+D GENES KO
#
KEGG Orthology (KO) - Paraburkholderia phymatum
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bph00010]
D Bphy_0625 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Bphy_1019 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Bphy_1098 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Bphy_6494 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_5951 Fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_0685 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_3578 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Bphy_0461 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Bphy_2011 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Bphy_2598 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Bphy_0459 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Bphy_0266 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Bphy_2558 Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Bphy_1439 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Bphy_0460 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Bphy_1321 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Bphy_1099 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Bphy_7491 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_1848 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_1470 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_7029 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Bphy_7030 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Bphy_3758 alpha/beta hydrolase fold protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_7031 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_1469 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_0483 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Bphy_5870 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_5774 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_4997 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_3325 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_6824 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_7192 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Bphy_4796 Gluconate 2-dehydrogenase (acceptor) K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D Bphy_6799 Gluconate 2-dehydrogenase (acceptor) K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D Bphy_3250 Gluconate 2-dehydrogenase (acceptor) K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_0010 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Bphy_1938 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_5127 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_4939 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_7028 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1850 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_3178 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Bphy_2344 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Bphy_2610 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Bphy_2267 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Bphy_2399 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D Bphy_0030 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:bph00020]
D Bphy_0550 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Bphy_5205 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Bphy_4366 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Bphy_6878 aconitate hydratase domain protein K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Bphy_4352 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Bphy_5855 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Bphy_5456 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Bphy_0565 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Bphy_1721 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Bphy_6318 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Bphy_1720 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_4692 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Bphy_0444 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Bphy_4693 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Bphy_0443 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Bphy_5077 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Bphy_5588 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Bphy_4363 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Bphy_5589 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Bphy_4364 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Bphy_5586 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Bphy_4361 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Bphy_5587 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Bphy_4362 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Bphy_1941 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Bphy_0795 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Bphy_4358 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Bphy_0030 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Bphy_7491 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_1848 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_1470 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_7029 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Bphy_7030 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Bphy_3758 alpha/beta hydrolase fold protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_7031 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_1469 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bph00030]
D Bphy_1019 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Bphy_0627 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_3342 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_2400 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_0626 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Bphy_6529 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D Bphy_2090 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D Bphy_6877 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D Bphy_4715 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Bphy_2696 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Bphy_5877 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Bphy_5878 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Bphy_2599 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Bphy_2104 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Bphy_1693 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Bphy_5497 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D Bphy_4652 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Bphy_4655 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Bphy_1233 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Bphy_7448 cyclic nucleotide-binding protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D Bphy_4591 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Bphy_2267 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Bphy_3770 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D Bphy_7042 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Bphy_0315 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Bphy_2580 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D Bphy_2579 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Bphy_4761 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D Bphy_5562 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D Bphy_5161 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_4442 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_6029 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_1251 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_0811 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_6845 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_2577 carbohydrate kinase, thermoresistant glucokinase family K00851 idnK; gluconokinase [EC:2.7.1.12]
D Bphy_5548 carbohydrate kinase, thermoresistant glucokinase family K00851 idnK; gluconokinase [EC:2.7.1.12]
D Bphy_0974 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Bphy_1253 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Bphy_3578 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Bphy_0461 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Bphy_6494 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_5951 Fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_0685 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_1098 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:bph00040]
D Bphy_7394 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2]
D Bphy_5760 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D Bphy_5759 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Bphy_6340 Mannitol dehydrogenase domain K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D Bphy_4298 Altronate dehydratase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D Bphy_0750 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Bphy_1058 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Bphy_1077 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_1592 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_2479 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_4997 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_2696 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Bphy_0504 Xylulokinase K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D Bphy_0482 carbohydrate kinase FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D Bphy_1198 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Bphy_0497 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Bphy_6659 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Bphy_2342 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Bphy_0498 Mannitol dehydrogenase domain K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D Bphy_6662 Alcohol dehydrogenase GroES domain protein K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9]
D Bphy_2612 short-chain dehydrogenase/reductase SDR K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D Bphy_3694 Dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D Bphy_6168 Dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D Bphy_4441 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Bphy_6713 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Bphy_6526 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:bph00051]
D Bphy_0148 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Bphy_2475 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_1056 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_2283 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_3725 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_2293 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_2267 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Bphy_1069 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_2471 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_6734 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_2470 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Bphy_6327 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Bphy_6342 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Bphy_4297 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Bphy_4296 amidohydrolase 2 K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D Bphy_5599 Mandelate racemase/muconate lactonizing protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D Bphy_4295 short-chain dehydrogenase/reductase SDR K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D Bphy_3531 fumarylacetoacetate (FAA) hydrolase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D Bphy_6717 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D Bphy_3467 short-chain dehydrogenase/reductase SDR K18337 LRA1; L-rhamnose 1-dehydrogenase [EC:1.1.1.378 1.1.1.377 1.1.1.173]
D Bphy_3468 Mandelate racemase/muconate lactonizing protein K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D Bphy_3470 short-chain dehydrogenase/reductase SDR K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D Bphy_6716 short-chain dehydrogenase/reductase SDR K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D Bphy_6096 short-chain dehydrogenase/reductase SDR K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D Bphy_1098 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Bphy_6494 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_5951 Fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_0685 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_2342 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Bphy_0489 short-chain dehydrogenase/reductase SDR K08261 E1.1.99.21; D-sorbitol dehydrogenase (acceptor) [EC:1.1.99.21]
D Bphy_0498 Mannitol dehydrogenase domain K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D Bphy_3578 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Bphy_0461 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Bphy_2011 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Bphy_6049 Levanase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D Bphy_2320 NAD-dependent epimerase/dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D Bphy_0260 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:bph00052]
D Bphy_2344 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Bphy_2610 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Bphy_2271 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_2297 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_6101 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_1077 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_1592 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_2479 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_2267 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Bphy_0625 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Bphy_6542 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Bphy_2352 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Bphy_1098 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Bphy_0433 Mandelate racemase/muconate lactonizing protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Bphy_2618 2-keto-3-deoxy-galactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D Bphy_2617 KDPG and KHG aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D Bphy_3127 glycoside hydrolase family 31 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Bphy_5238 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:bph00053]
D Bphy_0750 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Bphy_1058 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Bphy_4997 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_5161 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_4442 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_6029 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_6327 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Bphy_6342 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Bphy_4297 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6530 glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D Bphy_6527 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D Bphy_0046 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D Bphy_4216 Galactose 1-dehydrogenase K13873 araA; L-arabinose 1-dehydrogenase [EC:1.1.1.376]
D Bphy_2611 SMP-30/Gluconolaconase/LRE domain protein K13874 araB; L-arabinonolactonase [EC:3.1.1.15]
D Bphy_3451 Dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D Bphy_6714 Dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D Bphy_4215 Dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D Bphy_6711 dihydrodipicolinate synthetase K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D Bphy_4441 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Bphy_6713 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Bphy_6526 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Bphy_6531 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D Bphy_6382 galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D Bphy_5673 NAD-dependent epimerase/dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
D Bphy_5402 NAD-dependent epimerase/dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
D Bphy_6996 amidohydrolase 2 K18982 gli; D-galactarolactone isomerase [EC:5.4.1.4]
C 00500 Starch and sucrose metabolism [PATH:bph00500]
D Bphy_3127 glycoside hydrolase family 31 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Bphy_5238 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Bphy_6047 Levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D Bphy_1077 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_1592 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_2479 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_5434 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Bphy_3256 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Bphy_2378 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Bphy_1797 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Bphy_1798 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Bphy_5336 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Bphy_4391 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Bphy_3790 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Bphy_6361 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Bphy_5237 alpha amylase catalytic region K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Bphy_4392 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Bphy_4388 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Bphy_4393 alpha amylase catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D Bphy_5335 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Bphy_3520 alpha amylase catalytic region K01214 ISA; isoamylase [EC:3.2.1.68]
D Bphy_4390 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Bphy_4387 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D Bphy_4389 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Bphy_2145 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Bphy_0859 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Bphy_1048 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Bphy_0858 HAD-superfamily hydrolase, subfamily IIB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Bphy_5280 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D Bphy_7106 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D Bphy_2267 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Bphy_0625 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Bphy_1019 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Bphy_0148 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bph00520]
D Bphy_0846 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Bphy_0296 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Bphy_0293 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Bphy_2984 ATPase BadF/BadG/BcrA/BcrD type K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D Bphy_0148 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Bphy_2890 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Bphy_0294 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Bphy_0881 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Bphy_2891 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Bphy_2561 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Bphy_0735 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D Bphy_0395 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Bphy_0394 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Bphy_2761 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Bphy_0528 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Bphy_3011 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Bphy_3009 acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D Bphy_0925 glycosyl transferase family 2 K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D Bphy_0922 polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D Bphy_2995 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D Bphy_5243 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D Bphy_0625 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Bphy_2399 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D Bphy_2267 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Bphy_1077 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_1592 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_2479 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_0750 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Bphy_1058 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Bphy_2271 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_2297 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_6101 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_0260 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Bphy_1019 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Bphy_2475 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_1056 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_2283 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_3725 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_2293 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_1069 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_2471 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_6734 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_2320 NAD-dependent epimerase/dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D Bphy_2470 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Bphy_0596 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Bphy_4909 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Bphy_1797 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:bph00620]
D Bphy_1938 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_5127 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_4939 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_7028 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1850 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_7491 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_1848 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_1470 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_7029 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Bphy_7030 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Bphy_3758 alpha/beta hydrolase fold protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_7031 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_1469 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_3511 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_4538 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_5870 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_5774 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_0483 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Bphy_4997 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_3325 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_6824 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_7192 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Bphy_4796 Gluconate 2-dehydrogenase (acceptor) K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D Bphy_6799 Gluconate 2-dehydrogenase (acceptor) K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D Bphy_3250 Gluconate 2-dehydrogenase (acceptor) K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D Bphy_3686 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Bphy_6206 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Bphy_3685 Phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Bphy_0460 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Bphy_1388 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Bphy_2629 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Bphy_2630 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Bphy_4377 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Bphy_4125 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_0010 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Bphy_5077 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Bphy_4273 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D Bphy_3178 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Bphy_5492 thiamine pyrophosphate protein TPP binding domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D Bphy_5095 thiamine pyrophosphate protein TPP binding domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D Bphy_2429 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D Bphy_2513 FAD linked oxidase domain protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Bphy_0401 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Bphy_4478 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Bphy_0870 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Bphy_0120 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Bphy_6567 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_0166 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_3184 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_1251 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_0811 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_6845 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_2869 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Bphy_2604 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Bphy_4358 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Bphy_1941 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Bphy_0795 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Bphy_5925 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Bphy_2180 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Bphy_0030 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Bphy_1321 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Bphy_1099 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Bphy_1372 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Bphy_6610 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0304 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Bphy_2017 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Bphy_7741 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bph00630]
D Bphy_1368 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D Bphy_1938 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_5127 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_4939 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_7028 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1850 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1372 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Bphy_6610 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D Bphy_4358 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Bphy_0550 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Bphy_5205 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Bphy_4366 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Bphy_6878 aconitate hydratase domain protein K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Bphy_4352 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Bphy_5855 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Bphy_5926 succinyl-CoA synthetase, alpha subunit K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9]
