+D GENES KO
#
KEGG Orthology (KO) - Lancefieldella parvula
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:apv00010]
D Apar_0320 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_0928 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_1318 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Apar_0356 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_0357 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_0396 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Apar_0922 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Apar_0924 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Apar_0426 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Apar_0358 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Apar_1040 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Apar_0696 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Apar_0054 Lactate/malate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Apar_0629 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Apar_0818 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Apar_1013 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Apar_0078 glycoside hydrolase family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Apar_0904 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1077 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle)
D Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:apv00030]
D Apar_1318 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Apar_0731 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Apar_0172 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0173 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0333 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0334 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0129 UbiC transcription regulator-associated domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0130 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0332 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Apar_1307 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Apar_1219 Fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D Apar_0134 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Apar_1193 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D Apar_0140 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Apar_1013 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Apar_0342 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Apar_0664 KDPG and KHG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Apar_1280 KDPG and KHG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Apar_0396 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Apar_0356 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_0357 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:apv00040]
D Apar_1293 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Apar_0331 hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Apar_0330 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Apar_0731 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:apv00051]
D Apar_0314 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Apar_0356 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_0357 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_1252 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Apar_0599 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Apar_0396 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Apar_0922 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Apar_1258 LPXTG-motif cell wall anchor domain protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D Apar_1307 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Apar_1119 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D Apar_0321 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Apar_0464 Protein-N(pi)-phosphohistidine--sugar phosphotransferase K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Apar_0465 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component
D Apar_1315 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component
D Apar_0466 PTS system, mannose/fructose/sorbose family, IID subunit K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:apv00052]
D Apar_0818 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Apar_0819 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Apar_0820 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Apar_0346 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Apar_1293 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Apar_1013 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Apar_0320 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_0928 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_0102 glycoside hydrolase family 2 sugar binding K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Apar_0647 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Apar_0154 putative PTS IIA-like nitrogen-regulatory protein PtsN K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D Apar_0151 phosphotransferase system lactose/cellobiose-specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D Apar_0152 PTS system Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D Apar_1069 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D Apar_0356 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_0357 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_1070 ketose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D Apar_1317 PTS system fructose subfamily IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D Apar_1068 PTS system fructose subfamily IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D Apar_1066 PTS system, mannose/fructose/sorbose family, IIB subunit K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D Apar_1065 phosphotransferase system PTS sorbose-specific IIC subunit K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D Apar_1064 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D Apar_1062 sugar isomerase (SIS) K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:apv00053]
D Apar_0325 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D Apar_1286 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D Apar_0327 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_1285 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_0171 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_0326 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_1284 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_0170 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_0329 putative L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D Apar_0331 hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Apar_0330 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:apv00500]
D Apar_1198 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Apar_1293 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Apar_1088 glucan 1,3-beta-glucosidase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58]
D Apar_0081 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Apar_0080 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Apar_1257 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Apar_0079 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Apar_1256 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Apar_0078 glycoside hydrolase family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Apar_1048 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Apar_1049 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Apar_1047 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Apar_1051 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Apar_1050 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Apar_0609 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Apar_0608 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Apar_0904 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1077 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1335 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D Apar_1336 alpha amylase catalytic region K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D Apar_1013 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Apar_0320 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_0928 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_1318 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:apv00520]
D Apar_0904 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1077 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1061 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Apar_0167 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Apar_0208 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Apar_1248 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Apar_0343 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Apar_1199 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D Apar_1296 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Apar_0355 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Apar_0487 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Apar_0927 N-acylglucosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D Apar_0320 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_0928 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_1013 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Apar_1293 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Apar_0819 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Apar_0820 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Apar_0346 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Apar_0647 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Apar_0464 Protein-N(pi)-phosphohistidine--sugar phosphotransferase K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Apar_0465 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component
D Apar_1315 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component
D Apar_0466 PTS system, mannose/fructose/sorbose family, IID subunit K02796 manZ; mannose PTS system EIID component
D Apar_1318 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Apar_0314 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Apar_1048 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Apar_1049 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:apv00620]
D Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Apar_0656 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Apar_0629 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Apar_0644 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Apar_0646 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Apar_1040 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Apar_0054 Lactate/malate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Apar_1039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D Apar_1204 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Apar_0760 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Apar_1268 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Apar_1191 Malate dehydrogenase (oxaloacetate-decarboxylating) K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D Apar_0974 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Apar_0696 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:apv00630]
D Apar_0886 Haloacid dehalogenase domain protein hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Apar_0414 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Apar_0428 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_1105 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_0664 KDPG and KHG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Apar_1280 KDPG and KHG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:apv00640]
D Apar_0644 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Apar_0646 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Apar_0656 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Apar_0054 Lactate/malate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Apar_0061 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:apv00650]
D Apar_0174 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Apar_0629 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Apar_0656 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Apar_1228 Alcohol dehydrogenase zinc-binding domain protein K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D Apar_0922 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:apv00190]
D Apar_1300 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Apar_1298 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Apar_1299 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Apar_1301 H+transporting two-sector ATPase delta (OSCP) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Apar_1297 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Apar_1304 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Apar_1302 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Apar_1303 H+transporting two-sector ATPase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Apar_0296 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:apv00680]
D Apar_0358 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Apar_0974 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Apar_0396 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Apar_0356 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_0357 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Apar_0644 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Apar_0646 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Apar_0426 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:apv00910]
D Apar_0742 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Apar_0610 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Apar_0428 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_1105 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_0337 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Apar_0242 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:apv00920]
D Apar_0828 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Apar_0075 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D Apar_0853 phosphopantetheine-binding K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation [PATH:apv00062]
D Apar_0174 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00071 Fatty acid degradation [PATH:apv00071]
D Apar_0174 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Apar_0629 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:apv00561]
