+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Bacillus licheniformis ATCC 14580

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D BL02317 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C BL03674 bex; GTP-binding protein K03595 era; GTPase C BL01159 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C BL01227 nusA; NusA K02600 nusA; transcription termination/antitermination protein NusA C BL01528 nusB; NusB K03625 nusB; transcription antitermination protein NusB C BL05007 nusG; transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D BL00034 ytzF; putative Pseudouridine synthase YtzF K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D BL00529 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BL02299 rsmB; rRNA SAM-dependent methyltransferase RmsB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D BL02799 ybxB; hypothetical protein with SAM binding motif K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BL02990 ylbH; Adenine-specific DNA methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BL02100 Conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BL00108 gidB; glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BL02234 mraW; putative methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BL00535 yabC; putative methyltransferase YabC containing domain UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BL01522 yqxC; putative hemolysin A YqxC K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D BL03271 yacO; putative tRNA/rRNA methyltransferase YacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BL02382 yydA; conserved hypothetical protein containing DUF163 domain YydA K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BL03857 ywbD; SAM (and some other nucleotide) binding motif,PUA domain K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D BL02300 yloN; Conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BL01522 yqxC; putative hemolysin A YqxC K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BL02629 yefA; putative RNA methyltransferase YefA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D BL03091 yfjO; tRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D BL00662 rluB; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BL02270 ylyB; Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BL01010 yjbO; Pseudouridine synthase YjbO K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BL03158 yhcT; putative Pseudouridine synthase YhcT K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C BL00844 ydiD; Ribosomal-protein-alanine acetyltransferase YdiD K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C BL02628 yjcK; putative ribosomal-protein-alanine N-acetyltransferase YjcK K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C BL00141 ydaF; GCN5-related N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C BL05160 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM C BL02838 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C BL02099 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C BL02317 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C BL02031 yrrK; conserved protein YrrK K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C BL03270 yazC; putative Ribonuclease III, conserved hypothetical YazC protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C BL00221 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C BL02197 ydbR; probable ATP-dependent RNA helicase YdbR K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C BL03698 yqfR; DEAD/DEAH box ATP dependent helicase YqfR K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C BL03674 bex; GTP-binding protein K03595 era; GTPase C BL02304 cpgA; GTP binding protein EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C BL01344 cpgA; GTP-binding protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C BL02792 engA; GTP-binding protein essential for cell growth K03977 engA; GTPase C BL01159 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] C BL01289 rbgA; GTP-binding domain protein K14540 rbgA; ribosome biogenesis GTPase A C BL03236 ynbA; GTP-binding protein K03665 hflX; GTPase C BL02078 yqeH; essential GTPase K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C BL03986 ywlC; conserved protein YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C BL01124 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C BL01221 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C BL01228 ylxS; conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP C BL00078 yaaA; conserved protein YaaA K14761 rlbA; ribosome-associated protein C BL02083 Iojap-related protein K09710 ybeB; ribosome-associated protein C BL03671 Conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor C BL02080 hypothetical protein K07574 yhbY; RNA-binding protein C BL03380 yvyD; YvyD K05808 hpf; ribosome hibernation promoting factor C BL00101 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase C BL02993 ylbN; conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024