+D GENES KO #

  KEGG Orthology (KO) - Borreliella burgdorferi B31

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bbu00010] D BB_0730 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BB_0727 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BB_0445 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BB_0055 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BB_0057 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BB_0056 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BB_0658 phosphoglycerate mutase family protein, putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BB_0337 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BB_0348 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BB_0087 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BB_0559 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BB_0645 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_0116 pts system, maltose and glucose-specific iiabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_B29 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] C 00020 Citrate cycle (TCA cycle) C 00030 Pentose phosphate pathway [PATH:bbu00030] D BB_0730 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BB_0636 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BB_0222 6-phosphogluconolactonase (6PGL) K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D BB_0561 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BB_0657 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BB_0544 phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BB_0445 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BB_0727 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions C 00051 Fructose and mannose metabolism [PATH:bbu00051] D BB_0407 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BB_0835 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D BB_0727 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BB_0630 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D BB_0445 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BB_0055 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BB_0408 pts system, fructose-specific iiabc component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D BB_0629 pts system, fructose-specific iiabc component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism D BB_0727 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism D BB_0444 WbnF K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:bbu00500] D BB_B05 chbA; chitibiose transporter protein chbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D BB_B06 chbB; chitibiose transporter protein chbB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D BB_B04 chbC; chitibiose transporter protein chbC K02761 celB; cellobiose PTS system EIIC component D BB_0166 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D BB_0559 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BB_0645 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_0116 pts system, maltose and glucose-specific iiabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_B29 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_0730 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bbu00520] D BB_0620 beta-glucosidase, putative K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D BB_0559 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BB_0151 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D BB_0152 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D BB_0472 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BB_0598 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BB_0644 putative N-acetylmannosamine-6-P epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D BB_0645 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_0116 pts system, maltose and glucose-specific iiabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_B29 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_0444 WbnF K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D BB_0730 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BB_0407 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BB_0835 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00620 Pyruvate metabolism [PATH:bbu00620] D BB_0622 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BB_0348 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BB_B01 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D BB_0087 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bbu00630] D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BB_0676 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D BB_0601 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00640 Propanoate metabolism [PATH:bbu00640] D BB_0622 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BB_0087 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BB_0364 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:bbu00650] D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BB_0683 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism [PATH:bbu00562] D BB_0524 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BB_0055 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bbu00190] D BB_0093 V-type ATP synthase beta chain (V-type ATPase subunitB) K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D BB_0092 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D BB_0096 V-type ATP synthase subunit E (V-type ATPase subunit E) K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D BB_0090 V-type ATPase, subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:bbu00680] D BB_0601 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BB_0337 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BB_0445 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BB_0727 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BB_0622 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BB_0658 phosphoglycerate mutase family protein, putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism D BB_0619 DHH family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bbu00061] D BB_0704 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D BB_0593 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BB_0137 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:bbu00071] D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BB_0593 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BB_0137 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bbu00561] D BB_0241 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D BB_0327 glycerol-3-phosphate O-acyltransferase, putative K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D BB_0037 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-agpacyltransferase) (1-agpat) (lysophosphatidic acid acyltransferase)(lpaat) K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:bbu00564] D BB_0368 glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D BB_0243 glycerol-3-phosphate dehydrogenase, anaerobic K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D BB_0327 glycerol-3-phosphate O-acyltransferase, putative K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D BB_0037 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-agpacyltransferase) (1-agpat) (lysophosphatidic acid acyltransferase)(lpaat) K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BB_0249 phosphatidyltransferase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D BB_0721 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bbu00230] D BB_0544 phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BB_0777 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BB_0467 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BB_B17 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BB_0463 nucleoside diphosphate kinase (NDK) (NDP kinase)(Nucleoside-2-P kinase) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BB_0247 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D BB_B18 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BB_0198 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BB_K17 adeC; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D BB_0505 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D BB_0417 adenylate kinase (ATP-AMP transphosphorylase) (AK)(Superoxide-inducible protein 16) (SOI16) K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:bbu00240] D BB_0571 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D BB_0463 nucleoside diphosphate kinase (NDK) (NDP kinase)(Nucleoside-2-P kinase) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BB_0575 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D BB_0128 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D BB_0819 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D BB_0015 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D BB_0505 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D BB_0618 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D BB_0793 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D BB_0791 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism C 00260 Glycine, serine and threonine metabolism [PATH:bbu00260] D BB_0601 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BB_0658 phosphoglycerate mutase family protein, putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00270 Cysteine and methionine metabolism [PATH:bbu00270] D BB_0376 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BB_I06 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D BB_0375 pfs; putative nucleosidase, Pfs protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D BB_0588 bgp; MTA/SAH nucleosidase, Borrelia Glycosaminoglycan binding Protein (Bgp) K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D BB_0467 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BB_0377 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BB_0087 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00280 Valine, leucine and isoleucine degradation [PATH:bbu00280] D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BB_0683 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis [PATH:bbu00300] D BB_0201 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BB_0304 