+D GENES KO #

  KEGG Orthology (KO) - Anaerococcus prevotii

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:apr00010] D Apre_0894 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Apre_1658 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Apre_0676 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Apre_1588 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Apre_0443 fructose-16-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Apre_0749 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Apre_0767 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Apre_0765 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Apre_0179 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Apre_0768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Apre_0677 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Apre_1243 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Apre_1042 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Apre_1063 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Apre_1065 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_1232 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1584 glycoside hydrolase family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Apre_0153 Beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Apre_0218 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:apr00020] D Apre_1100 Citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Apre_1102 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Apre_1101 Isocitrate dehydrogenase (NAD(+)) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D Apre_0093 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Apre_1042 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Apre_1063 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:apr00030] D Apre_1658 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Apre_0669 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Apre_1616 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Apre_1617 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Apre_0972 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Apre_1538 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Apre_0036 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Apre_1622 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15] D Apre_0037 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Apre_0969 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Apre_1599 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Apre_1598 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Apre_0749 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Apre_0443 fructose-16-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Apre_0676 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Apre_1588 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:apr00040] D Apre_1600 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Apre_1601 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Apre_1602 mannitol dehydrogenase domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D Apre_1256 transcriptional regulator, XRE family K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Apre_0576 Malate/L-lactate dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D Apre_0669 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:apr00051] D Apre_0154 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Apre_0141 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Apre_0873 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Apre_0676 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Apre_1588 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Apre_0443 fructose-16-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Apre_0382 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Apre_0435 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Apre_0749 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Apre_0767 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Apre_0972 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Apre_0383 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Apre_0200 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Apre_0201 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component D Apre_0202 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D Apre_0157 PTS system sorbose subfamily IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] C 00052 Galactose metabolism [PATH:apr00052] D Apre_1672 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Apre_0894 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Apre_1608 glycoside hydrolase family 2 sugar binding K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Apre_0072 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Apre_0237 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Apre_0078 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144] D Apre_0676 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Apre_1588 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Apre_0079 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D Apre_0069 Galactose-6-phosphate isomerase K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26] D Apre_0070 sugar-phosphate isomerase, RpiB/LacA/LacB family K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26] D Apre_0794 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D Apre_1675 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D Apre_0075 sugar isomerase (SIS) K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism [PATH:apr00053] D Apre_1256 transcriptional regulator, XRE family K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Apre_0576 Malate/L-lactate dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:apr00500] D Apre_1540 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Apre_0794 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D Apre_0241 Sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D Apre_1591 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Apre_1586 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D Apre_1585 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D Apre_1583 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component D Apre_1584 glycoside hydrolase family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Apre_0153 Beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Apre_0868 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Apre_0869 glycogen biosynthesis protein K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Apre_0870 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Apre_1280 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Apre_0205 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Apre_0788 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Apre_0414 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Apre_0871 Phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Apre_0872 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D Apre_1537 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1] D Apre_0413 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Apre_0218 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Apre_0453 PTS system, alpha-glucoside-specific IIBC subunit K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Apre_0454 glycoside hydrolase family 4 K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D Apre_0473 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D Apre_0474 alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D Apre_0894 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Apre_1658 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Apre_0154 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:apr00520] D Apre_0218 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Apre_0083 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D Apre_0077 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Apre_1656 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Apre_0154 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Apre_0021 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Apre_1152 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Apre_0970 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Apre_1541 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D Apre_0757 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Apre_0671 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Apre_0894 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Apre_1256 transcriptional regulator, XRE family K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Apre_1672 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Apre_0200 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Apre_0201 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component D Apre_0202 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D Apre_1658 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Apre_0141 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Apre_0873 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Apre_0868 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Apre_0869 glycogen biosynthesis protein K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:apr00620] D Apre_1042 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Apre_1063 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Apre_0655 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Apre_1724 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Apre_0677 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Apre_0986 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1357 D-lactate dehydrogenase (cytochrome) K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436] D Apre_1065 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_1232 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_0364 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Apre_0912 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Apre_1605 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1] D Apre_0229 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Apre_0093 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Apre_1243 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:apr00630] D Apre_1100 Citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Apre_1102 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Apre_0115 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Apre_0546 Catalase K03781 katE; catalase [EC:1.11.1.6] D Apre_0156 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Apre_1157 Haloacid dehalogenase domain protein hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Apre_0442 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Apre_0915 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Apre_0055 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Apre_1599 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:apr00640] D Apre_0655 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Apre_1724 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Apre_1356 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Apre_1065 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_1232 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:apr00650] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Apre_1352 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Apre_1169 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1176 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1353 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D Apre_1356 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Apre_0115 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Apre_0114 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D Apre_0113 hypothetical protein K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE D Apre_1042 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Apre_1063 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism [PATH:apr00562] D Apre_0199 oxidoreductase domain protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] D Apre_0767 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:apr00190] D Apre_1087 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Apre_1086 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Apre_1085 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Apre_1686 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Apre_1011 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Apre_1685 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Apre_1010 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Apre_1688 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Apre_1017 hypothetical protein K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Apre_1684 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Apre_1009 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Apre_1689 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Apre_1012 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Apre_1687 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Apre_1692 Late embryogenesis abundant protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Apre_1691 Sodium-transporting two-sector ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Apre_1015 H(+)-transporting two-sector ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Apre_1690 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Apre_1014 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Apre_0395 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D Apre_0494 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:apr00680] D Apre_0915 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Apre_0768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Apre_0749 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Apre_0443 fructose-16-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D Apre_0676 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Apre_1588 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Apre_0655 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Apre_1724 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Apre_0179 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:apr00910] D Apre_0529 Nitrite reductase (cytochrome; ammonia-forming) K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D Apre_0219 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Apre_0188 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Apre_0442 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Apre_0550 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Apre_0029 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D Apre_1429 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:apr00920] D Apre_0526 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Apre_0527 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Apre_0528 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Apre_0611 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Apre_0954 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Apre_0955 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Apre_0280 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:apr00061] D Apre_0658 phosphopantetheine-binding K02078 acpP; acyl carrier protein D Apre_0544 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00062 Fatty acid elongation [PATH:apr00062] D Apre_1169 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1176 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00071 Fatty acid degradation [PATH:apr00071] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Apre_1169 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1176 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1356 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:apr00561] D Apre_0055 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1080 dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D Apre_1081 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D Apre_1082 PTS system fructose subfamily IIA component K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D Apre_1491 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Apre_0657 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Apre_0917 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Apre_1020 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Apre_0330 protein of unknown function UPF0054 K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Apre_0159 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Apre_0160 glycosyl transferase group 1 K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208] D Apre_0072 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Apre_0237 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:apr00564] D Apre_0918 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Apre_1490 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Apre_0293 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Apre_0917 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Apre_1020 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Apre_0330 protein of unknown function UPF0054 K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Apre_0060 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Apre_0595 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Apre_0617 CDP-diacylglycerol/glycerol-3-phosphate3-phosphatidyl transferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Apre_0429 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:apr00600] D Apre_1608 glycoside hydrolase family 2 sugar binding K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Apre_0072 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Apre_0237 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D