D Bphy_5927 succinyl-CoA synthetase, beta subunit K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1131 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Bphy_6555 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Bphy_0971 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Bphy_6753 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Bphy_5924 Citrate (pro-3S)-lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Bphy_4569 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Bphy_7454 glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Bphy_2514 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Bphy_5643 glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Bphy_2515 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Bphy_5642 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Bphy_7455 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Bphy_2516 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Bphy_5641 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Bphy_7456 conserved hypothetical protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Bphy_2521 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Bphy_4001 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Bphy_5484 putative catalase K03781 katE; catalase [EC:1.11.1.6]
D Bphy_6567 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_0166 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_3184 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_1251 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_0811 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_6845 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_5928 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D Bphy_0820 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Bphy_5953 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Bphy_2697 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Bphy_6497 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Bphy_6496 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Bphy_4253 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_5929 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_2424 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_1481 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_5918 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_3572 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_6981 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_7784 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_6867 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_3303 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_5930 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_2449 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_6283 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_3005 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Bphy_5971 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_5961 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_3003 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_3004 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Bphy_1620 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D Bphy_1621 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Bphy_6215 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Bphy_6528 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Bphy_1622 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Bphy_1009 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Bphy_4927 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Bphy_5633 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D Bphy_5632 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D Bphy_5655 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Bphy_4849 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Bphy_6571 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Bphy_2579 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Bphy_0726 NAD-dependent formate dehydrogenase, delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D Bphy_0727 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Bphy_4517 molybdopterin oxidoreductase Fe4S4 region K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Bphy_4518 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Bphy_0728 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Bphy_4519 formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Bphy_4520 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Bphy_0729 NAD-dependent formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Bphy_0508 arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D Bphy_5913 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Bphy_3292 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Bphy_0336 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Bphy_1808 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D Bphy_7802 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D Bphy_3618 oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8]
C 00640 Propanoate metabolism [PATH:bph00640]
D Bphy_1938 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_5127 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_4939 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_7028 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1850 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1588 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Bphy_4273 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D Bphy_3178 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Bphy_3686 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Bphy_6206 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Bphy_3685 Phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Bphy_6075 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Bphy_6076 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Bphy_6077 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_0176 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Bphy_1204 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Bphy_3172 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_1388 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Bphy_2629 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Bphy_2630 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Bphy_4377 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Bphy_4851 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4618 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4468 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Bphy_4569 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Bphy_4693 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Bphy_0443 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Bphy_4692 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Bphy_0444 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Bphy_5681 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_5128 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_4929 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_4355 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Bphy_6707 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Bphy_6460 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D Bphy_4353 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D Bphy_6708 2-methylisocitrate dehydratase, Fe/S-dependent K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D Bphy_6709 AcnD-accessory protein PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D Bphy_5855 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Bphy_4356 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D Bphy_6706 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D Bphy_2061 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:bph00650]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1983 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Bphy_5650 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Bphy_1028 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_7224 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_0386 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_4841 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_0176 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Bphy_3511 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_4538 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_6753 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Bphy_1106 Poly-beta-hydroxybutyrate polymerase domain protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Bphy_6754 poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Bphy_0969 poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Bphy_2094 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D Bphy_4313 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D Bphy_1131 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Bphy_6555 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Bphy_0971 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Bphy_5655 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Bphy_4849 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Bphy_6571 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Bphy_7794 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Bphy_4991 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Bphy_5588 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Bphy_4363 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Bphy_5589 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Bphy_4364 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Bphy_5586 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Bphy_4361 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Bphy_5587 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Bphy_4362 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Bphy_4851 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4618 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4617 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6819 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_5440 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6572 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6851 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_4850 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_3225 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_5077 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Bphy_1609 Alcohol dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D Bphy_0165 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_4250 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_6613 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_1563 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D Bphy_1562 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D Bphy_7003 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Bphy_1961 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Bphy_5791 short-chain dehydrogenase/reductase SDR K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Bphy_5527 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Bphy_5886 putative D-(-)-3-hydroxybutyrate-oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D Bphy_5526 Acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D Bphy_3919 Acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D Bphy_5816 Alcohol dehydrogenase GroES domain protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Bphy_4893 Alcohol dehydrogenase GroES domain protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Bphy_2022 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_2084 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_5007 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_3016 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_4239 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_7490 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_2021 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Bphy_6809 short-chain dehydrogenase/reductase SDR K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:bph00660]
D Bphy_2022 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_2084 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_5007 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_3016 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_4239 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_7490 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_2021 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Bphy_4945 L-carnitine dehydratase/bile acid-inducible protein F K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D Bphy_4693 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Bphy_0443 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Bphy_4692 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Bphy_0444 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Bphy_5924 Citrate (pro-3S)-lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Bphy_6374 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Bphy_3207 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Bphy_4367 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Bphy_6199 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Bphy_4368 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Bphy_4369 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bph00562]
D Bphy_3755 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7067 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_5529 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_6939 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_1546 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7081 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_1397 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Bphy_1595 Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Bphy_1594 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Bphy_1602 Xylose isomerase domain protein TIM barrel K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D Bphy_1601 thiamine pyrophosphate protein central region K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D Bphy_1603 Myo-inositol catabolism IolB domain protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D Bphy_1600 PfkB domain protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D Bphy_5681 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_5128 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_4929 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_2011 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bph00190]
D Bphy_2009 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Bphy_2008 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Bphy_2007 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Bphy_2006 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Bphy_2005 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Bphy_2004 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Bphy_2003 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Bphy_2002 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Bphy_2001 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Bphy_2000 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Bphy_1999 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Bphy_1998 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Bphy_3973 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Bphy_1997 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Bphy_1996 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Bphy_5575 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Bphy_4420 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Bphy_1828 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Bphy_5588 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Bphy_4363 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Bphy_5589 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Bphy_4364 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Bphy_5586 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Bphy_4361 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Bphy_5587 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Bphy_4362 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Bphy_2743 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Bphy_2742 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Bphy_2741 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Bphy_0286 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Bphy_3971 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D Bphy_5827 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D Bphy_3646 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D Bphy_0281 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Bphy_5489 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Bphy_0277 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Bphy_0347 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Bphy_4793 cytochrome c oxidase, subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D Bphy_5490 cytochrome c oxidase, subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D Bphy_1618 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Bphy_0276 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Bphy_0348 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Bphy_4792 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Bphy_5491 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Bphy_0279 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Bphy_0285 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Bphy_5826 cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D Bphy_3647 cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D Bphy_3970 cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D Bphy_5825 cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D Bphy_3648 cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D Bphy_3969 cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D Bphy_5824 ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D Bphy_3968 ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D Bphy_3649 ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D Bphy_5120 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Bphy_0299 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Bphy_5697 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Bphy_4775 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Bphy_0298 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Bphy_5696 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Bphy_5119 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Bphy_0297 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D Bphy_0126 cytochrome c class I K08738 CYC; cytochrome c
D Bphy_2222 cytochrome c class I K08738 CYC; cytochrome c
D Bphy_1140 cytochrome c family protein K08738 CYC; cytochrome c
D Bphy_1122 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Bphy_3029 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Bphy_1129 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Bphy_3027 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Bphy_1121 H+transporting two-sector ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Bphy_3028 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Bphy_3030 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Bphy_1128 alternate F1F0 ATPase, F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Bphy_3026 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Bphy_1125 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Bphy_3033 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Bphy_1123 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Bphy_3031 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Bphy_1124 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Bphy_3032 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Bphy_2173 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Bphy_0890 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Bphy_3502 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_3855 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_5508 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_1162 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_6004 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:bph00710]
D Bphy_6497 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Bphy_6496 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Bphy_0459 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Bphy_2598 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Bphy_3578 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Bphy_0461 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Bphy_6494 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_5951 Fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_0685 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_5877 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Bphy_5878 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Bphy_2599 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Bphy_1693 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Bphy_6493 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Bphy_5952 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Bphy_2011 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Bphy_2696 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Bphy_5925 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Bphy_2180 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Bphy_2869 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Bphy_2604 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Bphy_4358 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:bph00680]
D Bphy_3803 conserved hypothetical protein K16256 mxaA; mxaA protein
D Bphy_3804 von Willebrand factor type A K16257 mxaC; mxaC protein
D Bphy_3805 putative MxaK-like protein K16258 mxaK; mxaK protein
D Bphy_3806 putative MxaL-like protein K16259 mxaL; mxaL protein
D Bphy_6478 PQQ-dependent dehydrogenase, methanol/ethanol family K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D Bphy_3307 formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D Bphy_0483 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Bphy_0484 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D Bphy_0727 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Bphy_4517 molybdopterin oxidoreductase Fe4S4 region K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Bphy_4518 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Bphy_0728 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Bphy_4519 formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Bphy_4520 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Bphy_0729 NAD-dependent formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Bphy_0726 NAD-dependent formate dehydrogenase, delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D Bphy_6867 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_3303 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_5930 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_2449 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_6283 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_4253 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_5929 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_2424 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_5928 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D Bphy_1439 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Bphy_5925 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Bphy_2180 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Bphy_4358 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Bphy_5926 succinyl-CoA synthetase, alpha subunit K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9]
D Bphy_5927 succinyl-CoA synthetase, beta subunit K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D Bphy_5924 Citrate (pro-3S)-lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Bphy_3578 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Bphy_0461 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Bphy_6494 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_5951 Fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_0685 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_1098 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Bphy_5960 NADH:flavin oxidoreductase/NADH oxidase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D Bphy_3812 Amine dehydrogenase K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1]
D Bphy_3809 Amine dehydrogenase K15229 mauB; methylamine dehydrogenase heavy chain [EC:1.4.9.1]
D Bphy_5919 glutamine amidotransferase class-II K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21]
D Bphy_5920 glutamate synthase alpha subunit domain protein K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]
D Bphy_5921 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D Bphy_6505 formylmethanofuran dehydrogenase subunit A K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12]
D Bphy_5934 formylmethanofuran dehydrogenase subunit A K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12]
D Bphy_5935 formylmethanofuran dehydrogenase K00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12]
D Bphy_6504 formyltransferase/hydrolase complex subunit B(FhcB) K00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12]
D Bphy_6507 formylmethanofuran dehydrogenase subunit C K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12]
D Bphy_5932 formylmethanofuran dehydrogenase subunit C K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12]
D Bphy_5933 formylmethanofuran--tetrahydromethanopterin N-formyltransferase K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]
D Bphy_6506 formylmethanofuran--tetrahydromethanopterin N-formyltransferase K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]
D Bphy_5946 methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
D Bphy_6484 methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
D Bphy_6482 Methylene-tetrahydromethanopterin dehydrogenase K10714 mtdB; methylene-tetrahydromethanopterin dehydrogenase [EC:1.5.1.-]
D Bphy_5948 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K10714 mtdB; methylene-tetrahydromethanopterin dehydrogenase [EC:1.5.1.-]
D Bphy_6487 formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D Bphy_5474 formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D Bphy_3686 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Bphy_6206 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Bphy_3685 Phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Bphy_1938 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_5127 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_4939 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_7028 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1850 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1321 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Bphy_1099 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Bphy_0266 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Bphy_2558 Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Bphy_0029 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_6028 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_6995 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_0740 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Bphy_0978 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Bphy_5936 protein of unknown function DUF201 K06914 mfnD; tyramine---L-glutamate ligase [EC:6.3.4.24]
D Bphy_6502 protein of unknown function DUF201 K06914 mfnD; tyramine---L-glutamate ligase [EC:6.3.4.24]
