+E Ribosome biogenesis KO
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Ribosome Biogenesis - Borreliella burgdorferi N40
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D BbuN40_0705 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C BbuN40_0660 era; GTP-binding protein Era K03595 era; GTPase
C BbuN40_0781 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C BbuN40_0168 DnaK suppressor, putative K06204 dksA; RNA polymerase-binding transcription factor
C BbuN40_0800 transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
C BbuN40_0107 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C BbuN40_0394 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D BbuN40_0590 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BbuN40_0206 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BbuN40_0358 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BbuN40_0062 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BbuN40_0177 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BbuN40_0306 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BbuN40_0427 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BbuN40_0506 rrmJ; ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D BbuN40_0516 RNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BbuN40_0313 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BbuN40_0506 rrmJ; ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BbuN40_0129 hypothetical RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BbuN40_0815 RNA pseudouridine synthase family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BbuN40_0018 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C BbuN40_0697 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
B rRNA processing factors
C BbuN40_0705 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C BbuN40_0660 era; GTP-binding protein Era K03595 era; GTPase
C BbuN40_0099 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C BbuN40_0508 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
C BbuN40_0781 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C BbuN40_0643 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
B Other maturation factors
C BbuN40_0734 Sua5/YciO/YrdC/YwlC family protein, putative K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C BbuN40_0198 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C BbuN40_0802 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C BbuN40_0799 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C BbuN40_0784 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein
C BbuN40_0060 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
C BbuN40_0235 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024