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme) K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:bbu00220] D BB_0842 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D BB_0841 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] C 00330 Arginine and proline metabolism C 00340 Histidine metabolism C 00350 Tyrosine metabolism C 00360 Phenylalanine metabolism C 00380 Tryptophan metabolism D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism D BB_0622 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D BB_0533 PhnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism D BB_0587 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D BB_0601 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:bbu00470] D BB_0160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BB_0200 D-alanine--D-alanine ligase (D-alanylalanine synthetase)(D-Ala-D-Ala ligase) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BB_0100 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BB_0585 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] C 00480 Glutathione metabolism [PATH:bbu00480] D BB_0608 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D BB_0561 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BB_0636 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bbu00541] D BB_0444 WbnF K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D BB_0407 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BB_0835 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00550 Peptidoglycan biosynthesis [PATH:bbu00550] D BB_0472 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BB_0598 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BB_0817 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BB_0585 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BB_0201 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BB_0200 D-alanine--D-alanine ligase (D-alanylalanine synthetase)(D-Ala-D-Ala ligase) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BB_0304 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme) K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BB_0120 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BB_0258 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BB_0303 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BB_0767 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BB_0732 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D BB_0718 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D BB_0136 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BB_0605 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BB_0582 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:bbu00552] D BB_0258 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bbu00730] D BB_0084 aminotransferase, class V superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BB_0099 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D BB_0417 adenylate kinase (ATP-AMP transphosphorylase) (AK)(Superoxide-inducible protein 16) (SOI16) K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism C 00750 Vitamin B6 metabolism [PATH:bbu00750] D BB_0768 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] C 00760 Nicotinate and nicotinamide metabolism [PATH:bbu00760] D BB_0635 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D BB_0782 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D BB_E22 pncA; pyrazinamidase/nicotinamidase, PncA protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D BB_0311 putative inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:bbu00770] D BB_0527 transcriptional activator, putative, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D BB_0812 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D BB_0702 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D BB_0547 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D BB_0010 holo-[acyl-carrier-protein] synthase (Holo-ACP synthase)(4'-phosphopantetheinyl transferase AcpS) K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis C 00670 One carbon pool by folate [PATH:bbu00670] D BB_0026 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BB_0601 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BB_0064 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] C 00830 Retinol metabolism C 00860 Porphyrin metabolism D BB_0372 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bbu00900] D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BB_0683 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D BB_0685 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D BB_0688 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D BB_0687 phosphomevalonate kinase, putative K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D BB_0686 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D BB_0684 fni; isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D BB_0314 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D BB_0120 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis D BB_0524 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D BB_0704 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D BB_0376 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D BB_B01 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bbu03020] D BB_0388 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BB_0502 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bbu03010] D BB_0127 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BB_0123 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BB_0484 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BB_0615 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BB_0495 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BB_0115 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BB_0386 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BB_0492 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BB_0338 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BB_0477 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BB_0501 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BB_0387 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BB_0500 rpsM; ribosomal protein S13p/S18e K02952 RP-S13; small subunit ribosomal protein S13 D BB_0491 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14 D BB_0804 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BB_0695 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BB_0487 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BB_0113 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BB_0482 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BB_0233 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BB_0256 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D BB_0392 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BB_0481 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BB_0478 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BB_0479 rplD; ribosomal protein L4/L1 family K02926 RP-L4; large subunit ribosomal protein L4 D BB_0490 ribosomal L5P family C-terminus protein K02931 RP-L5; large subunit ribosomal protein L5 D BB_0493 ribosomal protein L6, putative K02933 RP-L6; large subunit ribosomal protein L6 D BB_0390 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BB_0112 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BB_0391 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BB_0393 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BB_0339 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BB_0488 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BB_0497 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BB_0485 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BB_0503 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BB_0494 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BB_0699 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BB_0778 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BB_0483 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BB_0480 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BB_0489 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BB_0786 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D BB_0780 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BB_0350 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BB_0486 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BB_0496 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BB_0229 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BB_0703 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BB_0396 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BB_0440 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BB_0189 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BB_0499 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:bbu00970] D BB_0372 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BB_0342 glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BB_0341 glu-trnagln amidotransferase suBunit b K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BB_0343 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BB_0220 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BB_0446 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BB_0101 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BB_0371 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BB_0226 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BB_0599 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BB_0587 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BB_0064 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BB_0738 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BB_0251 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BB_0833 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BB_0659 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D BB_0594 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BB_0402 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BB_0135 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BB_0514 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BB_0370 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BB_0005 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bbu03060] D