Apre_0206 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:apr00230] D Apre_1026 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Apre_0037 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Apre_0969 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Apre_1110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Apre_1109 formyl transferase domain protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Apre_1107 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Apre_1104 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Apre_1105 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Apre_1103 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Apre_1108 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Apre_1004 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Apre_0971 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Apre_0623 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Apre_1106 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Apre_0898 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Apre_0380 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D Apre_1424 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D Apre_1423 molybdopterin dehydrogenase FAD-binding K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D Apre_1422 (2Fe-2S)-binding domain protein K13480 ygeU; xanthine dehydrogenase iron-sulfur-binding subunit D Apre_0337 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Apre_0962 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Apre_1700 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Apre_1696 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Apre_1001 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Apre_0910 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Apre_0493 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Apre_0779 adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D Apre_1553 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Apre_0727 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Apre_0725 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Apre_0726 urease, beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D Apre_0029 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D Apre_1429 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:apr00240] D Apre_0780 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Apre_0781 aspartate transcarbamylase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Apre_0782 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Apre_0785 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Apre_0784 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Apre_0786 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Apre_0783 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Apre_0646 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Apre_1071 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Apre_1021 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Apre_1281 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Apre_0756 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Apre_0039 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Apre_0331 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Apre_1112 Amidohydrolase 3 K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Apre_1001 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Apre_1700 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Apre_1696 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Apre_0433 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Apre_1128 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Apre_0946 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Apre_1047 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Apre_0772 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Apre_0357 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Apre_1430 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:apr00250] D Apre_1444 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Apre_1404 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Apre_0092 fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Apre_0487 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Apre_0488 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Apre_0780 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Apre_0781 aspartate transcarbamylase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Apre_0550 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Apre_0188 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Apre_0442 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Apre_0305 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Apre_0021 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Apre_1110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:apr00260] D Apre_0300 aromatic amino acid beta-eliminating lyase/threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Apre_0915 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Apre_0055 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Apre_0179 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Apre_0097 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Apre_0098 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Apre_1062 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] C 00270 Cysteine and methionine metabolism [PATH:apr00270] D Apre_0954 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Apre_0955 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Apre_1624 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Apre_0177 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Apre_0977 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Apre_1502 aminotransferase class I and II K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Apre_1057 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Apre_1823 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Apre_0280 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Apre_0281 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Apre_0135 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Apre_1065 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_1232 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_0097 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Apre_0098 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:apr00280] D Apre_1356 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Apre_1169 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1176 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis D Apre_1062 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] C 00300 Lysine biosynthesis [PATH:apr00300] D Apre_1506 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Apre_0436 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:apr00310] D Apre_1169 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1176 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:apr00220] D Apre_0031 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Apre_0041 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Apre_0487 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Apre_0488 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Apre_0727 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Apre_0725 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Apre_0726 urease, beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D Apre_0258 Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D Apre_0305 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Apre_0442 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Apre_0188 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Apre_0029 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D Apre_1429 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00330 Arginine and proline metabolism [PATH:apr00330] D Apre_1112 Amidohydrolase 3 K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Apre_1006 Arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_0536 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] C 00340 Histidine metabolism [PATH:apr00340] D Apre_0378 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism D Apre_1502 aminotransferase class I and II K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00360 Phenylalanine metabolism [PATH:apr00360] D Apre_1352 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Apre_1502 aminotransferase class I and II K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00380 Tryptophan metabolism [PATH:apr00380] D Apre_1169 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1176 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_0546 Catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:apr00400] D Apre_1502 aminotransferase class I and II K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:apr00410] D Apre_0118 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_0117 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Apre_0357 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Apre_1430 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Apre_1356 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:apr00430] D Apre_1404 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Apre_0188 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Apre_1724 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Apre_0655 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:apr00440] D Apre_0404 PHP domain protein K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57] C 00450 Selenocompound metabolism [PATH:apr00450] D Apre_1624 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Apre_1637 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Apre_0764 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Apre_1720 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Apre_1428 selenate reductase YgfK K12527 ygfK; putative selenate reductase [EC:1.97.1.9] D Apre_0368 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Apre_1512 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:apr00460] D Apre_1591 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Apre_1444 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Apre_0915 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:apr00470] D Apre_0975 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Apre_0437 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Apre_0305 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Apre_0492 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Apre_1204 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] C 00480 Glutathione metabolism [PATH:apr00480] D Apre_0135 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Apre_0316 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Apre_0888 hypothetical protein K01270 pepD; dipeptidase D [EC:3.4.13.-] D Apre_0282 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:apr00511] D Apre_1608 glycoside hydrolase family 2 sugar binding K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Apre_0149 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:apr00541] D Apre_1672 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Apre_1256 transcriptional regulator, XRE family K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Apre_0509 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Apre_0141 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Apre_0873 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Apre_0970 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:apr00550] D Apre_0757 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Apre_0671 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Apre_0973 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Apre_1204 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Apre_1506 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Apre_0437 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Apre_0436 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Apre_0594 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Apre_0234 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Apre_1205 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Apre_1203 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Apre_1213 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Apre_1315 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Apre_0876 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Apre_1285 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Apre_0139 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Apre_1543 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Apre_0495 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Apre_0985 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Apre_0984 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Apre_0286 Methicillin resistance protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] C 00552 Teichoic acid biosynthesis [PATH:apr00552] D Apre_0234 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Apre_1005 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Apre_1275 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Apre_0189 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Apre_0159 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:apr00543] D Apre_0954 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:apr00730] D Apre_1114 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Apre_1397 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Apre_1633 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Apre_0565 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_0924 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_0925 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Apre_0273 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Apre_1631 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Apre_1632 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D Apre_1629 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Apre_1628 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Apre_0668 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Apre_0410 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Apre_1553 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:apr00740] D Apre_1159 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Apre_1161 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Apre_1158 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Apre_1160 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Apre_0613 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Apre_1629 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Apre_1026 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:apr00750] D Apre_0428 pyridoxal/pyridoxine/pyridoxamine kinase-like protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D Apre_0049 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:apr00760] D Apre_0155 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Apre_0971 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Apre_0931 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Apre_0507 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Apre_1478 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Apre_0877 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:apr00770] D Apre_0105 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Apre_0117 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Apre_0625 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Apre_0578 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Apre_0960 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Apre_1037 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Apre_1329 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Apre_1762 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Apre_0357 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Apre_1430 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Apre_0118 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:apr00780] D Apre_0544 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Apre_0271 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:apr00790] D Apre_1626 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Apre_1051 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Apre_1159 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Apre_1440 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Apre_1439 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Apre_1436 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Apre_0360 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] C 00670 One carbon pool by folate [PATH:apr00670] D Apre_1626 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Apre_1111 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Apre_1131 tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Apre_0915 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Apre_1109 formyl transferase domain protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Apre_1108 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Apre_0663 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Apre_0772 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Apre_1253 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:apr00900] D Apre_0175 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Apre_0491 4-diphosphocytidyl-2C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Apre_0176 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Apre_0597 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Apre_1019 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Apre_0190 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Apre_1029 