+D GENES KO
#
KEGG Orthology (KO) - Berkelbacteria bacterium GW2011_GWE1_39_12
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bbgw00010]
D UT28_C0001G0991 bifunctional phosphoglucose/phosphomannose isomerase, glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D UT28_C0001G0174 class II fructose-1,6-bisphosphate aldolase, fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UT28_C0001G0175 tpiA; triosephosphate isomerase, triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UT28_C0001G0170 glyceraldehyde-3-phosphate dehydrogenase, type I, glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UT28_C0001G0164 phosphoglycerate kinase, phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UT28_C0001G0599 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (phosphoglyceromutase) (pgam), bpg-dependent pgam, dpgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D UT28_C0001G0987 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UT28_C0001G0988 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UT28_C0001G0989 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UT28_C0001G0600 eno, phosphopyruvate hydratase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0990 enolase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0727 pyruvate kinase, pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UT28_C0001G0547 ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase, pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D UT28_C0001G0985 korA2; 2-oxoglutarate synthase KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UT28_C0001G0984 vorA2; ketoisovalerate oxidoreductase VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D UT28_C0001G0986 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
C 00020 Citrate cycle (TCA cycle) [PATH:bbgw00020]
D UT28_C0001G0985 korA2; 2-oxoglutarate synthase KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UT28_C0001G0984 vorA2; ketoisovalerate oxidoreductase VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
C 00030 Pentose phosphate pathway [PATH:bbgw00030]
D UT28_C0001G0991 bifunctional phosphoglucose/phosphomannose isomerase, glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D UT28_C0001G0174 class II fructose-1,6-bisphosphate aldolase, fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
C 00040 Pentose and glucuronate interconversions
D UT28_C0001G0430 UTP-glucose-1-phosphate uridylyltransferase, UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00051 Fructose and mannose metabolism [PATH:bbgw00051]
D UT28_C0001G0991 bifunctional phosphoglucose/phosphomannose isomerase, glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D UT28_C0001G0345 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D UT28_C0001G0031 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D UT28_C0001G0174 class II fructose-1,6-bisphosphate aldolase, fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UT28_C0001G0175 tpiA; triosephosphate isomerase, triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:bbgw00052]
D UT28_C0001G0642 galactose-1-phosphate uridyl transferase, Gal-1-P uridylyltransferase, UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D UT28_C0001G0650 galE; UDP-glucose 4-epimerase, UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UT28_C0001G0430 UTP-glucose-1-phosphate uridylyltransferase, UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:bbgw00500]
D UT28_C0001G0430 UTP-glucose-1-phosphate uridylyltransferase, UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UT28_C0001G0648 glycogen/starch synthase, starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D UT28_C0001G0651 glycogen/starch synthase, starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D UT28_C0001G0991 bifunctional phosphoglucose/phosphomannose isomerase, glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bbgw00520]
D UT28_C0001G1021 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UT28_C0001G0134 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase, bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UT28_C0001G0997 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1, UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UT28_C0001G0112 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UT28_C0001G0388 dTDP-D-glucose 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D UT28_C0001G0399 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D UT28_C0001G0394 pseudaminic acid CMP-transferase, N-acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D UT28_C0001G0430 UTP-glucose-1-phosphate uridylyltransferase, UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UT28_C0001G0642 galactose-1-phosphate uridyl transferase, Gal-1-P uridylyltransferase, UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D UT28_C0001G0650 galE; UDP-glucose 4-epimerase, UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UT28_C0001G0991 bifunctional phosphoglucose/phosphomannose isomerase, glucose/mannose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D UT28_C0001G0345 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D UT28_C0001G0031 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:bbgw00620]
D UT28_C0001G0985 korA2; 2-oxoglutarate synthase KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UT28_C0001G0984 vorA2; ketoisovalerate oxidoreductase VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D UT28_C0001G0727 pyruvate kinase, pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UT28_C0001G0986 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D UT28_C0001G0547 ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase, pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
C 00630 Glyoxylate and dicarboxylate metabolism
D UT28_C0001G0784 glyA; serine hydroxymethyltransferase, glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism
D UT28_C0001G0986 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
C 00650 Butanoate metabolism
D UT28_C0001G0985 korA2; 2-oxoglutarate synthase KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D UT28_C0001G0984 vorA2; ketoisovalerate oxidoreductase VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D UT28_C0001G0175 tpiA; triosephosphate isomerase, triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bbgw00190]
D UT28_C0001G0475 ATP synthase F1 subunit alpha, F-type H+-transporting ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D UT28_C0001G0472 F0F1 ATP synthase subunit beta, F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D UT28_C0001G0473 ATP synthase F1 subunit gamma, F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D UT28_C0001G0476 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D UT28_C0001G0471 atpC; F0F1 ATP synthase subunit epsilon, F-type H+-transporting ATPase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D UT28_C0001G0479 atpB; ATP synthase F0 subunit A, F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UT28_C0001G0477 atpF; F0F1-type ATP synthase subunit b, F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UT28_C0001G0478 atpE; ATP synthase subunit c, F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D UT28_C0001G0379 ppaC; manganese-dependent inorganic pyrophosphatase, manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:bbgw00680]
D UT28_C0001G0784 glyA; serine hydroxymethyltransferase, glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UT28_C0001G0600 eno, phosphopyruvate hydratase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0990 enolase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0174 class II fructose-1,6-bisphosphate aldolase, fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UT28_C0001G0547 ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase, pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D UT28_C0001G0599 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (phosphoglyceromutase) (pgam), bpg-dependent pgam, dpgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D UT28_C0001G0987 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UT28_C0001G0988 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UT28_C0001G0989 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism
D UT28_C0001G0682 phosphoesterase RecJ domain-containing protein, phosphoesterase RecJ domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bbgw00061]
D UT28_C0001G0503 fabH; 3-oxoacyl-(acyl carrier protein) synthase III, 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D UT28_C0001G0504 fabZ; putative beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ, 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bbgw00561]
D UT28_C0001G0493 hypothetical protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D UT28_C0001G0383 1-acyl-sn-glycerol-3-phosphate acyltransferase, 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D UT28_C0001G0809 mgtA; GDP-mannose-dependent alpha-mannosyltransferase MgtA K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism
D UT28_C0001G0383 1-acyl-sn-glycerol-3-phosphate acyltransferase, 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bbgw00230]
D UT28_C0001G0673 amidophosphoribosyltransferase, amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D UT28_C0001G0129 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D UT28_C0001G0672 hypothetical protein K01587 PAICS; phosphoribosylaminoimidazole carboxylase / phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:4.1.1.21 6.3.2.6]
D UT28_C0001G0671 adenylosuccinate lyase, adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D UT28_C0001G0670 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UT28_C0001G0117 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D UT28_C0001G0306 nucleoside diphosphate kinase, nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UT28_C0001G0822 nucleoside triphosphatase (putative) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D UT28_C0001G0024 guanylate kinase, guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D UT28_C0001G0009 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UT28_C0001G0674 hypothetical protein K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D UT28_C0001G0960 nucleoside-triphosphate--adenylate kinase, adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:bbgw00240]
D UT28_C0001G0813 PyrD, dihydroorotate dehydrogenase 1B, dihydroorotate dehydrogenase (fumarate) K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D UT28_C0001G0319 phosphoribosyltransferase, orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D UT28_C0001G0306 nucleoside diphosphate kinase, nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UT28_C0001G0348 pyrG; CTP synthetase, CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D UT28_C0001G0009 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UT28_C0001G0785 CMP/dCMP deaminase zinc-binding protein, dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D UT28_C0001G0782 thymidylate kinase, dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D UT28_C0001G0787 deoxyuridine 5-triphosphate nucleotidohydrolase, dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bbgw00250]
