA protein K10570 ERCC8; DNA excision repair protein ERCC-8 D PAS_chr2-1_0629 Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion K10841 ERCC6; DNA excision repair protein ERCC-6 D PAS_c121_0006 hypothetical protein K25829 ELOF1; transcription elongation factor 1 D PAS_chr1-4_0204 Component of the holoenzyme form of RNA polymerase transcription factor TFIIH K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D PAS_chr2-1_0797 5' to 3' DNA helicase, involved in nucleotide excision repair and transcription K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PAS_chr4_0745 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 D PAS_chr1-4_0245 Component of the core form of RNA polymerase transcription factor TFIIH K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 D PAS_chr2-1_0043 Subunit of TFIIH complex, involved in transcription initiation, similar to 34 kDa subunit of human T K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 D PAS_chr4_0238 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 D PAS_chr4_0061 Component of the RNA polymerase II general transcription and DNA repair factor TFIIH K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit D PAS_chr2-2_0041 Serine/threonine protein kinase, subunit of the transcription factor TFIIH K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] D PAS_chr3_0575 Cyclin associated with protein kinase Kin28p K06634 CCNH; cyclin H D PAS_chr4_0204 Subunit of TFIIH and nucleotide excision repair factor 3 complexes K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D PAS_chr1-1_0113 Subunit of heterotrimeric Replication Protein A (RPA) K07466 RFA1; replication factor A1 D PAS_chr4_0034 Subunit of heterotrimeric Replication Protein A (RPA) K10739 RFA2; replication factor A2 D PAS_chr3_0961 hypothetical protein K10740 RPA3; replication factor A3 D PAS_chr2-1_0702 Protein that recognizes and binds damaged DNA during nucleotide excision repair K10847 XPA; DNA-repair protein complementing XP-A cells D PAS_chr2-1_0195 Single-stranded DNA endonuclease (with Rad1p), cleaves single-stranded DNA during nucleotide excisio K10849 ERCC1; DNA excision repair protein ERCC-1 D PAS_chr2-2_0184 Single-stranded DNA endonuclease (with Rad10p) K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D PAS_chr4_0555 Single-stranded DNA endonuclease, cleaves single-stranded DNA during nucleotide excision repair K10846 ERCC5; DNA excision repair protein ERCC-5 D PAS_chr4_0118 DNA repair and TFIIH regulator K15075 MET18; DNA repair/transcription protein MET18/MMS19 D PAS_chr2-1_0369 Ubiquitin-protein ligase, member of the cullin family with similarity to Cdc53p and human CUL3 K03869 CUL3; cullin 3 D PAS_chr4_0565 hypothetical protein K15077 ELA1; elongin-A D PAS_chr1-4_0634 Protein that forms heterodimers with Msh3p and Msh6p K08735 MSH2; DNA mismatch repair protein MSH2 D PAS_chr1-4_0376 Mismatch repair protein K08736 MSH3; DNA mismatch repair protein MSH3 D PAS_chr2-1_0094 Protein required for mismatch repair in mitosis and meiosis, forms a complex with Msh2p to repair bo K08737 MSH6; DNA mismatch repair protein MSH6 D PAS_chr2-1_0165 Protein required for mismatch repair in mitosis and meiosis as well as crossing over during meiosis K08734 MLH1; DNA mismatch repair protein MLH1 D PAS_chr4_0124 ATP-binding protein required for mismatch repair in mitosis and meiosis K10858 PMS2; DNA mismatch repair protein PMS2 D PAS_chr1-4_0269 Replication factor C subunit K10754 RFC1; replication factor C subunit 1 D PAS_chr1-3_0030 replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0619 Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4 D PAS_chr2-1_0069 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase T K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0556 Replication factor C K10756 RFC3_5; replication factor C subunit 3/5 D PAS_chr1-4_0653 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 D PAS_chr3_0851 Subunit of a complex with Rad50p and Xrs2p (MRX complex) K10865 MRE11; double-strand break repair protein MRE11 D PAS_chr1-4_0513 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D PAS_chr3_0904 Strand exchange protein, forms a helical filament with DNA that searches for homology K04482 RAD51; DNA repair protein RAD51 D PAS_chr1-3_0025 strand exchange protein K10958 RAD57; DNA repair protein RAD57 D PAS_chr2-1_0153 Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA K10873 RAD52; DNA repair and recombination protein RAD52 D PAS_chr4_0087 Protein involved in the repair of double-strand breaks in DNA during vegetative growth K10959 RAD59; DNA repair protein RAD59 D PAS_chr3_0224 DNA-dependent ATPase K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] D PAS_FragB_0039 DNA-dependent ATPase K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-] D PAS_FragB_0056 ATP-dependent helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4] D PAS_chr1-1_0242 DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D PAS_chr2-2_0181 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1 D PAS_chr1-1_0245 Structural maintenance of chromosomes (SMC) protein K22803 SMC5; structural maintenance of chromosomes protein 5 D PAS_chr1-4_0535 Structural maintenance of chromosomes protein K22804 SMC6; structural maintenance of chromosomes protein 6 D PAS_chr2-1_0398 DNA repair protein Nse1 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] D PAS_chr3_0384 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] D PAS_chr2-1_0814 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4 D PAS_chr2-1_0041 hypothetical protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-] D PAS_chr2-1_0135 Helix-hairpin-helix protein, involved in DNA repair and replication fork stability K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] D PAS_chr4_0299 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 D PAS_chr1-3_0243 Subunit of a complex, with Slx4p, that hydrolyzes 5' branches from duplex DNA K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-] D PAS_chr3_0813 hypothetical protein K15079 SLX4; structure-specific endonuclease subunit SLX4 D PAS_FragB_0059 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] D PAS_chr2-1_0356 Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex K11339 MORF4L1; mortality factor 4-like protein 1 D PAS_chr4_0241 Putative ATPase of the AAA family K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-] D PAS_chr3_0200 Sumoylated protein of unknown function K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] D PAS_chr1-4_0549 ATP-dependent DNA helicase K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4] D PAS_chr2-1_0371 hypothetical protein K26122 MMS22; E3 ubiquitin-protein ligase substrate receptor MMS22 D PAS_chr3_0329 Subunit of the telomeric Ku complex (Yku70p-Yku80p) K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 D PAS_chr4_0751 Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in telomere length maintenance K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 D PAS_chr3_0732 DNA ligase required for nonhomologous end-joining (NHEJ) K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] D PAS_chr3_0797 DNA polymerase IV K10981 POL4; DNA polymerase IV [EC:2.7.7.7] D PAS_chr3_1246 hypothetical protein K15360 STRA13; centromere protein X D PAS_chr3_0147 Essential DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for K11137 TELO2; telomere length regulation protein D PAS_chr3_0158 Putative protein of unknown function K15361 WDR48; WD repeat-containing protein 48 D PAS_chr1-4_0703 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7] D PAS_chr2-1_0768 Deoxycytidyl transferase, forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] D PAS_chr2-1_0697 Catalytic subunit of DNA polymerase zeta, which is involved in DNA repair and translesion synthesis K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7] D PAS_chr4_0125 hypothetical protein K03508 POLZ2; DNA polymerase zeta [EC:2.7.7.7] D PAS_chr3_0359 Ubiquitin-conjugating enzyme (E2) K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D PAS_chr2-1_0274 Protein involved in postreplication repair K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27] D PAS_chr3_0346 DNA helicase K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-] D PAS_chr2-1_0568 Protein involved in error-free postreplication DNA repair K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant D PAS_chr2-1_0058 Ubiquitin-conjugating enzyme involved in the error-free DNA postreplication repair pathway K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] D PAS_chr3_0587 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] D PAS_chr2-1_0061 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints K06662 HRAD17; cell cycle checkpoint protein D PAS_chr3_0565 hypothetical protein K02544 MEC3; G2-specific checkpoint protein D PAS_FragB_0028 hypothetical protein K06663 DDC1; DNA damage checkpoint protein D PAS_chr2-2_0013 Subunit of a replication-pausing checkpoint complex (Tof1p-Mrc1p-Csm3p) K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 D PAS_chr4_0244 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3 D PAS_chr1-1_0329 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1 D PAS_chr1-1_0077 hypothetical protein K20403 TTI1; TELO2-interacting protein 1 D PAS_chr3_0280 hypothetical protein K23387 GET4; golgi to ER traffic protein 4 D PAS_chr1-3_0143 Protein kinase primarily involved in telomere length regulation K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D PAS_chr4_0585 Serine/threonine kinase and DNA damage checkpoint effector K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D PAS_chr2-2_0040 Cell-cycle checkpoint serine-threonine kinase K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1] D PAS_chr1-1_0273 Protein tyrosine phosphatase involved in cell cycle control K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D PAS_chr2-1_0809 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D PAS_chr3_1254 hypothetical protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D PAS_chr3_0395 hypothetical protein K06661 RAD9; DNA repair protein RAD9 D PAS_chr2-2_0297 Genome integrity checkpoint protein and PI kinase superfamily member K02543 MEC1; cell cycle checkpoint protein MEC1 D PAS_chr4_0366 Protein required for daughter cell separation, multiple mitotic checkpoints and chromosome stability K15081 AMN1; antagonist of mitotic exit network protein 1 D PAS_chr3_0624 Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D PAS_chr4_0205 Forkhead family transcription factor with a major role in the expression of G2/M phase genes K24664 FKH; forkhead protein FKH D PAS_chr2-1_0572 AAA-type ATPase that is regulated by Vta1p K12196 VPS4; vacuolar protein-sorting-associated protein 4 D PAS_chr2-1_0868 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7] D PAS_chr3_0308 Required for a post-incision step in the repair of DNA single and double-strand breaks K15340 DCLRE1A; DNA cross-link repair 1A protein D PAS_chr4_0382 Mitochondrial protein of unknown function K17815 EXO5; exonuclease V [EC:3.1.-.-] D PAS_chr4_0764 Splicing factor associated with the spliceosome K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D PAS_chr1-3_0182 Essential splicing factor K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D PAS_chr4_0670 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27 D PAS_chr4_0083 Splicing factor that is found in the Cef1p subcomplex of the spliceosome K12862 PLRG1; pleiotropic regulator 1 D PAS_chr2-1_0478 dUTPase, catalyzes hydrolysis of dUTP to dUMP and PPi K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PAS_chr1-1_0282 One of two large regulatory subunits of ribonucleotide-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PAS_chr2-1_0209 One of two large regulatory subunits of ribonucleotide-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PAS_chr4_0197 Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D PAS_chr1-3_0257 3-methyl-adenine DNA glycosylase involved in protecting DNA against alkylating agents K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PAS_chr3_0219 DNA helicase and DNA-dependent ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] C 03029 Mitochondrial biogenesis [BR:ppa03029] D PAS_chr1-4_0022 Mitochondrial RNA polymerase K10908 POLRMT; DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6] D PAS_chr2-1_0244 Mitochondrial translation initiation factor 2 K02519 infB; translation initiation factor IF-2 D PAS_chr3_0562 Mitochondrial translation elongation factor Tu K02358 tuf; elongation factor Tu D PAS_chr2-2_0409 Mitochondrial elongation factor involved in translational elongation K02355 fusA; elongation factor G D PAS_chr4_0033 Mitochondrial elongation factor involved in translational elongation K02355 fusA; elongation factor G D PAS_chr1-4_0230 hypothetical protein K21594 GUF1; translation factor GUF1, mitochondrial [EC:3.6.5.-] D PAS_chr1-4_0517 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] D PAS_chr1-4_0176 hypothetical protein K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5] D PAS_chr4_0690 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PAS_chr3_0927 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PAS_chr2-1_0295 Subunit of both RNase MRP K14526 POP7; ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5] D PAS_chr4_0566 Subunit of both RNase MRP and nuclear RNase P K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PAS_chr3_1050 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] D PAS_chr2-1_0185 Protein subunit of mitochondrial RNase P, has roles in nuclear transcription, cytoplasmic and mitoch K14533 RPM2; ribonuclease P protein component, mitochondrial [EC:3.1.26.5] D PAS_chr2-2_0221 Nuclear encoded protein required for translation of COX1 mRNA K17656 MSS51; mitochondrial splicing suppressor protein 51 D PAS_chr4_0863 hypothetical protein K17660 CBP1; cytochrome b pre-mRNA-processing protein 1 D PAS_chr2-1_0817 hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D PAS_chr3_0664 Mitochondrial translational activator of the COB mRNA K17663 CBP6; cytochrome b pre-mRNA-processing protein 6 D PAS_chr1-3_0200 hypothetical protein K17666 PET54; protein PET54, mitochondrial D PAS_chr1-4_0540 hypothetical protein K17667 PET111; protein PET111, mitochondrial D PAS_chr4_0873 Specific translational activator for the COX1 mRNA K17669 PET309; pentatricopeptide repeat-containing protein PET309 D PAS_chr1-1_0043 hypothetical protein K17672 AEP2; ATPase expression protein 2, mitochondrial D PAS_chr1-1_0167 Peripheral mitochondrial inner membrane protein, located on the matrix face of the membrane K18155 AEP3; ATPase expression protein 3, mitochondrial D PAS_chr1-1_0197 Conserved protein that may act as a chaperone in the degradation of cytochrome c oxidase subunits K18798 AFG1; peroxisome-assembly ATPase [EC:3.6.4.7] D PAS_chr3_0784 hypothetical protein K17673 ATP22; mitochondrial translation factor ATP22 D PAS_chr3_0468 Putative metalloprotease of the mitochondrial inner membrane K18156 ATP23; mitochondrial inner membrane protease ATP23 [EC:3.4.24.