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Apre_0594 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation D Apre_1169 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1176 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Apre_1616 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D Apre_0509 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:apr01053] D Apre_1763 AMP-dependent synthetase and ligase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D Apre_1764 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:apr00946] D Apre_1591 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Apre_0567 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:apr00521] D Apre_0894 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Apre_0509 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Apre_0894 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D Apre_1502 aminotransferase class I and II K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D Apre_0544 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Apre_0658 phosphopantetheine-binding K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:apr00999] D Apre_0177 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Apre_1591 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:apr00362] D Apre_1352 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D Apre_0986 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:apr00625] D Apre_0503 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1153 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1244 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Apre_1070 HAD-superfamily hydrolase, subfamily IA, variant 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D Apre_1070 HAD-superfamily hydrolase, subfamily IA, variant 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D Apre_0727 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Apre_0725 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Apre_0726 urease, beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00930 Caprolactam degradation D Apre_1169 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Apre_1176 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:apr03020] D Apre_0446 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Apre_0447 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Apre_1547 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Apre_0961 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D Apre_0995 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:apr03010] D Apre_1019 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Apre_0957 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Apre_1568 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Apre_1548 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Apre_1557 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Apre_0483 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Apre_0458 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Apre_1560 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Apre_1394 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Apre_1575 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Apre_1549 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Apre_0457 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Apre_1550 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Apre_1561 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Apre_0614 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Apre_1303 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Apre_1565 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Apre_0485 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Apre_1570 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Apre_1184 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Apre_1162 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Apre_1146 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Apre_1571 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Apre_1574 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Apre_1573 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Apre_1562 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Apre_1559 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Apre_1144 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Apre_0534 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Apre_1145 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Apre_1147 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Apre_1395 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Apre_1564 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Apre_1555 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Apre_1567 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Apre_1546 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Apre_1558 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Apre_1299 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Apre_1342 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Apre_0926 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Apre_1569 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Apre_1572 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Apre_1563 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Apre_1129 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Apre_0928 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Apre_0670 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Apre_1566 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Apre_1556 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Apre_0751 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Apre_0656 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Apre_1150 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Apre_1739 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Apre_1343 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Apre_1551 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Apre_R0031 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:apr00970] D Apre_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Apre_R0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Apre_R0059 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Apre_R0046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Apre_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Apre_R0043 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Apre_R0010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Apre_R0056 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Apre_R0015 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Apre_R0050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Apre_R0061 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Apre_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Apre_R0004 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Apre_R0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Apre_R0052 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Apre_R0053 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Apre_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Apre_R0047 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Apre_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Apre_R0062 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Apre_R0045 tRNA-His K14226 tRNA-His; tRNA His D Apre_R0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Apre_R0032 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Apre_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Apre_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Apre_R0044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Apre_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Apre_R0021 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Apre_R0040 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Apre_R0054 tRNA-Met K14230 tRNA-Met; tRNA Met D Apre_R0027 tRNA-Met K14230 tRNA-Met; tRNA Met D Apre_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met D Apre_R0055 tRNA-Met K14230 tRNA-Met; tRNA Met D Apre_R0024 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Apre_R0063 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Apre_R0064 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Apre_R0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Apre_R0023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Apre_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Apre_R0035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Apre_R0042 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Apre_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Apre_R0049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Apre_R0025 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Apre_R0017 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Apre_R0014 tRNA-Val K14237 tRNA-Val; tRNA Val D Apre_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Apre_1646 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Apre_0979 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Apre_0978 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Apre_0980 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Apre_0936 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Apre_0913 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Apre_1198 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Apre_0334 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Apre_0335 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Apre_1664 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Apre_0581 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Apre_1645 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Apre_1512 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Apre_0663 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Apre_1241 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Apre_1197 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Apre_0284 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Apre_0628 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Apre_1335 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Apre_0748 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Apre_1363 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Apre_1340 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Apre_1339 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Apre_1514 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Apre_1247 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:apr03060] D Apre_1554 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Apre_1149 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Apre_0769 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Apre_0908 YajC family protein K03210 yajC; preprotein translocase subunit YajC D Apre_1736 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Apre_1249 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Apre_1304 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Apre_R0036 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Apre_0958 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Apre_0354 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Apre_1183 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Apre_0921 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:apr04122] D Apre_0565 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_0924 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_0566 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Apre_1440 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Apre_1439 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Apre_1436 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Apre_0925 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Apre_1634 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Apre_1633 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:apr03018] D Apre_0768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Apre_0615 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Apre_0770 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Apre_1083 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Apre_1413 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Apre_0750 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Apre_0953 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Apre_0941 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Apre_0676 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Apre_1166 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Apre_1500 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Apre_0494 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:apr03030] D Apre_0675 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Apre_0598 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Apre_0790 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Apre_1126 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Apre_1185 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Apre_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Apre_0535 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Apre_1136 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Apre_0484 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0811 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_1292 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Apre_1330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Apre_0981 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:apr03410] D Apre_1385 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Apre_0761 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Apre_0922 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Apre_0235 methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Apre_0582 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Apre_1330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Apre_0909 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Apre_0981 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:apr03420] D Apre_0967 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Apre_1406 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Apre_1407 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Apre_1044 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Apre_1496 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_1050 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_0682 superfamily I DNA and RNA helicase-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_0982 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_1330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Apre_0981 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Apre_0995 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:apr03430] D Apre_0948 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Apre_1336 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Apre_0949 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Apre_1496 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_1050 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_0682 superfamily I DNA and RNA helicase-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_0982 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_1031 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Apre_1030 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Apre_0909 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Apre_0484 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0811 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0675 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Apre_0598 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Apre_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Apre_0790 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Apre_1185 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Apre_1126 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Apre_0981 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:apr03440] D Apre_0909 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Apre_0484 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0811 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Apre_0333 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Apre_0792 recombination protein RecR K06187 recR; recombination protein RecR D Apre_0618 recA protein K03553 recA; recombination protein RecA D Apre_1330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Apre_0904 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Apre_0905 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Apre_0903 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Apre_1039 helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Apre_0758 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Apre_0675 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Apre_0598 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Apre_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Apre_0790 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Apre_1185 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Apre_1126 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Apre_0959 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:apr02010] D Apre_0526 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Apre_0527 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Apre_0528 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Apre_1443 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Apre_1442 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Apre_1441 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Apre_0051 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Apre_0052 