D UT28_C0001G0766 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D UT28_C0001G0671 adenylosuccinate lyase, adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D UT28_C0001G0673 amidophosphoribosyltransferase, amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bbgw00260]
D UT28_C0001G0273 threonine synthase, threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D UT28_C0001G0784 glyA; serine hydroxymethyltransferase, glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UT28_C0001G0599 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (phosphoglyceromutase) (pgam), bpg-dependent pgam, dpgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D UT28_C0001G0987 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UT28_C0001G0988 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UT28_C0001G0989 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00270 Cysteine and methionine metabolism [PATH:bbgw00270]
D UT28_C0001G0953 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D UT28_C0001G0117 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
C 00280 Valine, leucine and isoleucine degradation
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:bbgw00300]
D UT28_C0001G0385 LL-diaminopimelate aminotransferase, LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D UT28_C0001G0384 diaminopimelate decarboxylase, diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D UT28_C0001G0495 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UT28_C0001G0120 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
C 00220 Arginine biosynthesis [PATH:bbgw00220]
D UT28_C0001G0269 hypothetical protein K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D UT28_C0001G0265 hypothetical protein K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D UT28_C0001G0266 acetylornithine deacetylase, acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
D UT28_C0001G0396 hisH; imidazole glycerol phosphate synthase subunit HisH, glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D UT28_C0001G0397 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
D UT28_C0001G0821 hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism
D UT28_C0001G0240 metG; methionyl-tRNA synthetase, methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bbgw00460]
D UT28_C0001G0766 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D UT28_C0001G0784 glyA; serine hydroxymethyltransferase, glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bbgw00470]
D UT28_C0001G0702 ddl, D-alanyl-alanine synthetase A, D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UT28_C0001G0132 glutamate racemase, glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D UT28_C0001G0116 UDP-N-acetylmuramoylalanine--D-glutamate ligase, UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UT28_C0001G0271 L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D UT28_C0001G0384 diaminopimelate decarboxylase, diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:bbgw00542]
D UT28_C0001G0305 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase, UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bbgw00541]
D UT28_C0001G0430 UTP-glucose-1-phosphate uridylyltransferase, UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UT28_C0001G0650 galE; UDP-glucose 4-epimerase, UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UT28_C0001G0405 dTDP-4-dehydrorhamnose reductase, dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D UT28_C0001G0345 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D UT28_C0001G0031 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D UT28_C0001G1021 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UT28_C0001G0134 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase, bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UT28_C0001G0388 dTDP-D-glucose 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D UT28_C0001G0406 UDP-N-acetylglucosamine 2-epimerase, UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D UT28_C0001G0399 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D UT28_C0001G0394 pseudaminic acid CMP-transferase, N-acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
C 00550 Peptidoglycan biosynthesis [PATH:bbgw00550]
D UT28_C0001G0997 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1, UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UT28_C0001G0112 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UT28_C0001G0113 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D UT28_C0001G0116 UDP-N-acetylmuramoylalanine--D-glutamate ligase, UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UT28_C0001G0495 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UT28_C0001G0702 ddl, D-alanyl-alanine synthetase A, D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UT28_C0001G0120 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D UT28_C0001G0118 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UT28_C0001G0114 murG; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase, UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D UT28_C0001G0107 1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UT28_C0001G0694 penicillin-binding protein 2, penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D UT28_C0001G0122 peptidoglycan glycosyltransferase, cell division protein FtsI (penicillin-binding protein 3) K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D UT28_C0001G0601 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:bbgw00552]
D UT28_C0001G0305 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase, UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D UT28_C0001G1002 WecB/TagA/CpsF family glycosyl transferase, N-acetylglucosaminyldiphosphoundecaprenol K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D UT28_C0001G0713 putative LytR family transcriptional protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D UT28_C0001G0809 mgtA; GDP-mannose-dependent alpha-mannosyltransferase MgtA K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bbgw00543]
D UT28_C0001G0305 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase, UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bbgw00730]
D UT28_C0001G0231 cysteine desulfurase NifS, cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UT28_C0001G0768 ribosome-associated GTPase, ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D UT28_C0001G0960 nucleoside-triphosphate--adenylate kinase, adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
C 00750 Vitamin B6 metabolism
D UT28_C0001G0273 threonine synthase, threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism
C 00770 Pantothenate and CoA biosynthesis
C 00780 Biotin metabolism [PATH:bbgw00780]
D UT28_C0001G0504 fabZ; putative beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ, 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis
D UT28_C0001G0560 phhB; pterin-4-alpha-carbinolamine dehydratase, 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
C 00670 One carbon pool by folate [PATH:bbgw00670]
D UT28_C0001G0228 FolD bifunctional protein, methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D UT28_C0001G0784 glyA; serine hydroxymethyltransferase, glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UT28_C0001G0129 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D UT28_C0001G0670 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UT28_C0001G0808 methionyl-tRNA formyltransferase, methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bbgw00860]
D UT28_C0001G0010 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase, cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D UT28_C0001G0405 dTDP-4-dehydrorhamnose reductase, dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D UT28_C0001G0405 dTDP-4-dehydrorhamnose reductase, dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites
D UT28_C0001G0953 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bbgw03020]
D UT28_C0001G0898 rpoB; DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UT28_C0001G0899 DNA-directed RNA polymerase subunit beta', DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UT28_C0001G0058 DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UT28_C0001G0966 rpoA; DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bbgw03010]
D UT28_C0001G0680 rpfA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D UT28_C0001G0194 rpsB; 30S ribosomal protein S2, small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D UT28_C0001G0914 30S ribosomal protein S3, small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D UT28_C0001G0965 30S ribosomal protein S4, small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D UT28_C0001G0925 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D UT28_C0001G0327 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D UT28_C0001G0901 rpsG; 30S ribosomal protein S7, small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D UT28_C0001G0922 30S ribosomal protein S8, small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D UT28_C0001G0969 30S ribosomal protein S9, small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D UT28_C0001G0907 rpsJ; 30S ribosomal protein S10, small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D UT28_C0001G0964 30S ribosomal protein S11, small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D UT28_C0001G0900 rpsL; 30S ribosomal protein S12, small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D UT28_C0001G0963 30S ribosomal protein S13, small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D UT28_C0001G0921 30S ribosomal protein S14P, small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D UT28_C0001G0513 rpsO; 30S ribosomal protein S15, small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D UT28_C0001G0774 30S ribosomal protein S16, small subunit ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D UT28_C0001G0917 rpsQ; ribosomal protein S17 (BS16) K02961 RP-S17; small subunit ribosomal protein S17
D UT28_C0001G0329 rpsR; ribosomal protein S18, small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D UT28_C0001G0912 rpsS; ribosomal protein S19 (BS19) K02965 RP-S19; small subunit ribosomal protein S19
D UT28_C0001G0508 nucleoid protein Hbs, DNA-binding protein HU-beta K02968 RP-S20; small subunit ribosomal protein S20
D UT28_C0001G0004 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D UT28_C0001G0044 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D UT28_C0001G0911 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D UT28_C0001G0908 rplC; 50S ribosomal protein L3, large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D UT28_C0001G0909 50S ribosomal protein L4, large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D UT28_C0001G0920 50S ribosomal protein L5, large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D UT28_C0001G0923 50S ribosomal protein L6, large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D UT28_C0001G0041 50S ribosomal protein L7/L12, large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D UT28_C0001G0225 rplI; 50S ribosomal protein L9, large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D UT28_C0001G0042 50S ribosomal protein L10, large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D UT28_C0001G0061 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D UT28_C0001G0968 50S ribosomal protein L13, large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D UT28_C0001G0918 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D UT28_C0001G0926 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D UT28_C0001G0915 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D UT28_C0001G0967 50S ribosomal protein L17, large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D UT28_C0001G0924 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D UT28_C0001G0296 rplS; 50S ribosomal protein L19, large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D UT28_C0001G0825 ribosomal protein L20, bacterial-type, large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D UT28_C0001G0064 50S ribosomal protein L21, large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D UT28_C0001G0913 rplV; LSU ribosomal protein L22p, L17e K02890 RP-L22; large subunit ribosomal protein L22