-] D PAS_chr2-1_0820 hypothetical protein K17674 SOV1; protein SOV1, mitochondrial D PAS_chr1-4_0191 ATP-dependent RNA helicase, component of the mitochondrial degradosome along with the RNase Dss1p K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D PAS_FragB_0057 Exoribonuclease II, mitochondrial K19782 DSS1; exoribonuclease II, mitochondrial [EC:3.1.13.1] D PAS_chr4_0210 ADP/ATP carrier protein K05863 SLC25A4S; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 D PAS_chr4_0592 Mitochondrial iron transporter of the mitochondrial carrier family (MCF) K15113 SLC25A28_37; solute carrier family 25 (mitochondrial iron transporter), member 28/37 D PAS_chr4_0522 Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAS_chr3_1110 Mitochondrial tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAS_chr4_0393 Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAS_chr1-4_0534 Mitochondrial leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAS_chr4_0101 Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAS_chr3_0376 Cytoplasmic and mitochondrial glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PAS_chr3_0166 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAS_chr2-1_0400 Putative protein similar to bacterial glutamyl-tRNA amidotransferases K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PAS_chr4_0705 Protein required for mitochondrial translation K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PAS_chr2-2_0249 Cell-wall L-asparaginase II, involved in asparagine catabolism K19828 MTG1; mitochondrial GTPase 1 D PAS_chr2-1_0443 hypothetical protein K23498 COXPD7; peptide chain release factor D PAS_chr3_0804 Putative protein of unknown function K23499 RMND1; required for meiotic nuclear division protein 1 D PAS_chr2-2_0093 Putative protein of unknown function K25877 MYG1; MYG1 exonuclease [EC:3.1.-.-] D PAS_chr3_0703 DNA polymerase gamma K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7] D PAS_chr2-1_0653 Mitochondrial cruciform cutting endonuclease K17676 CCE1; cruciform cutting endonuclease 1 [EC:3.1.21.10] D PAS_chr4_0864 Major mitochondrial nuclease, has RNAse and DNA endo-and exonucleolytic activities K01173 ENDOG; endonuclease G, mitochondrial D PAS_chr3_0309 Putative protein of unknown function K17677 IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-] D PAS_chr1-4_0209 Mitochondrial ATP-dependent RNA helicase of the DEAD-box family K17678 MRH4; ATP-dependent RNA helicase MRH4, mitochondrial [EC:5.6.2.7] D PAS_chr4_0250 DEAD-box protein required for efficient splicing of mitochondrial Group I and II introns K17679 MSS116; ATP-dependent RNA helicase MSS116, mitochondrial [EC:5.6.2.7] D PAS_chr2-1_0228 DNA helicase involved in rDNA replication and Ty1 transposition K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D PAS_chr2-1_0439 DNA helicase involved in telomere formation and elongation K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D PAS_chr1-4_0175 Mitochondrial inner membrane localized ATP-dependent DNA helicase K19781 HMI1; ATP-dependent DNA helicase HMI1, mitochondrial [EC:5.6.2.4] D PAS_chr4_0557 Mitochondrial outer membrane protein, component of the Mdm10-Mdm12-Mmm1 complex K17764 MMM1; maintenance of mitochondrial morphology protein 1 D PAS_chr3_0263 Mitochondrial outer membrane protein K17765 MDM12; mitochondrial distribution and morphology protein 12 D PAS_chr2-2_0066 Protein chaperone involved in regulation of the HSP90 and HSP70 functions K09503 DNAJA2; DnaJ homolog subfamily A member 2 D PAS_chr3_0480 Putative chaperone, homolog of E. coli DnaJ, closely related to Ydj1p K09503 DNAJA2; DnaJ homolog subfamily A member 2 D PAS_chr3_0698 Evolutionarily-conserved tail-anchored outer mitochondrial membrane GTPase K07870 RHOT1; mitochondrial Rho GTPase 1 [EC:3.6.5.-] D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0391 Component of the TOM (translocase of outer membrane) complex K11518 TOM40; mitochondrial import receptor subunit TOM40 D PAS_chr2-2_0370 Component (70 kDa) of the TOM (translocase of outer membrane) complex K17768 TOM70; mitochondrial import receptor subunit TOM70 D PAS_chr2-2_0356 hypothetical protein K17769 TOM22; mitochondrial import receptor subunit TOM22 D PAS_chr3_0584 Component of the TOM (translocase of outer membrane) complex K17770 TOM20; mitochondrial import receptor subunit TOM20 D PAS_chr3_1190 hypothetical protein K17771 TOM7; mitochondrial import receptor subunit TOM7 D PAS_chr1-3_0076 hypothetical protein K17772 TOM6; mitochondrial import receptor subunit TOM6 D PAS_chr4_0350 hypothetical protein K17773 TOM5; mitochondrial import receptor subunit TOM5 D PAS_chr2-2_0205 Essential component of the Sorting and Assembly Machinery of the mitochondrial outer membrane K07277 SAM50; outer membrane protein insertion porin family D PAS_chr1-4_0648 Sorting and Assembly Machinery complex K07277 SAM50; outer membrane protein insertion porin family D PAS_chr1-1_0138 Component of the mitochondrial outer membrane sorting and assembly machinery (SAM) complex K17714 SAM37; sorting and assembly machinery component 37 D PAS_chr4_0936 hypothetical protein K17715 SAM35; sorting and assembly machinery component 35 D PAS_chr2-2_0392 Mitochondrial porin (voltage-dependent anion channel), outer membrane protein K15040 VDAC2; voltage-dependent anion channel protein 2 D PAS_chr1-1_0247 Subunit of both the Mdm10-Mdm12-Mmm1 complex and the mitochondrial sorting and assembly machinery K17774 MDM10; mitochondrial distribution and morphology protein 10 D PAS_chr1-4_0499 hypothetical protein K17775 MDM34; mitochondrial distribution and morphology protein 34 D PAS_chr3_0382 Mitochondrial intermembrane space protein K17777 TIM9; mitochondrial import inner membrane translocase subunit TIM9 D PAS_chr2-2_0291 Essential protein of the mitochondrial intermembrane space, forms a complex with Tim9p K17778 TIM10; mitochondrial import inner membrane translocase subunit TIM10 D PAS_chr4_0561 Mitochondrial intermembrane space protein, forms a complex with TIm8p K17781 TIM13; mitochondrial import inner membrane translocase subunit TIM13 D PAS_chr2-1_0670 Essential protein of the mitochondrial intermembrane space (IMS) K17782 MIA40; mitochondrial intermembrane space import and assembly protein 40 D PAS_chr2-1_0150 Flavin-linked sulfhydryl oxidase of the mitochondrial intermembrane space (IMS), oxidizes Mia40p as K17783 ERV1; mitochondrial FAD-linked sulfhydryl oxidase [EC:1.8.3.2] D PAS_chr1-1_0330 hypothetical protein K17784 MICOS10; MICOS complex subunit MIC10 D PAS_chr1-4_0172 hypothetical protein K17785 IMMT; MICOS complex subunit MIC60 D PAS_chr1-4_0694 hypothetical protein K17787 MIC12; MICOS complex subunit MIC12 D PAS_chr2-1_0461 Putative protein of unknown function K17786 MIC26; MICOS complex subunit MIC26 D PAS_chr2-2_0348 hypothetical protein K17786 MIC26; MICOS complex subunit MIC26 D PAS_chr1-4_0676 hypothetical protein K17790 TIM22; mitochondrial import inner membrane translocase subunit TIM22 D PAS_chr1-1_0032 Component of the mitochondrial Tim54p-Tim22p complex K17792 TIM54; mitochondrial import inner membrane translocase subunit TIM54 D PAS_chr1-1_0074 Essential protein of the inner mitochondrial membrane, peripherally localized K17793 TIM12; mitochondrial import inner membrane translocase subunit TIM12 D PAS_chr1-4_0248 Essential protein of the mitochondrial inner membrane, component of the mitochondrial import system K17794 TIM23; mitochondrial import inner membrane translocase subunit TIM23 D PAS_chr2-2_0102 Essential constituent of the mitochondrial inner membrane presequence translocase K17795 TIM17; mitochondrial import inner membrane translocase subunit TIM17 D PAS_chr3_0307 Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex) K17796 TIM21; mitochondrial import inner membrane translocase subunit TIM21 D PAS_chr2-2_0081 Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex) K17496 TIM50; mitochondrial import inner membrane translocase subunit TIM50 D PAS_chr4_0612 Peripherally bound inner membrane protein of the mitochondrial matrix K17798 MSS2; mitochondrial protein MSS2 D PAS_chr3_1195 hypothetical protein K17799 PNT1; pentamidine resistance factor, mitochondrial D PAS_chr4_0998 hypothetical protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial D PAS_chr2-1_0480 Mitochondrial inner membrane protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial D PAS_chr1-3_0217 Protein involved in assembly of mitochondrial respiratory complexes K17801 MBA1; mitochondrial protein MBA1 D PAS_chr1-3_0247 Catalytic subunit of the mitochondrial inner membrane peptidase complex K09647 IMP1; mitochondrial inner membrane protease subunit 1 [EC:3.4.21.-] D PAS_chr1-1_0274 Catalytic subunit of the mitochondrial inner membrane peptidase complex K09648 IMP2; mitochondrial inner membrane protease subunit 2 [EC:3.4.21.-] D PAS_chr2-1_0569 hypothetical protein K17802 SOM1; mitochondrial inner membrane protease subunit SOM1 D PAS_chr4_0653 Protein integral to the mitochondrial membrane K17803 OMS1; methyltransferase OMS1, mitochondrial [EC:2.1.1.-] D PAS_FragB_0029 hypothetical protein K22138 MPC1; mitochondrial pyruvate carrier 1 D PAS_chr3_1081 Putative protein of unknown function K22139 MPC2; mitochondrial pyruvate carrier 2 D PAS_chr3_0537 Peripheral mitochondrial membrane protein involved in mitochondrial protein import K17804 TIM44; mitochondrial import inner membrane translocase subunit TIM44 D PAS_chr3_0365 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr3_0402 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr1-4_0272 GrpE protein homolog, mitochondrial K03687 GRPE; molecular chaperone GrpE D PAS_chr2-2_0413 J-protein co-chaperone of the mitochondrial import motor K09539 DNAJC19; DnaJ homolog subfamily C member 19 D PAS_chr2-1_0691 Constituent of the mitochondrial import motor associated with the presequence translocase K09539 DNAJC19; DnaJ homolog subfamily C member 19 D PAS_chr1-3_0038 Constituent of the mitochondrial import motor associated with the presequence translocase K17805 PAM16; mitochondrial import inner membrane translocase subunit TIM16 D PAS_chr2-2_0126 Presequence translocase-associated motor subunit K17806 PAM17; mitochondrial import inner membrane translocase subunit TIM23 D PAS_chr3_1223 hypothetical protein K01412 PMPCA; mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64] D PAS_chr3_0855 Smaller subunit of the mitochondrial processing protease (MPP) K17732 PMPCB; mitochondrial-processing peptidase subunit beta [EC:3.4.24.64] D PAS_chr2-1_0435 Mitochondrial intermediate peptidase K01410 MIPEP; mitochondrial intermediate peptidase [EC:3.4.24.59] D PAS_chr4_0158 Tetradecameric mitochondrial chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAS_chr1-4_0163 hypothetical protein K04078 groES; chaperonin GroES D PAS_chr2-2_0323 Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p K03686 dnaJ; molecular chaperone DnaJ D PAS_chr1-4_0202 Mitochondrial protein involved in protein import into the mitochondrial matrix K17807 TAM41; mitochondrial translocator assembly and maintenance protein 41 D PAS_chr4_0438 Heat shock protein with a zinc finger motif K17808 ZIM17; mitochondrial protein import protein ZIM17 D PAS_chr3_0037 Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAS_chr2-1_0143 Conserved protein of the mitochondrial matrix, performs a scaffolding function during assembly of ir K22068 ISCU; iron-sulfur cluster assembly enzyme ISCU, mitochondrial D PAS_chr1-4_0025 Frataxin, regulates mitochondrial iron accumulation K19054 FXN; frataxin [EC:1.16.3.1] D PAS_FragB_0042 Adrenodoxin homolog, mitochondrial K22071 FDX2; ferredoxin-2, mitochondrial D PAS_chr3_0058 Oxidoreductase of the mitochondrial inner membrane, involved in cytoplasmic and mitochondrial iron H K18914 FDXR; adrenodoxin-NADP+ reductase [EC:1.18.1.6] D PAS_chr4_0353 Specialized J-protein that functions with Hsp70 in Fe-S cluster biogenesis in mitochondria K04082 hscB; molecular chaperone HscB D PAS_chr1-1_0237 Nucleotide exchange factor for the endoplasmic reticulum (ER) lumenal Hsp70 chaperone Kar2p K14001 SIL1; nucleotide exchange factor SIL1 D PAS_chr1-4_0207 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase K07390 grxD; monothiol glutaredoxin D PAS_chr1-1_0110 Mitochondrial matrix protein involved in biogenesis of iron-sulfur (Fe/S) cluster of Fe/S proteins K22063 ISCA1; iron-sulfur cluster assembly 1 D PAS_chr2-1_0258 Protein required for maturation of mitochondrial and cytosolic Fe/S proteins, localizes to the mitoc K22072 ISCA2; iron-sulfur cluster assembly 2 D PAS_chr2-2_0122 Mitochondrial matrix protein K22073 IBA57; transferase CAF17, mitochondrial [EC:2.1.-.-] D PAS_chr1-4_0109 Protein involved in iron metabolism in mitochondria K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial D PAS_chr1-4_0284 Protein involved in iron metabolism in mitochondria K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial D PAS_FragB_0010 hypothetical protein K22066 BOLA1; BolA-like protein 1 D PAS_chr3_0702 Putative protein of unknown function K22075 BOLA3; BolA-like protein 3 D PAS_chr1-3_0186 Putative protein, predicted to be an alpha-isopropylmalate carrier K23503 SFXN5; sideroflexin-5 D PAS_chr4_0441 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria K08675 PRSS15; ATP-dependent Lon protease [EC:3.4.21.53] D PAS_chr4_0501 Protein involved in regulation of mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) K18158 NCA2; nuclear control of ATPase protein 2 D PAS_chr3_0114 hypothetical protein K18159 NDUFAF1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1 D PAS_chr2-1_0131 hypothetical protein K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 D PAS_chr1-4_0170 hypothetical protein K09008 NDUFAF3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 D PAS_chr3_0319 hypothetical protein K18162 NDUFAF5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 [EC:2.1.1.