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Apre_0053 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Apre_1226 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Apre_1227 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Apre_1228 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Apre_1229 ABC transporter related K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Apre_1671 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0242 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0133 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0142 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0252 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0128 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Apre_0129 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Apre_0131 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Apre_0132 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Apre_0238 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Apre_0239 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Apre_0240 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Apre_0146 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Apre_0147 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Apre_0144 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Apre_0145 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Apre_1667 binding-protein-dependent transport systems inner membrane component K10201 ngcF; N-acetylglucosamine transport system permease protein D Apre_1668 binding-protein-dependent transport systems inner membrane component K10202 ngcG; N-acetylglucosamine transport system permease protein D Apre_0295 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Apre_0297 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Apre_0298 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Apre_0296 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Apre_1618 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Apre_1619 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein D Apre_1620 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Apre_1621 RbsD or FucU transport K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D Apre_0061 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Apre_0062 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Apre_0063 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Apre_0064 ABC transporter related K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Apre_1379 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein D Apre_1378 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Apre_1377 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Apre_1376 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Apre_0489 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Apre_0490 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Apre_1532 polar amino acid ABC transporter, inner membrane subunit K17073 lysX1; putative lysine transport system substrate-binding protein D Apre_1533 ABC transporter related K17076 lysY; putative lysine transport system ATP-binding protein D Apre_0276 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Apre_0277 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Apre_0275 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Apre_0274 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein D Apre_0469 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Apre_0465 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Apre_0466 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Apre_0467 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Apre_0468 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Apre_1771 extracellular solute-binding protein family 5 K15584 nikA; nickel transport system substrate-binding protein D Apre_0689 extracellular solute-binding protein family 5 K15584 nikA; nickel transport system substrate-binding protein D Apre_0685 binding-protein-dependent transport systems inner membrane component K15585 nikB; nickel transport system permease protein D Apre_0686 binding-protein-dependent transport systems inner membrane component K15586 nikC; nickel transport system permease protein D Apre_1769 ABC transporter related K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D Apre_0687 ABC transporter related K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D Apre_0688 ABC transporter related K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D Apre_0461 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Apre_0499 YodA domain protein K09815 znuA; zinc transport system substrate-binding protein D Apre_0500 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Apre_0516 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Apre_0518 ABC-3 protein K09816 znuB; zinc transport system permease protein D Apre_0463 ABC-3 protein K09816 znuB; zinc transport system permease protein D Apre_0502 ABC-3 protein K09816 znuB; zinc transport system permease protein D Apre_0462 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Apre_0501 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Apre_0517 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Apre_0701 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D Apre_0703 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein D Apre_0704 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein D Apre_0702 ABC transporter related K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D Apre_1417 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Apre_1419 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Apre_1418 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Apre_0641 hypothetical protein K20460 nukE; lantibiotic transport system permease protein D Apre_0640 conserved hypothetical protein K20461 nukG; lantibiotic transport system permease protein D Apre_0642 ABC transporter related K20459 nukF; lantibiotic transport system ATP-binding protein D Apre_1090 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Apre_1091 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Apre_0432 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein D Apre_0431 ABC transporter related K16921 ytrB; acetoin utilization transport system ATP-binding protein D Apre_0690 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Apre_0707 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Apre_1773 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Apre_0691 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Apre_0708 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Apre_1774 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Apre_0418 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Apre_0417 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:apr02060] D Apre_0883 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Apre_0882 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Apre_1641 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Apre_0218 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Apre_0083 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D Apre_1540 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Apre_0453 PTS system, alpha-glucoside-specific IIBC subunit K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Apre_0473 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D Apre_1586 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D Apre_1585 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D Apre_1583 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component D Apre_0200 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Apre_0201 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component D Apre_0202 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D Apre_0157 PTS system sorbose subfamily IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D Apre_1675 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D Apre_0383 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Apre_0382 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Apre_0435 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:apr03070] D Apre_1149 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Apre_0769 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Apre_1554 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Apre_0908 YajC family protein K03210 yajC; preprotein translocase subunit YajC D Apre_1736 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Apre_1249 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Apre_0958 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Apre_1304 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Apre_1805 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:apr02020] D Apre_1373 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Apre_1374 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Apre_1379 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein D Apre_1306 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Apre_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Apre_1090 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Apre_1091 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Apre_1092 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Apre_1093 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Apre_1066 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D Apre_1834 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Apre_1833 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Apre_0495 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Apre_0180 putative two component transcriptional regulator, winged helix family K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D Apre_1840 ABC transporter related K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT D Apre_0229 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Apre_1851 hypothetical protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK D Apre_1520 signal transduction histidine kinase-like protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK D Apre_1848 hypothetical protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK D Apre_1849 two component transcriptional regulator, LuxR family K14989 salR; two-component system, NarL family, secretion system response regulator SalR D Apre_1519 two component transcriptional regulator, LuxR family K14989 salR; two-component system, NarL family, secretion system response regulator SalR D Apre_1852 two component transcriptional regulator, LuxR family K14989 salR; two-component system, NarL family, secretion system response regulator SalR D Apre_0442 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Apre_0649 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Apre_0305 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:apr02024] D Apre_1161 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Apre_0469 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Apre_0465 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Apre_0466 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Apre_0467 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Apre_0468 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Apre_0015 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Apre_0387 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Apre_0014 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Apre_0016 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Apre_0388 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Apre_1767 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Apre_0389 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Apre_1768 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Apre_0017 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Apre_0018 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Apre_0390 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Apre_1770 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein D Apre_0079 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D Apre_1736 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Apre_1149 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Apre_0769 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Apre_1554 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Apre_0908 YajC family protein K03210 yajC; preprotein translocase subunit YajC D Apre_1249 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Apre_0958 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Apre_1304 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Apre_1840 ABC transporter related K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT D Apre_0180 putative two component transcriptional regulator, winged helix family K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D Apre_1618 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly D Apre_1135 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Apre_1642 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Apre_0768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:apr01501] D Apre_0469 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Apre_0465 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Apre_0466 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Apre_0467 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Apre_0468 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Apre_0567 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Apre_1074 transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D Apre_1213 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Apre_1315 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:apr01502] D Apre_1834 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Apre_1833 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Apre_0437 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Apre_0975 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Apre_0436 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Apre_1205 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Apre_1203 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Apre_0495 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:apr01503] D Apre_1306 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Apre_1066 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:apr01000] C 01001 Protein kinases [BR:apr01001] D Apre_0667 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Apre_0008 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Apre_1471 putative signal transduction histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Apre_0541 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Apre_1373 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Apre_1092 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Apre_1834 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Apre_1851 hypothetical protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK D Apre_1520 signal transduction histidine kinase-like protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK D Apre_1848 hypothetical protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK C 01009 Protein phosphatases and associated proteins [BR:apr01009] D Apre_0676 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Apre_0401 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Apre_0666 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:apr01002] D Apre_0921 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Apre_0650 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Apre_0140 Bleomycin hydrolase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D Apre_1235 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D Apre_0337 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Apre_1072 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Apre_1816 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Apre_1110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Apre_0021 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Apre_1052 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D Apre_0292 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D Apre_1484 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Apre_1485 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Apre_1486 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Apre_1386 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71] D Apre_1659 Abortive infection protein K07052 K07052; CAAX protease family protein D Apre_1730 Abortive infection protein K07052 K07052; CAAX protease family protein D Apre_0058 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Apre_0495 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Apre_0197 Peptidase M16C associated domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D Apre_1069 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Apre_0945 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Apre_0316 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Apre_0888 hypothetical protein K01270 pepD; dipeptidase D [EC:3.4.13.