D UT28_C0001G0910 50S ribosomal protein L25, large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D UT28_C0001G0919 rplX; 50S ribosomal protein L24, large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D UT28_C0001G0777 rplY; 50S ribosomal protein L25, large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D UT28_C0001G0299 rpmA; 50S ribosomal protein L27, large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D UT28_C0001G0100 ribosomal protein L28, large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D UT28_C0001G0916 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D UT28_C0001G0196 rpmE; 50S ribosomal protein L31, large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D UT28_C0001G0977 50S ribosomal protein L32, large subunit ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D UT28_C0001G0089 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UT28_C0001G0445 50S ribosomal protein L34, large subunit ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D UT28_C0001G0826 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bbgw00970]
D UT28_C0001G0841 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UT28_C0001G0725 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UT28_C0001G0149 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UT28_C0001G0994 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UT28_C0001G0626 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UT28_C0001G0724 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UT28_C0001G0095 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UT28_C0001G0294 gltX; glutamyl-tRNA synthetase, nondiscriminating glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UT28_C0001G0204 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D UT28_C0001G0202 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D UT28_C0001G0205 glutamyl-tRNA(Gln) amidotransferase subunit C, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D UT28_C0001G0685 alanyl-tRNA synthetase, alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UT28_C0001G0131 glycyl-tRNA synthetase, glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D UT28_C0001G0780 threonyl-tRNA synthetase, threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UT28_C0001G0697 serS; seryl-tRNA synthetase, seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UT28_C0001G0052 cysS; cysteinyl-tRNA synthetase, cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UT28_C0001G0240 metG; methionyl-tRNA synthetase, methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UT28_C0001G0808 methionyl-tRNA formyltransferase, methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UT28_C0001G0490 valyl-tRNA synthetase, valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UT28_C0001G0978 leuS; leucyl-tRNA synthetase, leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UT28_C0001G0066 isoleucyl-tRNA synthetase, isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UT28_C0001G0696 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D UT28_C0001G0106 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UT28_C0001G0267 arginyl-tRNA synthetase, arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UT28_C0001G0190 prolyl-tRNA synthetase, prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UT28_C0001G1014 histidyl-tRNA synthetase, histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UT28_C0001G0972 pheS; phenylalanyl-tRNA synthetase subunit alpha, phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UT28_C0001G0973 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UT28_C0001G0264 tyrosyl-tRNA synthetase, tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UT28_C0001G0339 tryptophanyl-tRNA synthetase, tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bbgw03060]
D UT28_C0001G0957 preprotein translocase subunit SecY, preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UT28_C0001G0063 Preprotein translocase subunit SecE, preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UT28_C0001G0667 preprotein translocase subunit SecG, preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UT28_C0001G0032 protein-export membrane protein SecD, preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D UT28_C0001G0033 protein-export membrane protein SecF, preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D UT28_C0001G0442 membrane protein insertase, YidC/Oxa1 family, preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UT28_C0001G0699 Preprotein translocase subunit SecA, preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UT28_C0001G0507 signal peptidase I, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UT28_C0001G0816 putative signal peptidase I, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UT28_C0001G0820 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bbgw04122]
D UT28_C0001G0231 cysteine desulfurase NifS, cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UT28_C0001G0227 mnmA; tRNA-specific 2-thiouridylase MnmA, tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bbgw03018]
D UT28_C0001G0600 eno, phosphopyruvate hydratase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0990 enolase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0514 polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D UT28_C0001G1024 Exoribonuclease R, ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UT28_C0001G0865 putative DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UT28_C0001G0751 HDIG/KH domain-containing protein, uncharacterized protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D UT28_C0001G0519 RNA-metabolising metallo-beta-lactamase, ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UT28_C0001G0633 chaperone protein DnaK, molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UT28_C0001G0336 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bbgw03030]
D UT28_C0001G0300 polymerase III subunit alpha, DNA polymerase III subunit alpha protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UT28_C0001G0250 polymerase III subunit gamma and tau, DNA polymerase III subunit gamma/tau protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UT28_C0001G0098 polymerase III subunit delta', DNA polymerase III subunit delta' protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UT28_C0001G0505 polymerase III subunit delta, DNA polymerase III subunit delta protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UT28_C0001G0453 dnaN; polymerase III subunit beta, DNA polymerase III subunit beta protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UT28_C0001G0248 dnaC1; replicative DNA helicase, replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UT28_C0001G0558 dnaG; primase protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D UT28_C0001G0328 single-strand binding protein, single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UT28_C0001G0067 ribonuclease H, putative phosphoglycerate mutase K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UT28_C0001G0834 Ribonuclease H, ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D UT28_C0001G0209 ligase, NAD-dependent, DNA ligase (NAD+) protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bbgw03410]
D UT28_C0001G0138 mutM; formamidopyrimidine-DNA glycosidase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D UT28_C0001G0518 phage SPO1 DNA polymerase-like protein, DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D UT28_C0001G0110 exonuclease RecJ, single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UT28_C0001G0209 ligase, NAD-dependent, DNA ligase (NAD+) protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bbgw03420]
D UT28_C0001G0830 excinuclease ABC subunit A, excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D UT28_C0001G0181 excinuclease ABC subunit A, excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D UT28_C0001G0188 excinuclease ABC subunit B, excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D UT28_C0001G0178 excinuclease ABC subunit C, excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D UT28_C0001G0017 UvrD/REP helicase, DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UT28_C0001G0245 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UT28_C0001G0209 ligase, NAD-dependent, DNA ligase (NAD+) protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bbgw03430]
D UT28_C0001G0017 UvrD/REP helicase, DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UT28_C0001G0245 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UT28_C0001G0110 exonuclease RecJ, single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UT28_C0001G0328 single-strand binding protein, single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UT28_C0001G0300 polymerase III subunit alpha, DNA polymerase III subunit alpha protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UT28_C0001G0453 dnaN; polymerase III subunit beta, DNA polymerase III subunit beta protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UT28_C0001G0250 polymerase III subunit gamma and tau, DNA polymerase III subunit gamma/tau protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UT28_C0001G0505 polymerase III subunit delta, DNA polymerase III subunit delta protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UT28_C0001G0098 polymerase III subunit delta', DNA polymerase III subunit delta' protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UT28_C0001G0209 ligase, NAD-dependent, DNA ligase (NAD+) protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bbgw03440]
D UT28_C0001G0110 exonuclease RecJ, single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UT28_C0001G0328 single-strand binding protein, single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UT28_C0001G0454 replication and repair protein RecF protein K03629 recF; DNA replication and repair protein RecF
D UT28_C0001G0133 recO; recombination protein RecO, DNA repair protein RecO (recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O)
D UT28_C0001G0054 recombination protein RecR, recombination protein RecR K06187 recR; recombination protein RecR
D UT28_C0001G0545 recA; protein, recombination protein RecA K03553 recA; recombination protein RecA