D Apar_0061 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D Apar_0854 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Apar_0729 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 00564 Glycerophospholipid metabolism [PATH:apv00564]
D Apar_0730 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Apar_0729 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Apar_0710 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Apar_0782 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Apar_0749 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D Apar_0102 glycoside hydrolase family 2 sugar binding K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:apv00230]
D Apar_0027 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Apar_0140 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Apar_1013 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Apar_0342 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Apar_0033 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Apar_0026 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Apar_0035 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Apar_0351 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Apar_0034 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Apar_0031 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Apar_1347 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Apar_1351 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Apar_1330 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Apar_0755 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Apar_0977 protein of unknown function DUF523 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Apar_0141 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Apar_0490 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Apar_0107 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Apar_0834 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Apar_0166 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Apar_0189 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Apar_0808 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Apar_1124 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Apar_0451 metal-dependent phosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Apar_0697 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Apar_0292 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D Apar_0520 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Apar_0128 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Apar_0025 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Apar_0440 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D Apar_1140 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Apar_0242 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:apv00240]
D Apar_0613 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Apar_0612 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Apar_0814 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Apar_0813 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Apar_0811 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Apar_0812 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Apar_0369 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Apar_0810 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Apar_0707 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Apar_0649 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Apar_0475 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Apar_0725 cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D Apar_1306 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Apar_0815 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Apar_0139 transcriptional regulator, MarR family K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D Apar_0138 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Apar_0147 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Apar_0146 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Apar_1124 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Apar_0993 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Apar_0292 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D Apar_1092 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Apar_0767 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Apar_0632 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Apar_0244 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:apv00250]
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Apar_0303 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Apar_0084 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Apar_0025 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Apar_1351 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Apar_0814 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Apar_0337 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Apar_0610 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Apar_0428 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_1105 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_0613 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Apar_0612 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Apar_0208 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Apar_0033 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:apv00260]
D Apar_0541 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Apar_0542 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Apar_0540 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Apar_0538 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Apar_0539 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Apar_0426 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Apar_0503 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:apv00270]
D Apar_0598 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Apar_0501 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Apar_0507 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Apar_0384 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Apar_0490 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Apar_1203 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Apar_0541 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Apar_0542 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Apar_0540 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Apar_0075 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Apar_0372 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Apar_1071 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Apar_0054 Lactate/malate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Apar_0503 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:apv00280]
D Apar_1071 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Apar_0174 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Apar_0981 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:apv00290]
D Apar_1071 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:apv00300]
D Apar_0540 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Apar_0541 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Apar_0542 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Apar_0929 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Apar_1281 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Apar_0515 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Apar_0516 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Apar_0233 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Apar_0514 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Apar_0517 Tetrahydrodipicolinate succinyltransferase domain protein K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D Apar_0318 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Apar_0481 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D Apar_0174 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00220 Arginine biosynthesis [PATH:apv00220]
D Apar_0428 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_1105 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_0610 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Apar_0242 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:apv00330]
D Apar_0161 Hydantoinase/oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D Apar_0507 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Apar_1167 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism [PATH:apv00350]
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Apar_0629 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism
D Apar_0174 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:apv00400]
D Apar_0665 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Apar_0659 dehydroquinase class II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Apar_0461 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Apar_0663 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Apar_0662 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Apar_0661 Chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:apv00410]
D Apar_0725 cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D Apar_0244 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00430 Taurine and hypotaurine metabolism [PATH:apv00430]
D Apar_0646 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Apar_0644 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:apv00450]
D Apar_0598 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Apar_0399 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Apar_0907 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Apar_0765 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Apar_0237 selenate reductase YgfK K12527 ygfK; putative selenate reductase [EC:1.97.1.9]
D Apar_0252 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Apar_1085 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Apar_0881 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:apv00460]
D Apar_0303 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Apar_0084 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:apv00470]
D Apar_1245 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Apar_1360 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Apar_0319 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Apar_1073 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Apar_0483 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Apar_0514 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:apv00480]
D Apar_0968 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Apar_0507 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:apv00511]
D Apar_0102 glycoside hydrolase family 2 sugar binding K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:apv00541]
D Apar_1293 Nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Apar_0346 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Apar_0647 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Apar_1007 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Apar_1005 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Apar_0996 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Apar_1006 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Apar_0314 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Apar_0343 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:apv00550]
D Apar_1296 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Apar_0355 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Apar_0487 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Apar_0486 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Apar_0483 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Apar_1360 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Apar_0319 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Apar_0481 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Apar_0792 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D Apar_0709 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Apar_0381 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Apar_0482 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Apar_0485 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Apar_1010 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D Apar_0673 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Apar_0480 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Apar_0750 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Apar_1201 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D Apar_1327 Mur ligase middle domain protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D Apar_1326 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:apv00552]
D Apar_0381 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Apar_1295 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Apar_0187 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Apar_1000 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D Apar_1004 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:apv00730]
D Apar_0913 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_0732 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_0806 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Apar_0060 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Apar_1037 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Apar_1140 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:apv00740]
D Apar_0826 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Apar_0027 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:apv00750]
D Apar_0030 Phosphomethylpyrimidine kinase type-1 K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Apar_0539 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:apv00760]
D Apar_0528 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Apar_0977 protein of unknown function DUF523 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Apar_0141 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Apar_0684 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Apar_0896 amidohydrolase-like protein K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Apar_0182 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Apar_0781 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Apar_0295 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Apar_0473 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:apv00770]
D Apar_0725 cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D Apar_0113 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Apar_0734 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Apar_0858 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Apar_0948 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Apar_1247 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Apar_1071 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Apar_0244 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:apv00790]