D Bphy_5939 protein of unknown function DUF556 K09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153]
D Bphy_6499 protein of unknown function DUF556 K09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153]
D Bphy_5938 tetrahydromethanopterin biosynthesis protein, putative kinase K07144 mfnE; 5-(aminomethyl)-3-furanmethanol phosphate kinase [EC:2.7.4.31]
D Bphy_6500 aspartate/glutamate/uridylate kinase K07144 mfnE; 5-(aminomethyl)-3-furanmethanol phosphate kinase [EC:2.7.4.31]
D Bphy_5937 H4MPT-linked C1 transfer pathway protein K07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131]
D Bphy_6501 H4MPT-linked C1 transfer pathway protein K07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131]
C 00910 Nitrogen metabolism [PATH:bph00910]
D Bphy_2337 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Bphy_6183 cyclic nucleotide-binding protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Bphy_5658 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Bphy_6184 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_6185 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_6187 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_5659 nitrite reductase (NAD(P)H), large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D Bphy_5660 nitrite reductase (NAD(P)H), small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D Bphy_7754 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Bphy_7755 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Bphy_7753 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Bphy_7808 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Bphy_6194 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Bphy_1283 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Bphy_7097 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Bphy_0157 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Bphy_5177 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_6171 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4561 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4626 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Bphy_2574 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Bphy_1481 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_5918 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_3572 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_6981 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_7784 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_2788 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Bphy_2787 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Bphy_6441 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Bphy_0179 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Bphy_3786 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Bphy_6172 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Bphy_3665 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Bphy_1176 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:bph00920]
D Bphy_0169 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D Bphy_1629 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Bphy_1628 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Bphy_1627 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Bphy_1626 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Bphy_6080 taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D Bphy_6202 NMT1/THI5 like domain protein K15551 tauA; taurine transport system substrate-binding protein
D Bphy_6082 binding-protein-dependent transport systems inner membrane component K15552 tauC; taurine transport system permease protein
D Bphy_6203 binding-protein-dependent transport systems inner membrane component K15552 tauC; taurine transport system permease protein
D Bphy_6081 ABC transporter related K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D Bphy_5229 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_4149 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_5226 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_7236 ABC sulfate ester transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_5227 Substrate-binding region of ABC-type glycine betaine transport system K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_3959 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_0955 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_1964 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_3603 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_1648 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_7235 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_7234 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_3601 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_0957 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_3961 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_1647 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_7233 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_4965 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_3602 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_0956 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_3960 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_5235 Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D Bphy_1649 Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D Bphy_3471 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D Bphy_2231 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Bphy_2232 Sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Bphy_6436 Ap4A phosphorylase II K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D Bphy_2332 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Bphy_7714 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Bphy_2233 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Bphy_6214 molybdopterin oxidoreductase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D Bphy_6213 4Fe-4S ferredoxin iron-sulfur binding domain protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D Bphy_3525 Pyrogallol hydroxytransferase K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D Bphy_6212 DMSO reductase anchor subunit (DmsC) K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D Bphy_7230 oxidoreductase molybdopterin binding K17225 soxC; sulfane dehydrogenase subunit SoxC
D Bphy_7231 cytochrome c class I K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D Bphy_5661 molybdopterin oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D Bphy_2235 Sulfite reductase (ferredoxin) K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D Bphy_5829 Sulfite reductase (ferredoxin) K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D Bphy_6238 protein of unknown function DUF442 K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Bphy_3952 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Bphy_6245 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Bphy_1395 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Bphy_4451 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Bphy_5839 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Bphy_7479 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Bphy_7783 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Bphy_0061 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Bphy_5144 alpha/beta hydrolase fold protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Bphy_4382 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Bphy_4189 selenium-binding protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D Bphy_1027 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D Bphy_4911 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D Bphy_0764 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D Bphy_3938 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D Bphy_3934 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D Bphy_0385 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bph00061]
D Bphy_1388 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Bphy_2629 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Bphy_2630 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Bphy_4377 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Bphy_0691 putative acyl-carrier protein K02078 acpP; acyl carrier protein
D Bphy_0692 phosphopantetheine-binding K02078 acpP; acyl carrier protein
D Bphy_0831 acyl carrier protein K02078 acpP; acyl carrier protein
D Bphy_0829 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Bphy_0828 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Bphy_0704 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Bphy_0700 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Bphy_0703 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Bphy_0832 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Bphy_0342 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_2062 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_1701 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_2175 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_0702 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_4948 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5822 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_0830 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5382 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5165 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_6999 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_1327 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Bphy_1384 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Bphy_3687 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Bphy_7089 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Bphy_2685 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_1704 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_5806 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4871 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_0524 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4840 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4848 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_7005 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bph00071]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0387 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_1028 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_7224 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_0386 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_0176 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Bphy_1987 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Bphy_5044 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Bphy_4072 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Bphy_1700 Protein of unknown function DUF1974 K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D Bphy_2438 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Bphy_2685 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_1704 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_5806 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4871 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_0524 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4840 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4848 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_7005 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4243 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Bphy_6979 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Bphy_3909 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Bphy_6775 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Bphy_0483 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Bphy_5870 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_5774 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:bph00100]
D Bphy_5450 Squalene/phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bph00561]
D Bphy_1009 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Bphy_4927 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4997 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_3325 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_6824 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_6364 dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D Bphy_6365 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D Bphy_0419 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Bphy_0827 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Bphy_0526 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Bphy_2322 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Bphy_0403 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Bphy_7109 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Bphy_2029 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Bphy_0758 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
C 00564 Glycerophospholipid metabolism [PATH:bph00564]
D Bphy_0270 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Bphy_0420 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Bphy_4115 Fe-S oxidoreductase-like protein K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D Bphy_0526 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Bphy_2322 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Bphy_0403 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Bphy_7109 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Bphy_2029 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Bphy_3755 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7067 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_5529 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_6939 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_1546 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7081 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_5412 Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D Bphy_0220 Glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Bphy_0007 Ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D Bphy_0008 Ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D Bphy_3475 CDP-diacylglycerol diphosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D Bphy_1333 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Bphy_6523 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Bphy_2018 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Bphy_5255 phosphatidylserine decarboxylase-related K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Bphy_2019 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Bphy_2606 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D Bphy_1216 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Bphy_1353 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Bphy_0383 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Bphy_3993 phospholipase D/Transphosphatidylase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D Bphy_0796 phospholipase D/Transphosphatidylase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D Bphy_0852 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism [PATH:bph00565]
D Bphy_3755 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7067 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_5529 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_6939 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_1546 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7081 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_5412 Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
C 00600 Sphingolipid metabolism
D Bphy_7079 putative (ceramide) glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Bphy_1180 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:bph00592]
D Bphy_0387 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:bph01040]
D Bphy_0579 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D Bphy_1017 Lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Bphy_0392 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bph00230]
D Bphy_1994 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Bphy_2267 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Bphy_7042 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Bphy_0315 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Bphy_4381 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Bphy_7471 glutamine amidotransferase class-II K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Bphy_2065 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Bphy_0576 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Bphy_2087 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D Bphy_1022 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Bphy_2487 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Bphy_0464 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Bphy_0463 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Bphy_0462 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Bphy_2576 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Bphy_2553 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Bphy_0333 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Bphy_0369 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Bphy_0959 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Bphy_6551 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Bphy_6412 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Bphy_0968 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Bphy_2644 phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Bphy_1314 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Bphy_1423 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Bphy_0666 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Bphy_0713 xanthine dehydrogenase, small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D Bphy_2422 xanthine dehydrogenase, small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D Bphy_2421 xanthine dehydrogenase, molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D Bphy_0712 xanthine dehydrogenase, molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D Bphy_4727 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D Bphy_5134 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D Bphy_4728 molybdopterin dehydrogenase FAD-binding K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D Bphy_5133 molybdopterin dehydrogenase FAD-binding K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D Bphy_5132 (2Fe-2S)-binding domain protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D Bphy_4729 (2Fe-2S)-binding domain protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D Bphy_3062 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Bphy_1312 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Bphy_0709 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D Bphy_0669 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Bphy_3305 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Bphy_2639 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Bphy_2638 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Bphy_2792 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Bphy_5215 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Bphy_0671 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Bphy_0889 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Bphy_1559 (p)ppGpp synthetase I, SpoT/RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D Bphy_5779 Tetratricopeptide TPR_4 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Bphy_3720 putative Chase2 sensor protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Bphy_1409 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Bphy_2634 PfkB domain protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D Bphy_3173 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D Bphy_4414 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D Bphy_0710 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D Bphy_3185 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D Bphy_0535 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Bphy_1505 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Bphy_6436 Ap4A phosphorylase II K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D Bphy_2321 bis(5'nucleosyl)-tetraphosphatase, ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D Bphy_2332 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Bphy_7714 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Bphy_2231 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Bphy_2232 Sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Bphy_1294 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Bphy_1299 conserved hypothetical protein K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D Bphy_1301 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D Bphy_4993 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D Bphy_4863 Hydantoin racemase-like protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D Bphy_1300 urate catabolism protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D Bphy_1298 allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D Bphy_2595 allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D Bphy_2594 Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D Bphy_1297 Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D Bphy_4294 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K16856 ugl; ureidoglycolate lyase [EC:4.3.2.3]
D Bphy_2260 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Bphy_2259 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Bphy_2258 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D Bphy_6441 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:bph00240]
D Bphy_0874 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Bphy_0873 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Bphy_2324 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Bphy_4730 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Bphy_2323 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Bphy_2567 dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Bphy_4546 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Bphy_1664 Dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Bphy_2871 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Bphy_2609 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Bphy_1336 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Bphy_1423 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Bphy_2070 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Bphy_1441 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Bphy_0745 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Bphy_0369 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Bphy_0959 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Bphy_6551 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Bphy_6412 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Bphy_2063 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Bphy_2325 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Bphy_6602 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Bphy_1477 Amidohydrolase 3 K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Bphy_2187 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Bphy_3305 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Bphy_2639 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Bphy_2638 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Bphy_1043 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Bphy_0570 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Bphy_0788 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Bphy_1535 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D Bphy_1534 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Bphy_4992 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Bphy_1532 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Bphy_1536 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_6086 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_4610 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_2450 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bph00250]
D Bphy_0582 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Bphy_5638 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_5991 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_5339 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_1624 L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Bphy_4227 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Bphy_0930 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Bphy_4253 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_5929 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_2424 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_5016 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Bphy_5639 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D Bphy_5499 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Bphy_2183 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Bphy_1409 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Bphy_2576 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Bphy_2324 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Bphy_4730 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Bphy_4851 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4618 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4617 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6819 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_5440 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6572 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6851 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_4850 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_3225 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_2788 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Bphy_2787 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Bphy_4626 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Bphy_2574 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Bphy_3018 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Bphy_1481 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_5918 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_3572 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_6981 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_7784 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_0874 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Bphy_0873 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Bphy_5773 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Bphy_2890 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Bphy_0294 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Bphy_4381 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Bphy_7471 glutamine amidotransferase class-II K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bph00260]
D Bphy_1386 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Bphy_4370 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Bphy_0931 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Bphy_4412 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D Bphy_7498 Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1]