D UT28_C0001G0641 crossover junction endodeoxyribonuclease RuvC, crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D UT28_C0001G0653 ATP-dependent DNA helicase RecG, ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D UT28_C0001G0300 polymerase III subunit alpha, DNA polymerase III subunit alpha protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UT28_C0001G0453 dnaN; polymerase III subunit beta, DNA polymerase III subunit beta protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UT28_C0001G0250 polymerase III subunit gamma and tau, DNA polymerase III subunit gamma/tau protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UT28_C0001G0505 polymerase III subunit delta, DNA polymerase III subunit delta protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UT28_C0001G0098 polymerase III subunit delta', DNA polymerase III subunit delta' protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UT28_C0001G0810 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:bbgw03450]
D UT28_C0001G0606 repair protein, DNA end-binding protein Ku protein K10979 ku; DNA end-binding protein Ku
D UT28_C0001G0604 ATP-dependent DNA ligase, DNA ligase (ATP) K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D UT28_C0001G0605 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bbgw02010]
D UT28_C0001G0706 membrane protein of unknown function K09811 ftsX; cell division transport system permease protein
D UT28_C0001G0705 ftsE; cell division ATPase, cell division transport system ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:bbgw03070]
D UT28_C0001G0080 pilB1; type IV-A pilus assembly ATPase PilB, type IV pilus assembly protein PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D UT28_C0001G0032 protein-export membrane protein SecD, preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D UT28_C0001G0033 protein-export membrane protein SecF, preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D UT28_C0001G0063 Preprotein translocase subunit SecE, preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UT28_C0001G0667 preprotein translocase subunit SecG, preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UT28_C0001G0957 preprotein translocase subunit SecY, preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UT28_C0001G0442 membrane protein insertase, YidC/Oxa1 family, preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UT28_C0001G0699 Preprotein translocase subunit SecA, preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bbgw02020]
D UT28_C0001G0200 putative HtrA2 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UT28_C0001G0452 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D UT28_C0001G0260 hypothetical protein K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D UT28_C0001G0868 putative Histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D UT28_C0001G0043 hypothetical protein K03563 csrA; carbon storage regulator
D UT28_C0001G0077 prepilin peptidase dependent protein D, type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D UT28_C0001G0534 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D UT28_C0001G0074 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bbgw02024]
D UT28_C0001G0868 putative Histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D UT28_C0001G0668 putative ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D UT28_C0001G0442 membrane protein insertase, YidC/Oxa1 family, preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UT28_C0001G0063 Preprotein translocase subunit SecE, preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UT28_C0001G0667 preprotein translocase subunit SecG, preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UT28_C0001G0957 preprotein translocase subunit SecY, preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UT28_C0001G0699 Preprotein translocase subunit SecA, preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D UT28_C0001G0559 RpoD subfamily RNA polymerase sigma-70 subunit, RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D UT28_C0001G0600 eno, phosphopyruvate hydratase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0990 enolase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bbgw01501]
D UT28_C0001G0107 1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UT28_C0001G0694 penicillin-binding protein 2, penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bbgw01502]
D UT28_C0001G0702 ddl, D-alanyl-alanine synthetase A, D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UT28_C0001G0120 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D UT28_C0001G0118 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UT28_C0001G0114 murG; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase, UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D UT28_C0001G0200 putative HtrA2 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bbgw01000]
C 01001 Protein kinases [BR:bbgw01001]
D UT28_C0001G0868 putative Histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins
C 01002 Peptidases and inhibitors [BR:bbgw01002]
D UT28_C0001G0820 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D UT28_C0001G0075 peptidase A24A domain-containing protein, leader peptidase (prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UT28_C0001G0707 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D UT28_C0001G0673 amidophosphoribosyltransferase, amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D UT28_C0001G0995 putative sortase K07284 srtA; sortase A [EC:3.4.22.70]
D UT28_C0001G0575 putative sortase K07284 srtA; sortase A [EC:3.4.22.70]
D UT28_C0001G0571 peptidase C60 family protein K07284 srtA; sortase A [EC:3.4.22.70]
D UT28_C0001G0270 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D UT28_C0001G0961 methionine aminopeptidase, methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D UT28_C0001G0589 ATP-dependent metalloprotease FtsH, cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UT28_C0001G0213 HtpX2, heat shock protein HtpX, heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D UT28_C0001G0191 putative membrane-associated zinc metalloprotease, regulator of sigma E protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D UT28_C0001G0200 putative HtrA2 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UT28_C0001G0601 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UT28_C0001G0161 ATP-dependent Clp protease, proteolytic subunit ClpP, ATP-dependent Clp protease, protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D UT28_C0001G1018 LexA repressor, repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D UT28_C0001G0507 signal peptidase I, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UT28_C0001G0816 putative signal peptidase I, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UT28_C0001G0226 ctpA; carboxy-terminal-processing protease, carboxyl-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D UT28_C0001G0855 putative peptidase, dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D UT28_C0001G0765 peptidase S51 dipeptidase E, dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
C 01003 Glycosyltransferases [BR:bbgw01003]
D UT28_C0001G0359 glycosyl transferase family protein K00729 ALG5; dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117]
D UT28_C0001G0809 mgtA; GDP-mannose-dependent alpha-mannosyltransferase MgtA K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D UT28_C0001G0648 glycogen/starch synthase, starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D UT28_C0001G0651 glycogen/starch synthase, starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D UT28_C0001G0107 1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UT28_C0001G1002 WecB/TagA/CpsF family glycosyl transferase, N-acetylglucosaminyldiphosphoundecaprenol K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D UT28_C0001G0305 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase, UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D UT28_C0001G0643 family 2 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bbgw01005]
D UT28_C0001G0305 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase, UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bbgw01011]
D UT28_C0001G0997 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1, UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UT28_C0001G0112 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UT28_C0001G0113 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D UT28_C0001G0116 UDP-N-acetylmuramoylalanine--D-glutamate ligase, UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UT28_C0001G0495 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UT28_C0001G0702 ddl, D-alanyl-alanine synthetase A, D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UT28_C0001G0132 glutamate racemase, glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D UT28_C0001G0118 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UT28_C0001G0114 murG; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase, UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D UT28_C0001G0593 integral membrane protein MviN, virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D UT28_C0001G0107 1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UT28_C0001G0694 penicillin-binding protein 2, penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D UT28_C0001G0122 peptidoglycan glycosyltransferase, cell division protein FtsI (penicillin-binding protein 3) K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D UT28_C0001G0601 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UT28_C0001G0707 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D UT28_C0001G0995 putative sortase K07284 srtA; sortase A [EC:3.4.22.70]
D UT28_C0001G0575 putative sortase K07284 srtA; sortase A [EC:3.4.22.70]
D UT28_C0001G0571 peptidase C60 family protein K07284 srtA; sortase A [EC:3.4.22.70]
D UT28_C0001G0684 lytic transglycosylase catalytic subunit, soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D UT28_C0001G0690 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:bbgw01004]
D UT28_C0001G0503 fabH; 3-oxoacyl-(acyl carrier protein) synthase III, 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D UT28_C0001G0504 fabZ; putative beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ, 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D UT28_C0001G0986 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D UT28_C0001G0493 hypothetical protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D UT28_C0001G0383 1-acyl-sn-glycerol-3-phosphate acyltransferase, 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:bbgw01006]
D UT28_C0001G0661 tRNA delta(2)-isopentenylpyrophosphate transferase, tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:bbgw01007]