D Apar_0624 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Apar_0111 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Apar_0631 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Apar_0625 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Apar_1089 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Apar_0257 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Apar_0258 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Apar_0243 Uncharacterized MobA-related protein-like protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:apv00670]
D Apar_0631 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Apar_0621 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Apar_0623 tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Apar_0622 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Apar_0035 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Apar_1330 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Apar_0867 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Apar_0632 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Apar_0658 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:apv00860]
D Apar_0504 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_1332 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_0724 Phosphoglycerate mutase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:apv00900]
D Apar_0060 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Apar_0711 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Apar_1184 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Apar_0169 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Apar_1183 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Apar_0713 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Apar_0726 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Apar_0345 Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Apar_0709 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
D Apar_0174 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Apar_0172 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0173 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0333 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0334 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0129 UbiC transcription regulator-associated domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Apar_0130 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:apv00523]
D Apar_1007 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Apar_1005 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Apar_0996 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Apar_1006 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Apar_1005 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D Apar_0931 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D Apar_0930 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:apv00261]
D Apar_0541 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Apar_0542 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Apar_0929 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Apar_1281 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Apar_0515 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Apar_0516 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:apv00521]
D Apar_0320 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_0928 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_1013 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Apar_1007 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Apar_1005 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Apar_0996 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Apar_1006 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Apar_0320 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Apar_0928 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:apv00525]
D Apar_1007 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Apar_1005 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Apar_0853 phosphopantetheine-binding K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Apar_0501 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:apv00625]
D Apar_0629 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D Apar_0174 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:apv00626]
D Apar_0629 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:apv03020]
D Apar_1170 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Apar_1169 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Apar_1133 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Apar_0807 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:apv03010]
D Apar_0962 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Apar_0705 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Apar_1155 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Apar_1134 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Apar_1144 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Apar_0019 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Apar_1165 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Apar_1147 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Apar_1249 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Apar_1163 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Apar_1135 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Apar_1166 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Apar_1136 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Apar_1148 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Apar_0789 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Apar_0688 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Apar_1152 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Apar_0021 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Apar_1157 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Apar_0802 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Apar_1173 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Apar_1158 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Apar_1161 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Apar_1160 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Apar_1149 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Apar_1146 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Apar_1171 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Apar_0023 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Apar_1172 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Apar_1174 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Apar_1250 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Apar_1151 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Apar_1142 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Apar_1154 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Apar_1132 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Apar_1145 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Apar_0698 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Apar_0524 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Apar_0678 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Apar_1156 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Apar_1159 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Apar_1150 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Apar_0679 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Apar_0863 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Apar_1153 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Apar_1143 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Apar_0114 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Apar_0855 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Apar_1177 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Apar_1369 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Apar_0523 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Apar_1137 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Apar_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Apar_R0045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Apar_R0043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Apar_R0044 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:apv00970]
D Apar_R0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Apar_R0016 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Apar_R0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Apar_R0049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Apar_R0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Apar_R0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Apar_R0051 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Apar_R0028 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Apar_R0006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Apar_R0032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Apar_R0013 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Apar_R0011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Apar_R0012 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Apar_R0008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Apar_R0031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Apar_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Apar_R0020 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Apar_R0018 tRNA-His K14226 tRNA-His; tRNA His
D Apar_R0001 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Apar_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0014 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0019 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Apar_R0052 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Apar_R0037 tRNA-Met K14230 tRNA-Met; tRNA Met
D Apar_R0025 tRNA-Met K14230 tRNA-Met; tRNA Met
D Apar_R0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D Apar_R0035 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Apar_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Apar_R0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Apar_R0010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Apar_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Apar_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Apar_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Apar_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Apar_R0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Apar_R0034 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Apar_R0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Apar_R0036 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Apar_R0039 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Apar_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val
D Apar_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Apar_R0009 tRNA-Val K14237 tRNA-Val; tRNA Val
D Apar_0504 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_1332 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_0457 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Apar_0420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Apar_0370 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Apar_0693 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Apar_0694 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Apar_0627 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Apar_1338 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Apar_1181 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Apar_1085 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Apar_0881 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Apar_0867 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Apar_0620 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Apar_0833 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Apar_0841 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Apar_1187 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Apar_0529 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Apar_0714 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Apar_0403 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Apar_1055 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Apar_1054 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Apar_1009 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Apar_0653 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:apv03060]
D Apar_1141 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Apar_1176 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Apar_0921 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Apar_1067 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Apar_1366 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_0286 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_1290 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Apar_0849 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Apar_R0047 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Apar_0850 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Apar_1189 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Apar_1095 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D Apar_1094 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Apar_0692 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Apar_0840 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:apv04122]
D Apar_0913 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_0732 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_0912 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Apar_0257 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Apar_0258 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Apar_0806 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:apv03018]
D Apar_0358 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Apar_0788 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Apar_0074 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Apar_1274 VacB and RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Apar_0531 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Apar_0777 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Apar_0787 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Apar_0094 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Apar_0184 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:apv03030]
