+F Repair protein KO
#
DNA Repair and Recombination Proteins - Acropora digitifera (stony coral)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 107357152 DNA oxidative demethylase ALKBH2-like K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 107338407 activating signal cointegrator 1 complex subunit 3-like K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 107342618 deoxyribodipyrimidine photo-lyase-like K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D 107353424 deoxyribodipyrimidine photo-lyase-like K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 107334956 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107358105 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107358636 G/T mismatch-specific thymine DNA glycosylase-like K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E 107349925 G/T mismatch-specific thymine DNA glycosylase-like K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E 107330346 DNA-3-methyladenine glycosylase-like K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 107355008 single-strand selective monofunctional uracil DNA glycosylase-like K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
E 107355118 adenine DNA glycosylase-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 107355138 adenine DNA glycosylase-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 107343416 methyl-CpG-binding domain protein 4-like K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 107336194 methyl-CpG-binding domain protein 4-like K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 107345521 N-glycosylase/DNA lyase-like K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 107354658 endonuclease 8-like 1 K10567 NEIL1; endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 107341267 DNA-(apurinic or apyrimidinic site) lyase-like K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E 107345614 probable endonuclease 4 K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E 107345852 DNA-(apurinic or apyrimidinic site) lyase 2-like K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 107346148 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 107341449 DNA polymerase delta subunit 2-like K02328 POLD2; DNA polymerase delta subunit 2
F 107330591 DNA polymerase delta subunit 2-like K02328 POLD2; DNA polymerase delta subunit 2
F 107335253 DNA polymerase delta subunit 3-like K03504 POLD3; DNA polymerase delta subunit 3
F 107334507 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 107338241 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 107349220 DNA polymerase epsilon subunit 2-like K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 107332979 DNA polymerase epsilon subunit 3-like K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F 107348451 DNA polymerase epsilon subunit 4-like K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E 107350006 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 107352736 flap endonuclease 1-like K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Short Patch-BER factors
E 107328246 DNA polymerase beta-like K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
E 107328896 DNA repair protein XRCC1-like K10803 XRCC1; DNA-repair protein XRCC1
E 107332074 DNA ligase 3-like K10776 LIG3; DNA ligase 3 [EC:6.5.1.1]
E 107353214 DNA ligase 3-like K10776 LIG3; DNA ligase 3 [EC:6.5.1.1]
D Other BER factors
E 107337570 tyrosyl-DNA phosphodiesterase 1-like K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 107356877 aprataxin and PNK-like factor K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
E 107336894 polynucleotide 3'-phosphatase ZDP-like K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 107331921 DNA polymerase lambda-like K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 107331924 DNA polymerase lambda-like K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 107342604 poly [ADP-ribose] polymerase 1-like K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 107335566 poly [ADP-ribose] polymerase 4-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 107329781 poly [ADP-ribose] polymerase 4-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 107342192 poly [ADP-ribose] polymerase 2-A-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 107358784 poly [ADP-ribose] polymerase 2-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 107353703 DNA repair protein complementing XP-C cells homolog K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 107358263 DNA repair protein complementing XP-C cells homolog K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 107335160 UV excision repair protein RAD23 homolog A-like K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 107349974 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107352081 cullin-4A-like K10609 CUL4; cullin 4
F 107347188 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 107336064 DNA-directed RNA polymerase II subunit RPB1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 107349326 DNA-directed RNA polymerase II subunit RPB2-like K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 107334371 DNA-directed RNA polymerase II subunit RPB3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 107333898 DNA-directed RNA polymerase II subunit RPB4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 107357185 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 107338177 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 107330708 DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 107341034 DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 107353390 DNA-directed RNA polymerase II subunit RPB9-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 107333688 DNA-directed RNA polymerase II subunit RPB11-a-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F 107349974 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107352081 cullin-4A-like K10609 CUL4; cullin 4
F 107347188 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 107336365 DNA excision repair protein ERCC-8-like K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 107345923 DNA excision repair protein ERCC-6-like K10841 ERCC6; DNA excision repair protein ERCC-6