D UT28_C0001G0696 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D UT28_C0001G0294 gltX; glutamyl-tRNA synthetase, nondiscriminating glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UT28_C0001G0264 tyrosyl-tRNA synthetase, tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UT28_C0001G0339 tryptophanyl-tRNA synthetase, tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D UT28_C0001G0052 cysS; cysteinyl-tRNA synthetase, cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UT28_C0001G0106 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UT28_C0001G0267 arginyl-tRNA synthetase, arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UT28_C0001G0240 metG; methionyl-tRNA synthetase, methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UT28_C0001G0066 isoleucyl-tRNA synthetase, isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UT28_C0001G0490 valyl-tRNA synthetase, valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UT28_C0001G0978 leuS; leucyl-tRNA synthetase, leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UT28_C0001G1014 histidyl-tRNA synthetase, histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UT28_C0001G0131 glycyl-tRNA synthetase, glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D UT28_C0001G0697 serS; seryl-tRNA synthetase, seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UT28_C0001G0190 prolyl-tRNA synthetase, prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UT28_C0001G0780 threonyl-tRNA synthetase, threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UT28_C0001G0685 alanyl-tRNA synthetase, alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UT28_C0001G0972 pheS; phenylalanyl-tRNA synthetase subunit alpha, phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UT28_C0001G0973 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UT28_C0001G0385 LL-diaminopimelate aminotransferase, LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bbgw00194]
D UT28_C0001G0471 atpC; F0F1 ATP synthase subunit epsilon, F-type H+-transporting ATPase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D UT28_C0001G0472 F0F1 ATP synthase subunit beta, F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D UT28_C0001G0473 ATP synthase F1 subunit gamma, F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D UT28_C0001G0475 ATP synthase F1 subunit alpha, F-type H+-transporting ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D UT28_C0001G0476 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D UT28_C0001G0477 atpF; F0F1-type ATP synthase subunit b, F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UT28_C0001G0478 atpE; ATP synthase subunit c, F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D UT28_C0001G0479 atpB; ATP synthase F0 subunit A, F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bbgw03000]
D UT28_C0001G0839 regulatory protein ArsR, ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D UT28_C0001G0410 transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D UT28_C0001G0446 transcriptional regulator TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D UT28_C0001G0449 transcriptional regulator TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D UT28_C0001G0457 transcriptional regulator TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D UT28_C0001G0501 transcriptional regulator TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D UT28_C0001G0524 transcriptional regulator TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D UT28_C0001G0425 transcriptional regulator TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D UT28_C0001G0220 transcriptional regulator CdaR, carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator
D UT28_C0001G0842 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D UT28_C0001G0974 paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX), phenylacetic acid degradation operon negative regulatory protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D UT28_C0001G0281 PaaX family transcriptional regulator, phenylacetic acid degradation operon negative regulatory protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D UT28_C0001G0733 putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D UT28_C0001G0819 DnaK suppressor protein-like protein K06204 dksA; RNA polymerase-binding transcription factor
D UT28_C0001G0125 mraZ; protein MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:bbgw03021]
D UT28_C0001G0058 DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UT28_C0001G0966 rpoA; DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UT28_C0001G0898 rpoB; DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UT28_C0001G0899 DNA-directed RNA polymerase subunit beta', DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UT28_C0001G0559 RpoD subfamily RNA polymerase sigma-70 subunit, RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D UT28_C0001G1005 sigma-B/F/G subfamily RNA polymerase sigma-28 factor, RNA polymerase sigma-B factor K03090 sigB; RNA polymerase sigma-B factor
D UT28_C0001G1006 NusA antitermination factor, N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D UT28_C0001G0976 putative transcription termination factor K03625 nusB; transcription antitermination protein NusB
D UT28_C0001G0062 nusG; transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D UT28_C0001G0206 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D UT28_C0001G0207 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D UT28_C0001G0819 DnaK suppressor protein-like protein K06204 dksA; RNA polymerase-binding transcription factor
D UT28_C0001G0695 transcription elongation factor GreA, transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D UT28_C0001G0283 hypothetical protein K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:bbgw03019]
D UT28_C0001G0975 putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UT28_C0001G0519 RNA-metabolising metallo-beta-lactamase, ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UT28_C0001G0751 HDIG/KH domain-containing protein, uncharacterized protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D UT28_C0001G1024 Exoribonuclease R, ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UT28_C0001G0865 putative DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UT28_C0001G0600 eno, phosphopyruvate hydratase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0990 enolase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0514 polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D UT28_C0001G0633 chaperone protein DnaK, molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UT28_C0001G0336 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UT28_C0001G0043 hypothetical protein K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:bbgw03011]
D UT28_C0001G0680 rpfA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D UT28_C0001G0194 rpsB; 30S ribosomal protein S2, small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D UT28_C0001G0914 30S ribosomal protein S3, small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D UT28_C0001G0965 30S ribosomal protein S4, small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D UT28_C0001G0925 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D UT28_C0001G0327 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D UT28_C0001G0901 rpsG; 30S ribosomal protein S7, small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D UT28_C0001G0922 30S ribosomal protein S8, small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D UT28_C0001G0969 30S ribosomal protein S9, small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D UT28_C0001G0907 rpsJ; 30S ribosomal protein S10, small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D UT28_C0001G0964 30S ribosomal protein S11, small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D UT28_C0001G0900 rpsL; 30S ribosomal protein S12, small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D UT28_C0001G0963 30S ribosomal protein S13, small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D UT28_C0001G0921 30S ribosomal protein S14P, small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D UT28_C0001G0513 rpsO; 30S ribosomal protein S15, small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D UT28_C0001G0774 30S ribosomal protein S16, small subunit ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D UT28_C0001G0917 rpsQ; ribosomal protein S17 (BS16) K02961 RP-S17; small subunit ribosomal protein S17
D UT28_C0001G0329 rpsR; ribosomal protein S18, small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D UT28_C0001G0912 rpsS; ribosomal protein S19 (BS19) K02965 RP-S19; small subunit ribosomal protein S19
D UT28_C0001G0508 nucleoid protein Hbs, DNA-binding protein HU-beta K02968 RP-S20; small subunit ribosomal protein S20
D UT28_C0001G0004 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D UT28_C0001G0044 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D UT28_C0001G0911 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D UT28_C0001G0908 rplC; 50S ribosomal protein L3, large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D UT28_C0001G0909 50S ribosomal protein L4, large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D UT28_C0001G0920 50S ribosomal protein L5, large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D UT28_C0001G0923 50S ribosomal protein L6, large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D UT28_C0001G0225 rplI; 50S ribosomal protein L9, large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D UT28_C0001G0042 50S ribosomal protein L10, large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D UT28_C0001G0061 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D UT28_C0001G0041 50S ribosomal protein L7/L12, large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D UT28_C0001G0968 50S ribosomal protein L13, large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D UT28_C0001G0918 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D UT28_C0001G0926 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D UT28_C0001G0915 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D UT28_C0001G0967 50S ribosomal protein L17, large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D UT28_C0001G0924 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D UT28_C0001G0296 rplS; 50S ribosomal protein L19, large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D UT28_C0001G0825 ribosomal protein L20, bacterial-type, large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D UT28_C0001G0064 50S ribosomal protein L21, large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D UT28_C0001G0913 rplV; LSU ribosomal protein L22p, L17e K02890 RP-L22; large subunit ribosomal protein L22
D UT28_C0001G0910 50S ribosomal protein L25, large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D UT28_C0001G0919 rplX; 50S ribosomal protein L24, large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D UT28_C0001G0299 rpmA; 50S ribosomal protein L27, large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D UT28_C0001G0100 ribosomal protein L28, large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D UT28_C0001G0916 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D UT28_C0001G0196 rpmE; 50S ribosomal protein L31, large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D UT28_C0001G0977 50S ribosomal protein L32, large subunit ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D UT28_C0001G0089 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UT28_C0001G0445 50S ribosomal protein L34, large subunit ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D UT28_C0001G0826 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D UT28_C0001G0777 rplY; 50S ribosomal protein L25, large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:bbgw03009]