D Apar_0549 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Apar_0898 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Apar_0115 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Apar_1091 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Apar_0803 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Apar_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Apar_0024 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Apar_0825 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Apar_0020 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0570 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_1103 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Apar_0724 Phosphoglycerate mutase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D Apar_0699 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Apar_1104 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Apar_1111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:apv03410]
D Apar_0123 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Apar_0121 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Apar_0611 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Apar_0444 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Apar_1244 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Apar_0110 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Apar_0735 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Apar_1104 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Apar_0519 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Apar_1111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:apv03420]
D Apar_0124 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Apar_0941 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Apar_0946 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Apar_0938 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Apar_0360 Superfamily I DNA and RNA helicase-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Apar_0382 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Apar_1104 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Apar_1111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:apv03430]
D Apar_0360 Superfamily I DNA and RNA helicase-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Apar_0382 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Apar_0641 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Apar_0642 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Apar_0471 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Apar_0519 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Apar_0020 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0570 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0898 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Apar_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Apar_0115 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Apar_0803 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Apar_1091 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Apar_0549 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Apar_1111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:apv03440]
D Apar_0519 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Apar_0020 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0570 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Apar_0790 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Apar_0117 recombination protein RecR K06187 recR; recombination protein RecR
D Apar_0779 recA protein K03553 recA; recombination protein RecA
D Apar_1104 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Apar_0894 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Apar_0893 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Apar_0895 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Apar_0860 helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Apar_0898 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Apar_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Apar_0115 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Apar_0803 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Apar_1091 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Apar_0549 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Apar_0869 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:apv02010]
D Apar_0254 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Apar_0255 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Apar_0256 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Apar_0009 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Apar_1106 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D Apar_0010 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Apar_0011 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Apar_0607 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Apar_0142 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Apar_0144 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Apar_0145 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Apar_0143 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Apar_0823 ABC-type sugar transport system periplasmic component-like protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D Apar_0821 Monosaccharide-transporting ATPase K10541 mglC; methyl-galactoside transport system permease protein
D Apar_0822 ABC transporter related K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D Apar_0430 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D Apar_0431 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Apar_0533 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Apar_0534 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Apar_0535 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Apar_0536 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Apar_0537 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Apar_0917 extracellular solute-binding protein family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D Apar_0920 binding-protein-dependent transport systems inner membrane component K13890 gsiC; glutathione transport system permease protein
D Apar_0919 binding-protein-dependent transport systems inner membrane component K13891 gsiD; glutathione transport system permease protein
D Apar_0918 oligopeptide/dipeptide ABC transporter, ATPase subunit K13892 gsiA; glutathione transport system ATP-binding protein
D Apar_0282 periplasmic solute binding protein K11601 mntC; manganese transport system substrate-binding protein
D Apar_0280 ABC-3 protein K11602 mntB; manganese transport system permease protein
D Apar_0281 ABC transporter related K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D Apar_1058 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Apar_1056 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Apar_1057 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Apar_0682 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Apar_0352 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Apar_0989 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D Apar_1130 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Apar_0816 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Apar_1278 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Apar_1279 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Apar_1042 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Apar_1041 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Apar_0884 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0421 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0737 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0885 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0422 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0738 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0837 ABC transporter related K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS) [PATH:apv02060]
D Apar_0600 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Apar_0876 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Apar_0904 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1077 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1198 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Apar_1335 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D Apar_0081 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Apar_0080 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Apar_1257 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Apar_0079 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Apar_1256 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Apar_0464 Protein-N(pi)-phosphohistidine--sugar phosphotransferase K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Apar_0465 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component
D Apar_1315 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component
D Apar_0466 PTS system, mannose/fructose/sorbose family, IID subunit K02796 manZ; mannose PTS system EIID component
D Apar_1317 PTS system fructose subfamily IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D Apar_1068 PTS system fructose subfamily IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D Apar_1066 PTS system, mannose/fructose/sorbose family, IIB subunit K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D Apar_1065 phosphotransferase system PTS sorbose-specific IIC subunit K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D Apar_1064 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D Apar_0154 putative PTS IIA-like nitrogen-regulatory protein PtsN K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D Apar_0151 phosphotransferase system lactose/cellobiose-specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D Apar_0152 PTS system Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D Apar_0325 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D Apar_1286 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D Apar_0327 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_1285 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_0171 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_0326 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_1284 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_0170 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_0321 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Apar_1119 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D Apar_1252 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Apar_0599 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:apv03070]
D Apar_1176 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Apar_0921 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Apar_1141 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Apar_1067 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Apar_1366 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_0286 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_1290 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Apar_0850 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Apar_0849 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Apar_1189 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Apar_1095 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D Apar_1094 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:apv02020]
D Apar_0433 peptidase S1 and S6 chymotrypsin/Hap K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D Apar_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Apar_0282 periplasmic solute binding protein K11601 mntC; manganese transport system substrate-binding protein
D Apar_0281 ABC transporter related K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D Apar_0280 ABC-3 protein K11602 mntB; manganese transport system permease protein
D Apar_1333 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Apar_1045 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Apar_1044 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR
D Apar_1034 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Apar_1033 type II secretion system protein K12510 tadB; tight adherence protein B
D Apar_1032 type II secretion system protein K12511 tadC; tight adherence protein C
D Apar_0428 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_1105 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_0137 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Apar_1162 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:apv02024]
D Apar_0533 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Apar_0534 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Apar_0535 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Apar_0536 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Apar_0537 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Apar_0137 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Apar_0837 ABC transporter related K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Apar_0955 4-phytase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Apar_0935 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Apar_0960 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Apar_0934 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Apar_0958 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Apar_0933 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Apar_0957 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Apar_0932 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Apar_0956 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Apar_1366 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_0286 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_1176 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Apar_0921 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Apar_1141 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Apar_1067 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Apar_1290 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Apar_0850 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Apar_0849 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D Apar_0823 ABC-type sugar transport system periplasmic component-like protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
C 02040 Flagellar assembly
D Apar_0824 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Apar_0358 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:apv01501]
D Apar_0673 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Apar_0480 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:apv01502]