F 107337670 UV-stimulated scaffold protein A-like K23720 UVSSA; UV-stimulated scaffold protein A
F 107353388 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 107356604 TFIIH basal transcription factor complex helicase XPB subunit-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 107353139 TFIIH basal transcription factor complex helicase XPB subunit-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 107337467 general transcription factor IIH subunit 1-like K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 107343083 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 107340339 general transcription factor IIH subunit 3-like K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 107335447 general transcription factor IIH subunit 4-like K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 107344135 cyclin-dependent kinase 7-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 107347281 cyclin-H-like K06634 CCNH; cyclin H
E 107358168 CDK-activating kinase assembly factor MAT1-like K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 107334494 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 107332804 replication protein A 32 kDa subunit-A-like K10739 RFA2; replication factor A2
E 107327631 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Other NER factors
E 107333704 DNA repair protein complementing XP-A cells homolog K10847 XPA; DNA-repair protein complementing XP-A cells
E 107354867 uncharacterized LOC107354867 K10847 XPA; DNA-repair protein complementing XP-A cells
E 107332046 DNA excision repair protein ERCC-1-like K10849 ERCC1; DNA excision repair protein ERCC-1
E 107335174 DNA repair endonuclease XPF-like K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 107333121 DNA repair protein complementing XP-G cells homolog K10846 ERCC5; DNA excision repair protein ERCC-5
E 107347809 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 107337921 cullin-3-like K03869 CUL3; cullin 3
E 107348020 cullin-5-like K10612 CUL5; cullin 5
E 107347765 transcription elongation factor B polypeptide 2-like K03873 ELOB; elongin-B
E 107354311 transcription elongation factor B polypeptide 3-like K15076 ELOA; elongin-A
E 107344110 ubiquitin-associated protein 2-like K26545 UBAP2; ubiquitin-associated protein 2
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 107351410 DNA mismatch repair protein Msh2-like K08735 MSH2; DNA mismatch repair protein MSH2
E 107334329 DNA mismatch repair protein Msh3-like K08736 MSH3; DNA mismatch repair protein MSH3
E 107336223 DNA mismatch repair protein Msh6-like K08737 MSH6; DNA mismatch repair protein MSH6
E 107358065 DNA mismatch repair protein Msh6-like K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 107347810 DNA mismatch repair protein Mlh1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 107358104 mismatch repair endonuclease PMS2-like K10858 PMS2; DNA mismatch repair protein PMS2
E 107346583 DNA mismatch repair protein Mlh3-like K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 107346148 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 107341449 DNA polymerase delta subunit 2-like K02328 POLD2; DNA polymerase delta subunit 2
E 107330591 DNA polymerase delta subunit 2-like K02328 POLD2; DNA polymerase delta subunit 2
E 107335253 DNA polymerase delta subunit 3-like K03504 POLD3; DNA polymerase delta subunit 3
E 107334507 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 107334494 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 107332804 replication protein A 32 kDa subunit-A-like K10739 RFA2; replication factor A2
E 107327631 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 107344085 replication factor C subunit 1-like K10754 RFC1; replication factor C subunit 1
E 107332606 replication factor C subunit 4-like K10755 RFC2_4; replication factor C subunit 2/4
E 107348729 replication factor C subunit 2-like K10755 RFC2_4; replication factor C subunit 2/4
E 107344478 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
E 107339497 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
E 107357411 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
E 107332751 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 107350006 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 107333198 exonuclease 1-like K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 107346615 exonuclease 1-like K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 107336988 WD repeat-containing protein 76-like K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 107338377 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 107337273 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 107356748 nibrin-like K10867 NBN; nibrin
D BRCA1-core complex
D BRCA1-A complex
E 107327979 BRISC and BRCA1-A complex member 1-like K20776 BABAM; BRISC and BRCA1-A complex member 1
E 107353093 BRISC and BRCA1-A complex member 1-like K20776 BABAM; BRISC and BRCA1-A complex member 1
E 107334026 BRCA1-A complex subunit BRE-like K12173 BRE; BRCA1-A complex subunit BRE
D BRCA1-B complex
E 107341491 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 107333032 DNA topoisomerase 2-binding protein 1-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 107331486 uncharacterized LOC107331486 K20773 RBBP8; DNA endonuclease RBBP8 [EC:3.1.-.-]
E 107338377 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 107337273 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 107356748 nibrin-like K10867 NBN; nibrin
D BRCA complex
E 107348661 breast cancer type 2 susceptibility protein-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 107354576 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 107354576 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
E 107342872 DNA repair protein RAD51 homolog 2-like K10869 RAD51L1; RAD51-like protein 1
E 107351517 DNA repair protein RAD51 homolog 3-like K10870 RAD51L2; RAD51-like protein 2
E 107330100 DNA repair protein RAD51 homolog 4-like K10871 RAD51L3; RAD51-like protein 3