-] D PAS_chr3_0379 hypothetical protein K18163 NDUFAF6; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6 D PAS_chr2-2_0233 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 D PAS_chr1-4_0564 Iron-sulfur protein IND1 K03593 mrp; ATP-binding protein involved in chromosome partitioning D PAS_chr1-3_0158 hypothetical protein identified by homology K18167 SDHAF1; succinate dehydrogenase assembly factor 1 D PAS_chr2-1_0323 Essential Hsp90p co-chaperone K18168 SDHAF2; succinate dehydrogenase assembly factor 2 D PAS_chr3_0116 Protein of the mitochondrial inner membrane that functions as an ATP-dependent chaperone, required F K08900 BCS1; mitochondrial chaperone BCS1 D PAS_chr4_0944 hypothetical protein K18170 LYRM7; complex III assembly factor LYRM7 D PAS_chr1-4_0482 Evolutionarily conserved copper-binding protein of the mitochondrial inner membrane K18171 CMC1; COX assembly mitochondrial protein 1 D PAS_chr2-2_0456 hypothetical protein K18172 CMC2; COX assembly mitochondrial protein 2 D PAS_chr4_0744 Mitochondrial inner membrane protein required for assembly of the cytochrome c oxidase complex K18173 COA1; cytochrome c oxidase assembly factor 1 D PAS_chr3_0328 hypothetical protein K18174 COA2; cytochrome c oxidase assembly factor 2 D PAS_chr2-1_0565 Putative protein of unknown function, identified based on comparison to related yeast species K18176 COA3; cytochrome c oxidase assembly factor 3, fungi type D PAS_chr2-1_0344 Protein required for assembly of cytochrome c oxidase K18178 COA5; cytochrome c oxidase assembly factor 5 D PAS_chr1-4_0018 hypothetical protein K18179 COA6; cytochrome c oxidase assembly factor 6 D PAS_chr1-3_0194 Heme A:farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D PAS_chr2-1_0226 Mitochondrial inner membrane protein required for delivery of copper to the Cox1p subunit of cytochr K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D PAS_chr4_0838 hypothetical protein K18181 COX14; cytochrome c oxidase assembly factor 14 D PAS_chr4_0449 Protein required for the hydroxylation of heme O to form heme A K02259 COX15; heme a synthase [EC:1.17.99.9] D PAS_chr3_0745 Cytochrome c oxidase assembly protein/Cu2+ chaperone K02260 COX17; cytochrome c oxidase assembly protein subunit 17 D PAS_chr2-1_0349 Mitochondrial integral inner membrane protein required for membrane insertion of C-terminus of Cox2p K17797 COX18; mitochondrial inner membrane protein COX18 D PAS_chr3_0428 Protein required for cytochrome c oxidase assembly K18183 COX19; cytochrome c oxidase assembly protein subunit 19 D PAS_chr2-2_0344 Mitochondrial inner membrane protein K18184 COX20; cytochrome c oxidase assembly protein subunit 20 D PAS_chr2-2_0372 Mitochondrial intermembrane space protein that functions in mitochondrial copper homeostasis K18185 COX23; cytochrome c oxidase assembly protein subunit 23 D PAS_chr2-2_0092 Chaperone that specifically facilitates the assembly of cytochrome c oxidase K18187 PET100F; protein PET100, fungi type D PAS_chr1-4_0237 hypothetical protein K18188 PET117; protein PET117 D PAS_chr1-4_0577 Mitochondrial inner membrane insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAS_chr1-1_0421 Mitochondrial inner membrane protein required for assembly of cytochrome c oxidase (complex IV) K14998 SURF1; surfeit locus 1 family protein D PAS_chr4_0227 Copper-binding protein of the mitochondrial inner membrane K07152 SCO1; protein SCO1 D PAS_chr1-3_0137 Molecular chaperone K07555 ATPeAF1; ATP synthase mitochondrial F1 complex assembly factor 1 D PAS_chr2-2_0119 Conserved protein required for assembly of subunits of mitochondrial F1F0 ATP synthase K07556 ATPeAF2; ATP synthase mitochondrial F1 complex assembly factor 2 D PAS_chr4_0804 hypothetical protein K18191 FMC1; ATP synthase assembly factor FMC1, mitochondrial D PAS_chr2-1_0708 Mitochondrial inner membrane protein K18192 ATP10; mitochondrial ATPase complex subunit ATP10 D PAS_chr2-1_0285 Mitochondrial integral membrane protein involved in mitochondrial fusion and maintenanceof the mitoc K06030 MFN2; mitofusin 2 [EC:3.6.5.-] D PAS_chr2-1_0207 Mitochondrial GTPase related to dynamin, present in a complex containing Ugo1p and Fzo1p K22140 MGM1; dynamin-like GTPase MGM1, mitochondrial D PAS_chr3_0878 hypothetical protein K17967 UGO1; mitochondrial fusion and transport protein UGO1 D PAS_chr4_0155 hypothetical protein K23166 OPA3; optic atrophy 3 protein D PAS_chr3_0056 Mitochondrial intermembrane space cysteine motif protein K17968 TRIAP1; TRIAP1/MDM35 family protein D PAS_chr4_0714 Mitochondrial serine protease K09650 PARL; rhomboid-like protein [EC:3.4.21.105] D PAS_chr3_0751 Dynamin-related GTPase K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5] D PAS_chr2-1_0169 Mitochondrial outer membrane protein involved in membrane fission, required for localization of Dnm1 K17969 FIS1; mitochondrial fission 1 protein D PAS_chr2-1_0080 Peripheral protein of the cytosolic face of the mitochondrial outer membrane, required for mitochond K17970 MDV1; mitochondrial division protein 1 D PAS_chr4_0636 Formin, nucleates the formation of linear actin filaments K11238 BNI1; cytokinesis protein D PAS_FragB_0058 hypothetical protein K17971 BNR1; BNI1-related protein 1 D PAS_chr4_0115 Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments K17945 TPM1_2; tropomyosin, fungi type D PAS_chr4_0346 Catalytic subunit of the NatB N-terminal acetyltransferase K17972 NAA20; N-terminal acetyltransferase B complex catalytic subunit [EC:2.3.1.254] D PAS_chr3_1205 hypothetical protein K17973 NAA25; N-terminal acetyltransferase B complex non-catalytic subunit D PAS_chr2-1_0535 Protein of the mitochondrial outer surface K17944 PUF3; mRNA-binding protein PUF3 D PAS_chr4_0505 Subunit of the prohibitin complex (Phb1p-Phb2p) K17080 PHB1; prohibitin 1 D PAS_chr1-4_0683 hypothetical protein K17081 PHB2; prohibitin 2 D PAS_FragB_0012 Myosin-2 K10357 MYO5; myosin V D PAS_chr3_0532 Intermediate filament protein K17887 SNX25; sorting nexin-25 D PAS_chr2-1_0675 Mitochondrial inner membrane protein with similarity to Mdm32p K17979 MDM31; mitochondrial distribution and morphology protein 31 D PAS_chr4_0908 Mitochondrial distribution and morphology protein K17980 MDM32; mitochondrial distribution and morphology protein 32 D PAS_chr2-1_0338 hypothetical protein K17981 MTFP1; mitochondrial fission process protein 1 D PAS_chr2-1_0217 Mitochondrial ribosomal protein of the small subunit, has similarity to mammalian apoptosis mediator K17408 DAP3; small subunit ribosomal protein S29 D PAS_chr2-1_0354 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26] D PAS_chr1-3_0175 Essential protein involved in mtDNA inheritance K27320 MSTO1; protein misato D PAS_chr3_0880 Mitochondrial inner membrane protein required for normal mitochondrial morphology K17983 SHE9; sensitive to high expression protein 9, mitochondrial D PAS_chr1-3_0168 Peripheral membrane protein required for vesicle formation K17906 ATG2; autophagy-related protein 2 D PAS_chr3_0688 E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3 D PAS_chr1-4_0522 Conserved cysteine protease required for autophagy K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-] D PAS_chr4_0459 Conserved protein involved in autophagy and the Cvt pathway K08339 ATG5; autophagy-related protein 5 D PAS_chr2-1_0211 Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II K08334 BECN; beclin D PAS_chr1-4_0310 Autophagy-related protein K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7 D PAS_chr4_0704 Conserved protein that is a component of autophagosomes and Cvt vesicles K08341 GABARAP; GABA(A) receptor-associated protein D PAS_chr4_0510 Transmembrane protein involved in formation of Cvt and autophagic vesicles K17907 ATG9; autophagy-related protein 9 D PAS_chr1-4_0555 Adapter protein for pexophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway K08330 ATG11; autophagy-related protein 11 D PAS_chr3_0363 Conserved ubiquitin-like modifier K08336 ATG12; ubiquitin-like protein ATG12 D PAS_chr1-1_0465 hypothetical protein K17900 ATG15; lipase ATG15 [EC:3.1.1.3] D PAS_chr2-1_0672 Scaffold protein responsible for pre-autophagosomal structure organization K08329 ATG17; autophagy-related protein 17 D PAS_chr3_0931 Phosphoinositide binding protein required for vesicle formation in autophagy K17908 WIPI1_2; autophagy-related protein 18 D PAS_chr3_1016 Phosphoinositide binding protein K17908 WIPI1_2; autophagy-related protein 18 D PAS_chr1-4_0101 Phosphorylated vacuolar membrane protein that interacts with Atg13p K08332 VAC8; vacuolar protein 8 D PAS_chr2-2_0432 Regulatory subunit of the Atg1p signaling complex K08331 ATG13; autophagy-related protein 13 D PAS_chr2-1_0641 Protein serine/threonine kinase required for vesicle formation in autophagy K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1] D PAS_chr1-4_0130 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D PAS_chr2-1_0828 hypothetical protein K09554 CDC37; cell division cycle protein 37 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ppa02000] D PAS_chr2-1_0613 Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter K05657 ABCB10; ATP-binding cassette, subfamily B (MDR/TAP), member 10 D PAS_chr2-1_0050 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of A-factor, catalyze K05658 ABCB1; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] D PAS_chr3_0858 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of A-factor K05658 ABCB1; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] D PAS_chr4_0473 Mitochondrial inner membrane ATP-binding cassette (ABC) transporter K05662 ABCB7; ATP-binding cassette, subfamily B (MDR/TAP), member 7 D PAS_chr1-4_0619 Metal resistance protein YCF1 K05665 ABCC1; ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] D PAS_chr1-4_0562 Bile pigment transporter K05665 ABCC1; ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] D PAS_chr4_0188 Plasma membrane ATP-binding cassette (ABC) transporter K05665 ABCC1; ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] D PAS_chr4_0186 Plasma membrane ATP-binding cassette (ABC) transporter K05665 ABCC1; ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] D PAS_chr3_0822 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) K15628 PXA; ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein [EC:7.6.2.4] D PAS_chr2-2_0272 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) K15628 PXA; ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein [EC:7.6.2.4] D PAS_chr3_0935 Putative ATP-dependent permease of the ABC transporter family of proteins K05681 ABCG2; ATP-binding cassette, subfamily G (WHITE), member 2 D PAS_chr1-1_0398 Plasma membrane ATP binding cassette (ABC) transporter K08711 PDR; ATP-binding cassette, subfamily G (WHITE), member 2, PDR D PAS_chr2-2_0299 Plasma membrane ATP binding cassette (ABC) transporter K08711 PDR; ATP-binding cassette, subfamily G (WHITE), member 2, PDR D PAS_chr4_0832 Plasma membrane ATP-binding cassette (ABC) transporter K08712 SNQ2; ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 D PAS_chr2-1_0280 Plasma membrane ATP-binding cassette (ABC) transporter, multidrug transporter involved in multidrug K08712 SNQ2; ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 D PAS_chr4_0859 Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter K02021 ABC.MR; putative ABC transport system ATP-binding protein D PAS_chr2-1_0489 Myo-inositol transporter with strong similarity to the major myo-inositol transporter Itr1p K08150 SLC2A13; MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13 D PAS_chr2-1_0851 hypothetical protein K08150 SLC2A13; MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13 D PAS_chr2-1_0156 Endosomal Na+/H+ exchanger, required for intracellular sequestration of Na+ K12041 SLC9A6_7; solute carrier family 9 (sodium/hydrogen exchanger), member 6/7 D PAS_chr2-1_0719 Putative transporter, member of the SLC10 carrier family K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PAS_chr3_0643 Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1-cotransporter family K14429 SLC12A9; solute carrier family 12 (potassium/chloride transporters), member 9 D PAS_chr2-1_0235 Na+/Pi cotransporter, active in early growth phase K14640 SLC20A; solute carrier family 20 (sodium-dependent phosphate transporter) D PAS_chr3_1164 hypothetical protein K13754 SLC24A6; solute carrier family 24 (sodium/potassium/calcium exchanger), member 6 D PAS_chr4_0802 Putative protein of unknown function K13754 SLC24A6; solute carrier family 24 (sodium/potassium/calcium exchanger), member 6 D PAS_chr3_0177 Mitochondrial inner membrane citrate transporter K15100 SLC25A1; solute carrier family 25 (mitochondrial citrate transporter), member 1 D PAS_chr4_0688 Mitochondrial succinate-fumarate transporter K15100 SLC25A1; solute carrier family 25 (mitochondrial citrate transporter), member 1 D PAS_chr3_0769 Putative mitochondrial transport protein K15100 SLC25A1; solute carrier family 25 (mitochondrial citrate transporter), member 1 D PAS_chr4_0488 Mitochondrial phosphate carrier, imports inorganic phosphate into mitochondria K15102 SLC25A3; solute carrier family 25 (mitochondrial phosphate transporter), member 3 D PAS_chr1-4_0615 mitochondrial phosphate carrier protein K15102 SLC25A3; solute carrier family 25 (mitochondrial phosphate transporter), member 3 D PAS_chr4_0210 ADP/ATP carrier protein K05863 SLC25A4S; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 D PAS_chr4_0877 Mitochondrial dicarboxylate carrier, integral membrane protein K13577 SLC25A10; solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10 D PAS_chr3_0434 Mitochondrial amino acid transporter K15105 SLC25A12_13; solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13 D PAS_chr1-3_0250 Mitochondrial carrier protein involved in the accumulation of CoA in the mitochondrial matrix K15084 SLC25A16; solute carrier family 25 (mitochondrial carrier protein), member 16 D PAS_chr3_0099 Mitochondrial NAD+ transporter, involved in the transport of NAD+ into the mitochondria (see also YE K13354 SLC25A17; solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17 D PAS_chr3_0756 Mitochondrial membrane transporter K15108 SLC25A19; solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19 D PAS_chr2-2_0355 Mitochondrial inner membrane carnitine transporter K15109 SLC25A20_29; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 D PAS_chr1-1_0401 Mitochondrial protein, putative inner membrane transporter K15109 SLC25A20_29; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 D PAS_chr1-4_0420 Mitochondrial protein, putative inner membrane transporter K15109 SLC25A20_29; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 D PAS_chr4_0049 Mitochondrial protein, putative inner membrane transporter K15109 SLC25A20_29; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 D PAS_chr2-1_0854 hypothetical protein K15109 SLC25A20_29; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 D PAS_chr3_0040 Mitochondrial inner membrane transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochond K15110 SLC25A21; solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21 D PAS_chr4_0122 Probable transporter, member of the Ca2+-binding subfamily of the mitochondrial carrier family K14684 SLC25A23S; solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41 D PAS_chr4_0671 Putative transporter, member of the mitochondrial carrier family K14684 SLC25A23S; solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41 D PAS_chr3_0036 S-adenosylmethionine transporter of the mitochondrial inner membrane, member of the mitochondrial ca K15111 SLC25A26; solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26 D PAS_chr4_0592 Mitochondrial iron transporter of the mitochondrial carrier family (MCF) K15113 SLC25A28_37; solute carrier family 25 (mitochondrial iron transporter), member 28/37 D PAS_chr2-1_0419 Mitochondrial NAD+ transporter, involved in the transport of NAD+ into the mitochondria K15115 SLC25A32; solute carrier family 25 (mitochondrial folate transporter), member 32 D PAS_chr3_0429 Protein required for transport of flavin adenine dinucleotide (FAD) K15115 SLC25A32; solute carrier family 25 (mitochondrial folate transporter), member 32 D PAS_chr1-4_0423 Mitochondrial pyrimidine nucleotide transporter K15116 SLC25A33_36; solute carrier family 25, member 33/36 D PAS_chr1-1_0081 Mitochondrial inner membrane transporter, transports oxaloacetate, sulfate, and thiosulfate K15117 SLC25A34_35; solute carrier family 25, member 34/35 D PAS_chr4_0792 Putative mitochondrial transport protein K15118 SLC25A38; solute carrier family 25, member 38 D PAS_chr2-1_0462 Mitochondrial protein of the mitochondrial carrier family K15119 SLC25A39_40; solute carrier family 25, member 39/40 D PAS_chr3_0100 Ornithine transporter of the mitochondrial inner membrane, exports ornithine from mitochondria as pa K15114 ORT1; mitochondrial ornithine carrier protein D PAS_chr3_0489 High affinity sulfate permease K14708 SLC26A11; solute carrier family 26 (sodium-independent sulfate anion transporter), member 11 D PAS_chr2-1_0257 Nucleoside transporter with broad nucleoside selectivity K15014 SLC29A1_2_3; solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3 D PAS_chr4_0896 Zinc/cadmium resistance protein K14688 SLC30A1; solute carrier family 30 (zinc transporter), member 1 D PAS_chr4_0967 hypothetical protein K14692 SLC30A5_7; solute carrier family 30 (zinc transporter), member 5/7 D PAS_chr2-1_0889 hypothetical protein K14686 SLC31A1; solute carrier family 31 (copper transporter), member 1 D PAS_chr4_0181 High-affinity copper transporter of the plasma membrane K14686 SLC31A1; solute carrier family 31 (copper transporter), member 1 D PAS_chr3_0226 Vacuolar transporter K15015 SLC32A; solute carrier family 32 (vesicular inhibitory amino acid transporter) D PAS_chr2-2_0028 Putative protein, acetyl coenzyme A transporter K03372 SLC33A1; MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1 [EC:2.3.1.