BB_0498 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D BB_0395 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D BB_0054 putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D BB_0652 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D BB_0653 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D BB_0651 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D BB_0154 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BB_0694 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BB_0076 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D BB_0031 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BB_0263 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BB_0030 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BB_0469 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:bbu04122] D BB_0084 aminotransferase, class V superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BB_0682 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:bbu03018] D BB_0337 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BB_0805 polyribonucleotide nucleotidyltransferase (Polynucleotidephosphorylase) (PNPase) (Vegetative protein 15) (VEG15) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BB_0230 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D BB_0504 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D BB_0727 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BB_0518 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BB_0649 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:bbu03030] D BB_0579 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BB_0461 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0765 conserved hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0455 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BB_0438 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BB_G32 putative replicative helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BB_0111 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BB_0114 single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein D BB_0046 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BB_0548 polA; DNA polymerase I superfamily K02335 polA; DNA polymerase I [EC:2.7.7.7] D BB_0552 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bbu03410] D BB_0745 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BB_0053 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BB_0422 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D BB_0534 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BB_0548 polA; DNA polymerase I superfamily K02335 polA; DNA polymerase I [EC:2.7.7.7] D BB_0254 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D BB_0552 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bbu03420] D BB_0623 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BB_0837 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D BB_0457 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D BB_0344 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BB_0548 polA; DNA polymerase I superfamily K02335 polA; DNA polymerase I [EC:2.7.7.7] D BB_0552 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:bbu03430] D BB_0797 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D BB_0098 MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D BB_0211 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D BB_0344 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BB_0254 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D BB_0114 single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein D BB_0579 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BB_0438 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BB_0461 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0765 conserved hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0455 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BB_0552 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:bbu03440] D BB_0254 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D BB_0114 single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein D BB_0131 recA; protein RecA K03553 recA; recombination protein RecA D BB_0548 polA; DNA polymerase I superfamily K02335 polA; DNA polymerase I [EC:2.7.7.7] D BB_0023 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D BB_0022 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BB_0581 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BB_0633 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D BB_0632 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D BB_0579 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BB_0438 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BB_0461 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0765 conserved hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0455 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BB_0014 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bbu02010] D BB_0639 spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D BB_0640 binding-protein-dependent transport systems inner membrane component domain protein K11070 potC; spermidine/putrescine transport system permease protein D BB_0641 putrescine transport system permease protein PotH K11071 potB; spermidine/putrescine transport system permease protein D BB_0642 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D BB_0144 glycine betaine, L-proline ABC transporter, glycine/betaine/L-proline-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D BB_0145 glycine betaine, L-proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein D BB_0146 glycine betaine, L-proline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D BB_0383 bmpA; basic membrane protein A (bmpA), immunodominant antigen P39 K07335 bmpA; basic membrane protein A and related proteins D BB_0382 bmpB; basic membrane protein B (bmpB) K07335 bmpA; basic membrane protein A and related proteins D BB_0384 bmpC; basic membrane protein C (bmpC) K07335 bmpA; basic membrane protein A and related proteins D BB_0385 bmpD; basic membrane protein D (bmpD) K07335 bmpA; basic membrane protein A and related proteins D BB_0678 ribose/galactose ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein D BB_0679 ribose/galactose ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein D BB_0677 rbsA; sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D BB_0215 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D BB_0216 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D BB_0217 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D BB_0218 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BB_0328 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_0330 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_B16 oppAIV; oligopeptide ABC transporter OppAIV K15580 oppA; oligopeptide transport system substrate-binding protein D BB_A34 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_0332 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein D BB_0333 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D BB_0334 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D BB_0335 OppF K10823 oppF; oligopeptide transport system ATP-binding protein D BB_0081 efflux ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D BB_0080 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D BB_0807 conserved hypothetical integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein D BB_0808 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein D BB_0466 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:bbu02060] D BB_0558 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BB_0448 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BB_0557 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BB_0559 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BB_0645 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_0116 pts system, maltose and glucose-specific iiabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_B29 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_B05 chbA; chitibiose transporter protein chbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D BB_B06 chbB; chitibiose transporter protein chbB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D BB_B04 chbC; chitibiose transporter protein chbC K02761 celB; cellobiose PTS system EIIC component D BB_0408 pts system, fructose-specific iiabc component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D BB_0629 pts system, fructose-specific iiabc component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D BB_0630 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:bbu03070] D BB_0652 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D BB_0653 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D BB_0395 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D BB_0054 putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D BB_0498 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D BB_0651 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D BB_0154 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BB_0076 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D BB_0694 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:bbu02020] D BB_0215 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D BB_0147 p41 K02406 fliC; flagellin D BB_0281 chemotaxis protein MotA (Motility protein A) K02556 motA; chemotaxis protein MotA D BB_0437 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BB_0582 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D BB_0184 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BB_0450 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D BB_0414 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D BB_0040 cheR; CheR methyltransferase, SAM binding domain K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D BB_0680 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0578 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0596 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0597 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0681 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0565 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0312 