E 107345270 DNA repair protein XRCC2-like K10879 XRCC2; DNA-repair protein XRCC2
D Rad52 family proteins
E 107336565 DNA repair protein RAD52 homolog K10873 RAD52; DNA repair and recombination protein RAD52
E 107344744 RAD52 motif-containing protein 1-like K10874 RDM1; RAD52 motif-containing protein 1
D Rad54 family proteins
E 107346899 DNA repair and recombination protein RAD54-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107340112 helicase ARIP4-like K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
E 107334462 DNA repair and recombination protein RAD54B-like K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E 107349568 ATP-dependent DNA helicase Q1-like K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 107349569 ATP-dependent DNA helicase Q1-like K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 107339846 Werner syndrome ATP-dependent helicase-like K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 107343144 Bloom syndrome protein homolog K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107358001 ATP-dependent DNA helicase Q4-like K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 107343144 Bloom syndrome protein homolog K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107332980 DNA topoisomerase 3-beta-1-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107346896 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107347956 uncharacterized LOC107347956 K10990 RMI1; RecQ-mediated genome instability protein 1
E 107357293 uncharacterized LOC107357293 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 107334494 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 107332804 replication protein A 32 kDa subunit-A-like K10739 RFA2; replication factor A2
E 107327631 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 107347747 serine/threonine-protein phosphatase 4 catalytic subunit-like K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 107353013 serine/threonine-protein phosphatase 4 regulatory subunit 1-like K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E 107330627 uncharacterized LOC107330627 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 107345087 serine/threonine-protein phosphatase 4 regulatory subunit 3-like K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 107341853 serine/threonine-protein phosphatase 4 regulatory subunit 4-like K15426 PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4
D AP-5 complex
E 107348723 AP-5 complex subunit mu-1-like K19023 AP5M1; AP-5 complex subunit mu-1
E 107334640 AP-5 complex subunit sigma-1-like K19024 AP5S1; AP-5 complex subunit sigma-1
E 107350058 AP-5 complex subunit zeta-1-like K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 107350688 structural maintenance of chromosomes protein 5-like K22803 SMC5; structural maintenance of chromosomes protein 5
E 107346356 structural maintenance of chromosomes protein 6-like K22804 SMC6; structural maintenance of chromosomes protein 6
E 107330756 structural maintenance of chromosomes protein 6-like K22804 SMC6; structural maintenance of chromosomes protein 6
E 107337161 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 107337162 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 107345848 melanoma-associated antigen G1-like K22823 NSMCE3; non-structural maintenance of chromosomes element 3
E 107327334 EP300-interacting inhibitor of differentiation 3-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 107348847 exonuclease 3'-5' domain-containing protein 2-like K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 107330735 Werner syndrome ATP-dependent helicase homolog K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 107356323 Werner syndrome ATP-dependent helicase homolog K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 107329907 exonuclease 3'-5' domain-containing protein 2-like K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 107329909 exonuclease 3'-5' domain-containing protein 2-like K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 107348848 exonuclease 3'-5' domain-containing protein 2-like K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 107348849 uncharacterized LOC107348849 K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 107328630 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 107339217 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 107331416 26S proteasome complex subunit DSS1-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 107341544 structure-specific endonuclease subunit slx1-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 107341545 structure-specific endonuclease subunit slx1-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 107348713 uncharacterized LOC107348713 K10484 BTBD12; structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
E 107345449 uncharacterized LOC107345449 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 107354577 zinc finger FYVE domain-containing protein 26-like K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 107346154 RAD51-associated protein 1-like K20778 RAD51AP1; RAD51-associated protein 1
E 107344571 mortality factor 4-like protein 1 K11339 MORF4L1; mortality factor 4-like protein 1
E 107329846 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 107334443 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 107358298 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 107338389 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 107356132 DNA repair-scaffolding protein-like K22806 SPIDR; DNA repair-scaffolding protein
E 107332670 uncharacterized LOC107332670 K23112 BRAT1; BRCA1-associated ATM activator 1
E 107356093 BRCA1-associated ATM activator 1-like K23112 BRAT1; BRCA1-associated ATM activator 1
E 107352554 protein C21orf2 homolog K23456 CFAP410; cilla- and flagella-associated protein
E 107357413 zinc finger SWIM domain-containing protein 7-like K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 107336062 BRCA2-interacting transcriptional repressor EMSY-like K25790 EMSY; BRCA2-interacting transcriptional repressor EMSY