-] D Apre_1048 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Apre_1045 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Apre_1649 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Apre_1717 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Apre_0109 peptidase M42 family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-] D Apre_0596 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Apre_1306 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Apre_1285 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Apre_0139 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Apre_1543 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Apre_0374 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Apre_0376 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Apre_0797 transcriptional regulator, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88] D Apre_1183 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Apre_0266 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Apre_1702 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D Apre_0056 Rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D Apre_0943 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Apre_1337 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:apr01003] D Apre_0159 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Apre_0160 glycosyl transferase group 1 K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208] D Apre_0870 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Apre_1213 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:apr01005] D Apre_1493 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:apr01011] D Apre_0757 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Apre_0671 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Apre_0973 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Apre_1204 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Apre_1506 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Apre_0437 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Apre_0286 Methicillin resistance protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D Apre_0975 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Apre_0492 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Apre_1205 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Apre_1203 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Apre_0234 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Apre_1273 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Apre_1370 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Apre_1274 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Apre_1213 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Apre_1315 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Apre_0876 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Apre_1285 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Apre_0139 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Apre_1543 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Apre_0495 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Apre_1816 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Apre_1484 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Apre_1485 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Apre_1486 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Apre_1386 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71] D Apre_1328 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:apr01004] D Apre_0544 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Apre_0206 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Apre_1764 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D Apre_0657 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Apre_0917 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Apre_1020 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:apr01008] D Apre_1764 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D Apre_1763 AMP-dependent synthetase and ligase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] C 01006 Prenyltransferases [BR:apr01006] D Apre_1029 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Apre_0594 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Apre_0950 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:apr01007] D Apre_1646 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Apre_1514 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Apre_1247 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Apre_1645 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Apre_1335 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Apre_1512 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Apre_0284 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Apre_1241 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Apre_1197 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Apre_0628 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Apre_0913 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Apre_1198 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Apre_1363 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Apre_0334 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Apre_0335 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Apre_0581 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Apre_0748 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Apre_1664 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Apre_0936 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Apre_1340 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Apre_1339 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Apre_1502 aminotransferase class I and II K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Apre_1624 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:apr03000] D Apre_1823 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Apre_1790 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Apre_1798 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Apre_0345 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Apre_0035 transcriptional regulator, DeoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D Apre_0073 transcriptional regulator, DeoR family K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D Apre_0381 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Apre_1623 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Apre_1384 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Apre_0881 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Apre_0111 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D Apre_0076 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D Apre_1074 transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D Apre_1718 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Apre_0515 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Apre_0940 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Apre_1143 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Apre_0935 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Apre_0352 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Apre_1408 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Apre_1495 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Apre_0705 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Apre_1760 transcriptional regulator, MarR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Apre_0230 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D Apre_1468 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Apre_1830 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Apre_0737 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Apre_0591 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Apre_1655 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Apre_1587 PTS modulated transcriptional regulator, MtlR family K03491 licR; probable licABCH operon transcriptional regulator D Apre_0988 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Apre_1727 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Apre_0830 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Apre_0173 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Apre_1492 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator D Apre_1028 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Apre_1168 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Apre_0124 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D Apre_1200 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Apre_1208 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:apr03021] D Apre_0995 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Apre_1547 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Apre_0446 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Apre_0447 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Apre_0961 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Apre_1135 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Apre_1642 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor D Apre_0009 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03090 sigB; RNA polymerase sigma-B factor D Apre_0607 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Apre_1032 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Apre_1148 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Apre_1539 protein serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Apre_0007 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Apre_0008 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Apre_1471 putative signal transduction histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Apre_0914 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Apre_0627 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Apre_0750 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:apr03019] D Apre_1313 ribonuclease G and E-like protein K08301 rng; ribonuclease G [EC:3.1.26.-] D Apre_0659 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Apre_0941 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Apre_0953 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Apre_0770 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Apre_1483 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D Apre_1083 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Apre_1413 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Apre_0768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Apre_0615 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Apre_0750 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Apre_0676 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Apre_1166 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Apre_1500 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Apre_0494 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Apre_0672 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:apr03011] D Apre_1019 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Apre_0957 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Apre_1568 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Apre_1548 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Apre_1557 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Apre_0483 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Apre_0458 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Apre_1560 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Apre_1394 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Apre_1575 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Apre_1549 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Apre_0457 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Apre_1550 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Apre_1561 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Apre_0614 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Apre_1303 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Apre_1565 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Apre_0485 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Apre_1570 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Apre_1184 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Apre_1162 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Apre_1146 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Apre_1571 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Apre_1574 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Apre_1573 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Apre_1562 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Apre_1559 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Apre_0534 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Apre_1145 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Apre_1147 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Apre_1144 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Apre_1395 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Apre_1564 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Apre_1555 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Apre_1567 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Apre_1546 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Apre_1558 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Apre_1299 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Apre_1342 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Apre_0926 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Apre_1569 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Apre_1572 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Apre_1563 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Apre_0928 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Apre_0670 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Apre_1566 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Apre_1556 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Apre_0751 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Apre_0656 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Apre_1150 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Apre_1739 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Apre_1343 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Apre_1551 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Apre_1129 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Apre_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0031 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:apr03009] D Apre_0659 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Apre_0332 GTP-binding protein Era K03595 era; GTPase D Apre_0929 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Apre_0607 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Apre_1032 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Apre_1148 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Apre_1494 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Apre_1509 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Apre_0664 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Apre_1038 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Apre_1731 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Apre_1207 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Apre_1155 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Apre_1644 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Apre_0291 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Apre_0665 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Apre_0823 Fe-S-cluster redox enzyme-like protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Apre_0678 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Apre_0994 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Apre_1023 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Apre_0893 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Apre_0583 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Apre_0878 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Apre_0184 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Apre_1301 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Apre_1313 ribonuclease G and E-like protein K08301 rng; ribonuclease G [EC:3.1.26.