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0670 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0567 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0669 CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0570 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0672 CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0551 CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0415 putative protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D BB_0568 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D BB_0420 sensory transduction histidine kinase, putative K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3] D BB_0419 response regulatory protein K18444 rrp1; two-component system, glycerol uptake and utilization response regulator C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bbu02024] D BB_0377 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BB_0593 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BB_0137 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BB_0328 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_0330 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_B16 oppAIV; oligopeptide ABC transporter OppAIV K15580 oppA; oligopeptide transport system substrate-binding protein D BB_A34 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_0332 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein D BB_0333 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D BB_0334 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D BB_0335 OppF K10823 oppF; oligopeptide transport system ATP-binding protein D BB_0747 oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D BB_0395 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D BB_0054 putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D BB_0498 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D BB_0651 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D BB_0154 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BB_0076 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D BB_0694 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:bbu02030] D BB_0680 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0578 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0596 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0597 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0681 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0567 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0669 CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0565 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0312 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0670 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0570 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0672 CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0551 CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0671 CheC-like family protein K03409 cheX; chemotaxis protein CheX D BB_0415 putative protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D BB_0568 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D BB_0606 CheD family K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D BB_0414 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D BB_0040 cheR; CheR methyltransferase, SAM binding domain K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D BB_0290 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D BB_0221 flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D BB_0278 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D BB_0277 flagellar switch protein FliY K02417 fliN; flagellar motor switch protein FliN D BB_0281 chemotaxis protein MotA (Motility protein A) K02556 motA; chemotaxis protein MotA D BB_0280 flagellar motor apparatus K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:bbu02040] D BB_0292 fliE; flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D BB_0291 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D BB_0290 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D BB_0221 flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D BB_0289 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D BB_0288 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D BB_0279 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D BB_0278 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D BB_0277 flagellar switch protein FliY K02417 fliN; flagellar motor switch protein FliN D BB_0276 flagellar protein FliZ K02418 fliO; flagellar protein FliO/FliZ D BB_0275 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D BB_0274 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D BB_0273 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D BB_0271 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D BB_0272 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D BB_0294 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D BB_0293 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D BB_0284 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D BB_0283 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D BB_0775 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D BB_0774 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D BB_0772 flagellar P-ring protein (Basal body P-ring protein) K02394 flgI; flagellar P-ring protein FlgI D BB_0771a hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D BB_0147 p41 K02406 fliC; flagellin D BB_0550 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D BB_0281 chemotaxis protein MotA (Motility protein A) K02556 motA; chemotaxis protein MotA D BB_0280 flagellar motor apparatus K02557 motB; chemotaxis protein MotB D BB_0712 RNA polymerase sigma factor RpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor D BB_0450 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D BB_0337 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bbu01501] D BB_0620 beta-glucosidase, putative K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D BB_0328 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_0330 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_B16 oppAIV; oligopeptide ABC transporter OppAIV K15580 oppA; oligopeptide transport system substrate-binding protein D BB_A34 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_0332 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein D BB_0333 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D BB_0334 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D BB_0335 OppF K10823 oppF; oligopeptide transport system ATP-binding protein D BB_0732 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D BB_0718 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D BB_0136 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:bbu01502] D BB_0200 D-alanine--D-alanine ligase (D-alanylalanine synthetase)(D-Ala-D-Ala ligase) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BB_0160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BB_0304 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme) K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BB_0303 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BB_0767 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BB_0582 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bbu01503] D BB_0625 N-acetylmuramoyl-L-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BB_0666 N-acetylmuramoyl-L-alanine amidase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bbu01000] C 01001 Protein kinases [BR:bbu01001] D BB_0764 sensory transduction histidine kinase, putative K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D BB_0567 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0669 CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0420 sensory transduction histidine kinase, putative K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:bbu01009] D BB_0727 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BB_0560 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:bbu01002] D BB_0469 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D BB_B18 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BB_0621 4-methyl-5 K03152 thiJ; protein deglycase [EC:3.5.1.124] D BB_0248 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D BB_0582 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D BB_0228 peptidase M16 inactive domain family K06972 PITRM1; presequence protease [EC:3.4.24.-] D BB_0536 zinc protease, putative K07263 pqqL; zinc protease [EC:3.4.24.-] D BB_0608 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D BB_0105 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D BB_0069 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D BB_0789 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BB_0118 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D BB_0605 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BB_0611 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BB_0757 clpP; Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BB_0253 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D BB_0613 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D BB_0031 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BB_0263 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BB_0030 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BB_0296 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D BB_0204 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC D BB_0203 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:bbu01003] D BB_0732 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bbu01011] D BB_0472 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BB_0598 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BB_0817 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BB_0585 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BB_0201 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BB_0200 D-alanine--D-alanine ligase (D-alanylalanine synthetase)(D-Ala-D-Ala ligase) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BB_0160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BB_0100 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BB_0303 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BB_0767 