E 107337737 heat shock factor 2-binding protein-like K25791 HSF2BP; heat shock factor 2-binding protein
E 107346362 protein MMS22-like K26125 MMS22L; protein MMS22-like
E 107351762 tonsoku-like protein K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2
E 107341202 PCNA-interacting partner-like K27412 PARPBP; PCNA-interacting partner
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 107332337 X-ray repair cross-complementing protein 6-like K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 107341704 X-ray repair cross-complementing protein 5-like K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
E 107328540 DNA-dependent protein kinase catalytic subunit-like K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
E 107331835 DNA-dependent protein kinase catalytic subunit-like K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
E 107331836 DNA-dependent protein kinase catalytic subunit-like K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
D MRX complex
E 107338377 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 107337273 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 107348354 DNA ligase 4-like K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 107333297 DNA repair protein XRCC4-like K10886 XRCC4; DNA-repair protein XRCC4
E 107335468 non-homologous end-joining factor 1-like K10980 NHEJ1; non-homologous end-joining factor 1
E 107335470 non-homologous end-joining factor 1-like K10980 NHEJ1; non-homologous end-joining factor 1
D X-family DNA polymerases
E 107331921 DNA polymerase lambda-like K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 107331924 DNA polymerase lambda-like K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 107328246 DNA polymerase beta-like K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 107356877 aprataxin and PNK-like factor K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
E 107330196 protein artemis-like K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E 107340734 protein artemis-like K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E 107337186 tyrosyl-DNA phosphodiesterase 2-like K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 107350916 uncharacterized LOC107350916 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 107358564 structural maintenance of chromosomes flexible hinge domain-containing protein 1-like K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
E 107330334 structural maintenance of chromosomes flexible hinge domain-containing protein 1-like K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
E 107341445 structural maintenance of chromosomes flexible hinge domain-containing protein 1-like K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
E 107342949 uncharacterized LOC107342949 K23386 PWWP3; PWWP domain-containing DNA repair factor 3
E 107343287 protein FAM35A-like K26129 SHLD2; shieldin complex subunit 2
E 107357511 uncharacterized LOC107357511 K26130 SHLD3; shieldin complex subunit 3
C FA (Fanconi anemia) pathway
D FA core complex
E 107327709 Fanconi anemia group A protein-like K10888 FANCA; fanconi anemia group A protein
E 107332733 uncharacterized LOC107332733 K10893 FANCF; fanconi anemia group F protein
E 107339204 uncharacterized LOC107339204 K10894 FANCG; fanconi anemia group G protein
E 107354876 E3 ubiquitin-protein ligase FANCL-like K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 107353297 uncharacterized LOC107353297 K10896 FANCM; fanconi anemia group M protein
E 107350394 Fanconi anemia core complex-associated protein 24-like K10898 FAAP24; fanconi anemia-associated protein
E 107343177 uncharacterized LOC107343177 K10993 FAAP100; fanconi anemia core complex 100 kDa subunit
E 107329538 uncharacterized LOC107329538 K10993 FAAP100; fanconi anemia core complex 100 kDa subunit
D FA core complex binding factors
E 107353696 transcription factor HES-4-like K06054 HES1; hairy and enhancer of split 1
E 107342801 transcription factor HES-2-like K06054 HES1; hairy and enhancer of split 1
E 107342802 transcription factor HES-4-like K06054 HES1; hairy and enhancer of split 1
E 107349721 transcription factor HES-1-like K06054 HES1; hairy and enhancer of split 1
E 107349725 transcription factor HES-1-like K06054 HES1; hairy and enhancer of split 1
E 107349741 transcription factor HES-4-like K06054 HES1; hairy and enhancer of split 1
E 107349745 transcription factor HES-1-like K06054 HES1; hairy and enhancer of split 1
E 107340410 centromere protein S-like K11511 APITD1; centromere protein S
E 107340411 centromere protein S-like K11511 APITD1; centromere protein S
E 107351175 centromere protein X-like K15360 STRA13; centromere protein X
E 107355461 centromere protein X-like K15360 STRA13; centromere protein X
E 107344849 ubiquitin-conjugating enzyme E2 T-like K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 107343144 Bloom syndrome protein homolog K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107332980 DNA topoisomerase 3-beta-1-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107346896 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107347956 uncharacterized LOC107347956 K10990 RMI1; RecQ-mediated genome instability protein 1
E 107357293 uncharacterized LOC107357293 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 107337734 Fanconi anemia group I protein-like K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 107348661 breast cancer type 2 susceptibility protein-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 107341491 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 107342965 fanconi-associated nuclease 1-like K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 107342969 fanconi-associated nuclease 1-like K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 107354576 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
E 107351517 DNA repair protein RAD51 homolog 3-like K10870 RAD51L2; RAD51-like protein 2
E 107332715 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 107341483 ubiquitin carboxyl-terminal hydrolase 1-like K11832 USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