-] D PAS_chr2-1_0692 Protein with a role in UDP-galactose transport to the Golgi lumen K15275 SLC35B1; solute carrier family 35 (UDP-galactose transporter), member B1 D PAS_chr1-3_0163 Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter K15278 SLC35B4; solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 D PAS_chr3_0392 Putative nucleotide sugar transporter K15280 SLC35C2; solute carrier family 35, member C2 D PAS_chr2-1_0457 Protein involved in ER-to-Golgi transport K15283 SLC35E1; solute carrier family 35, member E1 D PAS_chr3_1143 Putative protein of unknown function K15289 SLC35F5; solute carrier family 35, member F5 D PAS_chr3_0295 Vacuolar transporter K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter) D PAS_chr2-2_0343 Vacuolar transporter, exports large neutral amino acids from the vacuole K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter) D PAS_chr4_0318 Putative transporter, member of a family of seven S. cerevisiae genes (AVT1-7) K14997 SLC38A11; solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11 D PAS_chr3_0516 High-affinity zinc transporter of the plasma membrane K14709 SLC39A1_2_3; solute carrier family 39 (zinc transporter), member 1/2/3 D PAS_chr4_0516 Low-affinity zinc transporter of the plasma membrane K14709 SLC39A1_2_3; solute carrier family 39 (zinc transporter), member 1/2/3 D PAS_chr3_0543 Zinc transporter K14713 SLC39A7; solute carrier family 39 (zinc transporter), member 7 D PAS_chr4_0749 Golgi membrane protein involved in manganese homeostasis K14715 SLC39A9; solute carrier family 39 (zinc transporter), member 9 D PAS_chr2-2_0406 hypothetical protein K15378 SLC45A1_2_4; solute carrier family 45, member 1/2/4 D PAS_FragB_0050 Uncharacterized transporter K03327 SLC47A; MATE family, multidrug and toxin extrusion protein D PAS_chr4_0306 hypothetical protein K03327 SLC47A; MATE family, multidrug and toxin extrusion protein D PAS_FragB_0029 hypothetical protein K22138 MPC1; mitochondrial pyruvate carrier 1 D PAS_chr3_1081 Putative protein of unknown function K22139 MPC2; mitochondrial pyruvate carrier 2 D PAS_chr1-3_0186 Putative protein, predicted to be an alpha-isopropylmalate carrier K23503 SFXN5; sideroflexin-5 D PAS_chr2-1_0742 hypothetical protein K22733 NIPA; magnesium transporter D PAS_chr2-2_0176 hypothetical protein K22733 NIPA; magnesium transporter D PAS_chr4_0610 Gamma subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-l K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6 D PAS_chr3_1142 Subunit of the oligosaccharyltransferase complex of the ER lumen K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6 D PAS_chr1-1_0168 Vacuolar membrane protein that transits through the biosynthetic vacuolar protein sorting pathway K12385 NPC1; Niemann-Pick C1 protein D PAS_chr4_0372 Putative protein of unknown function K23678 PQLC2; solute carrier family 66 (lysosomal lysine-arginine transporter), member 1 D PAS_chr1-1_0231 hypothetical protein K23678 PQLC2; solute carrier family 66 (lysosomal lysine-arginine transporter), member 1 D PAS_chr4_0092 Putative protein of unknown function K23678 PQLC2; solute carrier family 66 (lysosomal lysine-arginine transporter), member 1 D PAS_chr1-3_0164 hypothetical protein K23679 PQLC1; solute carrier family 66, member 2 D PAS_chr1-4_0570 High-affinity glucose transporter of the major facilitator superfamily K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D PAS_chr1-1_0300 Plasma membrane glucose sensor that regulates glucose transport K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D PAS_chr2-1_0054 Putative hexose transporter, expressed at low levels and expression is repressed by glucose K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D PAS_chr4_0011 Maltose permease, high-affinity maltose transporter (alpha-glucoside transporter) K08141 MAL; MFS transporter, SP family, general alpha glucoside:H+ symporter D PAS_chr3_0440 Lactate transporter K08178 JEN; MFS transporter, SHS family, lactate transporter D PAS_chr3_0266 Putative protein with similarity to the allantoate permease (Dal5p) K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr1-1_0287 Allantoin permease K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr1-1_0284 Putative plasma membrane permease proposed to be involved in carboxylic acid uptake K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr4_0911 hypothetical protein K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr2-2_0047 Putative protein with similarity to the allantoate permease (Dal5p) subfamily K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr1-1_0354 Allantoin permease K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr3_0028 Putative protein with similarity to the allantoate permease (Dal5p) subfamily of the major facilitat K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr1-4_0613 Probable transporter SEO1 K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr1-3_0017 cysteine transporter K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr1-1_0003 Probable transporter K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr1-4_0621 Major facilitator superfamily K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr1-4_0636 Major facilitator superfamily K08192 DAL5; MFS transporter, ACS family, DAL5 transporter family protein D PAS_chr4_0337 High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter D PAS_chr3_0141 High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter D PAS_chr3_0662 Ferrioxamine B transporter K08197 ARN; MFS transporter, SIT family, siderophore-iron:H+ symporter D PAS_chr1-4_0431 Plasma membrane multidrug transporter of the major facilitator superfamily K08158 MDR1; MFS transporter, DHA1 family, multidrug resistance protein D PAS_chr1-4_0194 Polyamine transporter that recognizes spermine, putrescine, and spermidine K08157 TPO1; MFS transporter, DHA1 family, multidrug resistance protein D PAS_chr1-1_0353 Vacuolar integral membrane protein K06902 UMF1; MFS transporter, UMF1 family D PAS_chr3_0763 Spore-specific water channel that mediates the transport of water across cell membranes K09885 AQPF; aquaporin rerated protein, other eukaryote D PAS_chr4_0784 Putative channel-like protein K03441 GLP-F; aquaglyceroporin related protein, other eukaryote D PAS_chr2-1_0301 Voltage-gated high-affinity calcium channel K21864 CCH1; voltage-dependent calcium channel D PAS_chr1-4_0394 Ammonium permease involved in regulation of pseudohyphal growth K03320 amt; ammonium transporter, Amt family D PAS_chr2-2_0391 Ammonium permease K03320 amt; ammonium transporter, Amt family D PAS_chr1-4_0552 Ammonium permease K03320 amt; ammonium transporter, Amt family D PAS_chr2-2_0116 ER associated glutathione S-transferase capable of homodimerization K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAS_chr2-1_0490 Nitrogen catabolite repression transcriptional regulator K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAS_chr2-1_0033 Nitrogen catabolite repression transcriptional regulator that acts by inhibition of GLN3 transcripti K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAS_chr1-3_0027 hypothetical protein K21989 TMEM63; calcium permeable stress-gated cation channel D PAS_chr3_1026 Putative protein of unknown function, may be involved in detoxification K21989 TMEM63; calcium permeable stress-gated cation channel D PAS_chr4_0560 Meiosis-specific protein of unknown function, required for spore wall formation during sporulation K21989 TMEM63; calcium permeable stress-gated cation channel D PAS_chr4_0482 Putative protein of unknown function, may be involved in detoxification K21989 TMEM63; calcium permeable stress-gated cation channel D PAS_chr1-3_0069 hypothetical protein K21989 TMEM63; calcium permeable stress-gated cation channel D PAS_chr1-4_0096 Plasma membrane Mg(2+) transporter, expression and turnover are regulated by Mg(2+) concentration K16073 ALR; magnesium transporter D PAS_chr2-2_0260 Putative magnesium transporter K16073 ALR; magnesium transporter D PAS_chr2-2_0005 Plasma membrane Mg(2+) transporter, expression and turnover are regulated by Mg(2+) concentration K16073 ALR; magnesium transporter D PAS_chr3_0706 Mitochondrial inner membrane Mg(2+) channel K16075 MRS2; magnesium transporter D PAS_chr2-1_0834 hypothetical protein K16075 MRS2; magnesium transporter D PAS_chr3_0020 Putative protein of unknown function K06199 crcB; fluoride exporter D PAS_chr2-1_0504 Peroxisomal membrane protein K13352 PEX11B; peroxin-11B D PAS_chr2-2_0173 Protein required for normal mitochondrial morphology, has similarity to hemolysins K16302 CNNM; metal transporter CNNM D PAS_chr2-2_0205 Essential component of the Sorting and Assembly Machinery of the mitochondrial outer membrane K07277 SAM50; outer membrane protein insertion porin family D PAS_chr1-4_0648 Sorting and Assembly Machinery complex K07277 SAM50; outer membrane protein insertion porin family D PAS_chr1-1_0138 Component of the mitochondrial outer membrane sorting and assembly machinery (SAM) complex K17714 SAM37; sorting and assembly machinery component 37 D PAS_chr4_0936 hypothetical protein K17715 SAM35; sorting and assembly machinery component 35 D PAS_chr1-1_0247 Subunit of both the Mdm10-Mdm12-Mmm1 complex and the mitochondrial sorting and assembly machinery K17774 MDM10; mitochondrial distribution and morphology protein 10 D PAS_chr4_0270 Mitochondrial protein involved in sorting of proteins in the mitochondria K22530 ATAD1; outer mitochondrial transmembrane helix translocase D PAS_chr3_0511 Choline/ethanolamine transporter K19564 CTR; choline transport protein D PAS_chr3_0848 High affinity polyamine permease K16261 YAT; yeast amino acid transporter D PAS_chr4_0019 Component of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p) K16261 YAT; yeast amino acid transporter D PAS_chr1-4_0479 General amino acid permease K16261 YAT; yeast amino acid transporter D PAS_chr2-1_0049 Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre K16261 YAT; yeast amino acid transporter D PAS_chr1-4_0601 Plasma membrane arginine permease, requires phosphatidyl ethanolamine (PE) for localization K16261 YAT; yeast amino acid transporter D PAS_chr1-1_0030 General amino acid permease K16261 YAT; yeast amino acid transporter D PAS_chr2-1_0129 Proline permease, required for high-affinity transport of proline K16261 YAT; yeast amino acid transporter D PAS_chr4_0287 Dicarboxylic amino acid permease K16261 YAT; yeast amino acid transporter D PAS_chr1-1_0341 Lysine permease K16261 YAT; yeast amino acid transporter D PAS_chr2-1_0659 Proline permease, required for high-affinity transport of proline K16261 YAT; yeast amino acid transporter D PAS_chr1-1_0203 General amino acid permease K16261 YAT; yeast amino acid transporter D PAS_chr3_0182 Dicarboxylic amino acid permease K16261 YAT; yeast amino acid transporter D PAS_chr3_0966 Vacuolar membrane zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family D PAS_chr3_0916 Golgi GDP-mannose transporter K15356 GONST1_2; GDP-mannose transporter D PAS_chr2-1_0349 Mitochondrial integral inner membrane protein required for membrane insertion of C-terminus of Cox2p K17797 COX18; mitochondrial inner membrane protein COX18 D PAS_chr4_0647 Low affinity vacuolar membrane localized monovalent cation/H+ antiporter K07300 chaA; Ca2+:H+ antiporter D PAS_FragD_0024 Vacuolar H+/Ca2+ exchanger involved in control of cytosolic Ca2+ concentration K07300 chaA; Ca2+:H+ antiporter D PAS_chr4_0439 Plasma membrane transporter for both urea and polyamines K20989 DUR3; urea-proton symporter D PAS_chr2-1_0055 Plasma membrane transporter for both urea and polyamines, expression is highly sensitive to nitrogen K20989 DUR3; urea-proton symporter D PAS_chr3_0024 Plasma membrane transporter for both urea and polyamines, expression is highly sensitive to nitrogen K20989 DUR3; urea-proton symporter D PAS_chr3_0282 Plasma membrane transporter for both urea and polyamines K20989 DUR3; urea-proton symporter D PAS_chr2-2_0115 Boron efflux transporter of the plasma membrane K24194 BOR; boron transporter D PAS_chr3_0409 Na+/H+ antiporter involved in sodium and potassium efflux through the plasma membrane K24160 NHA1; sodium/hydrogen antiporter D PAS_chr1-4_0030 Putative K+/H+ antiporter with a probable role in intracellular cation homeostasis K26731 CHX; K+:H+ antiporter D PAS_chr2-2_0143 Component of the Trk1p-Trk2p potassium transport system K24976 TRK; Trk/Ktr/HKT type cation transporter D PAS_chr1-4_0518 hypothetical protein K23887 UAPA_C; uric acid-xanthine permease D PAS_chr3_0495 Low-affinity phosphate transporter of the vacuolar membrane K14430 PHO87_91; phosphate transporter D PAS_chr1-1_0069 Plasma membrane protein involved in remodeling GPI anchors K25162 GUP1_2; membrane-bound O-acyltransferase GUP1_2 D PAS_chr1-1_0266 hypothetical protein K03321 TC.SULP; sulfate permease, SulP family D PAS_chr1-4_0246 Divalent metal ion transporter involved in manganese homeostasis K12346 SMF; metal iron transporter D PAS_chr3_0971 Divalent metal ion transporter with a broad specificity for di-valent and tri-valent metals K12346 SMF; metal iron transporter D PAS_chr3_0714 Putative divalent metal ion transporter involved in iron homeostasis K12346 SMF; metal iron transporter D PAS_chr4_0405 Guanine nucleotide exchange factor for Gpa1p K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PAS_chr1-1_0281 Arsenite transporter of the plasma membrane, required for resistance to arsenic compounds K03325 ACR3; arsenite transporter D PAS_chr4_0443 Flippase, essential integral membrane protein that is required for translocation of Man5GlcNac2-PP-D K06316 RFT1; oligosaccharide translocation protein RFT1 D PAS_chr4_0177 Non-essential protein of unknown function K24139 PILS; auxin efflux carrier family protein D PAS_chr4_0216 Non-essential protein of unknown function K24139 PILS; auxin efflux carrier family protein D PAS_chr4_0917 hypothetical protein K24139 PILS; auxin efflux carrier family protein D PAS_chr3_0372 Putative vacuolar Fe2+/Mn2+ transporter K22736 VIT; vacuolar iron transporter family protein D PAS_chr1-4_0232 hypothetical protein K24195 XPR1; xenotropic and polytropic retrovirus receptor 1 D PAS_chr4_0998 hypothetical protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial D PAS_chr2-1_0480 Mitochondrial inner membrane protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial D PAS_chr2-2_0062 Putative protein of unknown function K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D PAS_chr1-4_0040 High affinity iron permease involved in the transport of iron across the plasma membrane K07243 FTR; high-affinity iron transporter D PAS_chr2-1_0427 Putative high affinity iron transporter involved in transport of intravacuolar stores of iron K07243 FTR; high-affinity iron transporter D PAS_chr4_0619 Putative high affinity iron transporter involved in transport of intravacuolar stores of iron K07243 FTR; high-affinity iron transporter D PAS_chr2-1_0787 Ferro-O2-oxidoreductase K19791 FET3_5; iron transport multicopper oxidase D PAS_chr1-4_0041 Multicopper oxidase, integral membrane protein with similarity to Fet3p K19791 FET3_5; iron transport multicopper oxidase D PAS_chr1-4_0646 Oxysterol-binding protein K22285 OSBPL8; oxysterol-binding protein-related protein 8 D PAS_chr3_0368 P-type ATPase, ion transporter of the ER membrane involved in ER function and Ca2+ homeostasis K14950 ATP13A1; manganese-transporting P-type ATPase [EC:7.2.2.