D Apar_1360 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Apar_0319 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Apar_1245 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Apar_0481 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Apar_0482 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Apar_0485 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:apv01000]
C 01001 Protein kinases [BR:apv01001]
D Apar_1345 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Apar_1340 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Apar_0454 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Apar_0915 anti-sigma-factor antagonist K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Apar_1333 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Apar_1045 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Apar_1324 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:apv01009]
D Apar_1343 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:apv01002]
D Apar_0840 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Apar_0899 Bleomycin hydrolase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D Apar_0900 Bleomycin hydrolase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D Apar_0340 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D Apar_0189 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Apar_0954 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Apar_0837 ABC transporter related K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Apar_0756 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Apar_0380 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Apar_1075 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Apar_0033 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Apar_0208 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Apar_1118 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D Apar_1261 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D Apar_0032 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D Apar_0048 Abortive infection protein K07052 K07052; CAAX protease family protein
D Apar_0880 Abortive infection protein K07052 K07052; CAAX protease family protein
D Apar_1205 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Apar_0378 Peptidase M16C associated domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D Apar_0233 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Apar_0748 peptidase M20 K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D Apar_0155 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Apar_0953 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Apar_1139 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Apar_0463 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Apar_1352 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Apar_0317 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D Apar_0842 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Apar_0712 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Apar_0433 peptidase S1 and S6 chymotrypsin/Hap K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D Apar_0750 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Apar_1201 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D Apar_0615 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Apar_0770 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Apar_0551 transcriptional regulator, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Apar_0692 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Apar_0218 peptidase S51 dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D Apar_0995 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:apv01003]
D Apar_1047 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Apar_1010 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D Apar_1125 glycosyl transferase family 2 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:apv01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:apv01011]
D Apar_1296 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Apar_0355 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Apar_0487 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Apar_0486 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Apar_0483 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Apar_1360 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Apar_0319 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Apar_1245 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Apar_1073 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Apar_0482 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Apar_0485 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Apar_0381 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Apar_0939 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D Apar_1010 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D Apar_0673 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Apar_0480 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Apar_0750 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Apar_1201 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D Apar_0756 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Apar_0380 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Apar_1075 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Apar_1261 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D Apar_0032 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D Apar_0459 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:apv01004]
D Apar_0854 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Apar_0729 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:apv01006]
D Apar_0345 Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Apar_0709 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Apar_0773 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:apv01007]
D Apar_0504 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_1332 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_1009 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Apar_0653 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Apar_1181 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Apar_0529 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Apar_1085 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Apar_0881 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Apar_0841 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Apar_0620 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Apar_0833 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Apar_1187 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Apar_0420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Apar_0370 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Apar_0403 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Apar_0693 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Apar_0694 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Apar_1338 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Apar_0714 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Apar_0627 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Apar_0457 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Apar_1055 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Apar_1054 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Apar_0108 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Apar_0598 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Apar_1071 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:apv00194]
D Apar_1297 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Apar_1298 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Apar_1299 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Apar_1300 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Apar_1301 H+transporting two-sector ATPase delta (OSCP) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Apar_1302 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Apar_1303 H+transporting two-sector ATPase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Apar_1304 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:apv03000]
D Apar_0424 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D Apar_1220 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Apar_0012 transcriptional regulator, LacI family K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D Apar_0150 transcriptional regulator, LacI family K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D Apar_0603 transcriptional regulator, GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D Apar_1334 transcriptional regulator, GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D Apar_0077 transcriptional regulator, GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D Apar_1063 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D Apar_0215 transcriptional regulator, TetR family K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D Apar_0969 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Apar_0097 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D Apar_1354 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Apar_0137 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Apar_0397 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Apar_1168 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Apar_1294 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Apar_0597 hypothetical protein K07726 K07726; putative transcriptional regulator
D Apar_0438 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Apar_1362 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Apar_1011 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Apar_0815 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Apar_0768 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D Apar_0477 protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:apv03021]
D Apar_1133 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Apar_1170 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Apar_1169 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Apar_0807 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Apar_0824 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Apar_0455 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily K03090 sigB; RNA polymerase sigma-B factor
D Apar_0831 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Apar_0470 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Apar_1175 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Apar_0916 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Apar_1096 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Apar_0454 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Apar_0915 anti-sigma-factor antagonist K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Apar_1188 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Apar_0531 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:apv03019]
D Apar_0852 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Apar_0787 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Apar_0777 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Apar_1274 VacB and RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Apar_0074 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Apar_0358 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Apar_0788 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Apar_0531 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Apar_0094 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Apar_0184 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Apar_0926 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:apv03011]
D Apar_0962 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Apar_0705 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Apar_1155 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Apar_1134 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Apar_1144 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Apar_0019 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Apar_1165 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Apar_1147 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Apar_1249 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Apar_1163 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Apar_1135 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Apar_1166 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Apar_1136 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Apar_1148 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Apar_0789 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Apar_0688 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Apar_1152 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Apar_0021 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Apar_1157 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Apar_0802 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Apar_1173 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Apar_1158 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Apar_1161 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Apar_1160 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Apar_1149 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Apar_1146 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Apar_0023 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Apar_1172 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Apar_1174 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Apar_1171 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Apar_1250 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Apar_1151 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Apar_1142 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Apar_1154 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Apar_1132 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Apar_1145 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Apar_0698 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Apar_0524 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Apar_0678 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Apar_1156 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Apar_1159 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Apar_1150 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Apar_0679 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Apar_0863 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Apar_1153 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Apar_1143 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Apar_0114 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Apar_0855 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Apar_1177 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Apar_1369 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Apar_0523 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Apar_1137 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Apar_R0043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Apar_R0044 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Apar_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Apar_R0045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:apv03009]