E 107333530 WD repeat-containing protein 48-like K15361 WDR48; WD repeat-containing protein 48
E 107353263 WD repeat-containing protein 48-like K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 107337047 uncharacterized LOC107337047 K15503 ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
E 107354099 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like K15503 ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
D Ubiquitin ligases
E 107349196 E3 ubiquitin-protein ligase RNF8-like K10667 RNF8; E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
E 107333175 E3 ubiquitin-protein ligase RNF168-like K20779 RNF168; E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
E 107342203 E3 ubiquitin-protein ligase HERC2-like K10595 HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26]
D Others
E 107329709 telomerase Cajal body protein 1-like K23314 WRAP53; telomerase Cajal body protein 1
E 107327043 WD repeat-containing protein 70-like K24752 WDR70; WD repeat-containing protein 70
E 107336988 WD repeat-containing protein 76-like K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 107337429 DNA polymerase eta-like K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 107336018 DNA polymerase iota-like K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D 107356880 DNA polymerase kappa-like K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 107341277 DNA repair protein REV1-like K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 107335573 DNA polymerase zeta catalytic subunit-like K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 107340214 ubiquitin-conjugating enzyme E2 A K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 107330308 E3 ubiquitin-protein ligase RAD18-like K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D 107340144 E3 ubiquitin-protein ligase RAD18-like K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D 107340090 uncharacterized LOC107340090 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 107342970 helicase-like transcription factor K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 107349552 ubiquitin-conjugating enzyme E2 variant 2-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 107346700 ubiquitin-conjugating enzyme E2 N-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 107350006 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 107341202 PCNA-interacting partner-like K27412 PARPBP; PCNA-interacting partner
D 107353156 sprT-like domain-containing protein Spartan K24051 SPRTN; SprT-like domain-contaning protein Spartan
D 107356224 acidic repeat-containing protein-like K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D 107342879 cell cycle checkpoint control protein RAD9B-like K10995 RAD9B; cell cycle checkpoint control protein RAD9B
D 107339513 checkpoint protein HUS1-like K10903 HUS1; HUS1 checkpoint protein
D 107336441 cell cycle checkpoint protein RAD1-like K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 107350851 cell cycle checkpoint protein RAD17-like K06662 HRAD17; cell cycle checkpoint protein
D 107332606 replication factor C subunit 4-like K10755 RFC2_4; replication factor C subunit 2/4
D 107348729 replication factor C subunit 2-like K10755 RFC2_4; replication factor C subunit 2/4
D 107344478 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D 107339497 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
D 107357411 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
D 107332751 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 107336441 cell cycle checkpoint protein RAD1-like K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 107331937 protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 107342367 TIMELESS-interacting protein-like K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D 107354252 TIMELESS-interacting protein-like K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D 107334741 claspin-like K25773 CLSPN; claspin
D 107358179 claspin-like K25773 CLSPN; claspin
C Triple T complex
D 107332715 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 107342074 TELO2-interacting protein 1 homolog K20403 TTI1; TELO2-interacting protein 1
D 107347273 TELO2-interacting protein 2-like K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 107352827 ubiquitin-like protein 4A K23388 UBL4; ubiquitin-like protein 4
D 107339122 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 107357473 serine/threonine-protein kinase ATR-like K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 107357474 serine/threonine-protein kinase ATR-like K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 107358517 serine/threonine-protein kinase ATR-like K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 107331887 uncharacterized LOC107331887 K10905 ATRIP; ATR interacting protein
D 107332199 serine-protein kinase ATM-like K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 107355729 serine/threonine-protein kinase Chk1-like K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D 107336044 serine/threonine-protein kinase Chk1-like K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D 107341547 serine/threonine-protein kinase Chk2-like K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D 107347114 M-phase inducer phosphatase-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 107344330 M-phase inducer phosphatase-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 107336021 14-3-3-like protein K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 107336022 14-3-3 protein theta-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 107340890 14-3-3-like protein 1 K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 107335380 14-3-3 protein epsilon-like K06630 YWHAE; 14-3-3 protein epsilon
D 107335382 14-3-3 protein beta/alpha-1-like K06630 YWHAE; 14-3-3 protein epsilon
D 107335383 14-3-3 protein 1-like K06630 YWHAE; 14-3-3 protein epsilon
D 107335384 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 107357510 uncharacterized LOC107357510 K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