-] D PAS_chr4_0350 hypothetical protein K17773 TOM5; mitochondrial import receptor subunit TOM5 D PAS_chr1-3_0076 hypothetical protein K17772 TOM6; mitochondrial import receptor subunit TOM6 D PAS_chr3_1190 hypothetical protein K17771 TOM7; mitochondrial import receptor subunit TOM7 D PAS_chr3_0584 Component of the TOM (translocase of outer membrane) complex K17770 TOM20; mitochondrial import receptor subunit TOM20 D PAS_chr2-2_0356 hypothetical protein K17769 TOM22; mitochondrial import receptor subunit TOM22 D PAS_chr4_0391 Component of the TOM (translocase of outer membrane) complex K11518 TOM40; mitochondrial import receptor subunit TOM40 D PAS_chr2-2_0370 Component (70 kDa) of the TOM (translocase of outer membrane) complex K17768 TOM70; mitochondrial import receptor subunit TOM70 D PAS_chr3_0382 Mitochondrial intermembrane space protein K17777 TIM9; mitochondrial import inner membrane translocase subunit TIM9 D PAS_chr2-2_0291 Essential protein of the mitochondrial intermembrane space, forms a complex with Tim9p K17778 TIM10; mitochondrial import inner membrane translocase subunit TIM10 D PAS_chr4_0561 Mitochondrial intermembrane space protein, forms a complex with TIm8p K17781 TIM13; mitochondrial import inner membrane translocase subunit TIM13 D PAS_chr2-2_0102 Essential constituent of the mitochondrial inner membrane presequence translocase K17795 TIM17; mitochondrial import inner membrane translocase subunit TIM17 D PAS_chr3_0307 Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex) K17796 TIM21; mitochondrial import inner membrane translocase subunit TIM21 D PAS_chr1-4_0676 hypothetical protein K17790 TIM22; mitochondrial import inner membrane translocase subunit TIM22 D PAS_chr1-4_0248 Essential protein of the mitochondrial inner membrane, component of the mitochondrial import system K17794 TIM23; mitochondrial import inner membrane translocase subunit TIM23 D PAS_chr3_0537 Peripheral mitochondrial membrane protein involved in mitochondrial protein import K17804 TIM44; mitochondrial import inner membrane translocase subunit TIM44 D PAS_chr2-2_0081 Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex) K17496 TIM50; mitochondrial import inner membrane translocase subunit TIM50 D PAS_chr1-1_0032 Component of the mitochondrial Tim54p-Tim22p complex K17792 TIM54; mitochondrial import inner membrane translocase subunit TIM54 D PAS_chr2-1_0670 Essential protein of the mitochondrial intermembrane space (IMS) K17782 MIA40; mitochondrial intermembrane space import and assembly protein 40 D PAS_chr4_0403 hypothetical protein K22384 GET1; tail-anchored protein insertion receptor D PAS_chr3_0197 hypothetical protein K22386 GET2; GET complex subunit GET2 D PAS_chr2-2_0394 hypothetical protein K17286 STOM; stomatin D PAS_chr3_0955 hypothetical protein K26392 STOML2; stomatin-like protein 2 D PAS_chr2-1_0068 N-glycosylated integral membrane protein of the ER membrane and plasma membrane, functions as a stre K08284 MID1; calcium channel MID1 D PAS_chr1-4_0225 ER-derived vesicles protein ERV14 K20368 CNIH; protein cornichon D PAS_chr3_1058 Putative integral membrane protein K27385 SUR7; SUR7 family protein D PAS_chr3_0287 Integral membrane protein localized to mitochondria (untagged protein) and eisosomes, immobile patch K27385 SUR7; SUR7 family protein D PAS_chr2-1_0722 Protein of unknown function with similarity to Ykl050cp and Uso1p K27386 EIS1; eisosome protein 1 D PAS_chr3_0227 Primary component of eisosomes K27388 PIL1; sphingolipid long chain base-responsive protein PIL1/LSP1 D PAS_chr1-4_0569 Primary component of eisosomes K27388 PIL1; sphingolipid long chain base-responsive protein PIL1/LSP1 D PAS_chr2-2_0009 Low-affinity Fe(II) transporter of the plasma membrane K19792 FET4; low-affinity ferrous iron transport protein D PAS_chr4_0008 Low-affinity Fe(II) transporter of the plasma membrane K19792 FET4; low-affinity ferrous iron transport protein D PAS_chr4_0504 hypothetical protein K27384 NCE102; non-classical export protein 2 D PAS_chr3_1168 hypothetical protein K27164 SND2; SRP-independent targeting protein 2 D PAS_chr4_0564 Phosphatidylinositol transfer protein (PITP) K26544 SEC14; phosphatidylinositol/phosphatidylcholine transfer protein D PAS_chr3_0844 Phosphatidylinositol transfer protein (PITP) K26544 SEC14; phosphatidylinositol/phosphatidylcholine transfer protein D PAS_chr3_0655 Phosphatidylinositol/phosphatidylcholine transfer protein K26544 SEC14; phosphatidylinositol/phosphatidylcholine transfer protein D PAS_chr1-4_0329 hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:ppa02044] D PAS_chr1-1_0163 Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and dTTP synthesis K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PAS_chr4_0322 Signal recognition particle (SRP) subunit (homolog of mammalian SRP54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PAS_chr1-4_0577 Mitochondrial inner membrane insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAS_chr1-4_0629 Subunit of the Ssh1 translocon complex K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr1-3_0202 Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p) K10956 SEC61A; protein transport protein SEC61 subunit alpha D PAS_chr2-2_0210 Beta subunit of the Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p) K09481 SEC61B; protein transport protein SEC61 subunit beta D PAS_chr1-1_0023 hypothetical protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D PAS_chr3_1014 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K12275 SEC62; translocation protein SEC62 D PAS_chr4_0395 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K09540 SEC63; translocation protein SEC63 D PAS_chr2-1_0433 Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K12273 SEC66; translocation protein SEC66 D PAS_chr2-1_0448 Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) K12274 SEC72; translocation protein SEC72 D PAS_chr3_0534 Subunit of the signal recognition particle (SRP), involved in protein targeting to the ER K03105 SRP19; signal recognition particle subunit SRP19 D PAS_chr1-4_0134 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex K03107 SRP68; signal recognition particle subunit SRP68 D PAS_chr1-4_0210 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex K03108 SRP72; signal recognition particle subunit SRP72 D PAS_chr2-1_0379 Signal recognition particle (SRP) receptor-alpha subunit K13431 SRPR; signal recognition particle receptor subunit alpha D PAS_chr2-1_0636 Signal recognition particle (SRP) receptor beta subunit K12272 SRPRB; signal recognition particle receptor subunit beta D PAS_chr1-4_0231 Essential phosphoprotein component (p150) of the COPII coat of secretory pathway vesicles K14005 SEC31; protein transport protein SEC31 C 02042 Bacterial toxins C 02022 Two-component system [BR:ppa02022] D PAS_chr4_0315 Histidine kinase osmosensor that regulates a MAP kinase cascade K11231 SLN1; osomolarity two-component system, sensor histidine kinase SLN1 [EC:2.7.13.3] D PAS_chr2-1_0162 Histidine kinase osmosensor that regulates a MAP kinase cascade K19691 NIK1; osomolarity two-component system, sensor histidine kinase NIK1 [EC:2.7.13.3] D PAS_chr2-2_0033 Phosphorelay intermediate protein K11232 YPD1; osomolarity two-component system, phosphorelay intermediate protein YPD1 D PAS_chr3_0849 Cytoplasmic response regulator, part of a two-component signal transducer that mediates osmosensing K11233 SSK1; osomolarity two-component system, response regulator SSK1 D PAS_chr3_1235 hypothetical protein K15859 SKN7; osomolarity two-component system, response regulator SKN7 C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins [BR:ppa03037] D PAS_chr2-1_0113 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol K09493 CCT1; T-complex protein 1 subunit alpha D PAS_chr4_0121 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09494 CCT2; T-complex protein 1 subunit beta D PAS_chr2-2_0402 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09495 CCT3; T-complex protein 1 subunit gamma D PAS_chr3_0571 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09496 CCT4; T-complex protein 1 subunit delta D PAS_chr2-1_0555 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09497 CCT5; T-complex protein 1 subunit epsilon D PAS_chr3_0300 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09500 CCT8; T-complex protein 1 subunit theta D PAS_chr3_1140 Cytoplasmic light chain dynein, microtubule motor protein K10418 DYNLL; dynein light chain LC8-type D PAS_chr4_0475 Essential protein involved in transcription regulation K04499 RUVBL1; RuvB-like protein 1 [EC:5.6.2.4] D PAS_chr2-1_0688 Essential protein involved in transcription regulation K11338 RUVBL2; RuvB-like protein 2 [EC:5.6.2.3] D PAS_chr4_0846 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16938 SEPT3_9_12; septin 3/9/12 D PAS_chr4_0548 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16944 SEPT7; septin 7 D PAS_chr1-4_0081 Protein phosphatase required for mitotic exit K06639 CDC14; cell division cycle 14 [EC:3.1.3.16 3.1.3.48] D PAS_chr3_0838 Twinfilin, highly conserved actin monomer-sequestering protein K08870 TWF; twinfilin C 04812 Cytoskeleton proteins [BR:ppa04812] D PAS_chr3_1169 hypothetical protein K10355 ACTF; actin, other eukaryote D PAS_chr1-1_0263 Actin-related protein of the dynactin complex K16575 ACTR1; centractin D PAS_chr1-1_0020 Actin-like protein K11662 ACTR6; actin-related protein 6 D PAS_chr4_0618 One of two type I myosins K10356 MYO1; myosin I D PAS_FragB_0012 Myosin-2 K10357 MYO5; myosin V D PAS_chr3_0823 Type II myosin heavy chain, required for wild-type cytokinesis and cell separation K10352 MYH9s; myosin heavy chain 9/10/11/14 D PAS_chr2-2_0328 Subunit of the ARP2/3 complex K05757 ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B D PAS_chr3_1121 Subunit of the ARP2/3 complex K05758 ARPC2; actin related protein 2/3 complex, subunit 2 D PAS_chr3_0238 Subunit of the ARP2/3 complex K05756 ARPC3; actin related protein 2/3 complex, subunit 3 D PAS_chr1-4_0185 Subunit of the ARP2/3 complex K05755 ARPC4; actin related protein 2/3 complex, subunit 4 D PAS_chr2-2_0029 Subunit of the ARP2/3 complex K05754 ARPC5; actin related protein 2/3 complex, subunit 5 D PAS_chr3_0458 Essential component of the Arp2/3 complex K17260 ACTR2; actin-related protein 2 D PAS_chr2-1_0556 Essential component of the Arp2/3 complex K18584 ACTR3; actin-related protein 3 D PAS_chr1-4_0623 Actin assembly factor, activates the Arp2/3 protein complex that nucleates branched actin filaments K23612 WASL; neural Wiskott-Aldrich syndrome protein D PAS_chr3_0106 Profilin, actin-and phosphatidylinositol 4,5-bisphosphate-binding protein, involved in cytoskeleton K05759 PFN; profilin D PAS_chr1-4_0027 Cofilin, promotes actin filament depolarization in a pH-dependent manner K05765 CFL; cofilin D PAS_c131_0006 hypothetical protein K10364 CAPZA; F-actin-capping protein subunit alpha D PAS_chr3_0548 Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) K10365 CAPZB; F-actin-capping protein subunit beta D PAS_chr4_0115 Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments K17945 TPM1_2; tropomyosin, fungi type D PAS_chr2-1_0591 Coronin, cortical actin cytoskeletal component K13886 CORO1B_1C_6; coronin-1B/1C/6 D PAS_chr1-4_0128 Essential protein required for determination of budding pattern K05767 IQGAP2_3; Ras GTPase-activating-like protein IQGAP2/3 D PAS_chr4_0581 Protein of unknown function, required for survival upon exposure to K1 killer toxin K18624 MAEA; macrophage erythroblast attacher D PAS_chr2-1_0631 Fimbrin, actin-bundling protein K17275 PLS1; plastin-1 D PAS_chr2-1_0186 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0623 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0533 Beta-tubulin K07375 TUBB; tubulin beta D PAS_chr4_0148 Gamma-tubulin K10389 TUBG; tubulin gamma D PAS_chr4_0160 Kinesin-related motor protein required for mitotic spindle assembly and chromosome segregation K10398 KIF11; kinesin family member 11 D PAS_chr1-4_0497 Kinesin-related motor protein involved in mitotic spindle positioning K10401 KIF18A; kinesin family member 18A D PAS_chr4_0900 Kinesin-like protein K10405 KIFC1; kinesin family member C1 D PAS_chr1-4_0443 hypothetical protein K10415 DYNC1I; dynein cytoplasmic 1 intermediate chain D PAS_chr3_1140 Cytoplasmic light chain dynein, microtubule motor protein K10418 DYNLL; dynein light chain LC8-type D PAS_chr4_0389 Large subunit of the dynactin complex K04648 DCTN1; dynactin 1 D PAS_chr3_1019 hypothetical protein K10426 DCTN4; dynactin 4 D PAS_chr1-1_0268 hypothetical protein K18599 JNM1; nuclear migration protein JNM1 D PAS_chr2-1_0377 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex K16569 TUBGCP2; gamma-tubulin complex component 2 D PAS_chr2-2_0354 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex K16570 TUBGCP3; gamma-tubulin