D UT28_C0001G0975 putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UT28_C0001G0893 GTP-binding protein Obg/CgtA, GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D UT28_C0001G0819 DnaK suppressor protein-like protein K06204 dksA; RNA polymerase-binding transcription factor
D UT28_C0001G1006 NusA antitermination factor, N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D UT28_C0001G0976 putative transcription termination factor K03625 nusB; transcription antitermination protein NusB
D UT28_C0001G0062 nusG; transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D UT28_C0001G0242 ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D UT28_C0001G0124 mraW; S-adenosyl-methyltransferase MraW, 16S rRNA (cytosine1402-N4)-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D UT28_C0001G0023 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D UT28_C0001G0734 rluF; pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D UT28_C0001G0689 Holliday junction resolvase-like protein, putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D UT28_C0001G0865 putative DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UT28_C0001G0768 ribosome-associated GTPase, ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D UT28_C0001G0060 rimN; putative ribosome maturation factor tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D UT28_C0001G0970 ribosome-binding factor A, ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D UT28_C0001G0006 hypothetical protein K07042 ybeY; probable rRNA maturation factor
C 03016 Transfer RNA biogenesis [BR:bbgw03016]
D UT28_C0001G0596 pcnB; tRNA nucleotidyltransferase/poly(A) polymerase, poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D UT28_C0001G0190 prolyl-tRNA synthetase, prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UT28_C0001G0066 isoleucyl-tRNA synthetase, isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UT28_C0001G0978 leuS; leucyl-tRNA synthetase, leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UT28_C0001G0240 metG; methionyl-tRNA synthetase, methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UT28_C0001G0106 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UT28_C0001G0267 arginyl-tRNA synthetase, arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UT28_C0001G0685 alanyl-tRNA synthetase, alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UT28_C0001G0131 glycyl-tRNA synthetase, glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D UT28_C0001G0780 threonyl-tRNA synthetase, threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UT28_C0001G0697 serS; seryl-tRNA synthetase, seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UT28_C0001G0052 cysS; cysteinyl-tRNA synthetase, cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UT28_C0001G0490 valyl-tRNA synthetase, valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UT28_C0001G1014 histidyl-tRNA synthetase, histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UT28_C0001G0972 pheS; phenylalanyl-tRNA synthetase subunit alpha, phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UT28_C0001G0973 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UT28_C0001G0264 tyrosyl-tRNA synthetase, tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UT28_C0001G0339 tryptophanyl-tRNA synthetase, tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D UT28_C0001G0001 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D UT28_C0001G0093 ine13; tRNA pseudouridine synthase D TruD, tRNA pseudouridsynthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D UT28_C0001G0231 cysteine desulfurase NifS, cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UT28_C0001G0060 rimN; putative ribosome maturation factor tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D UT28_C0001G0661 tRNA delta(2)-isopentenylpyrophosphate transferase, tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D UT28_C0001G0444 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D UT28_C0001G0696 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D UT28_C0001G0294 gltX; glutamyl-tRNA synthetase, nondiscriminating glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UT28_C0001G0778 tRNA-I(6)A37 thiotransferase enzyme MiaB, bifunctional enzyme involved in thiolation and methylation of tRNA K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D UT28_C0001G0776 ine37; tRNA (guanine-N1)-methyltransferase, tRNA (guanine37-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D UT28_C0001G0227 mnmA; tRNA-specific 2-thiouridylase MnmA, tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D UT28_C0001G0039 tgt, queuine tRNA-ribosyltransferase, queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D UT28_C0001G0712 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D UT28_C0001G0711 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D UT28_C0001G1024 Exoribonuclease R, ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UT28_C0001G0514 polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bbgw03012]
D UT28_C0001G0887 infB; translation initiation factor IF-2, translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D UT28_C0001G0827 translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D UT28_C0001G0193 Translation elongation factor EFTs/EF1B dimerization, elongation factor Ts K02357 tsf; elongation factor Ts
D UT28_C0001G0906 elongation factor Tu, elongation factor Tu K02358 tuf; elongation factor Tu
D UT28_C0001G0903 elongation factor G, elongation factor G K02355 fusA; elongation factor G
D UT28_C0001G0197 peptide chain release factor 1, peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D UT28_C0001G0192 frr, ribosome recycling factor, ribosome recycling factor K02838 frr; ribosome recycling factor
D UT28_C0001G0198 protein-(glutamine-N5) methyltransferase, release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D UT28_C0001G0045 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D UT28_C0001G0962 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D UT28_C0001G0330 elongation factor P K02356 efp; elongation factor P
D UT28_C0001G0048 peptide chain release factor 2 (bRF-2), peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bbgw03110]
D UT28_C0001G1007 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D UT28_C0001G0152 hypothetical protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D UT28_C0001G0633 chaperone protein DnaK, molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UT28_C0001G0336 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UT28_C0001G0631 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein
D UT28_C0001G0636 molecular chaperone GrpE (heat shock protein), molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D UT28_C0001G0429 hypothetical protein K13993 HSP20; HSP20 family protein
D UT28_C0001G0773 heat shock protein Hsp20, HSP20 family protein K13993 HSP20; HSP20 family protein
D UT28_C0001G0337 chaperonin Cpn10, chaperonin GroES K04078 groES; chaperonin GroES
D UT28_C0001G0200 putative HtrA2 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UT28_C0001G0589 ATP-dependent metalloprotease FtsH, cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UT28_C0001G0479 atpB; ATP synthase F0 subunit A, F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UT28_C0001G0715 prsA; Foldase protein PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D UT28_C0001G0014 thioredoxin K03671 TXN; thioredoxin
D UT28_C0001G0302 Glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
D UT28_C0001G0740 glutaredoxin-like protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:bbgw04131]
D UT28_C0001G0306 nucleoside diphosphate kinase, nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UT28_C0001G0103 hypothetical protein K07192 FLOT; flotillin
D UT28_C0001G0170 glyceraldehyde-3-phosphate dehydrogenase, type I, glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UT28_C0001G0599 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (phosphoglyceromutase) (pgam), bpg-dependent pgam, dpgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D UT28_C0001G0727 pyruvate kinase, pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:bbgw03032]
D UT28_C0001G0067 ribonuclease H, putative phosphoglycerate mutase K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UT28_C0001G0942 ATPase AAA K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D UT28_C0001G0752 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D UT28_C0001G0452 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D UT28_C0001G0248 dnaC1; replicative DNA helicase, replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UT28_C0001G0558 dnaG; primase protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D UT28_C0001G0328 single-strand binding protein, single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UT28_C0001G0300 polymerase III subunit alpha, DNA polymerase III subunit alpha protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UT28_C0001G0453 dnaN; polymerase III subunit beta, DNA polymerase III subunit beta protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UT28_C0001G0505 polymerase III subunit delta, DNA polymerase III subunit delta protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UT28_C0001G0098 polymerase III subunit delta', DNA polymerase III subunit delta' protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UT28_C0001G0250 polymerase III subunit gamma and tau, DNA polymerase III subunit gamma/tau protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UT28_C0001G0834 Ribonuclease H, ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D UT28_C0001G0209 ligase, NAD-dependent, DNA ligase (NAD+) protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D UT28_C0001G0885 gyrA; gyrase (subunit A) protein K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D UT28_C0001G0883 gyrase subunit B, DNA gyrase subunit B protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D UT28_C0001G0055 topoisomerase I, DNA topoisomerase I protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bbgw03036]
D UT28_C0001G0975 putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UT28_C0001G0103 hypothetical protein K07192 FLOT; flotillin
D UT28_C0001G0752 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D UT28_C0001G0631 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein
D UT28_C0001G0452 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D UT28_C0001G0007 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UT28_C0001G0687 Actin-like protein ATPase involved in cell division-like protein K03590 ftsA; cell division protein FtsA
D UT28_C0001G0705 ftsE; cell division ATPase, cell division transport system ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D UT28_C0001G0527 putative cell division FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D UT28_C0001G0111 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D UT28_C0001G0115 FtsW, cell division membrane protein, cell division protein FtsW K03588 ftsW; cell division protein FtsW
D UT28_C0001G0706 membrane protein of unknown function K09811 ftsX; cell division transport system permease protein