D Apar_0852 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Apar_0791 GTP-binding protein Era K03595 era; GTPase
D Apar_0683 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Apar_0831 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Apar_0470 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Apar_1175 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Apar_1084 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Apar_0866 NusB/RsmB/TIM44 K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Apar_0859 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Apar_1364 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Apar_0478 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Apar_1087 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Apar_0472 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Apar_1180 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Apar_0072 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Apar_1014 THUMP domain protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D Apar_1361 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Apar_0652 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Apar_0723 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Apar_0839 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Apar_0410 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Apar_0690 16S rRNA-processing protein K02860 rimM; 16S rRNA processing protein RimM
D Apar_0783 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Apar_0458 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Apar_1037 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Apar_0728 small GTP-binding protein K03977 engA; GTPase
D Apar_0772 GTP-binding proten HflX K03665 hflX; GTPase
D Apar_1308 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Apar_0520 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Apar_0829 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Apar_0832 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Apar_0686 iojap-like protein K09710 ybeB; ribosome-associated protein
D Apar_0793 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Apar_0983 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Apar_0186 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Apar_0856 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:apv03016]
D Apar_0497 metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Apar_0504 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_1332 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_0714 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Apar_0841 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Apar_0833 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Apar_1085 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Apar_0881 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Apar_0529 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Apar_1187 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Apar_0420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Apar_0457 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Apar_0370 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Apar_0627 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Apar_1338 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Apar_1181 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Apar_0620 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Apar_0403 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Apar_1055 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Apar_1054 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Apar_1009 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Apar_0653 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Apar_0643 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Apar_0291 putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Apar_0905 Methyltransferase type 12 K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229]
D Apar_1129 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Apar_0827 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Apar_0913 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_0732 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_0906 Histone acetyltransferase K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D Apar_1308 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Apar_0773 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Apar_0252 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Apar_1368 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Apar_R0029 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Apar_0165 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Apar_0639 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Apar_0693 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Apar_0694 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Apar_0940 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D Apar_0071 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Apar_0800 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Apar_0774 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Apar_0795 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Apar_0703 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Apar_0691 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Apar_0044 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Apar_0912 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Apar_0878 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Apar_1089 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Apar_0879 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Apar_0518 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Apar_0806 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Apar_0106 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Apar_1243 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Apar_0619 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Apar_1274 VacB and RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Apar_0788 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:apv03012]
D Apar_0830 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Apar_0522 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Apar_0719 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Apar_0706 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Apar_1178 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Apar_0059 small GTP-binding protein K02355 fusA; elongation factor G
D Apar_1164 translation elongation factor G K02355 fusA; elongation factor G
D Apar_1310 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Apar_0708 ribosome recycling factor K02838 frr; ribosome recycling factor
D Apar_1309 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Apar_0339 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Apar_0308 protein of unknown function UPF0099 K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
D Apar_1138 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Apar_0468 translation elongation factor P K02356 efp; elongation factor P
D Apar_1289 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:apv03110]
D Apar_0100 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Apar_1186 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Apar_0616 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Apar_0094 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Apar_0184 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Apar_0796 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Apar_0797 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D Apar_0096 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Apar_0095 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Apar_0104 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Apar_0183 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Apar_0842 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Apar_1304 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Apar_0668 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Apar_1019 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Apar_1320 thioredoxin K03671 TXN; thioredoxin
D Apar_0976 glutaredoxin K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:apv04131]
D Apar_0924 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Apar_0426 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Apar_1040 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome [BR:apv03051]
C 03032 DNA replication proteins [BR:apv03032]
D Apar_1103 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Apar_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Apar_0024 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Apar_0825 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Apar_0020 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0570 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0898 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Apar_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Apar_0803 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Apar_1091 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Apar_0549 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Apar_0115 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Apar_0724 Phosphoglycerate mutase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D Apar_0699 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Apar_1104 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Apar_1111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Apar_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Apar_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Apar_1093 DNA topoisomerase type IA central domain protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:apv03036]
D Apar_0852 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Apar_0096 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Apar_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Apar_0085 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Apar_0851 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Apar_0721 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Apar_0722 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Apar_1279 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Apar_0480 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Apar_0786 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Apar_0488 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Apar_0484 cell cycle protein K03588 ftsW; cell division protein FtsW
D Apar_1278 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Apar_0489 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Apar_0494 DivIVA family protein K04074 divIVA; cell division initiation protein
D Apar_0492 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF
D Apar_0670 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Apar_0671 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Apar_0674 cell cycle protein K05837 rodA; rod shape determining protein RodA
D Apar_1363 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Apar_1362 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Apar_1364 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Apar_0703 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Apar_0704 integrase family protein K04763 xerD; integrase/recombinase XerD
D Apar_0476 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Apar_0196 integrase family protein K04763 xerD; integrase/recombinase XerD
D Apar_0207 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Apar_0361 small GTP-binding protein K03978 engB; GTP-binding protein
D Apar_0925 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:apv03400]
D Apar_0611 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Apar_0121 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Apar_0123 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Apar_0634 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Apar_0767 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Apar_0444 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Apar_1244 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Apar_0110 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Apar_0735 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Apar_0519 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Apar_1111 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Apar_1104 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Apar_0941 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Apar_0946 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Apar_0938 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Apar_0360 Superfamily I DNA and RNA helicase-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Apar_0382 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Apar_1170 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Apar_1169 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Apar_1133 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Apar_0807 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Apar_0124 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Apar_0641 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Apar_0642 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Apar_0471 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Apar_0898 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Apar_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Apar_0803 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Apar_1091 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Apar_0549 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Apar_0115 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Apar_0020 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0570 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0779 recA protein K03553 recA; recombination protein RecA