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BB_0258 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BB_0810 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D BB_0732 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D BB_0718 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D BB_0136 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BB_0605 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BB_0582 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D BB_0259 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D BB_0709 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D BB_0735 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D BB_0625 N-acetylmuramoyl-L-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BB_0666 N-acetylmuramoyl-L-alanine amidase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:bbu01004] D BB_0593 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BB_0137 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BB_0327 glycerol-3-phosphate O-acyltransferase, putative K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D BB_0037 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-agpacyltransferase) (1-agpat) (lysophosphatidic acid acyltransferase)(lpaat) K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:bbu01006] D BB_0314 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D BB_0120 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BB_0821 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:bbu01007] D BB_0659 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D BB_0372 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BB_0370 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BB_0005 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BB_0599 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BB_0594 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BB_0587 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BB_0833 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BB_0738 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BB_0251 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BB_0446 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BB_0101 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BB_0135 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BB_0371 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BB_0226 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BB_0402 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BB_0220 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BB_0514 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bbu03000] D BB_0434 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BB_0731 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BB_0355 transcription factor, putative K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription C 03021 Transcription machinery [BR:bbu03021] D BB_0502 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BB_0388 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BB_0712 RNA polymerase sigma factor RpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor D BB_0771 rpoS; RNA polymerase sigma factor (rpoS) K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D BB_0450 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D BB_0800 transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA D BB_0107 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D BB_0394 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D BB_0230 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bbu03019] D BB_0705 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BB_0504 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D BB_0337 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BB_0805 polyribonucleotide nucleotidyltransferase (Polynucleotidephosphorylase) (PNPase) (Vegetative protein 15) (VEG15) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BB_0230 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D BB_0727 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BB_0518 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BB_0649 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BB_0184 csrA; carbon storage regulator K03563 csrA; carbon storage regulator C 03041 Spliceosome C 03011 Ribosome [BR:bbu03011] D BB_0127 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BB_0123 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BB_0484 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BB_0615 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BB_0495 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BB_0115 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BB_0386 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BB_0492 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BB_0338 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BB_0477 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BB_0501 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BB_0387 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BB_0500 rpsM; ribosomal protein S13p/S18e K02952 RP-S13; small subunit ribosomal protein S13 D BB_0491 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14 D BB_0804 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BB_0695 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BB_0487 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BB_0113 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BB_0482 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BB_0233 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BB_0256 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D BB_0392 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BB_0481 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BB_0478 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BB_0479 rplD; ribosomal protein L4/L1 family K02926 RP-L4; large subunit ribosomal protein L4 D BB_0490 ribosomal L5P family C-terminus protein K02931 RP-L5; large subunit ribosomal protein L5 D BB_0493 ribosomal protein L6, putative K02933 RP-L6; large subunit ribosomal protein L6 D BB_0112 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BB_0391 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BB_0393 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BB_0390 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BB_0339 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BB_0488 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BB_0497 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BB_0485 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BB_0503 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BB_0494 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BB_0699 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BB_0778 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BB_0483 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BB_0480 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BB_0489 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BB_0780 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BB_0350 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BB_0486 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BB_0496 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BB_0229 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BB_0703 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BB_0396 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BB_0440 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BB_0189 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BB_0499 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BB_0786 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:bbu03009] D BB_0705 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BB_0660 era; GTP-binding protein Era K03595 era; GTPase D BB_0781 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D BB_0800 transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA D BB_0107 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D BB_0394 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D BB_0590 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BB_0358 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BB_0062 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BB_0177 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BB_0306 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BB_0427 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BB_0313 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D BB_0129 putative RNA pseudouridine synthase (RNA-uridine isomerase) (RNA pseudouridylate synthase) K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BB_0697 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D BB_0099 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D BB_0508 engA; ribosome-associated GTPase EngA K03977 engA; GTPase D BB_0643 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D BB_T06 Sua5/YciO/YrdC/YwlC family protein, putative K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BB_0734 Sua5/YciO/YrdC/YwlC family protein, putative K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BB_U11 Sua5/YciO/YrdC/YwlC family protein, putative K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BB_0198 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BB_0802 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D BB_0799 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP D BB_0784 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein D BB_0060 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D BB_0235 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:bbu03016] D BB_0755 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D BB_0706 polynucleotide adenylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D BB_0372 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BB_0402 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BB_0833 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BB_0251 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BB_0587 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BB_0594 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BB_0446 