D Bphy_0932 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Bphy_1610 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Bphy_3793 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Bphy_6867 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_3303 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_5930 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_2449 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_6283 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_4253 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_5929 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_2424 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_5928 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D Bphy_6567 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_0166 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_3184 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Bphy_1251 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_0811 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_6845 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Bphy_1009 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Bphy_4927 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Bphy_0266 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Bphy_2558 Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Bphy_0029 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_6028 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_6995 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_0740 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Bphy_0978 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Bphy_2450 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D Bphy_4159 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Bphy_4160 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D Bphy_3005 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Bphy_5971 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_5961 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_3003 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_3004 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Bphy_6284 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D Bphy_6523 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Bphy_2018 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Bphy_3310 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D Bphy_4867 glucose-methanol-choline oxidoreductase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D Bphy_3309 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D Bphy_3296 Rieske (2Fe-2S) domain protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D Bphy_6857 Rieske (2Fe-2S) domain protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D Bphy_6856 ferredoxin K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D Bphy_3295 Oxidoreductase FAD-binding domain protein K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D Bphy_3300 NADH:flavin oxidoreductase/NADH oxidase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D Bphy_3299 protein of unknown function DUF224 cysteine-rich region domain protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D Bphy_3298 Electron transfer flavoprotein alpha subunit K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D Bphy_3297 electron transfer flavoprotein beta-subunit K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D Bphy_5916 glycine cleavage T protein (aminomethyl transferase) K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D Bphy_3331 sarcosine oxidase, alpha subunit family K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D Bphy_5914 FAD dependent oxidoreductase K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D Bphy_3333 sarcosine oxidase, beta subunit family K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D Bphy_5917 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D Bphy_3330 Sarcosine oxidase gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D Bphy_5915 Sarcosine oxidase delta subunit heterotetrameric K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D Bphy_3332 Sarcosine oxidase delta subunit heterotetrameric K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D Bphy_3334 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Bphy_3015 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Bphy_0994 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Bphy_3864 ectoine utilization protein EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Bphy_0370 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Bphy_5448 Pyridoxal-5'-phosphate-dependent protein beta subunit K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D Bphy_0364 putative D-serine deaminase (d-serine dehydratase) protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D Bphy_4376 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Bphy_4374 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Bphy_7266 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D Bphy_3862 ectoine utilization protein EutD K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D Bphy_3861 ectoine utilization protein EutE K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]
D Bphy_3858 aminotransferase class-III K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
D Bphy_3859 Aldehyde Dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
C 00270 Cysteine and methionine metabolism [PATH:bph00270]
D Bphy_1395 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Bphy_4451 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Bphy_5839 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Bphy_7479 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Bphy_0977 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Bphy_5482 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Bphy_0190 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Bphy_0191 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Bphy_5470 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Bphy_0078 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Bphy_4437 autoinducer synthesis protein K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184]
D Bphy_1589 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Bphy_0968 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Bphy_5444 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_1959 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_5613 Cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Bphy_4000 putative sensor with GAF domain K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Bphy_2140 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_1917 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_3399 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_2918 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Bphy_7821 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D Bphy_5405 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D Bphy_1386 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Bphy_4370 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Bphy_0931 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Bphy_7783 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Bphy_0061 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Bphy_5144 alpha/beta hydrolase fold protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Bphy_7779 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Bphy_1572 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Bphy_7567 Cystathionine gamma-synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Bphy_6599 Cystathionine gamma-synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Bphy_4382 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Bphy_0456 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Bphy_3086 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Bphy_0258 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Bphy_0259 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Bphy_3952 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Bphy_6245 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Bphy_4358 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Bphy_5685 1-aminocyclopropane-1-carboxylate deaminase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D Bphy_3334 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Bphy_3015 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Bphy_5448 Pyridoxal-5'-phosphate-dependent protein beta subunit K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D Bphy_0754 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Bphy_0029 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_6028 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_6995 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_0740 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bph00280]
D Bphy_0456 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Bphy_3953 Glu/Leu/Phe/Val dehydrogenase dimerisation region K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Bphy_6075 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Bphy_6076 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Bphy_6077 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_0176 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Bphy_1987 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Bphy_5044 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Bphy_4072 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Bphy_3562 acyl-CoA dehydrogenase domain protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_0387 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Bphy_4569 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Bphy_5795 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Bphy_4931 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Bphy_5129 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Bphy_5799 6-phosphogluconate dehydrogenase NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Bphy_6834 6-phosphogluconate dehydrogenase NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Bphy_6835 6-phosphogluconate dehydrogenase NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Bphy_5681 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_5128 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_4929 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4468 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Bphy_3559 Carbamoyl-phosphate synthase L chain ATP-binding K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D Bphy_3561 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D Bphy_3560 Enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D Bphy_0165 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_4250 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_6613 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_1563 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D Bphy_1562 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D Bphy_7003 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bph00290]
D Bphy_0994 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Bphy_3864 ectoine utilization protein EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Bphy_0370 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Bphy_5448 Pyridoxal-5'-phosphate-dependent protein beta subunit K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D Bphy_4367 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Bphy_6199 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Bphy_4368 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Bphy_4369 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Bphy_2022 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_2084 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_5007 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_3016 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_4239 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_7490 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_2021 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Bphy_2020 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Bphy_2221 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Bphy_5037 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Bphy_0456 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Bphy_3953 Glu/Leu/Phe/Val dehydrogenase dimerisation region K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Bphy_0930 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Bphy_0304 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Bphy_2017 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bph00300]
D Bphy_0931 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Bphy_1386 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Bphy_4370 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Bphy_4731 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Bphy_6866 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Bphy_1427 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Bphy_4593 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Bphy_2591 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Bphy_1349 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Bphy_0594 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Bphy_1348 aminotransferase class I and II K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Bphy_1351 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Bphy_0996 peptidase dimerisation domain protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Bphy_0076 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Bphy_2802 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Bphy_2117 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Bphy_2678 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Bphy_2677 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bph00310]
D Bphy_3885 Aldehyde Dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D Bphy_1720 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_2438 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4617 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6819 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_5440 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6572 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6851 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_4850 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_3225 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_1614 L-carnitine dehydratase/bile acid-inducible protein F K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D Bphy_1080 protein of unknown function DUF849 K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D Bphy_5465 FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase
D Bphy_3433 FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase
D Bphy_3343 ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:bph00220]
D Bphy_6442 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Bphy_0529 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Bphy_5499 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Bphy_2183 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Bphy_3979 urea carboxylase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D Bphy_3980 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Bphy_2260 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Bphy_2259 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Bphy_2258 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D Bphy_1090 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Bphy_6443 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Bphy_5773 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Bphy_1481 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_5918 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_3572 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_6981 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_7784 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_4626 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Bphy_2574 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Bphy_6441 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Bphy_0930 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Bphy_1489 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Bphy_2663 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Bphy_0064 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Bphy_2875 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Bphy_6687 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Bphy_0594 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Bphy_0995 acetylornithine deacetylase (ArgE) K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D Bphy_6045 acetylornithine deacetylase (ArgE) K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:bph00330]
D Bphy_6282 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Bphy_7098 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Bphy_1477 Amidohydrolase 3 K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Bphy_6284 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D Bphy_6447 Lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D Bphy_2186 Lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D Bphy_6445 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Bphy_3573 aminotransferase class-III K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_0638 agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D Bphy_4842 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_0110 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_5467 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_4553 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_1785 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D Bphy_1786 arginine/ornithine succinyltransferase, alpha subunit K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D Bphy_1783 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D Bphy_1787 succinylornithine transaminase family K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D Bphy_1784 succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D Bphy_1782 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D Bphy_3597 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D Bphy_6580 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D Bphy_3567 Aldehyde Dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D Bphy_6864 Aldehyde Dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D Bphy_7055 BFD domain protein (2Fe-2S)-binding domain protein K24954 ooxA; octopine oxidase subunit A
D Bphy_7053 FAD dependent oxidoreductase K24955 ooxB; octopine oxidase subunit B
D Bphy_6863 NADP oxidoreductase coenzyme F420-dependent K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Bphy_2518 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Bphy_3018 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Bphy_2649 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Bphy_2585 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Bphy_5329 Procollagen-proline dioxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D Bphy_3344 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D Bphy_3343 ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:bph00340]
D Bphy_2760 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Bphy_1410 tRNA synthetase class II (G H P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Bphy_2751 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Bphy_2752 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Bphy_6503 histidine biosynthesis protein K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Bphy_2754 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Bphy_2755 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Bphy_2753 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Bphy_2757 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Bphy_0742 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_0312 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_2758 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_2759 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Bphy_1814 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Bphy_0696 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Bphy_5104 phenylalanine/histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Bphy_1812 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Bphy_1810 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D Bphy_1809 formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D Bphy_1808 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D Bphy_7802 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4124 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:bph00350]
D Bphy_0742 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_0312 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_2758 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_5444 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_1959 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_2866 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Bphy_3887 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Bphy_2435 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D Bphy_0307 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D Bphy_2434 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Bphy_0196 fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D Bphy_4746 tyrosinase K00505 TYR; tyrosinase [EC:1.14.18.1]
D Bphy_3815 Aldehyde dehydrogenase (NAD(+)) K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D Bphy_0483 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Bphy_5870 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_5774 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_3203 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D Bphy_6608 4-oxalocrotonate decarboxylase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D Bphy_7363 HpcH/HpaI aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D Bphy_6846 HpcH/HpaI aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D Bphy_4617 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6819 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_5440 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6572 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6851 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_4850 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_3225 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_0306 fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D Bphy_5277 Malate/L-lactate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:bph00360]
D Bphy_3815 Aldehyde dehydrogenase (NAD(+)) K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D Bphy_2693 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Bphy_2692 phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D Bphy_2857 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D Bphy_2858 phenylacetate-CoA oxygenase, PaaH subunit K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D Bphy_2859 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D Bphy_2860 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D Bphy_2861 phenylacetate-CoA oxygenase/reductase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D Bphy_2691 phenylacetate degradation, enoyl-CoA hydratase paaB K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_1983 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Bphy_5650 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Bphy_0742 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_0312 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_2758 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_5444 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_1959 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_2866 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Bphy_3887 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Bphy_4708 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Bphy_0765 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Bphy_5277 Malate/L-lactate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D Bphy_4842 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_0110 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_5467 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_4553 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_4231 Rieske (2Fe-2S) domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D Bphy_7180 Rieske (2Fe-2S) domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D Bphy_6777 Rieske (2Fe-2S) domain protein, MocE subfamily K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D Bphy_3908 Rieske (2Fe-2S) domain protein, MocE subfamily K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D Bphy_4243 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Bphy_6979 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Bphy_3909 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Bphy_6775 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Bphy_4535 monooxygenase FAD-binding K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D Bphy_3513 monooxygenase FAD-binding K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D Bphy_4050 monooxygenase FAD-binding K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D Bphy_4192 monooxygenase FAD-binding K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D Bphy_4536 Extradiol ring-cleavage dioxygenase class III protein subunit B K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16]
D Bphy_4541 alpha/beta hydrolase fold protein K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D Bphy_1231 putative hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_4537 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_3512 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_4255 2-keto-4-pentenoate hydratase-like protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_3510 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Bphy_4539 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Bphy_3511 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_4538 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:bph00380]
D Bphy_0506 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D Bphy_0508 arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D Bphy_0507 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D Bphy_1720 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_2438 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5177 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_6171 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4561 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_7769 amine oxidase K00466 iaaM; tryptophan 2-monooxygenase [EC:1.13.12.3]
D Bphy_4842 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_0110 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_5467 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_4553 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_3235 Amidase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
D Bphy_3474 Amidase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
D Bphy_7768 Amidase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
D Bphy_2521 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Bphy_4001 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Bphy_5484 putative catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bph00400]