complex component 3 D PAS_chr4_0282 Microtubule-associated protein (MAP) of the XMAP215/Dis1 family K24394 STU2; protein STU2 D PAS_chr3_0913 Component of the mitotic spindle that binds to interpolar microtubules K16578 CLASP1_2; CLIP-associating protein 1/2 D PAS_chr4_0999 hypothetical protein K10436 MAPRE; microtubule-associated protein, RP/EB family D PAS_chr4_0137 Putative tubulin tyrosine ligase associated with P-bodies K06047 TTL; tubulin---tyrosine ligase [EC:6.3.2.25] D PAS_chr2-1_0331 Mitotic spindle midzone localized microtubule-associated protein (MAP) family member K16732 PRC1; Ase1/PRC1/MAP65 family protein D PAS_chr3_0078 Putative protein of unknown function K06990 MEMO1; MEMO1 family protein D PAS_chr1-1_0261 Alpha-tubulin folding protein, similar to mammalian cofactor B K17262 TBCB; tubulin-specific chaperone B D PAS_chr1-4_0131 hypothetical protein K21766 TBCC; tubulin-specific chaperone C D PAS_chr3_0320 Tubulin folding factor D K21767 TBCD; tubulin-specific chaperone D D PAS_chr2-1_0630 Microtubule effector required for tubulin heterodimer formation K21768 TBCE; tubulin-specific chaperone E D PAS_chr4_0846 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16938 SEPT3_9_12; septin 3/9/12 D PAS_chr4_0548 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16944 SEPT7; septin 7 D PAS_chr3_0967 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16945 CDC11; cell division control protein 11 D PAS_chr3_0977 One of five related septins (Cdc3p, Cdc10p, Cdc11p, Cdc12p, Shs1p) K16946 SHS1; seventh homolog of septin 1 D PAS_chr3_0397 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16947 SPR28; sporulation-regulated protein 28 D PAS_chr4_0293 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16948 CDC12; cell division control protein 12 D PAS_FragD_0011 Sporulation-specific homolog of the yeast CDC3/10/11/12 family of bud neck microfilament genes K12773 SPR3; sporulation-regulated protein 3 D PAS_chr2-1_0700 Integral plasma membrane protein required for axial budding in haploid cells K18637 AXL2; axial budding pattern protein 2 D PAS_chr4_0977 hypothetical protein K18638 BNI4; protein BNI4 D PAS_chr1-1_0340 Protein kinase involved in bud growth and assembly of the septin ring K06668 GIN4; serine/threonine-protein kinase GIN4 [EC:2.7.11.-] D PAS_chr3_0129 SUMO/Smt3 ligase that promotes the attachment of sumo (Smt3p K04706 PIAS1; E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-] C 04147 Exosome [BR:ppa04147] D PAS_chr1-4_0027 Cofilin, promotes actin filament depolarization in a pH-dependent manner K05765 CFL; cofilin D PAS_chr4_0618 One of two type I myosins K10356 MYO1; myosin I D PAS_chr3_0106 Profilin, actin-and phosphatidylinositol 4,5-bisphosphate-binding protein, involved in cytoskeleton K05759 PFN; profilin D PAS_chr3_0731 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr4_0552 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr3_0230 ATPase involved in protein folding and the response to stress K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PAS_chr1-4_0130 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D PAS_chr3_0082 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAS_chr2-1_0437 Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAS_chr1-4_0292 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PAS_chr2-1_0769 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAS_chr2-2_0220 Thioredoxin peroxidase, acts as both a ribosome-associated and free cytoplasmic antioxidant K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D PAS_chr1-3_0184 Protein involved in proteolytic activation of Rim101p in response to alkaline pH K12200 PDCD6IP; programmed cell death 6-interacting protein D PAS_chr3_0136 Component of the ESCRT-I complex, which is involved in ubiquitin-dependent sorting of proteins into K12183 TSG101; ESCRT-I complex subunit TSG101 D PAS_chr2-1_0809 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D PAS_FragB_0052 Translational elongation factor EF-1 alpha K03231 EEF1A; elongation factor 1-alpha D PAS_chr2-1_0812 hypothetical protein K03234 EEF2; elongation factor 2 D PAS_chr2-2_0087 ADP-ribosylation factor, GTPase of the Ras superfamily K07937 ARF1_2; ADP-ribosylation factor 1/2 D PAS_chr1-4_0546 Clathrin heavy chain, subunit of the major coat protein K04646 CLTC; clathrin heavy chain D PAS_chr3_0531 GDP dissociation inhibitor K17255 GDI1_2; Rab GDP dissociation inhibitor D PAS_chr3_0458 Essential component of the Arp2/3 complex K17260 ACTR2; actin-related protein 2 D PAS_chr2-1_0556 Essential component of the Arp2/3 complex K18584 ACTR3; actin-related protein 3 D PAS_chr2-2_0067 CAP (cyclase-associated protein) subunit of adenylyl cyclase complex K17261 CAP1_2; adenylyl cyclase-associated protein D PAS_c131_0006 hypothetical protein K10364 CAPZA; F-actin-capping protein subunit alpha D PAS_chr3_0548 Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) K10365 CAPZB; F-actin-capping protein subunit beta D PAS_chr3_0751 Dynamin-related GTPase K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5] D PAS_chr4_0505 Subunit of the prohibitin complex (Phb1p-Phb2p) K17080 PHB1; prohibitin 1 D PAS_chr4_0548 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16944 SEPT7; septin 7 D PAS_chr4_0846 Component of the septin ring of the mother-bud neck that is required for cytokinesis K16938 SEPT3_9_12; septin 3/9/12 D PAS_chr1-4_0113 hypothetical protein K16365 SGTA; small glutamine-rich tetratricopeptide repeat-containing protein alpha D PAS_chr2-1_0186 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr4_0623 Alpha-tubulin K07374 TUBA; tubulin alpha D PAS_chr1-1_0261 Alpha-tubulin folding protein, similar to mammalian cofactor B K17262 TBCB; tubulin-specific chaperone B D PAS_chr2-1_0377 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex K16569 TUBGCP2; gamma-tubulin complex component 2 D PAS_chr2-2_0354 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex K16570 TUBGCP3; gamma-tubulin complex component 3 D PAS_chr2-1_0140 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding I K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10] D PAS_chr4_0158 Tetradecameric mitochondrial chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAS_chr3_0365 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr3_0402 Mitochondrial matrix ATPase K04043 dnaK; molecular chaperone DnaK D PAS_chr2-1_0113 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol K09493 CCT1; T-complex protein 1 subunit alpha D PAS_chr4_0121 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09494 CCT2; T-complex protein 1 subunit beta D PAS_chr2-2_0402 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09495 CCT3; T-complex protein 1 subunit gamma D PAS_chr3_0571 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09496 CCT4; T-complex protein 1 subunit delta D PAS_chr2-1_0555 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p K09497 CCT5; T-complex protein 1 subunit epsilon D PAS_chr4_0513 Subunit of the cytosolic chaperonin Cct ring complex K09498 CCT6; T-complex protein 1 subunit zeta D PAS_chr2-1_0079 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of K09499 CCT7; T-complex protein 1 subunit eta D PAS_chr3_0456 Glycolytic enzyme phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAS_chr4_0974 hypothetical protein K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1] D PAS_chr1-1_0307 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] D PAS_chr1-4_0633 5' to 3' exonuclease, 5' flap endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PAS_chr3_0722 ubiquitin-40S ribosomal protein S31 fusion protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PAS_chr1-1_0128 hypothetical protein K17263 CAND1; cullin-associated NEDD8-dissociated protein 1 D PAS_chr2-1_0182 Component of the ESCRT-I complex (Stp22p, Srn2p, Vps28p, and Mvb12p), which is involved in ubiquitin K12184 VPS28; ESCRT-I complex subunit VPS28 D PAS_chr1-4_0657 Vacuolar protein sorting protein K12197 CHMP1; charged multivesicular body protein 1 D PAS_c131_0013 hypothetical protein K12191 CHMP2A; charged multivesicular body protein 2A D PAS_chr1-4_0023 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III) K12194 CHMP4A_B; charged multivesicular body protein 4A/B D PAS_chr4_0420 Myristoylated subunit of ESCRTIII K12195 CHMP6; charged multivesicular body protein 6 D PAS_chr3_0856 Ubiquitin activating enzyme (E1), involved in ubiquitin-mediated protein degradation K03178 UBE1; ubiquitin-activating enzyme E1 [EC:6.2.1.45] D PAS_chr3_0933 Ubiquitin-specific protease that specifically disassembles unanchored ubiquitin chains K11836 USP5_13; ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12] D PAS_chr2-1_0291 Alpha 6 subunit of the 20S proteasome K02725 PSMA1; 20S proteasome subunit alpha 6 [EC:3.4.25.1] D PAS_chr3_0562 Mitochondrial translation elongation factor Tu K02358 tuf; elongation factor Tu D PAS_chr1-4_0147 eukaryotic translation initiation factor 3 subunit K03250 EIF3E; translation initiation factor 3 subunit E D PAS_chr1-4_0289 hypothetical protein K03249 EIF3F; translation initiation factor 3 subunit F D PAS_chr3_0595 Translation initiation factor eIF4A, identical to Tif1p K03257 EIF4A; translation initiation factor 4A D PAS_chr1-1_0201 G protein beta subunit, forms a dimer with Ste18p to activate the mating signaling pathway K04536 GNB1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_chr3_1167 hypothetical protein K07874 RAB1A; Ras-related protein Rab-1A D PAS_chr1-4_0162 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5 K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0219 GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0899 GTP-binding protein K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr2-1_0669 GTPase K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr3_0143 Secretory vesicle-associated Rab GTPase essential for exocytosis K07901 RAB8A; Ras-related protein Rab-8A D PAS_chr1-4_0528 GTPase of the Ypt/Rab family, very similar to Ypt31p K07905 RAB11B; Ras-related protein Rab-11B D PAS_chr1-3_0113 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04392 RAC1; Ras-related C3 botulinum toxin substrate 1 D PAS_chr2-2_0347 GTP-binding protein of the ras superfamily required for bud site selection K07836 RAP1B; Ras-related protein Rap-1B D PAS_chr3_0150 GTP-binding protein of the rho subfamily of Ras-like proteins, involved in establishment of cell pol K04513 RHOA; Ras homolog gene family, member A D PAS_chr4_0214 Glucose-repressible ADP-ribosylation factor K07941 ARF6; ADP-ribosylation factor 6 D PAS_chr1-1_0305 Rho GDP dissociation inhibitor involved in the localization and regulation of Cdc42p K12462 ARHGDI; Rho GDP-dissociation inhibitor D PAS_chr4_0225 Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat K17267 COPG; coatomer subunit gamma D PAS_chr3_0690 Epsilon-COP subunit of the coatomer K17268 COPE; coatomer subunit epsilon D PAS_chr4_0530 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr2-1_0872 hypothetical protein K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24] D PAS_chr2-1_0773 Protein with a role in cellular adhesion and filamentous growth K17086 TM9SF2_4; transmembrane 9 superfamily member 2/4 D PAS_chr1-3_0141 Protein with a role in cellular adhesion and filamentous growth K17086 TM9SF2_4; transmembrane 9 superfamily member 2/4 D PAS_chr3_1092 Protein involved in nuclear migration, part of the dynein/dynactin pathway K16794 PAFAH1B1; platelet-activating factor acetylhydrolase IB subunit alpha D PAS_FragD_0026 ATPase in ER, nuclear membrane and cytosol with homology to mammalian P97 K13525 VCP; transitional endoplasmic reticulum ATPase D PAS_chr4_0157 Histone variant H2AZ, exchanged for histone H2A in nucleosomes by the SWR1 complex K11251 H2A; histone H2A D PAS_chr2-1_0429 One of two nearly identical (see also HTA1) histone H2A subtypes K11251 H2A; histone H2A D PAS_chr2-1_0428 One of two nearly identical (see HTB1) histone H2B subtypes K11252 H2B; histone H2B D PAS_chr2-2_0199 One of two identical histone H3 proteins (see also HHT2) K11253 H3; histone H3 D PAS_chr2-1_0112 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04393 CDC42; cell division control protein 42 D PAS_chr2-1_0631 Fimbrin, actin-bundling protein K17275 PLS1; plastin-1 D PAS_chr1-4_0294 Plasma membrane t-SNARE involved in fusion of secretory vesicles at the plasma membrane K08486 STX1B_2_3; syntaxin 1B/2/3 D PAS_chr4_0396 Heme-binding protein involved in regulation of cytochrome P450 protein Erg11p K17278 PGRMC1_2; membrane-associated progesterone receptor component D PAS_chr2-1_0538 Membrane protein that interacts with Yip1p to mediate membrane traffic K17279 REEP5_6; receptor expression-enhancing protein 5/6 D PAS_chr2-1_0719 Putative transporter, member of the SLC10 carrier family K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PAS_chr3_0935 Putative ATP-dependent permease of the ABC transporter family of proteins K05681 ABCG2; ATP-binding cassette, subfamily G (WHITE), member 2 D PAS_chr2-1_0785 Long chain fatty acyl-CoA synthetase with a preference for C12:0-C16:0 fatty acids K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr4_0352 Long chain fatty acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAS_chr2-2_0394 hypothetical protein K17286 STOM; stomatin D PAS_chr2-2_0112 hypothetical protein K00106 XDH; xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] D PAS_chr4_0533 Beta-tubulin K07375 TUBB; tubulin beta D PAS_chr1-4_0304 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAS_chr3_0890 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PAS_chr3_0257 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PAS_chr3_1138 Adenine phosphoribosyltransferase, catalyzes the formation of AMP K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PAS_chr1-1_0389 Argininosuccinate lyase, catalyzes the final step in the arginine biosynthesis pathway K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAS_chr3_0216 Arginosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAS_chr3_1093 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) K02154 ATPeV0A; V-type H+-transporting ATPase subunit a D PAS_chr1-3_0066 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) K02154 ATPeV0A; V-type H+-transporting ATPase subunit a D PAS_c131_0021 vacuolar ATP synthase subunit B K02147 ATPeV1B; V-type H+-transporting ATPase subunit B D PAS_chr1-4_0013 carboxypeptidase Y K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5] D PAS_chr1-4_0489 Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D PAS_chr3_0868 Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAS_chr1-1_0215 Processing alpha glucosidase I, ER type II integral membrane N-glycoprotein K01228 MOGS; mannosyl-oligosaccharide glucosidase [EC:3.2.1.106] D PAS_chr4_0783 Glycerol kinase, converts glycerol to glycerol-3-phosphate K00864 glpK; glycerol kinase [EC:2.7.1.30] D PAS_chr4_0785 Glutamine synthetase (GS), synthesizes glutamine from glutamate and ammonia K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAS_chr1-4_0496 