-] D Apre_0938 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Apre_1083 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Apre_0668 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Apre_0916 small GTP-binding protein K03977 engA; GTPase D Apre_1293 GTP-binding protein HSR1-related K14540 rbgA; ribosome biogenesis GTPase A D Apre_1212 GTP-binding proten HflX K03665 hflX; GTPase D Apre_0755 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Apre_0910 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Apre_0610 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Apre_0606 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Apre_0003 S4 domain-containing protein K14761 rlbA; ribosome-associated protein D Apre_0933 iojap-like protein K09710 ybeB; ribosome-associated protein D Apre_0930 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Apre_1250 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Apre_1046 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:apr03016] D Apre_1483 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D Apre_0372 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Apre_0748 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Apre_0284 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Apre_1197 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Apre_1512 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Apre_1335 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Apre_0628 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Apre_0913 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Apre_0936 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Apre_1198 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Apre_1664 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Apre_0581 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Apre_1645 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Apre_1241 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Apre_1363 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Apre_1340 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Apre_1339 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Apre_1514 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Apre_1247 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Apre_0911 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Apre_1163 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Apre_1055 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Apre_1416 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Apre_0612 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Apre_0565 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_0924 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_0755 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Apre_0950 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Apre_1733 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Apre_1732 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Apre_0368 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Apre_1738 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Apre_R0041 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Apre_0334 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Apre_0335 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Apre_1646 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Apre_1348 YbaK/prolyl-tRNA synthetase associated region K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Apre_1284 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Apre_0626 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Apre_1018 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Apre_1164 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Apre_1300 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Apre_1134 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Apre_0763 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Apre_1154 methyltransferase small K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Apre_1341 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Apre_0566 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Apre_0233 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Apre_0906 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Apre_1393 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Apre_0907 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Apre_0925 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Apre_0622 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Apre_0183 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Apre_0185 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Apre_0182 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Apre_1035 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Apre_0770 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Apre_0615 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:apr03012] D Apre_0609 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Apre_1344 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Apre_1467 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Apre_0956 translation elongation factor Ts K02357 tsf; elongation factor Ts D Apre_0460 translation elongation factor Tu K02358 tuf; elongation factor Tu D Apre_1140 translation elongation factor Tu K02358 tuf; elongation factor Tu D Apre_0459 translation elongation factor G K02355 fusA; elongation factor G D Apre_0204 small GTP-binding protein K02355 fusA; elongation factor G D Apre_0753 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Apre_0647 ribosome recycling factor K02838 frr; ribosome recycling factor D Apre_0752 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Apre_0968 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Apre_1552 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Apre_1034 translation elongation factor P K02356 efp; elongation factor P D Apre_1248 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:apr03110] D Apre_1002 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Apre_0030 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Apre_0127 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Apre_0375 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Apre_0401 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Apre_1166 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Apre_1500 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Apre_1165 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Apre_1003 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Apre_1167 GrpE protein K03687 GRPE; molecular chaperone GrpE D Apre_1501 chaperonin Cpn10 K04078 groES; chaperonin GroES D Apre_1306 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Apre_1717 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Apre_0441 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Apre_0966 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Apre_0887 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Apre_1721 thioredoxin domain protein K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:apr04131] D Apre_0354 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Apre_0149 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D Apre_0765 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Apre_0179 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Apre_0677 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Apre_0401 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:apr04121] C 03051 Proteasome [BR:apr03051] D Apre_0401 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:apr03032] D Apre_1823 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Apre_0964 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Apre_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Apre_0535 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Apre_0538 Chromosomal replication initiator DnaA K02315 dnaC; DNA replication protein DnaC D Apre_0809 AAA ATPase K02315 dnaC; DNA replication protein DnaC D Apre_1802 AAA ATPase K02315 dnaC; DNA replication protein DnaC D Apre_1136 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Apre_0484 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0811 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0675 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Apre_0598 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Apre_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Apre_1185 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Apre_1126 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Apre_0790 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Apre_1292 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Apre_1330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Apre_0981 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Apre_0006 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Apre_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Apre_1289 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Apre_1822 DNA topoisomerase type IA central domain protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:apr03036] D Apre_1823 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Apre_0659 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Apre_0964 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Apre_1003 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Apre_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Apre_0661 SMC domain protein K03529 smc; chromosome segregation protein D Apre_1025 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Apre_1024 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Apre_0616 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Apre_1202 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Apre_1201 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Apre_1338 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Apre_0919 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF D Apre_0178 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Apre_1318 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Apre_1317 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Apre_1316 hypothetical protein K03571 mreD; rod shape-determining protein MreD D Apre_0760 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Apre_1728 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Apre_1727 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Apre_0830 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Apre_1732 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Apre_1731 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Apre_0952 integrase family protein K04763 xerD; integrase/recombinase XerD D Apre_0377 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein D Apre_0674 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:apr03400] D Apre_0134 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Apre_0922 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Apre_1385 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Apre_0761 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Apre_0995 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Apre_0285 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Apre_0946 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Apre_0235 methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Apre_0582 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Apre_0909 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Apre_0981 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Apre_1330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Apre_1406 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Apre_1407 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Apre_1044 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Apre_1496 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_1050 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_0682 superfamily I DNA and RNA helicase-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_0982 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Apre_0446 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Apre_0447 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Apre_1547 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Apre_0961 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Apre_0967 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Apre_0948 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Apre_1336 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Apre_0949 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Apre_1031 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Apre_1030 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Apre_0675 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Apre_0598 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Apre_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Apre_1185 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Apre_1126 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Apre_0790 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Apre_0484 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0811 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0758 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Apre_0618 recA protein K03553 recA; recombination protein RecA D Apre_0904 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Apre_0905 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Apre_0903 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Apre_0959 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Apre_0521 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Apre_0520 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D Apre_0776 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Apre_0136 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Apre_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Apre_1039 helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Apre_0333 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Apre_0792 recombination protein RecR K06187 recR; recombination protein RecR D Apre_1027 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Apre_0523 UvrD/REP helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Apre_0522 ATP-dependent nuclease subunit B-like protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Apre_0006 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Apre_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Apre_1289 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Apre_0964 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Apre_1413 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Apre_0224 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Apre_0619 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Apre_0797 transcriptional regulator, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88] D Apre_1311 regulatory protein RecX K03565 recX; regulatory protein D Apre_1220 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Apre_1700 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Apre_1696 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Apre_0611 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:apr03029] D Apre_0609 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Apre_1344 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Apre_0956 translation elongation factor Ts K02357 tsf; elongation factor Ts D Apre_0460 translation elongation factor Tu K02358 tuf; elongation factor Tu D Apre_1140 translation elongation factor Tu K02358 tuf; elongation factor Tu D Apre_0459 translation elongation factor G K02355 fusA; elongation factor G D Apre_0204 small GTP-binding protein K02355 fusA; elongation factor G D Apre_0332 GTP-binding protein Era K03595 era; GTPase D Apre_1514 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Apre_1197 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Apre_0913 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Apre_1335 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Apre_0979 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Apre_0978 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Apre_0980 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Apre_0484 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_0811 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Apre_1166 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Apre_1167 GrpE protein K03687 GRPE; molecular chaperone GrpE D Apre_1500 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Apre_1501 chaperonin Cpn10 K04078 groES; chaperonin GroES D Apre_1165 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Apre_0565 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_0924 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_1736 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Apre_0401 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:apr02000] D Apre_0690 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Apre_0707 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Apre_1773 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Apre_0691 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Apre_0708 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Apre_1774 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Apre_1840 ABC transporter related K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT D Apre_0418 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Apre_0417 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Apre_0552 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Apre_1365 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Apre_1366 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Apre_1517 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Apre_1518 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Apre_1188 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Apre_1743 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Apre_1443 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Apre_1442 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Apre_1441 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Apre_0526 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Apre_0527 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Apre_0528 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Apre_0051 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Apre_0052 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Apre_0053 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Apre_1226 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Apre_1227 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Apre_1228 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Apre_1229 ABC transporter related K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Apre_0793 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Apre_1671 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0242 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0133 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0142 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0252 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Apre_0128 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Apre_0129 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Apre_0131 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Apre_0132 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Apre_0238 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Apre_0239 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Apre_0240 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Apre_1667 binding-protein-dependent transport systems inner membrane component K10201 ngcF; N-acetylglucosamine transport system permease protein D Apre_1668 binding-protein-dependent transport systems inner membrane component