D Bphy_4110 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Bphy_2510 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Bphy_2793 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Bphy_5767 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Bphy_6025 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Bphy_2628 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Bphy_1081 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D Bphy_6024 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Bphy_2622 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Bphy_2794 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Bphy_0744 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Bphy_1569 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Bphy_2698 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Bphy_2699 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Bphy_2700 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Bphy_4373 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Bphy_2701 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Bphy_4376 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Bphy_4374 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Bphy_0678 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D Bphy_7813 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D Bphy_0741 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Bphy_0743 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Bphy_3024 Arogenate dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D Bphy_0742 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_0312 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_2758 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_5444 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_1959 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:bph00410]
D Bphy_2198 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Bphy_4851 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4618 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2197 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Bphy_1535 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D Bphy_1534 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Bphy_4992 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Bphy_1532 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Bphy_1536 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_6086 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_4610 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_4468 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_0176 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Bphy_5681 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_5128 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Bphy_4929 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:bph00430]
D Bphy_4543 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_1616 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_3857 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_6648 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_5016 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Bphy_4626 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Bphy_6225 protein of unknown function DUF1486 K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-]
D Bphy_6224 FAD dependent oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-]
D Bphy_6210 sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D Bphy_6205 sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D Bphy_6206 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Bphy_3685 Phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Bphy_3686 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Bphy_6217 AMP-dependent synthetase and ligase K26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-]
D Bphy_6218 Aldehyde Dehydrogenase K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81]
C 00440 Phosphonate and phosphinate metabolism [PATH:bph00440]
D Bphy_3822 phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D Bphy_3821 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D Bphy_5070 phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]
D Bphy_5071 phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
D Bphy_6228 phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
D Bphy_7778 aminotransferase class V K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D Bphy_3820 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D Bphy_5064 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D Bphy_3775 phosphonate metabolism protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D Bphy_3773 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D Bphy_3774 phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D Bphy_3778 phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D Bphy_3779 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D Bphy_3776 phosphonate metabolism PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:bph00450]
D Bphy_0977 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Bphy_5482 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Bphy_0190 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Bphy_0191 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Bphy_5470 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Bphy_5613 Cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Bphy_6889 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Bphy_6635 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Bphy_0634 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Bphy_4265 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Bphy_3740 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Bphy_5709 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Bphy_4599 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Bphy_2231 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Bphy_2232 Sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Bphy_4627 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Bphy_4522 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Bphy_2191 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bph00460]
D Bphy_5434 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Bphy_5177 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_6171 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4561 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4543 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_1616 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_3857 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_6648 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_1624 L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Bphy_4227 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Bphy_6867 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_3303 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_5930 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_2449 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_6283 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bph00470]
D Bphy_1359 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Bphy_2671 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Bphy_7633 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Bphy_5773 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Bphy_1943 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Bphy_2675 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Bphy_5638 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_5991 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_5339 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_0364 putative D-serine deaminase (d-serine dehydratase) protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D Bphy_0076 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Bphy_2802 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Bphy_3431 ornithine cyclodeaminase/mu-crystallin K19744 dauB; L-arginine dehydrogenase [EC:1.4.1.25]
D Bphy_3344 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D Bphy_4667 proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D Bphy_4670 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
D Bphy_4668 FAD dependent oxidoreductase K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
D Bphy_4669 ferredoxin K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D Bphy_6587 putative NAD(FAD)-dependent dehydrogenase K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D Bphy_4666 dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D Bphy_4441 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Bphy_6713 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Bphy_6526 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D Bphy_4708 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Bphy_0765 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:bph00480]
D Bphy_4543 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_1616 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_3857 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_6648 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_0409 ChaC family protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D Bphy_2362 5-oxoprolinase (ATP-hydrolyzing) K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D Bphy_2905 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Bphy_2903 Allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D Bphy_2904 urea amidolyase related protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D Bphy_3064 glutamate--cysteine ligase GCS2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D Bphy_5194 glutamate--cysteine ligase GCS2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D Bphy_3086 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Bphy_0258 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Bphy_0259 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Bphy_2225 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Bphy_0686 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Bphy_1257 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_2548 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_5568 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_5453 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_1982 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_0144 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_2898 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_4314 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_3352 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_5865 Glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_5456 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Bphy_0565 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Bphy_4715 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Bphy_0627 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_3342 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_2400 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_1354 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Bphy_3218 Redoxin domain protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D Bphy_2667 Redoxin domain protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D Bphy_6445 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D Bphy_2992 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2993 Tetratricopeptide TPR_2 repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2996 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2997 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:bph00540]
D Bphy_1326 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Bphy_2666 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Bphy_1328 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Bphy_1394 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Bphy_1325 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Bphy_0538 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Bphy_0331 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Bphy_1440 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Bphy_0330 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Bphy_0536 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Bphy_2264 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Bphy_0077 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Bphy_0302 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Bphy_0124 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Bphy_0751 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Bphy_0404 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Bphy_5249 hydrolase, HAD-superfamily, subfamily IIIA K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Bphy_0201 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Bphy_0752 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Bphy_2266 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Bphy_0661 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Bphy_0454 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Bphy_3924 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D Bphy_2075 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bph00541]
D Bphy_1077 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_1592 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_2479 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Bphy_2271 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_2297 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_6101 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Bphy_0750 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Bphy_1058 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Bphy_2318 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Bphy_6726 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Bphy_2319 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Bphy_6725 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Bphy_2317 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Bphy_2316 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Bphy_1969 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Bphy_0596 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Bphy_4909 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Bphy_2475 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_1056 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_2283 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_3725 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_2293 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Bphy_1069 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_2471 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_6734 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Bphy_2320 NAD-dependent epimerase/dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D Bphy_2470 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Bphy_2891 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Bphy_3011 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Bphy_3009 acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
C 00550 Peptidoglycan biosynthesis [PATH:bph00550]
D Bphy_2761 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Bphy_0528 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Bphy_2672 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Bphy_2675 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Bphy_2678 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Bphy_2671 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Bphy_7633 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Bphy_2677 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Bphy_1334 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Bphy_0902 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Bphy_0605 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Bphy_7181 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Bphy_2676 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Bphy_2673 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Bphy_2621 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Bphy_1268 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_3899 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_2799 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_0941 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Bphy_0049 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Bphy_3824 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Bphy_2679 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Bphy_0212 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Bphy_0468 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:bph00552]
D Bphy_0902 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Bphy_0605 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Bphy_7181 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bph00543]
D Bphy_2468 glycosyl transferase group 1 K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D Bphy_2466 Acetyltransferase (isoleucine patch superfamily)-like protein K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D Bphy_3271 satase isoform II K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-]
D Bphy_1395 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Bphy_4451 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Bphy_1676 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
D Bphy_1683 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
D Bphy_2281 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
D Bphy_1688 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bph00730]
D Bphy_1518 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Bphy_1361 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Bphy_2331 Phosphomethylpyrimidine kinase type-1 K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Bphy_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Bphy_2774 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Bphy_3948 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Bphy_2772 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Bphy_2771 Thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Bphy_2605 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Bphy_0776 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Bphy_0535 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bph00740]
D Bphy_3240 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Bphy_0619 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Bphy_0621 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Bphy_0417 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D Bphy_0618 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Bphy_0620 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Bphy_0575 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Bphy_3471 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D Bphy_3158 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D Bphy_1994 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Bphy_2724 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:bph00750]
D Bphy_0514 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Bphy_4756 pyridoxamine 5'-phosphate oxidase-related FMN-binding K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Bphy_1799 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Bphy_6534 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D Bphy_0740 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Bphy_0398 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Bphy_0844 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Bphy_7498 Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1]
D Bphy_0932 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bph00760]
D Bphy_0582 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Bphy_4240 Aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D Bphy_0580 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Bphy_0581 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Bphy_0808 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Bphy_0369 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Bphy_0959 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Bphy_6551 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Bphy_2067 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Bphy_3717 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D Bphy_4778 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Bphy_2169 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Bphy_2607 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Bphy_4777 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Bphy_1029 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Bphy_2504 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Bphy_2542 NAD/NADP transhydrogenase alpha subunit-like protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Bphy_2543 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Bphy_2541 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Bphy_5704 (2Fe-2S)-binding domain protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D Bphy_5703 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D Bphy_7794 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Bphy_4991 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Bphy_4617 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6819 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_5440 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6572 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_6851 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_4850 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Bphy_3225 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bph00770]
D Bphy_2022 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_2084 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_5007 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_3016 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_4239 thiamine pyrophosphate protein domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_7490 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Bphy_2021 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Bphy_2020 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Bphy_2221 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Bphy_5037 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Bphy_2494 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Bphy_6159 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Bphy_6020 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Bphy_4498 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Bphy_5446 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Bphy_3920 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Bphy_3612 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Bphy_2197 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Bphy_0203 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Bphy_0572 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Bphy_0310 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Bphy_2658 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Bphy_0845 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Bphy_1671 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Bphy_0456 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Bphy_1535 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D Bphy_1534 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Bphy_4992 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Bphy_1532 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Bphy_1536 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_6086 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_4610 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Bphy_2198 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:bph00780]
D Bphy_0274 Methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Bphy_0704 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Bphy_0700 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Bphy_0703 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Bphy_0832 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Bphy_0342 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_2062 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_1701 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_2175 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_0702 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_4948 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5822 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_0830 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5382 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5165 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_6999 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_1327 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Bphy_1384 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Bphy_3687 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Bphy_0172 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Bphy_0173 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Bphy_0171 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Bphy_0170 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Bphy_0204 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bph00785]
D Bphy_0216 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Bphy_0217 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Bphy_3757 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_7491 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_1848 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_1470 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Bphy_7029 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Bphy_7030 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Bphy_3758 alpha/beta hydrolase fold protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_7031 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_1469 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Bphy_1721 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Bphy_6318 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Bphy_1720 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Bphy_6075 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Bphy_6076 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Bphy_6077 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Bphy_3005 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Bphy_5971 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_5961 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_3003 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_3004 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bph00790]
D Bphy_4454 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Bphy_3947 protein of unknown function DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D Bphy_0382 NUDIX hydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D Bphy_2893 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Bphy_3329 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Bphy_5943 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Bphy_6489 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Bphy_2492 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Bphy_0880 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Bphy_0782 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Bphy_4378 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Bphy_3240 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Bphy_0619 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Bphy_2495 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Bphy_0045 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Bphy_3055 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Bphy_6480 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Bphy_7690 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Bphy_0044 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Bphy_0043 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Bphy_0368 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Bphy_5949 beta-ribofuranosylaminobenzene 5'-phosphate synthase family K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D Bphy_6481 beta-ribofuranosylaminobenzene 5'-phosphate synthase family K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D Bphy_5942 flavoprotein K18853 dmrX; dihydromethanopterin reductase (acceptor) [EC:1.5.99.15]