D UT28_C0001G0008 FtsZ, cell division protein FtsZ, cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UT28_C0001G0691 rod shape-determining protein MreB, rod shape-determining protein MreB-related protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UT28_C0001G0998 rod shape-determining protein MreB, rod shape-determining protein MreB-related protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UT28_C0001G0692 mreC; rod shape-determining protein MreC, rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D UT28_C0001G0693 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D UT28_C0001G0065 rod shape-determining protein RodA, rod shape determining protein RodA K05837 rodA; rod shape determining protein RodA
D UT28_C0001G0316 xerD; putative Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD
C 03400 DNA repair and recombination proteins [BR:bbgw03400]
D UT28_C0001G0333 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D UT28_C0001G0029 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UT28_C0001G0832 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UT28_C0001G0787 deoxyuridine 5-triphosphate nucleotidohydrolase, dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D UT28_C0001G0518 phage SPO1 DNA polymerase-like protein, DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D UT28_C0001G0138 mutM; formamidopyrimidine-DNA glycosidase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D UT28_C0001G0110 exonuclease RecJ, single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UT28_C0001G0209 ligase, NAD-dependent, DNA ligase (NAD+) protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D UT28_C0001G0830 excinuclease ABC subunit A, excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D UT28_C0001G0181 excinuclease ABC subunit A, excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D UT28_C0001G0188 excinuclease ABC subunit B, excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D UT28_C0001G0178 excinuclease ABC subunit C, excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D UT28_C0001G0017 UvrD/REP helicase, DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UT28_C0001G0245 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UT28_C0001G0898 rpoB; DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UT28_C0001G0899 DNA-directed RNA polymerase subunit beta', DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UT28_C0001G0058 DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UT28_C0001G0966 rpoA; DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UT28_C0001G0300 polymerase III subunit alpha, DNA polymerase III subunit alpha protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UT28_C0001G0453 dnaN; polymerase III subunit beta, DNA polymerase III subunit beta protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UT28_C0001G0505 polymerase III subunit delta, DNA polymerase III subunit delta protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UT28_C0001G0098 polymerase III subunit delta', DNA polymerase III subunit delta' protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UT28_C0001G0250 polymerase III subunit gamma and tau, DNA polymerase III subunit gamma/tau protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UT28_C0001G0328 single-strand binding protein, single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UT28_C0001G0545 recA; protein, recombination protein RecA K03553 recA; recombination protein RecA
D UT28_C0001G0641 crossover junction endodeoxyribonuclease RuvC, crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D UT28_C0001G0810 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D UT28_C0001G0109 repair protein RadA, DNA repair protein RadA/Sms protein K04485 radA; DNA repair protein RadA/Sms
D UT28_C0001G0454 replication and repair protein RecF protein K03629 recF; DNA replication and repair protein RecF
D UT28_C0001G0653 ATP-dependent DNA helicase RecG, ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D UT28_C0001G0133 recO; recombination protein RecO, DNA repair protein RecO (recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O)
D UT28_C0001G0054 recombination protein RecR, recombination protein RecR K06187 recR; recombination protein RecR
D UT28_C0001G0606 repair protein, DNA end-binding protein Ku protein K10979 ku; DNA end-binding protein Ku
D UT28_C0001G0604 ATP-dependent DNA ligase, DNA ligase (ATP) K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D UT28_C0001G0605 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D UT28_C0001G0885 gyrA; gyrase (subunit A) protein K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D UT28_C0001G0883 gyrase subunit B, DNA gyrase subunit B protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D UT28_C0001G0055 topoisomerase I, DNA topoisomerase I protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D UT28_C0001G0752 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D UT28_C0001G1026 DNA-directed DNA polymerase, DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D UT28_C0001G1018 LexA repressor, repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D UT28_C0001G0546 recX; regulatory protein RecX K03565 recX; regulatory protein
D UT28_C0001G0704 hypothetical protein K02347 polX; DNA polymerase (family X)
D UT28_C0001G0009 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UT28_C0001G0682 phosphoesterase RecJ domain-containing protein, phosphoesterase RecJ domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:bbgw03029]
D UT28_C0001G0887 infB; translation initiation factor IF-2, translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D UT28_C0001G0827 translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D UT28_C0001G0193 Translation elongation factor EFTs/EF1B dimerization, elongation factor Ts K02357 tsf; elongation factor Ts
D UT28_C0001G0906 elongation factor Tu, elongation factor Tu K02358 tuf; elongation factor Tu
D UT28_C0001G0903 elongation factor G, elongation factor G K02355 fusA; elongation factor G
D UT28_C0001G0264 tyrosyl-tRNA synthetase, tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UT28_C0001G0978 leuS; leucyl-tRNA synthetase, leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UT28_C0001G0131 glycyl-tRNA synthetase, glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D UT28_C0001G0106 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UT28_C0001G0267 arginyl-tRNA synthetase, arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UT28_C0001G0204 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D UT28_C0001G0202 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D UT28_C0001G0205 glutamyl-tRNA(Gln) amidotransferase subunit C, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D UT28_C0001G0942 ATPase AAA K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D UT28_C0001G0328 single-strand binding protein, single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UT28_C0001G0633 chaperone protein DnaK, molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UT28_C0001G0636 molecular chaperone GrpE (heat shock protein), molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D UT28_C0001G0336 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UT28_C0001G0337 chaperonin Cpn10, chaperonin GroES K04078 groES; chaperonin GroES
D UT28_C0001G0231 cysteine desulfurase NifS, cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UT28_C0001G0442 membrane protein insertase, YidC/Oxa1 family, preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bbgw02000]
D UT28_C0001G0431 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D UT28_C0001G0668 putative ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D UT28_C0001G0731 ABC-2 type transporter K25147 berB; beta-exotoxin I transport system permease protein
D UT28_C0001G0730 ABC transporter-like protein, antibiotic transport system ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D UT28_C0001G0706 membrane protein of unknown function K09811 ftsX; cell division transport system permease protein
D UT28_C0001G0705 ftsE; cell division ATPase, cell division transport system ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D UT28_C0001G0748 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein
D UT28_C0001G0747 ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein
D UT28_C0001G0749 ABC transporter ATPase K25156 evrA; viologen exporter family transport system ATP-binding protein
D UT28_C0001G0849 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UT28_C0001G0760 permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UT28_C0001G0848 ABC transporter, ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UT28_C0001G0759 ABC transporter-like protein, antibiotic transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UT28_C0001G0871 ABC transporter permease, putative ABC transport system permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D UT28_C0001G0553 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D UT28_C0001G0872 ABC transporter-like protein, putative ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D UT28_C0001G0554 ABC transporter ATP-binding protein, putative ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D UT28_C0001G0618 zinc/iron permease K16267 zipB; zinc and cadmium transporter
D UT28_C0001G0046 zinc/iron permease, zinc transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D UT28_C0001G0390 hypothetical protein K06216 rbsU; putative ribose uptake protein
D UT28_C0001G0593 integral membrane protein MviN, virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D UT28_C0001G0115 FtsW, cell division membrane protein, cell division protein FtsW K03588 ftsW; cell division protein FtsW
D UT28_C0001G0355 hppA; membrane-bound proton-translocating pyrophosphatase, K(+)-stimulated pyrophosphate-energized sodium pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
C 02044 Secretion system [BR:bbgw02044]
D UT28_C0001G0080 pilB1; type IV-A pilus assembly ATPase PilB, type IV pilus assembly protein PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D UT28_C0001G0075 peptidase A24A domain-containing protein, leader peptidase (prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UT28_C0001G0077 prepilin peptidase dependent protein D, type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D UT28_C0001G0534 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D UT28_C0001G0074 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D UT28_C0001G0251 type II secretion system protein E (GspE), type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D UT28_C0001G0437 gspE; general secretion pathway protein E, general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB
D UT28_C0001G0536 type IV-A pilus assembly ATPase PilB, type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D UT28_C0001G0537 Type II secretion system F domain-containing protein, type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D UT28_C0001G0252 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D UT28_C0001G0257 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D UT28_C0001G0542 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D UT28_C0001G0258 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D UT28_C0001G0079 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D UT28_C0001G0654 competence protein ComEA, competence protein ComEA K02237 comEA; competence protein ComEA