K10202 ngcG; N-acetylglucosamine transport system permease protein D Apre_0146 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Apre_0147 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Apre_0144 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Apre_0145 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Apre_1618 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Apre_1619 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein D Apre_1620 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Apre_0061 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Apre_0062 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Apre_0063 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Apre_0064 ABC transporter related K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Apre_0295 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Apre_0297 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Apre_0298 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Apre_0296 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Apre_0255 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Apre_0253 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Apre_0254 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Apre_1379 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein D Apre_1378 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Apre_1377 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Apre_1376 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Apre_0489 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Apre_0490 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Apre_0276 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Apre_0277 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Apre_0275 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Apre_0274 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein D Apre_0042 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Apre_0043 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein D Apre_0044 ABC transporter related K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D Apre_1532 polar amino acid ABC transporter, inner membrane subunit K17073 lysX1; putative lysine transport system substrate-binding protein D Apre_1533 ABC transporter related K17076 lysY; putative lysine transport system ATP-binding protein D Apre_0469 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Apre_0465 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Apre_0466 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Apre_0467 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Apre_0468 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Apre_1771 extracellular solute-binding protein family 5 K15584 nikA; nickel transport system substrate-binding protein D Apre_0689 extracellular solute-binding protein family 5 K15584 nikA; nickel transport system substrate-binding protein D Apre_0685 binding-protein-dependent transport systems inner membrane component K15585 nikB; nickel transport system permease protein D Apre_0686 binding-protein-dependent transport systems inner membrane component K15586 nikC; nickel transport system permease protein D Apre_1769 ABC transporter related K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D Apre_0687 ABC transporter related K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D Apre_0688 ABC transporter related K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D Apre_0015 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Apre_0387 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Apre_0014 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Apre_0016 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Apre_0388 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Apre_1767 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Apre_0389 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Apre_1768 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Apre_0017 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Apre_0018 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Apre_0390 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Apre_1770 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein D Apre_0634 periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D Apre_0636 transport system permease protein K25283 yclO; iron-siderophore transport system permease protein D Apre_0635 transport system permease protein K25284 yclN; iron-siderophore transport system permease protein D Apre_0637 ABC transporter related K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D Apre_1708 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Apre_1709 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Apre_1710 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Apre_0461 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Apre_0499 YodA domain protein K09815 znuA; zinc transport system substrate-binding protein D Apre_0500 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Apre_0516 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Apre_0518 ABC-3 protein K09816 znuB; zinc transport system permease protein D Apre_0463 ABC-3 protein K09816 znuB; zinc transport system permease protein D Apre_0502 ABC-3 protein K09816 znuB; zinc transport system permease protein D Apre_0462 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Apre_0501 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Apre_0517 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Apre_0701 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D Apre_0703 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein D Apre_0704 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein D Apre_0702 ABC transporter related K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D Apre_1417 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Apre_1419 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Apre_1418 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Apre_0642 ABC transporter related K20459 nukF; lantibiotic transport system ATP-binding protein D Apre_0641 hypothetical protein K20460 nukE; lantibiotic transport system permease protein D Apre_0640 conserved hypothetical protein K20461 nukG; lantibiotic transport system permease protein D Apre_1307 ABC-2 type transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein D Apre_1308 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein D Apre_1309 ABC transporter related K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D Apre_1090 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Apre_1091 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Apre_0432 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein D Apre_0431 ABC transporter related K16921 ytrB; acetoin utilization transport system ATP-binding protein D Apre_0228 ABC-type Na+ efflux pump permease component-like protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Apre_0408 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Apre_1296 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Apre_0193 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Apre_0192 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_0227 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_0407 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_1480 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_0168 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_0170 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_1297 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_1523 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_1845 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_1835 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Apre_0774 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Apre_0744 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Apre_1756 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Apre_0478 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Apre_0773 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Apre_0287 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Apre_0743 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Apre_1640 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Apre_1535 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 D Apre_0100 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Apre_0427 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Apre_0451 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Apre_0645 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Apre_1662 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Apre_0307 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Apre_0883 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Apre_0882 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Apre_1641 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Apre_0218 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Apre_0083 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D Apre_1540 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Apre_0473 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D Apre_0453 PTS system, alpha-glucoside-specific IIBC subunit K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D Apre_0383 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Apre_1586 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D Apre_1585 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D Apre_1583 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component D Apre_0200 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Apre_0201 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component D Apre_0202 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D Apre_0157 PTS system sorbose subfamily IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D Apre_1675 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D Apre_1082 PTS system fructose subfamily IIA component K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D Apre_0294 MIP family channel protein K02440 glpF; glycerol uptake facilitator D Apre_1120 TrkA-N domain protein K10716 kch; voltage-gated potassium channel D Apre_1647 formate/nitrite transporter K21993 fdhC; formate transporter D Apre_1288 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Apre_0207 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D Apre_0267 magnesium transporter K06213 mgtE; magnesium transporter D Apre_1068 magnesium transporter K06213 mgtE; magnesium transporter D Apre_0106 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Apre_1682 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Apre_0394 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Apre_1358 LrgA family protein K06518 cidA; holin-like protein D Apre_0071 sugar (Glycoside-Pentoside-Hexuronide) transporter K11104 melB; melibiose permease D Apre_0415 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Apre_1078 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Apre_1590 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D Apre_0244 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D Apre_1400 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Apre_1683 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump D Apre_0121 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Apre_1398 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Apre_0122 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Apre_1399 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Apre_0262 uracil-xanthine permease K02824 uraA; uracil permease D Apre_0393 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Apre_0449 Chloride channel core K03281 clcA; chloride channel protein, CIC family D Apre_0103 Chromate transporter K07240 chrA; chromate transporter D Apre_0104 Chromate transporter K07240 chrA; chromate transporter D Apre_1606 Chromate transporter K07240 chrA; chromate transporter D Apre_1607 Chromate transporter K07240 chrA; chromate transporter D Apre_1611 TRAP dicarboxylate transporter, DctM subunit K21393 yiaN; TRAP-type transport system large permease protein D Apre_1612 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein D Apre_1383 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Apre_1613 TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Apre_1734 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D Apre_0354 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Apre_0356 arsenical-resistance protein K03325 ACR3; arsenite transporter D Apre_1273 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Apre_1370 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Apre_1274 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Apre_0320 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Apre_0319 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Apre_0997 hypothetical protein K23675 fmnP; riboflavin transporter D Apre_0181 conserved hypothetical protein K23675 fmnP; riboflavin transporter D Apre_0166 proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter D Apre_0486 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Apre_0541 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Apre_0540 lipopolysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D Apre_1459 FeoA family protein K04758 feoA; ferrous iron transport protein A D Apre_1460 FeoA family protein K04758 feoA; ferrous iron transport protein A D Apre_1458 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:apr02044] D Apre_0650 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Apre_0649 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Apre_0585 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Apre_0934 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Apre_0433 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Apre_1186 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Apre_0759 conserved hypothetical protein K02242 comFC; competence protein ComFC D Apre_0651 methylation site containing protein K02246 comGD; competence protein ComGD D Apre_1805 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D Apre_1249 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Apre_1149 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Apre_0769 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Apre_1554 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Apre_1304 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Apre_0958 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Apre_0908 YajC family protein K03210 yajC; preprotein translocase subunit YajC D Apre_1736 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:apr02042] D Apre_1682 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Apre_0394 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Apre_0558 hypothetical protein K11045 cfa; cAMP factor D Apre_0570 sugar-binding domain protein K11045 cfa; cAMP factor D Apre_0148 Hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 02022 Two-component system [BR:apr02022] D Apre_1373 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Apre_1374 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Apre_1092 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Apre_1093 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Apre_1834 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Apre_1833 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Apre_0180 putative two component transcriptional regulator, winged helix family K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D Apre_0741 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Apre_1851 hypothetical protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK D Apre_1520 signal transduction histidine kinase-like protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK D Apre_1848 hypothetical protein K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK D Apre_1849 two component transcriptional regulator, LuxR family K14989 salR; two-component system, NarL family, secretion system response regulator SalR D Apre_1519 two component transcriptional regulator, LuxR family K14989 salR; two-component system, NarL family, secretion system response regulator SalR D Apre_1852 two component transcriptional regulator, LuxR family K14989 salR; two-component system, NarL family, secretion system response regulator SalR C 02035 Bacterial motility proteins [BR:apr02035] D Apre_0649 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Apre_0585 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Apre_0650 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] C 03037 Cilium and associated proteins [BR:apr03037] D Apre_1535 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 C 04812 Cytoskeleton proteins [BR:apr04812] D Apre_0178 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Apre_1318 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Apre_1201 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Apre_1728 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Apre_1727 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Apre_0830 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:apr04147] D Apre_0401 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Apre_0768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Apre_0765 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Apre_0677 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Apre_1500 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Apre_1166 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Apre_1658 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Apre_1106 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Apre_0460 