D Bphy_5945 alpha-L-glutamate ligase, RimK family K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D Bphy_6485 alpha-L-glutamate ligase, RimK family K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D Bphy_0817 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Bphy_0449 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Bphy_0935 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Bphy_0779 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Bphy_5168 hypothetical protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Bphy_0933 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Bphy_0815 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Bphy_4726 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D Bphy_0816 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:bph00670]
D Bphy_0782 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Bphy_1475 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Bphy_5922 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Bphy_6867 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_3303 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_5930 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_2449 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_6283 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Bphy_0576 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Bphy_2553 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Bphy_0036 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Bphy_0924 formyl transferase domain protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Bphy_5971 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_5961 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_3003 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Bphy_0190 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Bphy_0191 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Bphy_0788 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Bphy_5913 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Bphy_3292 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Bphy_0336 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Bphy_2916 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Bphy_2901 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bph00860]
D Bphy_1377 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Bphy_2720 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Bphy_6167 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Bphy_0622 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Bphy_2809 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Bphy_2179 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Bphy_3023 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Bphy_2066 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Bphy_0602 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Bphy_7706 Coproporphyrinogen dehydrogenase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Bphy_2584 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Bphy_2502 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Bphy_2178 protein of unknown function DUF513 hemX K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Bphy_3154 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Bphy_2230 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Bphy_3697 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Bphy_0286 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Bphy_0285 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Bphy_2228 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Bphy_3145 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Bphy_3143 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D Bphy_3146 precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D Bphy_3139 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Bphy_3155 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D Bphy_3140 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D Bphy_3141 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Bphy_3142 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D Bphy_3144 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Bphy_3157 CobB/CobQ domain protein glutamine amidotransferase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Bphy_3152 cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Bphy_6209 Cobaltochelatase K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D Bphy_6208 Cobaltochelatase K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D Bphy_2512 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Bphy_3156 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Bphy_2203 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Bphy_0774 cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Bphy_2205 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Bphy_2206 L-threonine-O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D Bphy_2204 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Bphy_2209 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Bphy_2210 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Bphy_2208 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Bphy_3151 Magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Bphy_0115 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Bphy_1942 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D Bphy_2408 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D Bphy_1509 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bph00130]
D Bphy_4073 thioesterase superfamily protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D Bphy_2111 Chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D Bphy_2519 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Bphy_0614 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Bphy_2724 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Bphy_2707 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D Bphy_0736 ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Bphy_2550 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Bphy_0374 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Bphy_2683 conserved hypothetical protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D Bphy_2874 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Bphy_1576 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Bphy_3669 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Bphy_6079 NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Bphy_2866 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Bphy_3887 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bph00900]
D Bphy_3948 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Bphy_1332 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Bphy_0998 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Bphy_0316 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Bphy_0999 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Bphy_1420 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Bphy_4130 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Bphy_0587 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_2724 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Bphy_3949 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Bphy_2653 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Bphy_1334 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Bphy_0777 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:bph00909]
D Bphy_5450 Squalene/phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D Bphy_4137 squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:bph00906]
D Bphy_1006 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:bph00903]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_0360 Alpha/beta hydrolase fold-3 domain protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:bph00907]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_0165 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_4250 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_6613 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Bphy_0387 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Bphy_5877 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Bphy_5878 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Bphy_2599 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bph00523]
D Bphy_2318 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Bphy_6726 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Bphy_2319 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Bphy_6725 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Bphy_2317 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Bphy_2316 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Bphy_1969 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Bphy_6728 NAD-dependent epimerase/dehydratase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures [PATH:bph01054]
D Bphy_5638 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_5991 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_5339 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Bphy_2319 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Bphy_6725 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:bph00946]
D Bphy_5434 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:bph00311]
D Bphy_4181 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Bphy_2229 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Bphy_1164 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:bph00332]
D Bphy_2649 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Bphy_2585 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bph00261]
D Bphy_4046 MbtH domain protein K05375 mbtH; MbtH protein
D Bphy_2231 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Bphy_2232 Sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Bphy_1386 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Bphy_4370 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Bphy_4731 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Bphy_6866 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Bphy_1427 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Bphy_4593 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Bphy_2591 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bph00521]
D Bphy_0625 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Bphy_2267 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Bphy_1397 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Bphy_1595 Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Bphy_1594 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Bphy_2318 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Bphy_6726 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Bphy_2319 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Bphy_6725 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Bphy_2317 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Bphy_2316 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Bphy_1969 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Bphy_0625 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:bph00525]
D Bphy_2318 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Bphy_6726 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Bphy_2319 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Bphy_6725 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bph00401]
D Bphy_0743 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Bphy_0742 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_0312 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_2758 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_5444 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_1959 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Bphy_2698 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Bphy_2699 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Bphy_0829 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Bphy_0342 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_2062 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_1701 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_2175 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_0702 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_4948 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5822 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_0830 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5382 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5165 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_6999 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_1384 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Bphy_3687 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:bph00998]
D Bphy_0691 putative acyl-carrier protein K02078 acpP; acyl carrier protein
D Bphy_0692 phosphopantetheine-binding K02078 acpP; acyl carrier protein
D Bphy_0831 acyl carrier protein K02078 acpP; acyl carrier protein
D Bphy_3822 phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D Bphy_3821 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bph00999]
D Bphy_0078 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Bphy_6024 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Bphy_2622 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Bphy_5434 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D Bphy_4035 conserved hypothetical protein K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D Bphy_4037 conserved hypothetical protein K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:bph00362]
D Bphy_5352 benzoate 1,2-dioxygenase, large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D Bphy_5351 benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D Bphy_5350 Oxidoreductase FAD-binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D Bphy_6093 Oxidoreductase FAD-binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D Bphy_5349 short-chain dehydrogenase/reductase SDR K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D Bphy_4028 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D Bphy_4029 muconate and chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D Bphy_4027 muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D Bphy_4460 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D Bphy_0193 alpha/beta hydrolase fold protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D Bphy_4457 3-oxoacid CoA-transferase, A subunit K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D Bphy_4458 3-oxoacid CoA-transferase, B subunit K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D Bphy_0387 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Bphy_2690 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D Bphy_3767 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D Bphy_1231 putative hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_4537 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_3512 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_4255 2-keto-4-pentenoate hydratase-like protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_3510 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Bphy_4539 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Bphy_3511 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_4538 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_6795 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_5684 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_3369 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_7095 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_6459 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_6458 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_5624 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D Bphy_5623 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D Bphy_3890 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D Bphy_3889 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D Bphy_4459 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D Bphy_4461 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Bphy_5221 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Bphy_0944 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Bphy_6793 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Bphy_5797 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Bphy_3205 protocatechuate 4,5-dioxygenase, alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Bphy_3204 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D Bphy_3203 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D Bphy_3206 amidohydrolase 2 K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D Bphy_3209 protein of unknown function DUF453 K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D Bphy_3208 amidohydrolase 2 K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D Bphy_6375 amidohydrolase 2 K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D Bphy_6374 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Bphy_3207 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Bphy_4014 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D Bphy_4456 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D Bphy_4073 thioesterase superfamily protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D Bphy_1543 benzoate-CoA ligase family K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D Bphy_1028 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_7224 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_0386 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Bphy_2438 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Bphy_1983 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Bphy_5650 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1538 benzoyl-CoA oxygenase/reductase, BoxA protein K15511 boxA; benzoyl-CoA 2,3-epoxidase subunit A [EC:1.14.13.208]
D Bphy_1539 benzoyl-CoA oxygenase component B (BoxB) K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208]
D Bphy_1540 benzoyl-CoA-dihydrodiol lyase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
C 00627 Aminobenzoate degradation [PATH:bph00627]
D Bphy_4842 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_0110 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_5467 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_4553 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_5177 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_6171 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4561 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4125 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Bphy_1543 benzoate-CoA ligase family K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D Bphy_6162 L-lactate dehydrogenase (cytochrome) K15054 mdlB; (S)-mandelate dehydrogenase [EC:1.1.99.31]
D Bphy_5156 L-lactate dehydrogenase (cytochrome) K15054 mdlB; (S)-mandelate dehydrogenase [EC:1.1.99.31]
D Bphy_6157 thiamine pyrophosphate protein TPP binding domain protein K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D Bphy_6158 Aldehyde Dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D Bphy_6383 Phenol hydroxylase domain protein dimerisation K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D Bphy_2724 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Bphy_4075 AMP-dependent synthetase and ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D Bphy_4068 NADH:flavin oxidoreductase/NADH oxidase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D Bphy_4880 ferredoxin K03863 vanB; vanillate monooxygenase ferredoxin subunit
D Bphy_3205 protocatechuate 4,5-dioxygenase, alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Bphy_3204 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D Bphy_3203 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D Bphy_3206 amidohydrolase 2 K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D Bphy_6377 Protocatechuate 4,5-dioxygenase K04099 desB; gallate dioxygenase [EC:1.13.11.57]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:bph00364]
D Bphy_5352 benzoate 1,2-dioxygenase, large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D Bphy_5351 benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D Bphy_5350 Oxidoreductase FAD-binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D Bphy_6093 Oxidoreductase FAD-binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D Bphy_5349 short-chain dehydrogenase/reductase SDR K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D Bphy_4028 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D Bphy_4061 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_4421 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_0111 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_4029 muconate and chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D Bphy_5623 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:bph00625]
D Bphy_5870 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_5774 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_0483 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Bphy_4653 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5796 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_1284 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4949 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_2174 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6577 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3706 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6594 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7406 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4700 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_5622 Aldehyde dehydrogenase (NAD(+)) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_3198 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_4836 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_6842 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Bphy_7755 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Bphy_7753 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Bphy_7808 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Bphy_7754 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Bphy_3307 formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D Bphy_7192 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Bphy_0158 alpha/beta hydrolase fold protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D Bphy_1371 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_5600 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_5842 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_6593 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_2715 HAD-superfamily hydrolase, subfamily IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_6165 Haloacid dehalogenase domain protein hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:bph00361]
D Bphy_4028 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D Bphy_4061 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_4421 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_0111 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_5623 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D Bphy_5624 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D Bphy_4029 muconate and chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D Bphy_1371 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_5600 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_5842 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_6593 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_2715 HAD-superfamily hydrolase, subfamily IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_6165 Haloacid dehalogenase domain protein hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Bphy_0158 alpha/beta hydrolase fold protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:bph00623]
D Bphy_6383 Phenol hydroxylase domain protein dimerisation K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D Bphy_6158 Aldehyde Dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D Bphy_1706 FAD linked oxidase domain protein K05797 pchF; 4-cresol dehydrogenase (hydroxylating) flavoprotein subunit [EC:1.17.9.1]
D Bphy_4028 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D Bphy_4029 muconate and chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D Bphy_4061 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_4421 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_0111 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Bphy_5623 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation [PATH:bph00622]
D Bphy_6158 Aldehyde Dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D Bphy_5352 benzoate 1,2-dioxygenase, large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D Bphy_5351 benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D Bphy_5350 Oxidoreductase FAD-binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D Bphy_6093 Oxidoreductase FAD-binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D Bphy_5349 short-chain dehydrogenase/reductase SDR K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D Bphy_6795 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_5684 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_3369 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_7095 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_6459 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_6458 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_1231 putative hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_4537 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_3512 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_4255 2-keto-4-pentenoate hydratase-like protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_3510 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Bphy_4539 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Bphy_3511 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_4538 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation [PATH:bph00633]
D Bphy_6900 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D Bphy_7264 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Bphy_7265 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D Bphy_0387 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:bph00643]
D Bphy_3815 Aldehyde dehydrogenase (NAD(+)) K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D Bphy_2435 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D Bphy_0307 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D Bphy_2434 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Bphy_0196 fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D Bphy_4842 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_0110 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_5467 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_4553 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Bphy_5177 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_6171 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4561 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Bphy_4273 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation [PATH:bph00791]