D Apar_0894 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Apar_0893 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Apar_0895 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Apar_0869 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Apar_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Apar_0860 helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Apar_0790 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Apar_0117 recombination protein RecR K06187 recR; recombination protein RecR
D Apar_0474 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Apar_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Apar_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Apar_1093 DNA topoisomerase type IA central domain protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Apar_0687 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Apar_1117 UMUC domain protein DNA-repair protein K03502 umuC; DNA polymerase V
D Apar_0770 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Apar_0551 transcriptional regulator, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Apar_0778 regulatory protein RecX K03565 recX; regulatory protein
D Apar_1359 DNA polymerase III, epsilon subunit K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Apar_0828 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:apv03029]
D Apar_0830 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Apar_0522 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Apar_0706 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Apar_1178 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Apar_0059 small GTP-binding protein K02355 fusA; elongation factor G
D Apar_1164 translation elongation factor G K02355 fusA; elongation factor G
D Apar_0791 GTP-binding protein Era K03595 era; GTPase
D Apar_1009 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Apar_0833 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Apar_0420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Apar_0529 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Apar_0020 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0570 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Apar_0094 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Apar_0095 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Apar_0184 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Apar_0183 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Apar_0796 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Apar_0797 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D Apar_0913 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_0732 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_1366 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_0286 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:apv02000]
D Apar_1042 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Apar_1041 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Apar_0884 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0421 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0737 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0885 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0422 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0738 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Apar_0028 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Apar_0837 ABC transporter related K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Apar_0272 ABC transporter related K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Apar_0273 ABC transporter related K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Apar_0736 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein
D Apar_0254 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Apar_0255 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Apar_0256 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Apar_0009 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Apar_1106 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D Apar_0010 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Apar_0011 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Apar_0951 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Apar_0950 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Apar_0391 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Apar_0949 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Apar_0607 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Apar_0604 extracellular solute-binding protein family 1 K25086 musE; maltose transport system substrate-binding protein
D Apar_0605 binding-protein-dependent transport systems inner membrane component K25087 musF; maltose transport system permease protein
D Apar_0606 binding-protein-dependent transport systems inner membrane component K25088 musG; maltose transport system permease protein
D Apar_0823 ABC-type sugar transport system periplasmic component-like protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D Apar_0821 Monosaccharide-transporting ATPase K10541 mglC; methyl-galactoside transport system permease protein
D Apar_0822 ABC transporter related K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D Apar_0142 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Apar_0144 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Apar_0145 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Apar_0143 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Apar_0430 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D Apar_0431 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Apar_0533 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Apar_0534 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Apar_0535 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Apar_0536 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Apar_0537 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Apar_0429 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Apar_0448 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Apar_0984 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Apar_0446 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Apar_0445 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Apar_0447 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Apar_0917 extracellular solute-binding protein family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D Apar_0920 binding-protein-dependent transport systems inner membrane component K13890 gsiC; glutathione transport system permease protein
D Apar_0919 binding-protein-dependent transport systems inner membrane component K13891 gsiD; glutathione transport system permease protein
D Apar_0918 oligopeptide/dipeptide ABC transporter, ATPase subunit K13892 gsiA; glutathione transport system ATP-binding protein
D Apar_0955 4-phytase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Apar_0935 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Apar_0960 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Apar_0934 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Apar_0958 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Apar_0933 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Apar_0957 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Apar_0932 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Apar_0956 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Apar_0282 periplasmic solute binding protein K11601 mntC; manganese transport system substrate-binding protein
D Apar_0280 ABC-3 protein K11602 mntB; manganese transport system permease protein
D Apar_0281 ABC transporter related K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D Apar_1058 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Apar_1056 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Apar_1057 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Apar_0986 conserved hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D Apar_0682 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Apar_0352 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Apar_0989 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D Apar_1130 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Apar_1131 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Apar_0353 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Apar_0681 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Apar_0988 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Apar_0816 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Apar_1278 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Apar_1279 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Apar_0058 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Apar_0216 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Apar_0419 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Apar_0436 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Apar_0437 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Apar_0602 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Apar_0057 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Apar_0217 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Apar_0363 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Apar_0435 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Apar_0418 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Apar_0349 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Apar_0230 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Apar_0377 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Apar_1078 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Apar_1113 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Apar_1079 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Apar_1114 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Apar_0229 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Apar_0407 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Apar_0402 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Apar_0373 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Apar_0425 drug resistance transporter, EmrB/QacA subfamily K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D Apar_0600 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Apar_0876 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Apar_0904 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1077 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Apar_1198 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Apar_1335 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D Apar_1119 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D Apar_0321 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Apar_0081 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Apar_0080 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Apar_1257 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Apar_0079 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Apar_1256 PTS system, lactose/cellobiose family IIC subunit K02761 celB; cellobiose PTS system EIIC component
D Apar_0154 putative PTS IIA-like nitrogen-regulatory protein PtsN K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D Apar_0151 phosphotransferase system lactose/cellobiose-specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D Apar_0152 PTS system Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D Apar_0464 Protein-N(pi)-phosphohistidine--sugar phosphotransferase K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Apar_0465 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component
D Apar_1315 phosphotransferase system PTS sorbose-specific IIC subunit K02795 manY; mannose PTS system EIIC component
D Apar_0466 PTS system, mannose/fructose/sorbose family, IID subunit K02796 manZ; mannose PTS system EIID component
D Apar_1317 PTS system fructose subfamily IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D Apar_1068 PTS system fructose subfamily IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D Apar_1066 PTS system, mannose/fructose/sorbose family, IIB subunit K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D Apar_1065 phosphotransferase system PTS sorbose-specific IIC subunit K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D Apar_1064 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D Apar_0325 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D Apar_1286 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D Apar_0327 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_1285 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_0171 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D Apar_0326 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_1284 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_0170 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D Apar_0316 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Apar_0069 MgtE intracellular region K06213 mgtE; magnesium transporter
D Apar_0423 CrcB protein K06199 crcB; fluoride exporter
D Apar_0064 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Apar_0991 Pyrrolo-quinoline quinone K21449 ata; trimeric autotransporter adhesin
D Apar_0715 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Apar_0284 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D Apar_0449 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D Apar_1101 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Apar_0408 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D Apar_1230 sodium/hydrogen exchanger K24163 nhaK; monovalent cation/hydrogen antiporter
D Apar_0766 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Apar_0757 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Apar_0939 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D Apar_1015 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Apar_0354 conserved hypothetical protein K23675 fmnP; riboflavin transporter
D Apar_0484 cell cycle protein K03588 ftsW; cell division protein FtsW
D Apar_1107 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D Apar_0972 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Apar_0973 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Apar_0971 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:apv02044]
D Apar_1034 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Apar_1033 type II secretion system protein K12510 tadB; tight adherence protein B
D Apar_1032 type II secretion system protein K12511 tadC; tight adherence protein C
D Apar_0493 protein of unknown function YGGT K02221 yggT; YggT family protein
