+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Aciduliprofundum boonei

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D Aboo_0109 Pre-mRNA processing ribonucleoprotein, binding domain protein K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs D Aboo_1151 RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase C Kinase C Other 90S particles D Aboo_0915 Suppressor Mra1 family protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D Aboo_1281 KH domain protein K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases D Aboo_1280 RIO-like kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D Aboo_1227 Adenylate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D Aboo_0355 Protein of unknown function DUF367 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] C Other pre-40S particles D Aboo_0399 ABC transporter related protein K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases D Aboo_0093 small GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein C RNases D RNase MRP E Aboo_1513 Ribonuclease P, Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] C Kinases C Export and cytoplasmic maturation factors D Aboo_0028 translation initiation factor eIF-6 K03264 EIF6; translation initiation factor 6 D Aboo_1149 NMD3 family protein K07562 NMD3; 60S ribosomal export protein NMD3 D Aboo_0184 Ribosome maturation protein SBDS-like protein K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D Aboo_0405 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Aboo_1075 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles B Other ribosome biogenesis factors # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D Aboo_0109 Pre-mRNA processing ribonucleoprotein, binding domain protein K14564 NOP56; nucleolar protein 56 D Aboo_0150 fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D Aboo_1236 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D Aboo_1151 RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors C Aboo_1087 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D Aboo_0759 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Aboo_0069 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] C 23S rRNA modification factors D Aboo_1329 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Aboo_1132 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Aboo_1288 Radical SAM domain protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] B ribosomal protein modification factors C Aboo_1292 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] B rRNA processing factors B rRNA helicases C Aboo_0501 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C Aboo_1550 GTP-binding proten HflX K03665 hflX; GTPase B Other maturation factors C Aboo_0755 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C Aboo_1523 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein C Aboo_0538 GTPase of unknown function domain protein K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024