D Bphy_3980 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Bphy_3979 urea carboxylase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D Bphy_2260 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Bphy_2259 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Bphy_2258 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:bph00930]
D Bphy_5161 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_4442 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_6029 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_0360 Alpha/beta hydrolase fold-3 domain protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D Bphy_4997 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_3683 acyl-CoA dehydrogenase domain protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D Bphy_2688 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:bph00621]
D Bphy_6795 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_5684 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_3369 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_7095 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_6459 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_6458 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Bphy_1231 putative hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_4537 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_3512 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_4255 2-keto-4-pentenoate hydratase-like protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D Bphy_3510 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Bphy_4539 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Bphy_3511 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D Bphy_4538 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:bph00626]
D Bphy_5870 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_5774 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Bphy_0483 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:bph00624]
D Bphy_3201 Phthalate 4,5-dioxygenase K18068 pht3; phthalate 4,5-dioxygenase [EC:1.14.12.7]
D Bphy_4881 Rieske (2Fe-2S) domain protein K18068 pht3; phthalate 4,5-dioxygenase [EC:1.14.12.7]
D Bphy_4882 Phthalate 4,5-dioxygenase K18068 pht3; phthalate 4,5-dioxygenase [EC:1.14.12.7]
D Bphy_6982 Phthalate 4,5-dioxygenase K18068 pht3; phthalate 4,5-dioxygenase [EC:1.14.12.7]
D Bphy_3205 protocatechuate 4,5-dioxygenase, alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Bphy_3204 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D Bphy_3890 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D Bphy_3889 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation [PATH:bph00365]
D Bphy_6668 glucose-methanol-choline oxidoreductase K16873 hmfH; 5-(hydroxymethyl)furfural/furfural oxidase [EC:1.1.3.47 1.1.3.-]
D Bphy_6576 glucose-methanol-choline oxidoreductase K16873 hmfH; 5-(hydroxymethyl)furfural/furfural oxidase [EC:1.1.3.47 1.1.3.-]
D Bphy_6675 UbiD family decarboxylase K16874 hmfF; 2,5-furandicarboxylate decarboxylase 1
D Bphy_6674 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16875 hmfG; 2,5-furandicarboxylate decarboxylase 2
D Bphy_6670 AMP-dependent synthetase and ligase K16876 hmfD; 2-furoate---CoA ligase [EC:6.2.1.31]
D Bphy_6673 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K16877 hmfA; 2-furoyl-CoA dehydrogenase large subunit [EC:1.3.99.8]
D Bphy_6672 Carbon-monoxide dehydrogenase (acceptor) K16878 hmfB; 2-furoyl-CoA dehydrogenase FAD binding subunit [EC:1.3.99.8]
D Bphy_6671 (2Fe-2S)-binding domain protein K16879 hmfC; 2-furoyl-CoA dehydrogenase 2Fe-2S iron sulfur subunit [EC:1.3.99.8]
D Bphy_6669 Enoyl-CoA hydratase/isomerase K16880 hmfE; 2-oxoglutaroyl-CoA hydrolase
C 00984 Steroid degradation [PATH:bph00984]
D Bphy_5113 glucose-methanol-choline oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D Bphy_7441 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D Bphy_3515 alpha/beta hydrolase fold protein K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bph03020]
D Bphy_2848 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Bphy_2847 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Bphy_2813 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Bphy_0670 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D Bphy_5309 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bph03010]
D Bphy_0746 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Bphy_1338 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Bphy_2834 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Bphy_2814 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Bphy_2822 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Bphy_0911 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Bphy_2844 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Bphy_2825 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Bphy_2563 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Bphy_2841 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Bphy_2815 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Bphy_2845 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Bphy_2816 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Bphy_2826 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Bphy_2014 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Bphy_0769 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Bphy_2831 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Bphy_0913 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Bphy_2836 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Bphy_0531 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Bphy_3944 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Bphy_2987 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Bphy_2851 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Bphy_2837 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Bphy_2840 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Bphy_2839 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Bphy_2827 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Bphy_2824 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Bphy_2849 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Bphy_0914 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Bphy_2850 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Bphy_2852 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Bphy_2564 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Bphy_2829 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Bphy_2820 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Bphy_2833 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Bphy_2812 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Bphy_2823 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Bphy_0772 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Bphy_1555 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Bphy_2652 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Bphy_2835 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Bphy_2838 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Bphy_2828 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Bphy_0314 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Bphy_2651 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Bphy_0584 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Bphy_2832 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Bphy_2821 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Bphy_0947 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Bphy_0826 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Bphy_0583 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Bphy_3101 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Bphy_1556 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Bphy_2817 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Bphy_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bph00970]
D Bphy_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0077 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0066 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0073 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0063 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0033 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Bphy_R0034 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Bphy_R0046 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Bphy_R0048 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Bphy_R0043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Bphy_R0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Bphy_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Bphy_R0047 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Bphy_R0049 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Bphy_R0071 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Bphy_R0027 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Bphy_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Bphy_R0036 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Bphy_R0055 tRNA-His K14226 tRNA-His; tRNA His
D Bphy_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0078 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0074 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0079 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0067 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0061 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0081 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0026 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0062 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0064 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Bphy_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Bphy_R0025 tRNA-Met K14230 tRNA-Met; tRNA Met
D Bphy_R0052 tRNA-Met K14230 tRNA-Met; tRNA Met
D Bphy_R0056 tRNA-Met K14230 tRNA-Met; tRNA Met
D Bphy_R0021 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Bphy_R0065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Bphy_R0053 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Bphy_R0039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Bphy_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Bphy_R0051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Bphy_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Bphy_R0059 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Bphy_R0070 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Bphy_R0032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Bphy_R0068 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Bphy_R0069 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Bphy_R0072 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Bphy_R0038 tRNA-Val K14237 tRNA-Val; tRNA Val
D Bphy_R0042 tRNA-Val K14237 tRNA-Val; tRNA Val
D Bphy_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val
D Bphy_R0076 tRNA-Val K14237 tRNA-Val; tRNA Val
D Bphy_1377 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Bphy_0054 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Bphy_0715 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Bphy_7797 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Bphy_0055 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Bphy_0053 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Bphy_0907 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Bphy_1613 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Bphy_0381 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Bphy_0406 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Bphy_0405 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Bphy_1558 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Bphy_0642 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Bphy_4522 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Bphy_6692 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Bphy_1390 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Bphy_3133 conserved hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D Bphy_2191 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Bphy_0036 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Bphy_0924 formyl transferase domain protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Bphy_1591 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Bphy_2588 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Bphy_0574 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Bphy_1450 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Bphy_0188 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Bphy_2646 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Bphy_1419 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Bphy_1554 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Bphy_1553 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Bphy_2560 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Bphy_1429 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bph03060]
D Bphy_2819 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Bphy_2854 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Bphy_2010 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Bphy_2527 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Bphy_2528 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Bphy_2526 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Bphy_3098 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Bphy_2664 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Bphy_0269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Bphy_2643 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Bphy_R0002 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Bphy_0308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Bphy_2748 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Bphy_2747 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Bphy_2746 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Bphy_0840 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Bphy_1665 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Bphy_0573 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bph04122]
D Bphy_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Bphy_3952 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Bphy_6245 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Bphy_1593 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Bphy_2545 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Bphy_0935 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Bphy_0817 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Bphy_0934 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Bphy_0263 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Bphy_0449 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Bphy_0779 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Bphy_5168 hypothetical protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Bphy_2773 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:bph03018]
D Bphy_2647 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Bphy_0818 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Bphy_1439 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Bphy_2013 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Bphy_0426 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Bphy_2082 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Bphy_5193 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Bphy_1697 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Bphy_4797 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Bphy_2846 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Bphy_0949 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Bphy_2497 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Bphy_2333 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_1113 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_1711 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Bphy_1415 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Bphy_0890 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Bphy_3502 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_3855 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_5508 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_1162 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_6004 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_2491 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bph03030]
D Bphy_0677 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_0867 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_2079 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Bphy_0951 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Bphy_1044 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Bphy_2586 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Bphy_2224 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Bphy_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Bphy_0915 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Bphy_3942 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Bphy_0341 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Bphy_0868 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Bphy_1324 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Bphy_4419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Bphy_1343 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bph03410]
D Bphy_2097 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Bphy_2703 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Bphy_0320 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Bphy_3243 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Bphy_0319 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Bphy_3087 AlkA domain protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Bphy_1389 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Bphy_2985 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Bphy_7198 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Bphy_5004 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Bphy_1363 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Bphy_5408 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Bphy_1310 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Bphy_0057 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Bphy_1478 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Bphy_5537 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Bphy_4419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Bphy_1448 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Bphy_1343 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bph03420]
D Bphy_0997 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Bphy_1549 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Bphy_0339 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Bphy_6320 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Bphy_1958 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Bphy_0851 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Bphy_1590 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Bphy_0801 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Bphy_4419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Bphy_1343 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Bphy_5309 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:bph03430]
D Bphy_1399 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Bphy_2485 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Bphy_1590 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Bphy_0801 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Bphy_0539 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Bphy_3950 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Bphy_1448 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Bphy_0341 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Bphy_2079 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Bphy_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Bphy_0951 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Bphy_2586 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Bphy_1044 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Bphy_0677 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_0867 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_2224 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Bphy_1343 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bph03440]
D Bphy_1448 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Bphy_0341 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Bphy_0843 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Bphy_0953 recombination protein RecR K06187 recR; recombination protein RecR
D Bphy_0440 recA protein K03553 recA; recombination protein RecA
D Bphy_4419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Bphy_2556 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Bphy_2557 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Bphy_2554 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Bphy_2523 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Bphy_1748 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Bphy_1749 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Bphy_1747 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Bphy_2079 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Bphy_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Bphy_0951 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Bphy_2586 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Bphy_1044 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Bphy_0677 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_0867 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_2224 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Bphy_3022 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Bphy_0912 putative primosomal replication protein N, PriB K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:bph03450]
D Bphy_0980 Ku protein K10979 ku; DNA end-binding protein Ku
D Bphy_5208 Ku protein K10979 ku; DNA end-binding protein Ku
D Bphy_4772 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Bphy_7582 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Bphy_0981 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D Bphy_2992 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2993 Tetratricopeptide TPR_2 repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2996 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2997 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:bph03250]
D Bphy_1392 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bph02010]
D Bphy_0169 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D Bphy_1629 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Bphy_1628 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Bphy_1627 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Bphy_1626 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Bphy_6080 taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D Bphy_6202 NMT1/THI5 like domain protein K15551 tauA; taurine transport system substrate-binding protein
D Bphy_6082 binding-protein-dependent transport systems inner membrane component K15552 tauC; taurine transport system permease protein
D Bphy_6203 binding-protein-dependent transport systems inner membrane component K15552 tauC; taurine transport system permease protein
D Bphy_6081 ABC transporter related K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D Bphy_5229 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_4149 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_5226 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_7236 ABC sulfate ester transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_5227 Substrate-binding region of ABC-type glycine betaine transport system K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_3959 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_0955 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_1964 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_3603 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_1648 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_7235 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_7234 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_3601 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_0957 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_3961 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_1647 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_7233 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_4965 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_3602 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_0956 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_3960 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_4405 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Bphy_6373 ABC molybdate transporter, periplasmic ligand binding protein K02020 modA; molybdate transport system substrate-binding protein
D Bphy_6011 extracellular solute-binding protein family 1 K02020 modA; molybdate transport system substrate-binding protein
D Bphy_4404 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Bphy_4403 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Bphy_1279 extracellular solute-binding protein family 1 K11073 potF; putrescine transport system substrate-binding protein
D Bphy_1276 Ornithine carbamoyltransferase K11074 potI; putrescine transport system permease protein
D Bphy_1277 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Bphy_1278 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Bphy_5065 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D Bphy_5068 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D Bphy_5067 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D Bphy_5066 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D Bphy_3286 choline ABC transporter, periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_3289 choline ABC transporter, periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_3294 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_3447 choline ABC transporter, periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_6868 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_3449 choline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D Bphy_6869 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Bphy_6870 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Bphy_3450 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Bphy_2353 ABC transporter related K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_0494 ABC transporter related K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_7445 ABC transporter related K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_5438 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_0631 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_6367 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_6661 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_4055 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_6366 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_0490 extracellular solute-binding protein family 1 K10227 smoE; polyol transport system substrate-binding protein