D Apar_0805 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D Apar_0804 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Apar_1232 beta-lactamase domain protein K02238 comEC; competence protein ComEC
D Apar_0309 peptidase A24A prepilin type IV K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Apar_1290 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Apar_1176 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Apar_0921 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Apar_1141 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Apar_0849 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Apar_0850 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Apar_1067 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Apar_1366 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_0286 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Apar_1189 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Apar_1095 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D Apar_1094 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:apv02042]
D Apar_1208 C4-dicarboxylate transporter/malic acid transport protein K11041 eta; exfoliative toxin A/B
D Apar_0064 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:apv02022]
D Apar_1333 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Apar_1045 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Apar_1044 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR
D Apar_0090 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Apar_1324 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Apar_1323 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Apar_1260 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator
C 02035 Bacterial motility proteins [BR:apv02035]
D Apar_1034 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:apv04812]
D Apar_0670 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Apar_0489 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Apar_1363 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Apar_1362 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:apv04147]
D Apar_0358 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Apar_0924 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Apar_1040 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Apar_0184 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Apar_0094 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Apar_1318 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Apar_0834 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Apar_1178 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Apar_0643 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Apar_0054 Lactate/malate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Apar_1140 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Apar_0755 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Apar_0244 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Apar_0819 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Apar_1051 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Apar_0428 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_1105 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Apar_1330 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Apar_0922 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Apar_0426 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:apv02048]
D Apar_0197 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Apar_1225 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Apar_0198 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Apar_0199 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Apar_1224 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Apar_1214 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Apar_1213 McrBC 5-methylcytosine restriction system component-like protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D Apar_0223 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D Apar_0222 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D Apar_0511 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D Apar_0942 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D Apar_0489 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Apar_0670 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Apar_0504 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_1332 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Apar_0913 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Apar_0732 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:apv01504]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:apv03100]
D Apar_R0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Apar_R0016 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Apar_R0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Apar_R0049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Apar_R0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Apar_R0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Apar_R0051 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Apar_R0028 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Apar_R0006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Apar_R0032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Apar_R0013 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Apar_R0011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Apar_R0012 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Apar_R0008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Apar_R0031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Apar_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Apar_R0020 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Apar_R0018 tRNA-His K14226 tRNA-His; tRNA His
D Apar_R0001 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Apar_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0014 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Apar_R0019 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Apar_R0052 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Apar_R0037 tRNA-Met K14230 tRNA-Met; tRNA Met
D Apar_R0025 tRNA-Met K14230 tRNA-Met; tRNA Met
D Apar_R0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D Apar_R0035 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Apar_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Apar_R0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Apar_R0010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Apar_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Apar_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Apar_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Apar_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Apar_R0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Apar_R0034 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Apar_R0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Apar_R0036 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Apar_R0039 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Apar_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val
D Apar_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Apar_R0009 tRNA-Val K14237 tRNA-Val; tRNA Val
D Apar_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Apar_R0045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Apar_R0043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Apar_R0044 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Apar_R0047 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Apar_R0029 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Apar_R0042 ssrA; tmRNA as predicted by Rfam (RF00023), score 165.49 K15035 ssrA; transfer-messenger RNA
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Apar_1120 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Apar_0740 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D Apar_0908 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D Apar_0897 Desulfoferrodoxin ferrous iron-binding region K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Apar_0301 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2]
D Apar_0338 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Apar_1123 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Apar_0654 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Apar_0135 (Formate-C-acetyltransferase)-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Apar_0526 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Apar_1080 Prolyl aminopeptidase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D Apar_0992 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Apar_0264 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Apar_0322 1-phosphofructokinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D Apar_0861 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Apar_1185 protein of unknown function DUF147 K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D Apar_0460 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Apar_1083 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Apar_0618 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Apar_0868 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Apar_0752 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Apar_0245 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Apar_0745 67 kDa myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D Apar_1246 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Apar_0239 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D Apar_0439 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Apar_1038 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Apar_0290 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D Apar_1194 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D Apar_0666 ATPase, P-type (transporting), HAD superfamily, subfamily IC K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D Apar_0650 4Fe-4S ferredoxin, iron-sulfur binding protein K05337 fer; ferredoxin
D Apar_0398 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D Apar_0964 flavodoxin/nitric oxide synthase K03839 fldA; flavodoxin I
D Apar_0088 4Fe-4S ferredoxin iron-sulfur binding domain protein K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
D Apar_1102 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Apar_0491 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Apar_0911 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D Apar_1202 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Apar_0890 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Apar_0554 prophage antirepressor K07741 antB; anti-repressor protein
C 99974 Translation
C 99975 Protein processing
D Apar_0614 trigger factor K03545 tig; trigger factor
D Apar_1272 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Apar_0701 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Apar_0251 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor
D Apar_0253 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Apar_0739 methylated-DNA/protein-cysteinemethyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Apar_0434 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Apar_0700 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Apar_0702 SMF family protein K04096 smf; DNA processing protein
D Apar_0452 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Apar_0404 hypothetical protein K07483 K07483; transposase
D Apar_0405 Integrase catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Apar_0116 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Apar_1276 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Apar_0043 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Apar_0385 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D Apar_1365 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D Apar_0775 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
C 99995 Signaling proteins
D Apar_0016 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Apar_1017 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D Apar_0794 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Apar_0784 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D Apar_0305 glycoside hydrolase family 25 K07273 acm; lysozyme
D Apar_0228 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Apar_0716 hypothetical protein K21908 hdeD; membrane protein HdeD
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Apar_0109 PHP domain protein K04477 ycdX; putative hydrolase
D Apar_0401 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Apar_0400 SufBD protein K09015 sufD; Fe-S cluster assembly protein SufD
D Apar_0070 LemA family protein K03744 lemA; LemA protein
D Apar_1312 SNARE associated Golgi protein K03975 dedA; membrane-associated protein
D Apar_0498 YhgE/Pip C-terminal domain protein K01421 yhgE; putative membrane protein
D Apar_0499 YhgE/Pip N-terminal domain protein K01421 yhgE; putative membrane protein
D Apar_0875 membrane protein of unknown function K08972 K08972; putative membrane protein
D Apar_0073 protein of unknown function DUF1304 K08987 K08987; putative membrane protein
C 99997 Function unknown
D Apar_0267 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D Apar_0637 hypothetical protein K06950 K06950; uncharacterized protein
D Apar_0689 RNA-binding protein (contains KH domain protein)-like protein K06960 K06960; uncharacterized protein
D Apar_1179 protein of unknown function DUF901 K06962 K06962; uncharacterized protein
D Apar_0640 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D Apar_0076 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Apar_1322 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Apar_0041 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Apar_0945 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D Apar_0733 protein of unknown function DUF164 K07164 K07164; uncharacterized protein
D Apar_1367 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Apar_0008 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Apar_0510 putative PAS/PAC sensor protein K09155 K09155; uncharacterized protein
D Apar_1221 protein of unknown function DUF711 K09157 K09157; uncharacterized protein
D Apar_0848 conserved hypothetical protein K09790 K09790; uncharacterized protein
D Apar_0872 protein of unknown function DUF328 K09861 K09861; uncharacterized protein
D Apar_1255 protein of unknown function DUF871 K09963 K09963; uncharacterized protein
D Apar_1197 protein of unknown function DUF871 K09963 K09963; uncharacterized protein
D Apar_0042 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
D Apar_0386 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 7, 2024