D 107332399 neuron navigator 3-like K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
D 107341647 wee1-like protein kinase 1-A K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 107341169 mediator of DNA damage checkpoint protein 1-like K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 107340251 plastin-3-like K17336 PLS3; plastin-3
D 107351968 serine/threonine-protein kinase Nek4-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107350038 serine/threonine-protein kinase Nek1-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107340974 serine/threonine-protein kinase TIO-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107331938 serine/threonine-protein kinase Nek10-like K20879 NEK10; serine/threonine-protein kinase Nek10 [EC:2.7.11.1]
D 107339577 serine/threonine-protein kinase Nek11-like K20880 NEK11; serine/threonine-protein kinase Nek11 [EC:2.7.11.1]
D 107344959 protein downstream neighbor of son homolog K22422 DONSON; protein downstream neighbor of Son
D 107332056 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 107352202 vacuolar protein sorting-associated protein 4B-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 107340326 abscission/NoCut checkpoint regulator-like K24778 ZFYVE19; abscission/NoCut checkpoint regulator
D 107334085 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D 107335572 DNA polymerase theta-like K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 107353340 myb-binding protein 1A-like protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 107330216 DNA-directed primase/polymerase protein-like K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
D 107350414 DNA-directed primase/polymerase protein-like K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 107329311 three prime repair exonuclease 2-like K10791 TREX2; three prime repair exonuclease 2 [EC:3.1.11.2]
D 107351655 three prime repair exonuclease 2-like K10791 TREX2; three prime repair exonuclease 2 [EC:3.1.11.2]
D 107337729 DNA cross-link repair protein SNM1-like K15340 DCLRE1A; DNA cross-link repair 1A protein
D 107352051 uncharacterized LOC107352051 K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 107336893 exonuclease V-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 107334473 exonuclease V-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 107333478 endonuclease V-like K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 107342160 ankyrin repeat and LEM domain-containing protein 1-like K21411 ANKLE1; ankyrin repeat and LEM domain-containing protein 1
C Helicases
D 107350539 helicase POLQ-like K19178 HELQ; POLQ-like helicase [EC:5.6.2.4]
D 107335487 DNA excision repair protein ERCC-6-like 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 107338007 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 107350466 cell division cycle 5-related protein-like K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 107356827 pre-mRNA-splicing factor SPF27-like K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 107349880 pleiotropic regulator 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 107344118 probable 8-oxo-dGTP diphosphatase NUDT15 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 107332051 7,8-dihydro-8-oxoguanine triphosphatase-like K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56]
D 107345269 8-oxo-dGDP phosphatase NUDT18-like K17817 NUDT18; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D 107357828 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107346621 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 107335754 ribonucleoside-diphosphate reductase subunit M2 B-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 107342618 deoxyribodipyrimidine photo-lyase-like K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D 107353424 deoxyribodipyrimidine photo-lyase-like K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 107334956 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107358105 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107355008 single-strand selective monofunctional uracil DNA glycosylase-like K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
E 107330346 DNA-3-methyladenine glycosylase-like K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 107355118 adenine DNA glycosylase-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 107355138 adenine DNA glycosylase-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 107339320 mediator of RNA polymerase II transcription subunit 34-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107340488 putative ATP-dependent DNA helicase Q1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107334791 mediator of RNA polymerase II transcription subunit 34-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107354161 ATP-dependent DNA helicase RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107357682 mediator of RNA polymerase II transcription subunit 34-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107345321 putative ATP-dependent DNA helicase Q1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107328464 mediator of RNA polymerase II transcription subunit 34-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107337718 putative ATP-dependent DNA helicase Q1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107328293 uncharacterized LOC107328293 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107331892 mediator of RNA polymerase II transcription subunit 34-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107338818 ATP-dependent DNA helicase RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107345999 mediator of RNA polymerase II transcription subunit 34-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 107356549 Werner syndrome ATP-dependent helicase homolog K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 107344118 probable 8-oxo-dGTP diphosphatase NUDT15 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 107357828 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024