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BB_0220 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BB_0101 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BB_0371 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BB_0226 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BB_0599 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BB_0738 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BB_0135 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BB_0514 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BB_0370 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BB_0005 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BB_0379 protein kinase C1 inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BB_0012 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D BB_0803 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D BB_0084 aminotransferase, class V superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BB_T06 Sua5/YciO/YrdC/YwlC family protein, putative K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BB_0734 Sua5/YciO/YrdC/YwlC family protein, putative K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BB_U11 Sua5/YciO/YrdC/YwlC family protein, putative K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BB_0821 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BB_0179 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D BB_0178 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D BB_0441 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D BB_0659 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D BB_0225 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D BB_0698 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D BB_0052 tRNA/rRNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D BB_0682 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BB_0809 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D BB_0788 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D BB_0185 glycoprotease family K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D BB_0769 glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D BB_0186 ATPase, YjeE family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D BB_0805 polyribonucleotide nucleotidyltransferase (Polynucleotidephosphorylase) (PNPase) (Vegetative protein 15) (VEG15) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bbu03012] D BB_0801 translation initiation factor IF-2, putative K02519 infB; translation initiation factor IF-2 D BB_0190 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BB_0122 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D BB_0476 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D BB_0540 fusA; translation elongation factor G K02355 fusA; elongation factor G D BB_0691 fusA; translation elongation factor G K02355 fusA; elongation factor G D BB_0121 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D BB_0197 protoporphyrinogen oxidase, putative K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D BB_0787 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D BB_0169 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D BB_0214 efp; translation elongation factor P K02356 efp; elongation factor P D BB_0074 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:bbu03110] D BB_0834 ATP-dependent Clp protease, subunit C K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D BB_0612 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D BB_0295 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D BB_0560 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D BB_0518 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BB_0649 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BB_0517 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BB_0655 heat shock protein K05516 cbpA; curved DNA-binding protein D BB_0519 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D BB_0741 groS; chaperonin GroS K04078 groES; chaperonin GroES D BB_0789 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] C 04131 Membrane trafficking [BR:bbu04131] D BB_0463 nucleoside diphosphate kinase (NDK) (NDP kinase)(Nucleoside-2-P kinase) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BB_0057 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BB_0658 phosphoglycerate mutase family protein, putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BB_0348 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BB_0560 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:bbu04121] C 03051 Proteasome [BR:bbu03051] D BB_0560 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:bbu03032] D BB_0232 hbb; small DNA-binding protein Hbb K05788 ihfB; integration host factor subunit beta D BB_0437 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BB_G32 putative replicative helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BB_0111 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BB_0114 single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein D BB_0579 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BB_0438 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BB_0455 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BB_0461 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0765 conserved hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0046 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BB_0548 polA; DNA polymerase I superfamily K02335 polA; DNA polymerase I [EC:2.7.7.7] D BB_0552 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BB_0435 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BB_0436 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BB_0035 DNA gyrase/topoisomerase IV, A subunit domain protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D BB_0036 DNA topoisomerase II (N-region) domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D BB_0828 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bbu03036] D BB_0705 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BB_0232 hbb; small DNA-binding protein Hbb K05788 ihfB; integration host factor subunit beta D BB_0655 heat shock protein K05516 cbpA; curved DNA-binding protein D BB_0437 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BB_0690 napA; neutrophil activating protein A (napA) K04047 dps; starvation-inducible DNA-binding protein D BB_0045 P115 protein K03529 smc; chromosome segregation protein D BB_0300 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D BB_0136 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BB_0301 DivIB K03589 ftsQ; cell division protein FtsQ D BB_0302 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D BB_0299 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BB_0625 N-acetylmuramoyl-L-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BB_0666 N-acetylmuramoyl-L-alanine amidase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BB_0715 cell division protein FtsA, putative K03569 mreB; rod shape-determining protein MreB and related proteins D BB_0716 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D BB_0719 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D BB_0431 CobQ/CobB/MinD/ParA nucleotide binding domain, putative K03496 parA; chromosome partitioning protein D BB_0434 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BB_0731 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BB_0035 DNA gyrase/topoisomerase IV, A subunit domain protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D BB_0036 DNA topoisomerase II (N-region) domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D BB_0178 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D BB_0177 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] C 03400 DNA repair and recombination proteins [BR:bbu03400] D BB_0053 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BB_0422 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D BB_0745 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BB_0534 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BB_0254 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D BB_0552 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BB_0548 polA; DNA polymerase I superfamily K02335 polA; DNA polymerase I [EC:2.7.7.7] D BB_0837 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D BB_0457 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D BB_0344 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BB_0388 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BB_0502 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BB_0623 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BB_0797 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D BB_0098 MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D BB_0211 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D BB_0579 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BB_0438 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BB_0455 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BB_0461 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0765 conserved hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BB_0114 single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein D BB_0633 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D BB_0632 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D BB_0131 recA; protein RecA K03553 recA; recombination protein RecA D BB_0023 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D BB_0022 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BB_0014 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D BB_0830 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D BB_0829 putative Exonuclease SbcD homolog K03547 sbcD; DNA repair protein SbcD/Mre11 D BB_0581 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BB_0435 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BB_0436 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BB_0828 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D BB_0232 hbb; small DNA-binding protein Hbb K05788 ihfB; integration host factor subunit beta D BB_0607 pcrA; ATP-dependent DNA helicase PcrA K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D BB_0619 DHH family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:bbu03029] D