Glutathione synthetase K21456 GSS; glutathione synthase [EC:6.3.2.3] D PAS_chr4_0418 Delta-aminolevulinate dehydratase, a homo-octameric enzyme K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PAS_chr4_0335 hypothetical protein K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PAS_chr2-2_0407 Beta subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle K01900 LSC2; succinyl-CoA synthetase beta subunit [EC:6.2.1.4 6.2.1.5] D PAS_chr1-4_0632 C-1-tetrahydrofolate synthase, mitochondrial K00288 MTHFD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3] D PAS_chr1-4_0110 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D PAS_chr2-2_0084 Repressible alkaline phosphatase, a glycoprotein localized to the vacuole K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAS_chr2-1_0657 3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAS_chr2-1_0660 Enzyme of 'de novo' purine biosynthesis K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAS_chr2-2_0164 Highly conserved zinc metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D PAS_chr3_1165 hypothetical protein K12188 SNF8; ESCRT-II complex subunit VPS22 D PAS_chr4_0993 hypothetical protein K12189 VPS25; ESCRT-II complex subunit VPS25 D PAS_chr3_0312 Component of the ESCRT-II complex K12190 VPS36; ESCRT-II complex subunit VPS36 D PAS_chr1-1_0034 vacuolar sorting protein K12193 VPS24; charged multivesicular body protein 3 D PAS_chr1-3_0288 hypothetical protein K15053 CHMP7; charged multivesicular body protein 7 D PAS_chr4_0576 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-1_0357 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAS_chr1-4_0063 G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein D PAS_chr1-4_0128 Essential protein required for determination of budding pattern K05767 IQGAP2_3; Ras GTPase-activating-like protein IQGAP2/3 D PAS_chr2-1_0050 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of A-factor, catalyze K05658 ABCB1; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] D PAS_chr3_0858 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of A-factor K05658 ABCB1; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] D PAS_chr1-1_0294 Alpha subunit of COPI vesicle coatomer complex K05236 COPA; coatomer subunit alpha D PAS_chr3_0821 Protein with similarity to human cystinosin K12386 CTNS; cystinosin D PAS_chr2-1_0560 Protein with similarity to human cystinosin, which is a H(+)-driven transporter K12386 CTNS; cystinosin D PAS_chr1-4_0609 Cullin, structural protein of SCF complexes K10609 CUL4; cullin 4 D PAS_chr4_0488 Mitochondrial phosphate carrier, imports inorganic phosphate into mitochondria K15102 SLC25A3; solute carrier family 25 (mitochondrial phosphate transporter), member 3 D PAS_chr1-4_0615 mitochondrial phosphate carrier protein K15102 SLC25A3; solute carrier family 25 (mitochondrial phosphate transporter), member 3 D PAS_chr4_0134 Sm-like protein involved in docking and fusion of exocytic vesicles K15292 STXBP1; syntaxin-binding protein 1 D PAS_chr2-1_0099 hypothetical protein K08515 VAMP7; vesicle-associated membrane protein 7 D PAS_chr2-2_0048 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAS_chr2-2_0334 Protein with similarity to mammalian electron transfer flavoprotein complex subunit ETF-alpha K03522 fixB; electron transfer flavoprotein alpha subunit D PAS_chr2-1_0308 Glucose-6-phosphate dehydrogenase (G6PD), catalyzes the first step of the pentose phosphate pathway K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAS_chr4_0844 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1] D PAS_chr2-1_0496 Alpha-adaptin, large subunit of the clathrin associated protein complex (AP-2) K11824 AP2A; AP-2 complex subunit alpha D PAS_chr1-4_0683 hypothetical protein K17081 PHB2; prohibitin 2 D PAS_chr2-1_0758 Calmodulin K02183 CALM; calmodulin D PAS_chr2-2_0435 hypothetical protein K02183 CALM; calmodulin D PAS_chr3_0951 Triose phosphate isomerase, abundant glycolytic enzyme K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PAS_chr3_0948 hypothetical protein K03247 EIF3H; translation initiation factor 3 subunit H D PAS_chr4_0798 Essential beta-coat protein of the COPI coatomer K17301 COPB1; coatomer subunit beta D PAS_chr1-1_0181 Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport K17302 COPB2; coatomer subunit beta' D PAS_chr4_0165 GTPase, Ras-like GTP binding protein involved in the secretory pathway K07893 RAB6A; Ras-related protein Rab-6A D PAS_chr1-1_0263 Actin-related protein of the dynactin complex K16575 ACTR1; centractin D PAS_chr3_0823 Type II myosin heavy chain, required for wild-type cytokinesis and cell separation K10352 MYH9s; myosin heavy chain 9/10/11/14 D PAS_chr3_0693 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAS_chr3_0826 Tetrameric phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ppa02048] D PAS_chr1-1_0241 Mitochondrial glutamyl-tRNA synthetase, encoded by a nuclear gene K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr1-4_0598 Glutamyl-tRNA synthetase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAS_chr3_0037 Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors [BR:ppa04030] D PAS_chr4_0123 Receptor for alpha-factor pheromone K11213 STE2; pheromone alpha factor receptor D PAS_chr3_0861 Receptor for a factor receptor, transcribed in alpha cells and required for mating by alpha cells K04627 STE3; pheromone a factor receptor D PAS_chr2-1_0078 Plasma membrane G protein coupled receptor (GPCR) that interacts with the heterotrimeric G protein A K12762 GPR1; G protein-coupled receptor GPR1 C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:ppa04040] D PAS_chr2-1_0471 Chloride channel localized to late-or post-Golgi vesicles, involved in iron metabolism K05012 CLCN3_4_5; chloride channel 3/4/5 D PAS_chr2-1_0501 Plasma membrane protein that may be involved in osmotolerance K19327 ANO10; anoctamin-10 D PAS_chr2-2_0392 Mitochondrial porin (voltage-dependent anion channel), outer membrane protein K15040 VDAC2; voltage-dependent anion channel protein 2 C 04031 GTP-binding proteins [BR:ppa04031] D PAS_chr1-1_0096 GTP-binding alpha subunit of the heterotrimeric G protein that couples to pheromone receptors K19860 GPA1; guanine nucleotide-binding protein alpha-1 subunit D PAS_chr1-1_0201 G protein beta subunit, forms a dimer with Ste18p to activate the mating signaling pathway K04536 GNB1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 D PAS_chr4_0766 hypothetical protein K07973 GNG; guanine nucleotide-binding protein subunit gamma, fungi D PAS_chr4_0680 GTP-binding protein K07827 KRAS; GTPase KRas D PAS_chr3_0133 GTP-binding protein of the ras superfamily required for bud site selection K07827 KRAS; GTPase KRas D PAS_chr2-2_0347 GTP-binding protein of the ras superfamily required for bud site selection K07836 RAP1B; Ras-related protein Rap-1B D PAS_chr2-2_0448 hypothetical protein K07208 RHEB; Ras homolog enriched in brain D PAS_chr3_0150 GTP-binding protein of the rho subfamily of Ras-like proteins, involved in establishment of cell pol K04513 RHOA; Ras homolog gene family, member A D PAS_chr1-3_0113 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04392 RAC1; Ras-related C3 botulinum toxin substrate 1 D PAS_chr2-1_0112 Small rho-like GTPase, essential for establishment and maintenance of cell polarity K04393 CDC42; cell division control protein 42 D PAS_chr3_0698 Evolutionarily-conserved tail-anchored outer mitochondrial membrane GTPase K07870 RHOT1; mitochondrial Rho GTPase 1 [EC:3.6.5.-] D PAS_chr2-1_0840 hypothetical protein K07975 K07975; Rho family, other D PAS_chr4_0222 Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins K07975 K07975; Rho family, other D PAS_chr3_1167 hypothetical protein K07874 RAB1A; Ras-related protein Rab-1A D PAS_chr1-4_0162 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5 K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0219 GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases K07889 RAB5C; Ras-related protein Rab-5C D PAS_chr4_0165 GTPase, Ras-like GTP binding protein involved in the secretory pathway K07893 RAB6A; Ras-related protein Rab-6A D PAS_chr4_0899 GTP-binding protein K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr2-1_0669 GTPase K07897 RAB7A; Ras-related protein Rab-7A D PAS_chr3_0143 Secretory vesicle-associated Rab GTPase essential for exocytosis K07901 RAB8A; Ras-related protein Rab-8A D PAS_chr1-4_0528 GTPase of the Ypt/Rab family, very similar to Ypt31p K07905 RAB11B; Ras-related protein Rab-11B D PAS_chr1-4_0626 GTP-binding protein YPT10 K07976 RAB; Rab family, other D PAS_chr2-1_0449 GTP binding protein (mammalian Ranp homolog) K07936 RAN; GTP-binding nuclear protein Ran D PAS_chr2-2_0087 ADP-ribosylation factor, GTPase of the Ras superfamily K07937 ARF1_2; ADP-ribosylation factor 1/2 D PAS_chr4_0214 Glucose-repressible ADP-ribosylation factor K07941 ARF6; ADP-ribosylation factor 6 D PAS_chr2-2_0316 Soluble GTPase with a role in regulation of membrane traffic K07942 ARL1; ADP-ribosylation factor-like protein 1 D PAS_chr4_0262 GTP-binding protein involved in beta-tubulin (Tub2p) folding K07943 ARL2; ADP-ribosylation factor-like protein 2 D PAS_chr2-2_0078 GTPase of the Ras superfamily required to recruit Arl1p to the Golgi K07952 ARFRP1; ADP-ribosylation factor related protein 1 D PAS_chr1-1_0180 GTPase; GTP-binding protein of the ARF family, component of COPII coat of vesicles K07953 SAR1; GTP-binding protein SAR1 [EC:3.6.5.-] D PAS_chr2-1_0527 hypothetical protein K07955 ARL8; ADP-ribosylation factor-like protein 8 D PAS_chr2-1_0636 Signal recognition particle (SRP) receptor beta subunit K12272 SRPRB; signal recognition particle receptor subunit beta C 04052 Cytokines and neuropeptides [BR:ppa04052] D PAS_chr1-4_0674 hypothetical protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein) C 04515 Cell adhesion molecules C 04090 CD molecules [BR:ppa04090] D PAS_chr2-1_0050 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of A-factor, catalyze K05658 ABCB1; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] D PAS_chr3_0858 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of A-factor K05658 ABCB1; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] D PAS_chr3_0935 Putative ATP-dependent permease of the ABC transporter family of proteins K05681 ABCG2; ATP-binding cassette, subfamily G (WHITE), member 2 C 01504 Antimicrobial resistance genes C 00535 Proteoglycans [BR:ppa00535] D PAS_chr2-2_0306 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells K06669 SMC3; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) C 00536 Glycosaminoglycan binding proteins [BR:ppa00536] D PAS_chr4_0603 Acidic protein of the mitochondrial matrix involved in oxidative phosphorylation K15414 C1QBP; complement component 1 Q subcomponent-binding protein, mitochondrial D PAS_chr2-1_0828 hypothetical protein K09554 CDC37; cell division cycle protein 37 C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ppa00537] D PAS_chr2-2_0084 Repressible alkaline phosphatase, a glycoprotein localized to the vacuole K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAS_chr4_0816 Neutral trehalase, degrades trehalose K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D PAS_chr1-4_0242 Putative mannosidase, GPI-anchored membrane protein K08257 E3.2.1.101; mannan endo-1,6-alpha-mannosidase [EC:3.2.1.101] D PAS_chr1-1_0147 Putative mannosidase, essential glycosylphosphatidylinositol (GPI)-anchored membrane protein K08257 E3.2.1.101; mannan endo-1,6-alpha-mannosidase [EC:3.2.1.101] D PAS_chr4_0584 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor K06009 YPS1_2; yapsin 1/2 [EC:3.4.23.41] D PAS_chr1-3_0226 Beta-1,3-glucanosyltransferase, required for cell wall assembly K22832 GAS1; 1,3-beta-glucanosyltransferase GAS1 [EC:2.4.1.-] D PAS_chr1-3_0227 Beta-1,3-glucanosyltransferase, required for cell wall assembly K22832 GAS1; 1,3-beta-glucanosyltransferase GAS1 [EC:2.4.1.-] C 04091 Lectins [BR:ppa04091] D PAS_chr4_0432 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles K10080 LMAN1; lectin, mannose-binding 1 D PAS_chr2-2_0178 hypothetical protein K10082 LMAN2; lectin, mannose-binding 2 D PAS_chr3_0179 Glucosidase II beta subunit K08288 PRKCSH; protein kinase C substrate 80K-H D PAS_chr2-1_0322 Calnexin K08054 CANX; calnexin C 04990 Domain-containing proteins not elsewhere classified [BR:ppa04990] D PAS_chr1-1_0170 N-myristoylated calcium-binding protein that may have a role in intracellular signaling K19932 NCS1; neuronal calcium sensor D PAS_chr1-4_0379 Penta-EF-hand protein K23905 PEF1; peflin D PAS_chr3_0990 Nexin-1 homolog required for localizing membrane proteins K17917 SNX1_2; sorting nexin-1/2 D PAS_chr3_0639 Sorting nexin K17918 SNX3_12; sorting nexin-3/12 D PAS_chr2-1_0389 Sorting nexin K17919 SNX4; sorting nexin-4 D PAS_chr3_0269 Protein required for sorting proteins to the vacuole K17922 SNX8; sorting nexin-8 D PAS_chr3_0532 Intermediate filament protein K17887 SNX25; sorting nexin-25 D PAS_chr2-2_0030 Sorting nexin family member K21996 SNX41_42; sorting nexin-41/42 D PAS_chr3_1139 Sorting nexin K21996 SNX41_42; sorting nexin-41/42 D PAS_chr1-3_0207 Essential protein involved in assembly of cytosolic and nuclear iron-sulfur proteins K24730 CIAO1; cytosolic iron-sulfur protein assembly protein CIAO1 D PAS_chr1-4_0641 Actin-interacting protein K24736 WDR1; WD repeat-containing protein 1 (actin-interacting protein 1) D PAS_chr1-1_0145 Cytoplasmic protein with a role in regulation of Ty1 transposition K24737 WDR6; WD repeat-containing protein 6 D PAS_chr2-2_0400 WD repeat-containing protein K24750 WDR55; WD repeat-containing protein 55 D PAS_chr2-2_0189 Putative protein of unknown function with similarity to proteins containing WD-40 domains K24758 WDR89; WD repeat-containing protein 89 D PAS_chr1-4_0348 hypothetical protein K24935 TTC27; tetratricopeptide repeat protein 27 B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PAS_chr1-4_0058 Mitochondrial protein with similarity to flavoprotein-type oxidoreductases K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D PAS_chr4_0806 NADP-cytochrome P450 reductase K00327 POR; NADPH-ferrihemoprotein reductase [EC:1.6.2.4] D PAS_chr2-1_0333 Zeta-crystallin homolog, found in the cytoplasm and nucleus K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D PAS_chr3_1184 hypothetical protein K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D PAS_chr3_0377 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D PAS_chr3_0338 Flavin-linked sulfhydryl oxidase localized to the endoplasmic reticulum lumen K17891 ERV2; FAD-linked sulfhydryl oxidase [EC:1.8.3.2] D PAS_chr3_0066 Peptide methionine sulfoxide reductase, reverses the oxidation of methionine residues K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D PAS_chr4_0843 Putative protein-methionine-R-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D PAS_chr2-1_0008 Putative protein-methionine-R-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D PAS_chr2-1_0315 Omega class glutathione transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D PAS_chr2-1_0236 Sulfiredoxin, contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups I K12260 SRX1; sulfiredoxin [EC:1.8.98.2] D PAS_chr2-2_0127 Mitochondrial cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D PAS_chr2-1_0115 Mitochondrial cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D PAS_chr1-1_0155 Nuclear thiol peroxidase, functions as an alkyl-hydroperoxide reductase during post-diauxic growth K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PAS_chr2-2_0382 Thiol peroxidase that functions as a hydroperoxide receptor K23856 GPX; peroxiredoxin [EC:1.11.1.24] D PAS_chr1-4_0145 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D PAS_chr3_0332 hypothetical protein K23516 XAN1; xanthine dioxygenase [EC:1.14.11.48] D PAS_chr2-1_0014 Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase, involved in sulfonate catabolism for use K19245 JLP1; sulfonate dioxygenase [EC:1.14.11.