translation elongation factor Tu K02358 tuf; elongation factor Tu D Apre_1140 translation elongation factor Tu K02358 tuf; elongation factor Tu D Apre_1163 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Apre_1065 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_1232 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Apre_1351 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Apre_1553 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Apre_1004 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Apre_0488 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Apre_0487 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Apre_0357 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Apre_1430 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Apre_1280 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Apre_0205 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Apre_0788 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Apre_1491 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Apre_0442 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Apre_1108 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Apre_0767 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Apre_0179 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:apr02048] D Apre_1823 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Apre_0347 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D Apre_0346 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Apre_0974 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Apre_0588 transcriptional regulator, AbrB family K07172 mazE; antitoxin MazE D Apre_0587 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D Apre_1831 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Apre_0256 hypothetical protein K19165 phd; antitoxin Phd D Apre_1201 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Apre_0178 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Apre_1318 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Apre_0565 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Apre_0924 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:apr04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:apr01504] D Apre_1683 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump D Apre_0567 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Apre_0495 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Apre_1834 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Apre_1833 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Apre_1066 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:apr00536] D Apre_0148 Hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:apr00537] D Apre_0148 Hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:apr03100] D Apre_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Apre_R0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Apre_R0059 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Apre_R0046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Apre_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Apre_R0043 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Apre_R0010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Apre_R0056 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Apre_R0015 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Apre_R0050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Apre_R0061 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Apre_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Apre_R0004 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Apre_R0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Apre_R0052 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Apre_R0053 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Apre_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Apre_R0047 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Apre_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Apre_R0062 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Apre_R0045 tRNA-His K14226 tRNA-His; tRNA His D Apre_R0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Apre_R0032 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Apre_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Apre_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Apre_R0044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Apre_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Apre_R0021 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Apre_R0040 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Apre_R0054 tRNA-Met K14230 tRNA-Met; tRNA Met D Apre_R0027 tRNA-Met K14230 tRNA-Met; tRNA Met D Apre_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met D Apre_R0055 tRNA-Met K14230 tRNA-Met; tRNA Met D Apre_R0024 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Apre_R0063 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Apre_R0064 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Apre_R0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Apre_R0023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Apre_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Apre_R0035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Apre_R0042 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Apre_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Apre_R0049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Apre_R0025 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Apre_R0017 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Apre_R0014 tRNA-Val K14237 tRNA-Val; tRNA Val D Apre_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Apre_R0031 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Apre_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Apre_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Apre_R0036 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Apre_R0041 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Apre_R0038 ssrA; tmRNA as predicted by Rfam (RF00023), score 191.92 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Apre_0047 alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Apre_0556 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Apre_1503 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Apre_1130 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Apre_0452 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Apre_0048 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Apre_1678 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Apre_1362 Desulfoferrodoxin ferrous iron-binding region K05919 dfx; superoxide reductase [EC:1.15.1.2] D Apre_1391 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2] D Apre_0551 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Apre_0355 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Apre_1000 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Apre_1421 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Apre_1515 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D Apre_1669 conserved hypothetical protein K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211] D Apre_1705 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Apre_1209 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Apre_1278 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Apre_1040 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Apre_1242 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Apre_0336 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Apre_1576 protein of unknown function DUF344 K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D Apre_1825 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Apre_0370 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Apre_1269 sugar transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36] D Apre_1043 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Apre_0126 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Apre_0542 Protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Apre_0673 protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Apre_0533 phosphoesterase RecJ domain protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D Apre_1511 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Apre_1510 primase/topoisomerase like protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D Apre_0243 alpha amylase catalytic region K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70] D Apre_1674 coagulation factor 5/8 type domain protein K17624 engCP; endo-alpha-N-acetylgalactosaminidase [EC:3.2.1.97] D Apre_0662 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Apre_0976 carbohydrate kinase, YjeF related protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D Apre_1434 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D Apre_1704 PP-loop domain protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Apre_1706 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Apre_1707 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Apre_0539 carbohydrate kinase, YjeF related protein K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6] D Apre_1326 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Apre_1327 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Apre_1322 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Apre_0561 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Apre_0108 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Apre_1410 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Apre_1325 FMN-binding domain protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Apre_1324 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Apre_1323 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Apre_1636 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins D Apre_1368 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein D Apre_0603 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein D Apre_1456 flavodoxin K03839 fldA; flavodoxin I D Apre_0089 4Fe-4S ferredoxin iron-sulfur binding domain protein K02574 napH; ferredoxin-type protein NapH C 99983 Lipid metabolism D Apre_1346 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism D Apre_0059 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism D Apre_1677 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Apre_1239 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Apre_0747 RNA binding S1 domain protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D Apre_0125 uncharacterized protein with conserved CXXC pairs K19411 mcsA; protein arginine kinase activator D Apre_0373 trigger factor K03545 tig; trigger factor D Apre_0721 UreE urease accessory domain protein K03187 ureE; urease accessory protein D Apre_0722 Urease accessory protein UreF K03188 ureF; urease accessory protein D Apre_0723 urease accessory protein UreG K03189 ureG; urease accessory protein D Apre_0724 Urease accessory protein UreD K03190 ureD; urease accessory protein D Apre_0771 SsrA-binding protein K03664 smpB; SsrA-binding protein D Apre_0584 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Apre_0530 ResB family protein K07399 resB; cytochrome c biogenesis protein D Apre_0361 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor D Apre_0362 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Apre_1536 ribonuclease H K06993 K06993; ribonuclease H-related protein D Apre_1319 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Apre_0681 overcoming lysogenization defect protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Apre_1291 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Apre_1277 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Apre_1312 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Apre_1290 DNA protecting protein DprA K04096 smf; DNA processing protein D Apre_1199 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Apre_1194 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Apre_0729 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Apre_1360 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Apre_0040 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Apre_0251 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase C 99979 Viral proteins C 99998 Others D Apre_1238 Rhodanese domain protein K03972 pspE; phage shock protein E D Apre_0791 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Apre_1592 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Apre_1593 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Apre_1245 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Apre_1246 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Apre_1513 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Apre_0028 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Apre_1695 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Apre_0099 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Apre_1589 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D Apre_1412 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D Apre_0116 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D Apre_1431 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D Apre_0038 Na+ dependent nucleoside transporter domain protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D Apre_1735 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein D Apre_1795 resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Apre_0693 resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Apre_1776 resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D Apre_1470 GTP-binding protein TypA K06207 typA; GTP-binding protein D Apre_0439 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Apre_0329 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D Apre_0563 glycoside hydrolase family 25 K07273 acm; lysozyme C 99994 Others D Apre_1375 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Apre_0379 CutC family protein K06201 cutC; copper homeostasis protein D Apre_0158 hypothetical protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D Apre_1719 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein D Apre_1639 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D Apre_1638 SufBD protein K09015 sufD; Fe-S cluster assembly protein SufD D Apre_1252 ribonuclease BN K07058 K07058; membrane protein D Apre_1283 hypothetical protein K04750 phnB; PhnB protein D Apre_0120 LemA family protein K03744 lemA; LemA protein D Apre_0999 LemA family protein K03744 lemA; LemA protein D Apre_0549 putative membrane protein K01421 yhgE; putative membrane protein D Apre_1697 membrane protein of unknown function K08972 K08972; putative membrane protein D Apre_0011 Cupin 2 conserved barrel domain protein K11312 K11312; cupin 2 domain-containing protein C 99997 Function unknown D Apre_1837 Radical SAM domain protein K06871 K06871; uncharacterized protein D Apre_1008 Radical SAM domain protein K06871 K06871; uncharacterized protein D Apre_1741 Radical SAM domain protein K06871 K06871; uncharacterized protein D Apre_1754 Radical SAM domain protein K06871 K06871; uncharacterized protein D Apre_0998 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Apre_0212 dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein K06889 K06889; uncharacterized protein D Apre_0322 dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein K06889 K06889; uncharacterized protein D Apre_0384 hypothetical protein K06889 K06889; uncharacterized protein D Apre_0480 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein D Apre_1302 RNA-binding protein K06960 K06960; uncharacterized protein D Apre_1643 protein of unknown function DUF901 K06962 K06962; uncharacterized protein D Apre_0123 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein D Apre_0308 acetyltransferase-like protein K06975 K06975; uncharacterized protein D Apre_0548 MMPL domain protein K07003 K07003; uncharacterized protein D Apre_1156 nitroimidazole resistance protein, putative K07005 K07005; uncharacterized protein D Apre_1526 PfoR protein K07035 K07035; uncharacterized protein D Apre_1142 protein of unknown function zinc metallopeptidase putative K07054 K07054; uncharacterized protein D Apre_0448 aldo/keto reductase K07079 K07079; uncharacterized protein D Apre_0899 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Apre_0508 metallophosphoesterase K07098 K07098; uncharacterized protein D Apre_0778 metallophosphoesterase K07099 K07099; uncharacterized protein D Apre_1531 Helix-turn-helix type 11 domain protein K07105 K07105; uncharacterized protein D Apre_1079 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Apre_0321 conserved hypothetical protein K07137 K07137; uncharacterized protein D Apre_0890 conserved hypothetical protein K07139 K07139; uncharacterized protein D Apre_1403 conserved hypothetical protein K07139 K07139; uncharacterized protein D Apre_1737 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Apre_0010 Domain of unknown function DUF1858 K09155 K09155; uncharacterized protein D Apre_0440 protein of unknown function DUF711 K09157 K09157; uncharacterized protein D Apre_0150 conserved hypothetical protein K09704 K09704; uncharacterized protein D Apre_1305 putative helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein D Apre_0886 RNA binding S1 domain protein K00243 K00243; uncharacterized protein D Apre_0519 protein of unknown function DUF328 K09861 K09861; uncharacterized protein D Apre_1542 protein of unknown function DUF871 K09963 K09963; uncharacterized protein D Apre_0923 exonuclease-like protein K07502 yprB; uncharacterized protein D Apre_0927 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein D Apre_0608 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024