BB_0801 translation initiation factor IF-2, putative K02519 infB; translation initiation factor IF-2 D BB_0190 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BB_0122 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D BB_0476 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D BB_0540 fusA; translation elongation factor G K02355 fusA; elongation factor G D BB_0691 fusA; translation elongation factor G K02355 fusA; elongation factor G D BB_0660 era; GTP-binding protein Era K03595 era; GTPase D BB_0370 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BB_0251 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BB_0446 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BB_0371 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BB_0594 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BB_0342 glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BB_0341 glu-trnagln amidotransferase suBunit b K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BB_0343 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BB_0114 single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein D BB_0795 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D BB_0518 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BB_0519 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D BB_0649 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BB_0741 groS; chaperonin GroS K04078 groES; chaperonin GroES D BB_0517 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BB_0084 aminotransferase, class V superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BB_0560 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bbu02000] D BB_0639 spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D BB_0640 binding-protein-dependent transport systems inner membrane component domain protein K11070 potC; spermidine/putrescine transport system permease protein D BB_0641 putrescine transport system permease protein PotH K11071 potB; spermidine/putrescine transport system permease protein D BB_0642 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D BB_0144 glycine betaine, L-proline ABC transporter, glycine/betaine/L-proline-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D BB_0145 glycine betaine, L-proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein D BB_0146 glycine betaine, L-proline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D BB_0383 bmpA; basic membrane protein A (bmpA), immunodominant antigen P39 K07335 bmpA; basic membrane protein A and related proteins D BB_0382 bmpB; basic membrane protein B (bmpB) K07335 bmpA; basic membrane protein A and related proteins D BB_0384 bmpC; basic membrane protein C (bmpC) K07335 bmpA; basic membrane protein A and related proteins D BB_0385 bmpD; basic membrane protein D (bmpD) K07335 bmpA; basic membrane protein A and related proteins D BB_0678 ribose/galactose ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein D BB_0679 ribose/galactose ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein D BB_0677 rbsA; sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D BB_0319 exported protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D BB_0317 conserved hypothetical integral membrane protein K02057 ABC.SS.P; simple sugar transport system permease protein D BB_0318 putative ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D BB_0215 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D BB_0216 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D BB_0217 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D BB_0218 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BB_0328 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_0330 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_B16 oppAIV; oligopeptide ABC transporter OppAIV K15580 oppA; oligopeptide transport system substrate-binding protein D BB_A34 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D BB_0332 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein D BB_0333 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D BB_0334 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D BB_0335 OppF K10823 oppF; oligopeptide transport system ATP-binding protein D BB_0747 oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D BB_0807 conserved hypothetical integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein D BB_0808 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein D BB_0466 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D BB_0754 ABC transporter, ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D BB_0081 efflux ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D BB_0080 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D BB_0574 conserved hypothetical integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BB_J27 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D BB_J26 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BB_0583 conserved hypothetical integral membrane protein K26937 dinF; MATE family, multidrug efflux pump D BB_0473 conserved hypothetical integral membrane protein K26937 dinF; MATE family, multidrug efflux pump D BB_0584 conserved hypothetical integral membrane protein K26937 dinF; MATE family, multidrug efflux pump D BB_0558 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BB_0448 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BB_0557 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BB_0559 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BB_0645 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_0116 pts system, maltose and glucose-specific iiabc component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_B29 pts system, iibc components K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BB_0408 pts system, fructose-specific iiabc component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D BB_0629 pts system, fructose-specific iiabc component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D BB_B05 chbA; chitibiose transporter protein chbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D BB_B06 chbB; chitibiose transporter protein chbB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D BB_B04 chbC; chitibiose transporter protein chbC K02761 celB; cellobiose PTS system EIIC component D BB_0240 glycerol uptake facilitator K02440 glpF; glycerol uptake facilitator D BB_0172 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog D BB_0453 transporter, small conductance mechanosensitive ion channel (MscS) family K03442 mscS; small conductance mechanosensitive channel D BB_0380 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D BB_0281 chemotaxis protein MotA (Motility protein A) K02556 motA; chemotaxis protein MotA D BB_0280 flagellar motor apparatus K02557 motB; chemotaxis protein MotB D BB_0202 hemolysin, putative K03699 tlyC; magnesium and cobalt exporter, CNNM family D BB_0795 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D BB_0465 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D BB_0059 CBS domain pair protein K06189 corC; hemolysin (HlyC) family protein D BB_0219 metal cation transporter, zinc (Zn2+)-iron (Fe2+) permease (ZIP) family K07238 TC.ZIP; zinc transporter, ZIP family D BB_0604 L-lactate permease K03303 lutP; lactate permease D BB_0164 putative K+-dependent Na+/Ca+ exchanger homolog K07301 yrbG; cation:H+ antiporter D BB_0814 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter D BB_0447 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D BB_0725 lectin K03499 trkA; trk/ktr system potassium uptake protein D BB_B23 putative guanine/xanthine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D BB_B22 putative guanine/xanthine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D BB_0451 chromate transport protein, putative K07240 chrA; chromate transporter D BB_0452 chromate transporter superfamily K07240 chrA; chromate transporter D BB_0810 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D BB_0050 transporter K09125 yhhQ; queuosine precursor transporter D BB_0051 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter D BB_0302 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW C 02044 Secretion system [BR:bbu02044] D BB_0580 conserved hypothetical integral membrane protein K02221 yggT; YggT family protein D BB_0591 competence locus E, putative K02238 comEC; competence protein ComEC D BB_0271 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D BB_0272 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D BB_0291 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D BB_0289 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D BB_0288 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D BB_0277 flagellar switch protein FliY K02417 fliN; flagellar motor switch protein FliN D BB_0276 flagellar protein FliZ K02418 fliO; flagellar protein FliO/FliZ D BB_0275 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D BB_0274 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D BB_0273 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D BB_0154 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BB_0652 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D BB_0395 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D BB_0653 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D BB_0054 putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D BB_0498 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D BB_0694 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BB_0076 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D BB_0651 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC C 02042 Bacterial toxins [BR:bbu02042] D BB_0202 hemolysin, putative K03699 tlyC; magnesium and cobalt exporter, CNNM family D BB_0117 membrane protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:bbu02022] D BB_0764 sensory transduction histidine kinase, putative K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D BB_0567 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0669 CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0570 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0672 CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0551 CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0415 putative protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D BB_0568 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D BB_0420 sensory transduction histidine kinase, putative K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3] D BB_0419 response regulatory protein K18444 rrp1; two-component system, glycerol uptake and utilization response regulator C 02035 Bacterial motility proteins [BR:bbu02035] D BB_0567 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0669 CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D BB_0565 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0312 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0670 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D BB_0671 CheC-like family protein K03409 cheX; chemotaxis protein CheX D BB_0606 CheD family K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D BB_0414 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D BB_0040 cheR; CheR methyltransferase, SAM binding domain K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D BB_0415 putative protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D BB_0568 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D BB_0570 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0672 CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0551 CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D BB_0680 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0578 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0596 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0597 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0681 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D BB_0289 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D BB_0288 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D BB_0276 flagellar protein FliZ K02418 fliO; flagellar protein FliO/FliZ D BB_0275 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D BB_0274 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D BB_0273 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D BB_0271 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D BB_0272 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D BB_0290 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D BB_0221 flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D BB_0278 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D BB_0277 flagellar switch protein FliY K02417 fliN; flagellar motor switch protein FliN D BB_0291 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D BB_0772 flagellar P-ring protein (Basal body P-ring protein) K02394 flgI; flagellar P-ring protein FlgI D BB_0279 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D BB_0292 fliE; flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D BB_0294 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D BB_0293 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D BB_0284 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D BB_0775 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D BB_0774 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D BB_0771a hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D BB_0283 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D BB_0147 p41 K02406 fliC; flagellin D BB_0550 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D BB_0281 chemotaxis protein MotA (Motility protein A) K02556 motA; chemotaxis protein MotA D BB_0280 flagellar motor apparatus K02557 motB; chemotaxis protein MotB D BB_0183 conserved hypothetical protein K13626 fliW; flagellar assembly factor FliW D BB_0287 flagellar protein K02382 flbA; flagellar protein FlbA D BB_0286 flagellar protein K02383 flbB; flagellar protein FlbB D BB_0285 flagellar protein K02384 flbC; flagellar protein FlbC D BB_0282 hypothetical protein K02385 flbD; flagellar protein FlbD D BB_0270 flagellar biosynthesis protein FlhF (Flagella-associated GTP-bindingprotein) K02404 flhF; flagellar biosynthesis protein FlhF D BB_0726 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG D BB_0361 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG D BB_0269 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bbu04812] D BB_0715 cell division protein FtsA, putative K03569 mreB; rod shape-determining protein MreB and related proteins D BB_0299 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BB_0300 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D BB_0431 CobQ/CobB/MinD/ParA nucleotide binding domain, putative K03496 parA; chromosome partitioning protein D BB_0434 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BB_0731 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:bbu04147] D BB_0560 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D BB_0337 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BB_0057 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BB_0056 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BB_0348 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BB_0649 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BB_0518 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BB_0730 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BB_B17 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BB_0476 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D BB_0379 protein kinase C1 inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BB_0087 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BB_0593 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BB_0137 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BB_0109 acetyl-CoA acetyltransferases subfamily K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BB_0417 adenylate kinase (ATP-AMP transphosphorylase) (AK)(Superoxide-inducible protein 16) (SOI16) K00939 adk; adenylate kinase [EC:2.7.4.3] D BB_0777 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BB_0241 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D BB_0636 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BB_0055 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BB_0658 phosphoglycerate mutase family protein, putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:bbu02048] D BB_0299 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BB_0715 cell division protein FtsA, putative K03569 mreB; rod shape-determining protein MreB and related proteins D BB_0035 DNA gyrase/topoisomerase IV, A subunit domain protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D BB_0036 DNA topoisomerase II (N-region) domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D BB_0372 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BB_0084 aminotransferase, class V superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:bbu04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:bbu01504] D BB_0582 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bbu03100] # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D BB_0237 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D BB_0362 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D BB_0831 xylose operon regulatory protein K18673 bglK; beta-glucoside kinase [EC:2.7.1.85] D BB_0194 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D BB_0626 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D BB_0065 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BB_0176 ATPase family associated with various cellular activities (AAA), putative K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D BB_0610 tig; trigger factor K03545 tig; trigger factor D BB_0033 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D BB_0086 putative Mg chelatase homolog K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D BB_0297 protein smf K04096 smf; DNA processing protein D BB_G21 phage terminase, large subunit, pbsx family K06909 xtmB; phage terminase large subunit D BB_H40 transposase, family K07496 K07496; putative transposase D BB_I41 conserved hypothetical protein K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D BB_0852 type I restriction enzyme r protein n terminus (hsdr_n) K07504 K07504; predicted type IV restriction endonuclease D BB_0462 efbC; putative DNA-binding protein, ebfC protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth D BB_0443 spoiiij-associtated protein K06346 jag; spoIIIJ-associated protein D BB_0785 putative septation protein spoVG (Stage V sporulation protein G) K06412 spoVG; stage V sporulation protein G C 99993 Cell motility C 99995 Signaling proteins C 99992 Structural proteins D BB_0006 membrane protein K11744 tqsA; AI-2 transport protein TqsA C 99994 Others D BB_0042 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D BB_0766 cvpA; CvpA family protein K03558 cvpA; membrane protein required for colicin V production D BB_0759 membrane protein, putative K08974 K08974; putative membrane protein C 99997 Function unknown D BB_0539 membrane protein, putative K06890 K06890; uncharacterized protein D BB_0729 transporter, dicarboxylate/amino acid:cation (na+ or H+) symporter (daacs) family K06956 K06956; uncharacterized protein D BB_0696 conserved hypothetical protein K06960 K06960; uncharacterized protein D BB_0103 phosphoribosyl transferase domain protein K07101 K07101; uncharacterized protein D BB_0713 conserved hypothetical protein K07164 K07164; uncharacterized protein D BB_0143 conserved hypothetical protein YidD K08998 K08998; uncharacterized protein D BB_0663 conserved hypothetical protein K09005 K09005; uncharacterized protein D BB_0267 conserved hypothetical protein K09749 K09749; uncharacterized protein D BB_0011 conserved hypothetical protein K09766 K09766; uncharacterized protein D BB_0029 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D BB_0244 conserved hypothetical protein K09770 K09770; uncharacterized protein D BB_0070 conserved hypothetical protein K09775 K09775; uncharacterized protein D BB_K13 conserved hypothetical protein K09797 K09797; uncharacterized protein D BB_0770 divergent polysaccharide deacetylase superfamily K09798 K09798; uncharacterized protein D BB_B07 putative alpha3-beta1 integrin-binding protein K09963 K09963; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024