-] D PAS_chr2-1_0198 Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase, involved in sulfonate catabolism for use K19245 JLP1; sulfonate dioxygenase [EC:1.14.11.-] D PAS_chr4_0243 hypothetical protein K24029 OGFOD1; prolyl 3-hydroxylase /prolyl 3,4-dihydroxylase [EC:1.14.11.-] D PAS_chr1-4_0188 Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D PAS_chr3_0535 Sphingolipid alpha-hydroxylase K19703 FA2H; 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase [EC:1.14.18.6] D PAS_chr2-1_0365 Putative protein of unknown function K24121 MPO1; 2-hydroxy fatty acid dioxygenase [EC:1.14.18.12] D PAS_chr1-1_0013 hypothetical protein K13076 SLD; sphingolipid 8-(E)-desaturase [EC:1.14.19.18] D PAS_chr2-1_0553 Deoxyhypusine hydroxylase, a HEAT-repeat containing metalloenzyme that catalyses hypusine formation K06072 DOHH; deoxyhypusine monooxygenase [EC:1.14.99.29] D PAS_chr3_0330 Trans-aconitate methyltransferase K22438 TMT1; trans-aconitate 3-methyltransferase [EC:2.1.1.145] D PAS_chr2-1_0815 hypothetical protein K22438 TMT1; trans-aconitate 3-methyltransferase [EC:2.1.1.145] D PAS_chr1-4_0630 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family K16219 NTMT1; protein N-terminal methyltransferase [EC:2.1.1.244] D PAS_chr4_0465 hypothetical protein K20238 E2.1.1.317; sphingolipid C9-methyltransferase [EC:2.1.1.317] D PAS_chr3_1025 N-myristoyl transferase K00671 NMT; glycylpeptide N-tetradecanoyltransferase [EC:2.3.1.97] D PAS_chr3_0246 Palmitoyltransferase with autoacylation activity K18932 ZDHHC; palmitoyltransferase [EC:2.3.1.225] D PAS_c121_0010 hypothetical protein K18932 ZDHHC; palmitoyltransferase [EC:2.3.1.225] D PAS_chr1-3_0218 Probable catalytic subunit of a mannosylinositol phosphorylceramide (MIPC) synthase K22721 CSG1; inositol phosphorylceramide mannosyltransferase catalytic subunit [EC:2.4.1.370] D PAS_chr1-3_0211 Deoxyhypusine synthase, catalyzes formation of deoxyhypusine K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D PAS_chr1-4_0124 Mitochondrial NADH kinase, phosphorylates NADH K19386 POS5; NADH kinase [EC:2.7.1.86] D PAS_chr2-2_0330 Phosphatidylinositol:ceramide phosphoinositol transferase (IPC synthase) K22723 AUR1; inositol phosphorylceramide synthase catalytic subunit [EC:2.7.1.227] D PAS_chr3_0735 Inositolphosphotransferase 1, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C) K22725 IPT1; mannosyl-inositol-phosphoceramide inositolphosphotransferase [EC:2.7.1.228] D PAS_chr1-3_0160 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D PAS_chr2-1_0801 Serine/threonine protein kinase that inhibits pheromone induced signalling downstream of MAPK K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr1-4_0375 Putative protein kinase that, when overexpressed, interferes with pheromone-induced growth arrest K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr1-4_0273 Serine/threonine protein kinase K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr3_0940 Ser-Thr protein kinase, member (with Ark1p and Prk1p) of the Ark kinase family K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr4_0076 One of two (see also PSK1) PAS domain containing S/T protein kinases K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr3_0195 Serine/threonine protein kinase K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr3_0791 Protein kinase of the PAK/Ste20 kinase family K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr2-2_0038 Putative serine/threonine protein kinase K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr2-2_0459 hypothetical protein K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr4_0260 Nonessential putative serine/threonine protein kinase of unknown cellular role K08286 E2.7.11.-; protein-serine/threonine kinase [EC:2.7.11.-] D PAS_chr1-1_0051 hypothetical protein K08287 E2.7.12.1; dual-specificity kinase [EC:2.7.12.1] D PAS_chr4_0922 hypothetical protein K23978 IAH1; isoamyl acetate esterase [EC:3.1.1.112] D PAS_chr4_0039 Meiosis-specific protein with similarity to phospholipase B K13357 SPO1; putative meiotic phospholipase SPO1 [EC:3.1.1.-] D PAS_chr2-2_0177 Putative protein of unknown function K22315 SHB17; sedoheptulose-bisphosphatase [EC:3.1.3.37] D PAS_chr3_0729 Phosphotyrosine-specific protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D PAS_chr2-1_0016 2-deoxyglucose-6-phosphate phosphatase, similar to Dog2p, member of a family of low molecular weight K01111 E3.1.3.68; 2-deoxyglucose-6-phosphatase [EC:3.1.3.68] D PAS_chr2-1_0070 Phosphatase that is highly specific for ADP-ribose 1''-phosphate, a tRNA splicing metabolite K15529 POA1; ADP-ribose 1''-phosphate phosphatase [EC:3.1.3.84] D PAS_chr1-4_0123 hypothetical protein K23114 ARMT1; damage-control phosphatase, subfamily III [EC:3.1.3.-] D PAS_chr2-2_0215 3'-->5' exonuclease and endonuclease with a possible role in apoptosis K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PAS_chr1-1_0130 Daughter cell-specific secreted protein with similarity to glucanases, endo-1,3-beta-glucanase K01180 E3.2.1.6; endo-1,3(4)-beta-glucanase [EC:3.2.1.6] D PAS_chr4_0048 Intracellular beta-1,3-endoglucanase, expression is induced during sporulation K01180 E3.2.1.6; endo-1,3(4)-beta-glucanase [EC:3.2.1.6] D PAS_chr1-1_0355 glycosyl hydrolase family 88, putative K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D PAS_chr3_0891 Alpha mannosidase-like protein of the endoplasmic reticulum required for degradation of glycoprotein K23979 MNL1; endoplasmic reticulum Man8GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.210] D PAS_chr2-2_0064 Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p) that may participate in DNA replication K01238 SUN; SUN family beta-glucosidase [EC:3.2.1.-] D PAS_chr4_0046 Mitochondrial outer membrane and cell wall localized SUN family member K01238 SUN; SUN family beta-glucosidase [EC:3.2.1.-] D PAS_chr2-2_0070 Nit protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D PAS_chr1-4_0408 Amidase, removes the amide group from N-terminal asparagine and glutamine residues K14663 NTA1; protein N-terminal amidase [EC:3.5.1.-] D PAS_chr1-4_0017 Vacuolar endopolyphosphatase with a role in phosphate metabolism K06018 PPN1; endopolyphosphatase [EC:3.6.1.10] D PAS_chr4_0021 Guanosine diphosphatase located in the Golgi K01526 E3.6.1.42; guanosine-diphosphatase [EC:3.6.1.42] D PAS_chr3_0281 Polyphosphate phosphatase K07766 E3.6.1.52; diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52] D PAS_chr3_0578 Peroxisomal nudix pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function K27537 PCD1; 2-hydroxy-dATP diphosphatase / coenzyme A diphosphatase [EC:3.6.1.55 3.6.1.77] D PAS_chr2-1_0401 Protein that localizes to chromatin and has a role in regulation of histone gene expression K22531 ATAD2; ATPase family AAA domain-containing protein 2 [EC:3.6.1.-] D PAS_chr3_1123 Protein with similarity to mammalian developmentally regulated GTP-binding protein K06944 DRG; developmentally-regulated GTP-binding protein [EC:3.6.5.-] D PAS_chr1-1_0253 Member of the DRG family of GTP-binding proteins K06944 DRG; developmentally-regulated GTP-binding protein [EC:3.6.5.-] D PAS_chr4_0738 Putative protein of unknown function K17757 CARKD; ATP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.93] D PAS_chr4_0044 hypothetical protein K18195 RGL4; rhamnogalacturonan endolyase [EC:4.2.2.23] D PAS_chr3_0976 Putative protein of unknown function K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6] D PAS_chr1-3_0264 Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin) K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D PAS_chr1-1_0428 P-type ATPase sodium pump, involved in Na+ and Li+ efflux to allow salt tolerance K01536 ENA; P-type Na+/K+ transporter [EC:7.2.2.3 7.2.2.-] D PAS_chr1-4_0325 High affinity Ca2+/Mn2+ P-type ATPase required for Ca2+ and Mn2+ transport into Golgi K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D PAS_chr1-1_0117 Calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D PAS_FragD_0019 Putative protein of unknown function K13526 ATP13A2; cation-transporting P-type ATPase 13A2 [EC:7.2.2.-] D PAS_chr1-4_0233 Putative aminophospholipid translocase (flippase) involved in endocytosis and vacuolar biogenesis K01530 E7.6.2.1; phospholipid-translocating ATPase [EC:7.6.2.1] D PAS_chr2-1_0057 Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane K01530 E7.6.2.1; phospholipid-translocating ATPase [EC:7.6.2.1] D PAS_chr2-1_0756 Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane K01530 E7.6.2.1; phospholipid-translocating ATPase [EC:7.6.2.1] D PAS_chr2-1_0807 hypothetical protein K01530 E7.6.2.1; phospholipid-translocating ATPase [EC:7.6.2.1] C 99981 Carbohydrate metabolism D PAS_chr1-4_0236 Pho85p cyclin of the Pho80p subfamily, forms a functional kinase complex with Pho85p K24113 PCL6_7; PHO85 cyclin-6/7 C 99982 Energy metabolism D PAS_chr4_0939 hypothetical protein K03521 fixA; electron transfer flavoprotein beta subunit D PAS_chr4_0953 hypothetical protein K23490 CYB5; cytochrome b5 D PAS_chr1-4_0672 hypothetical protein K23490 CYB5; cytochrome b5 C 99983 Lipid metabolism D PAS_chr3_0113 Component of the inositol phosphorylceramide synthase K22724 KEI1; inositol phosphorylceramide synthase regulatory subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D PAS_chr1-4_0397 Probable glutamine amidotransferase K18802 DUG3; glutamine amidotransferase D PAS_chr2-1_0497 Single-domain racemase, possibly non-specific due to the lack of the second domain K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D PAS_chr3_0725 Protein with a role in ubiquinone (Coenzyme Q) biosynthesis K18586 COQ4; ubiquinone biosynthesis protein COQ4 D PAS_chr1-4_0406 Protein required for ubiquinone (coenzyme Q) biosynthesis and respiratory growth K18587 COQ9; ubiquinone biosynthesis protein COQ9 D PAS_chr3_0270 Coenzyme Q (ubiquinone) binding protein K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D PAS_chr2-1_0183 Acyl-protein thioesterase responsible for depalmitoylation of Gpa1p K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D PAS_chr4_0720 Transcriptional coactivator K03627 MBF1; putative transcription factor D PAS_chr2-1_0726 hypothetical protein K18667 ASCC2; activating signal cointegrator complex subunit 2 D PAS_chr1-4_0288 hypothetical protein K21627 IFH1; protein IFH1 C 99974 Translation D PAS_chr2-2_0278 Protein with an apparent role in acetylation of N-terminal methionine residues K20815 NAT2; N-terminal acetyltransferase 2 C 99975 Protein processing C 99976 Replication and repair D PAS_chr2-2_0287 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome K07478 ycaJ; putative ATPase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PAS_chr2-1_0649 Acetate transporter required for normal sporulation K03293 TC.AAT; amino acid transporter, AAT family D PAS_chr3_0649 Transporter of thiamine or related compound K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PAS_chr3_0022 Allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PAS_chr1-3_0059 Uracil permease, localized to the plasma membrane K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PAS_FragB_0002 Protein CSF1 K24965 CSF1; protein CSF1 C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D PAS_chr1-4_0300 hypothetical protein K22746 CIAPIN1; anamorsin D PAS_chr4_0726 Putative protein of unknown function K24205 TMBIM; protein lifeguard D PAS_chr2-2_0358 Protein of unknown function required for establishment of sister chromatid cohesion K26403 CIAO2; cytosolic iron-sulfur assembly component 2 D PAS_chr2-1_0305 Nuclear architecture related protein K26404 CIAO3; cytosolic iron-sulfur assembly component 3 C 99992 Structural proteins D PAS_chr2-1_0887 hypothetical protein K26550 PIR; cell wall mannoprotein D PAS_chr4_0305 O-glycosylated protein required for cell wall stability K26550 PIR; cell wall mannoprotein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D PAS_chr3_0080 Putative DNA helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein C 99997 Function unknown D PAS_chr4_0605 Putative protein of unknown function K06867 K06867; uncharacterized protein D PAS_chr1-4_0137 hypothetical protein K06867 K06867; uncharacterized protein D PAS_FragD_0002 ER membrane protein involved in regulation of OLE1 transcription, acts with homolog Spt23p K06867 K06867; uncharacterized protein D PAS_chr2-1_0171 Putative protein of unknown function K06867 K06867; uncharacterized protein D PAS_chr4_0086 Putative acyltransferase with similarity to Eeb1p and Eht1p K07019 K07019; uncharacterized protein D PAS_chr1-1_0419 Acyl-coenzymeA:ethanol O-acyltransferase K07019 K07019; uncharacterized protein D PAS_chr2-1_0874 hypothetical protein K07034 K07034; uncharacterized protein D PAS_chr1-1_0158 Putative transmembrane protein involved in export of ammonia, a starvation signal K07034 K07034; uncharacterized protein D PAS_chr1-1_0378 Putative transmembrane protein involved in export of ammonia K07034 K07034; uncharacterized protein D PAS_chr1-1_0417 Putative transmembrane protein involved in export of ammonia K07034 K07034; uncharacterized protein D PAS_chr1-1_0418 Acetate transporter required for normal sporulation K07034 K07034; uncharacterized protein D PAS_chr2-1_0640 Putative protein of unknown function K07078 K07078; uncharacterized protein D PAS_chr2-1_0681 Xanthine-guanine phosphoribosyl transferase K07101 K07101; uncharacterized protein D PAS_chr1-4_0086 hypothetical protein K07112 K07112; uncharacterized protein D PAS_chr1-3_0037 Defining member of the SET3 histone deacetylase complex K07117 K07117; uncharacterized protein D PAS_chr2-1_0261 Activator of Chs3p (chitin synthase III), recruits Chs3p to the bud neck via interaction with Bni4p K07126 K07126; uncharacterized protein D PAS_chr2-1_0318 hypothetical protein K07140 K07140; MOSC domain-containing protein D PAS_chr1-4_0267 hypothetical protein K09117 K09117; uncharacterized protein D PAS_chr3_1005 hypothetical protein K09704 K09704; uncharacterized protein D PAS_chr3_0105 hypothetical protein K09780 K09780; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 25, 2024