D UT28_C0001G0785 CMP/dCMP deaminase zinc-binding protein, dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D UT28_C0001G0637 ComEC/Rec2-like protein, competence protein ComEC K02238 comEC; competence protein ComEC
D UT28_C0001G0638 internalization-like protein competence protein ComEC/Rec2, competence protein ComEC protein K02238 comEC; competence protein ComEC
D UT28_C0001G0699 Preprotein translocase subunit SecA, preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UT28_C0001G0032 protein-export membrane protein SecD, preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D UT28_C0001G0063 Preprotein translocase subunit SecE, preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UT28_C0001G0033 protein-export membrane protein SecF, preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D UT28_C0001G0667 preprotein translocase subunit SecG, preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UT28_C0001G0957 preprotein translocase subunit SecY, preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UT28_C0001G0442 membrane protein insertase, YidC/Oxa1 family, preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system [BR:bbgw02022]
D UT28_C0001G0260 hypothetical protein K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D UT28_C0001G0868 putative Histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:bbgw02035]
D UT28_C0001G0079 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D UT28_C0001G0077 prepilin peptidase dependent protein D, type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D UT28_C0001G0534 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D UT28_C0001G0074 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D UT28_C0001G0251 type II secretion system protein E (GspE), type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D UT28_C0001G0437 gspE; general secretion pathway protein E, general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB
D UT28_C0001G0536 type IV-A pilus assembly ATPase PilB, type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D UT28_C0001G0537 Type II secretion system F domain-containing protein, type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D UT28_C0001G0252 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D UT28_C0001G0075 peptidase A24A domain-containing protein, leader peptidase (prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UT28_C0001G0258 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D UT28_C0001G0257 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D UT28_C0001G0542 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bbgw04812]
D UT28_C0001G0691 rod shape-determining protein MreB, rod shape-determining protein MreB-related protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UT28_C0001G0998 rod shape-determining protein MreB, rod shape-determining protein MreB-related protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UT28_C0001G0008 FtsZ, cell division protein FtsZ, cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UT28_C0001G0007 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UT28_C0001G0687 Actin-like protein ATPase involved in cell division-like protein K03590 ftsA; cell division protein FtsA
C 04147 Exosome [BR:bbgw04147]
D UT28_C0001G0600 eno, phosphopyruvate hydratase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0990 enolase, enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UT28_C0001G0170 glyceraldehyde-3-phosphate dehydrogenase, type I, glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UT28_C0001G0164 phosphoglycerate kinase, phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UT28_C0001G0727 pyruvate kinase, pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UT28_C0001G0103 hypothetical protein K07192 FLOT; flotillin
D UT28_C0001G0336 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UT28_C0001G0633 chaperone protein DnaK, molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UT28_C0001G0906 elongation factor Tu, elongation factor Tu K02358 tuf; elongation factor Tu
D UT28_C0001G0001 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D UT28_C0001G0960 nucleoside-triphosphate--adenylate kinase, adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UT28_C0001G0560 phhB; pterin-4-alpha-carbinolamine dehydratase, 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D UT28_C0001G0670 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UT28_C0001G0175 tpiA; triosephosphate isomerase, triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UT28_C0001G0599 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (phosphoglyceromutase) (pgam), bpg-dependent pgam, dpgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bbgw02048]
D UT28_C0001G0733 putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D UT28_C0001G0008 FtsZ, cell division protein FtsZ, cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UT28_C0001G0691 rod shape-determining protein MreB, rod shape-determining protein MreB-related protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UT28_C0001G0998 rod shape-determining protein MreB, rod shape-determining protein MreB-related protein K03569 mreB; rod shape-determining protein MreB and related proteins
D UT28_C0001G0231 cysteine desulfurase NifS, cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bbgw01504]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bbgw03100]
D UT28_C0001G0841 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UT28_C0001G0725 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UT28_C0001G0149 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UT28_C0001G0994 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UT28_C0001G0626 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UT28_C0001G0724 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UT28_C0001G0095 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D UT28_C0001G0798 methionine sulfoxide reductase A, peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D UT28_C0001G0797 msrB; peptide methionine sulfoxide reductase, peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D UT28_C0001G0814 radical SAM protein, pyruvate formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D UT28_C0001G0818 prolipoprotein diacylglyceryl transferase, phosphatidylglycerol:prolipoprotein diacylglycerol transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D UT28_C0001G0890 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D UT28_C0001G0318 hypothetical protein K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D UT28_C0001G0238 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D UT28_C0001G0566 translation initiation inhibitor, TdcF protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D UT28_C0001G0565 putative Alpha/beta fold family hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D UT28_C0001G0927 UV damage endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D UT28_C0001G0612 P-type HAD superfamily ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D UT28_C0001G0660 P-type HAD superfamily ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D UT28_C0001G0287 frx-6, ferredoxin family protein, ferredoxin K05337 fer; ferredoxin
D UT28_C0001G0628 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D UT28_C0001G0230 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D UT28_C0001G0793 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D UT28_C0001G0162 tig, trigger factor, trigger factor K03545 tig; trigger factor
D UT28_C0001G0788 smpB; ssrA RNA (tmRNA)-binding protein, SsrA-binding protein K03664 smpB; SsrA-binding protein
D UT28_C0001G0663 Mg chelatase, subunit ChlI, magnesium chelatase family protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D UT28_C0001G0295 hypothetical protein K07460 yraN; putative endonuclease
D UT28_C0001G0517 excinuclease ABC subunit C, putative endonuclease K07461 K07461; putative endonuclease
D UT28_C0001G0366 excinuclease ABC C subunit domain-containing protein, putative endonuclease K07461 K07461; putative endonuclease
D UT28_C0001G0236 hypothetical protein K07465 K07465; putative RecB family exonuclease
D UT28_C0001G0056 protecting protein DprA, DNA processing protein K04096 smf; DNA processing protein
D UT28_C0001G1036 rarA; recombination factor protein RarA, putative ATPase K07478 ycaJ; putative ATPase
D UT28_C0001G1016 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D UT28_C0001G0128 transposase IS200-family protein, putative transposase K07491 rayT; REP-associated tyrosine transposase
D UT28_C0001G0897 transposase K07491 rayT; REP-associated tyrosine transposase
D UT28_C0001G1032 transposase IS200-family protein, putative transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D UT28_C0001G0047 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
D UT28_C0001G0441 spoII; single-stranded nucleic acid binding R3H domain-containing protein, spoIIIJ-associated protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D UT28_C0001G0737 bipA; GTP-binding protein K06207 typA; GTP-binding protein
C 99992 Structural proteins
C 99994 Others
D UT28_C0001G0025 hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D UT28_C0001G0657 hypothetical protein K06878 K06878; tRNA-binding protein
D UT28_C0001G0801 Membrane protein containing DUF457, transmembrane K07038 K07038; inner membrane protein
D UT28_C0001G0815 hypothetical protein K07100 K07100; putative phosphoribosyl transferase
D UT28_C0001G0223 hypothetical protein K03744 lemA; LemA protein
D UT28_C0001G0729 hypothetical protein K08972 K08972; putative membrane protein
C 99997 Function unknown
D UT28_C0001G0186 hypothetical protein K06884 K06884; uncharacterized protein
D UT28_C0001G0187 hypothetical protein K06884 K06884; uncharacterized protein
D UT28_C0001G0941 hypothetical protein K06884 K06884; uncharacterized protein
D UT28_C0001G0609 hypothetical protein K06884 K06884; uncharacterized protein
D UT28_C0001G0614 hypothetical protein K06933 K06933; uncharacterized protein
D UT28_C0001G0775 hypothetical protein K06960 K06960; uncharacterized protein
D UT28_C0001G0851 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D UT28_C0001G0166 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07006 K07006; uncharacterized protein
D UT28_C0001G0837 permease K07089 K07089; uncharacterized protein
D UT28_C0001G0443 hypothetical protein K08998 K08998; uncharacterized protein
D UT28_C0001G0150 hypothetical protein K09005 K09005; uncharacterized protein
D UT28_C0001G0005 hypothetical protein K09117 K09117; uncharacterized protein
D UT28_C0001G0955 hypothetical protein K09131 K09131; uncharacterized protein
D UT28_C0001G0811 hypothetical protein K09141 K09141; uncharacterized protein
D UT28_C0001G0794 hypothetical protein K09779 K09779; uncharacterized protein
D UT28_C0001G0805 hypothetical protein K09793 K09793; uncharacterized protein
D UT28_C0001G0807 hypothetical protein K09799 K09799; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024