D Bphy_0491 binding-protein-dependent transport systems inner membrane component K10228 smoF; polyol transport system permease protein
D Bphy_0492 binding-protein-dependent transport systems inner membrane component K10229 smoG; polyol transport system permease protein
D Bphy_2766 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Bphy_6437 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Bphy_4132 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Bphy_0207 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Bphy_2768 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Bphy_3499 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Bphy_0205 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Bphy_3498 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Bphy_2769 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Bphy_2765 conserved hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D Bphy_0206 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Bphy_3497 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Bphy_2770 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Bphy_1288 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Bphy_4187 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Bphy_1290 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Bphy_1289 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Bphy_1291 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Bphy_0628 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Bphy_5435 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Bphy_6328 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Bphy_5436 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D Bphy_0629 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D Bphy_5437 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D Bphy_0630 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D Bphy_2242 ABC sugar transporter, periplasmic ligand binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_1237 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5595 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_0500 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5185 putative signal peptide protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6343 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5157 putative simple sugar transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5162 putative ABC transporter K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6804 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6817 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6818 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_4302 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_2243 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_1235 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_5596 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_6344 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_0502 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_5160 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Bphy_5159 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Bphy_6815 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_6816 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_5158 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_1236 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_2244 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_0501 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_5597 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_6345 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_4217 Monosaccharide-transporting ATPase K10537 araF; L-arabinose transport system substrate-binding protein
D Bphy_2615 Monosaccharide-transporting ATPase K10537 araF; L-arabinose transport system substrate-binding protein
D Bphy_4219 Monosaccharide-transporting ATPase K10538 araH; L-arabinose transport system permease protein
D Bphy_2613 Monosaccharide-transporting ATPase K10538 araH; L-arabinose transport system permease protein
D Bphy_4218 ABC transporter related K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D Bphy_2614 ABC transporter related K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D Bphy_5518 periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D Bphy_5515 Monosaccharide-transporting ATPase K23509 ytfT; galactofuranose transport system permease protein
D Bphy_5516 Monosaccharide-transporting ATPase K23509 ytfT; galactofuranose transport system permease protein
D Bphy_5517 ABC transporter related K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D Bphy_2341 D-xylose ABC transporter, periplasmic substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D Bphy_2339 Monosaccharide-transporting ATPase K10544 xylH; D-xylose transport system permease protein
D Bphy_2340 D-xylose ABC transporter, ATPase subunit K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D Bphy_3592 Monosaccharide-transporting ATPase K10552 frcB; fructose transport system substrate-binding protein
D Bphy_3593 Monosaccharide-transporting ATPase K10553 frcC; fructose transport system permease protein
D Bphy_3594 ABC transporter related K10554 frcA; fructose transport system ATP-binding protein
D Bphy_3460 rhamnose ABC transporter, periplasmic rhamnose-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D Bphy_3462 Monosaccharide-transporting ATPase K10560 rhaP; rhamnose transport system permease protein
D Bphy_3461 Monosaccharide-transporting ATPase K10561 rhaQ; rhamnose transport system permease protein
D Bphy_3463 ABC transporter related K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_5372 extracellular solute-binding protein family 1 K17321 glpV; glycerol transport system substrate-binding protein
D Bphy_5369 binding-protein-dependent transport systems inner membrane component K17322 glpP; glycerol transport system permease protein
D Bphy_5370 binding-protein-dependent transport systems inner membrane component K17323 glpQ; glycerol transport system permease protein
D Bphy_5367 ABC transporter related K17324 glpS; glycerol transport system ATP-binding protein
D Bphy_5368 ABC transporter related K17325 glpT; glycerol transport system ATP-binding protein
D Bphy_2709 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Bphy_2710 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Bphy_2711 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Bphy_2712 ABC transporter related K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D Bphy_0882 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Bphy_3120 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Bphy_0883 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Bphy_0884 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Bphy_0885 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Bphy_4622 phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D Bphy_4621 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Bphy_4623 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Bphy_0016 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_1780 cationic amino acid ABC transporter, periplasmic binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_3432 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_3780 cationic amino acid ABC transporter, periplasmic binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_4198 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_7494 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_7504 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_2165 polar amino acid ABC transporter, inner membrane subunit K10015 hisM; histidine transport system permease protein
D Bphy_1790 polar amino acid ABC transporter, inner membrane subunit K10015 hisM; histidine transport system permease protein
D Bphy_7502 polar amino acid ABC transporter, inner membrane subunit K10015 hisM; histidine transport system permease protein
D Bphy_2164 polar amino acid ABC transporter, inner membrane subunit K10016 hisQ; histidine transport system permease protein
D Bphy_1791 polar amino acid ABC transporter, inner membrane subunit K10016 hisQ; histidine transport system permease protein
D Bphy_2166 ABC transporter related K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_1789 ABC transporter related K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_7501 ABC transporter related K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_2163 cationic amino acid ABC transporter, periplasmic binding protein K10014 hisJ; histidine transport system substrate-binding protein
D Bphy_1156 extracellular solute-binding protein family 3 K10036 glnH; glutamine transport system substrate-binding protein
D Bphy_1155 polar amino acid ABC transporter, inner membrane subunit K10037 glnP; glutamine transport system permease protein
D Bphy_1154 ABC transporter related K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_2573 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_4578 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_4740 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_2571 polar amino acid ABC transporter, inner membrane subunit K10002 gltK; glutamate/aspartate transport system permease protein
D Bphy_2572 polar amino acid ABC transporter, inner membrane subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D Bphy_2570 ABC transporter related K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5479 ABC transporter related K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5100 extracellular solute-binding protein family 3 K10018 occT; octopine/nopaline transport system substrate-binding protein
D Bphy_5102 polar amino acid ABC transporter, inner membrane subunit K10019 occM; octopine/nopaline transport system permease protein
D Bphy_5101 polar amino acid ABC transporter, inner membrane subunit K10020 occQ; octopine/nopaline transport system permease protein
D Bphy_5103 ABC transporter related K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5881 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Bphy_1531 extracellular solute-binding protein family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D Bphy_5481 extracellular solute-binding protein family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D Bphy_5480 polar amino acid ABC transporter, inner membrane subunit K10009 tcyB; L-cystine transport system permease protein
D Bphy_1530 polar amino acid ABC transporter, inner membrane subunit K10009 tcyB; L-cystine transport system permease protein
D Bphy_1529 ABC transporter related K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_6859 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0112 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_7652 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_5889 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_2237 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3017 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3043 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3047 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0588 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_4932 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_6618 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_4465 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_2015 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0197 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_6166 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3654 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3042 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_3046 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_1607 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_0589 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_4462 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_3041 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1606 inner-membrane translocator K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_0590 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Bphy_3045 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Bphy_3049 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_0591 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_4463 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1605 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1604 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_0592 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_3048 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_3040 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_4464 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_0761 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Bphy_5040 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Bphy_0290 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Bphy_0760 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Bphy_0759 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D Bphy_2251 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D Bphy_6254 putative urea/short-chain binding protein K11959 urtA; urea transport system substrate-binding protein
D Bphy_2252 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D Bphy_2253 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D Bphy_2254 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D Bphy_2255 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D Bphy_4505 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Bphy_4504 Alkaline phosphatase K15581 oppB; oligopeptide transport system permease protein
D Bphy_4503 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Bphy_4502 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D Bphy_4501 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D Bphy_2914 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_0183 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_2915 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_2913 Nickel-transporting ATPase K12369 dppB; dipeptide transport system permease protein
D Bphy_2912 binding-protein-dependent transport systems inner membrane component K12370 dppC; dipeptide transport system permease protein
D Bphy_2911 oligopeptide/dipeptide ABC transporter, ATPase subunit K12371 dppD; dipeptide transport system ATP-binding protein
D Bphy_2910 oligopeptide/dipeptide ABC transporter, ATPase subunit K12372 dppF; dipeptide transport system ATP-binding protein
D Bphy_4225 extracellular solute-binding protein family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D Bphy_4224 binding-protein-dependent transport systems inner membrane component K13890 gsiC; glutathione transport system permease protein
D Bphy_4223 binding-protein-dependent transport systems inner membrane component K13891 gsiD; glutathione transport system permease protein
D Bphy_4226 oligopeptide/dipeptide ABC transporter, ATPase subunit K13892 gsiA; glutathione transport system ATP-binding protein
D Bphy_1383 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Bphy_1382 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D Bphy_1381 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D Bphy_1380 ABC transporter related K13896 yejF; microcin C transport system ATP-binding protein
D Bphy_4041 periplasmic binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D Bphy_4043 transport system permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D Bphy_4044 ABC transporter related K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D Bphy_2314 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Bphy_2313 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Bphy_1635 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein
D Bphy_7719 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein
D Bphy_1634 nodulation ABC transporter NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Bphy_7720 nodulation ABC transporter NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Bphy_1446 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Bphy_1445 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Bphy_2226 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Bphy_2227 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Bphy_0327 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Bphy_2077 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Bphy_3834 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Bphy_3454 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D Bphy_0393 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Bphy_4040 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D Bphy_2775 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:bph02060]
D Bphy_0262 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Bphy_6062 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Bphy_0261 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Bphy_0296 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Bphy_0260 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Bphy_0295 phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D Bphy_0324 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Bphy_3104 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:bph03070]
D Bphy_3453 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Bphy_3836 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Bphy_3834 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Bphy_3070 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Bphy_7395 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Bphy_3073 putative general secretory pathway protein C K02452 gspC; general secretion pathway protein C
D Bphy_3072 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D Bphy_3074 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D Bphy_3075 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D Bphy_3076 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D Bphy_3077 putative general secretory pathway protein J K02459 gspJ; general secretion pathway protein J
D Bphy_3078 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D Bphy_3079 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D Bphy_3080 General secretion pathway M protein K02462 gspM; general secretion pathway protein M
D Bphy_3071 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Bphy_2527 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Bphy_2528 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Bphy_2854 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Bphy_2010 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Bphy_2819 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Bphy_2526 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Bphy_3098 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Bphy_2664 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Bphy_0308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Bphy_0269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Bphy_2643 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Bphy_2748 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Bphy_2747 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Bphy_2746 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Bphy_7537 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1
D Bphy_7535 type IV secretory pathway VirB3 family protein K03198 virB3; type IV secretion system protein VirB3
D Bphy_7533 type IV secretion system family protein K03200 virB5; type IV secretion system protein VirB5
D Bphy_7529 Conjugal transfer protein TrbG/VirB9/CagX K03204 virB9; type IV secretion system protein VirB9
D Bphy_7531 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D Bphy_7530 VirB8 family protein K03203 virB8; type IV secretion system protein VirB8
D Bphy_7528 conjugation TrbI family protein K03195 virB10; type IV secretion system protein VirB10
D Bphy_7534 CagE TrbE VirB component of type IV transporter system K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D Bphy_7526 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D Bphy_7522 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Bphy_1932 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_0023 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_6124 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_5985 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_5744 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_3640 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_7022 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_5197 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_7365 type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D Bphy_5980 protein of unknown function DUF796 K11903 hcp; type VI secretion system secreted protein Hcp
D Bphy_6112 type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D Bphy_3341 protein of unknown function DUF796 K11903 hcp; type VI secretion system secreted protein Hcp
D Bphy_6111 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D Bphy_5996 conserved hypothetical IcmF-like protein K11891 impL; type VI secretion system protein ImpL
D Bphy_6108 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D Bphy_5995 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D Bphy_6109 type VI secretion system OmpA/MotB family protein K11892 impK; type VI secretion system protein ImpK
D Bphy_6107 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D Bphy_7017 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D Bphy_6115 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D Bphy_5984 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bph02020]
D Bphy_0888 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Bphy_0887 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Bphy_0882 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Bphy_3120 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Bphy_1002 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2403 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2159 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2784 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_3495 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_5042 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_1003 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_2160 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_2783 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_2778 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_3494 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_3927 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_2404 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_0471 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_0837 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_5776 PDZ/DHR/GLGF domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_3928 integral membrane sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Bphy_3929 two component transcriptional regulator, winged helix family K07664 baeR; two-component system, OmpR family, response regulator BaeR
D Bphy_1771 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Bphy_3489 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Bphy_1772 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D Bphy_3488 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D Bphy_1773 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D Bphy_3487 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D Bphy_6518 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Bphy_3963 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Bphy_3962 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Bphy_6519 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Bphy_6232 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_6336 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_1184 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_1183 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_6233 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_6335 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_4639 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_2979 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_7083 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_4638 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_2978 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_7082 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_2989 flagellin domain protein K02406 fliC; flagellin
D Bphy_2960 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Bphy_4205 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Bphy_2977 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D Bphy_2054 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Bphy_2053 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Bphy_2057 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Bphy_2056 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Bphy_2055 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Bphy_3957 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D Bphy_3958 two component transcriptional regulator, winged helix family K07774 tctD; two-component system, OmpR family, response regulator TctD
D Bphy_0285 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Bphy_6047 Levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D Bphy_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Bphy_4019 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Bphy_4003 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Bphy_4946 HpcH/HpaI aldolase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Bphy_4357 HpcH/HpaI aldolase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Bphy_6486 triphosphoribosyl-dephospho-CoA protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Bphy_5944 triphosphoribosyl-dephospho-CoA protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Bphy_5667 Citrate carrier protein K11616 maeN; malate:Na+ symporter
D Bphy_6191 multi-sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Bphy_5967 integral membrane sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Bphy_6192 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_5911 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_5955 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_6469 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_7761 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_6184 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_6185 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_6187 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_6186 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D Bphy_1145 multi-sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Bphy_0098 histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Bphy_4270 histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Bphy_4333 response regulator receiver protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Bphy_0354 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_3459 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_2872 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_0355 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_0356 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_1508 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Bphy_4331 two component transcriptional regulator, LuxR family K07690 evgA; two-component system, NarL family, response regulator EvgA
D Bphy_4334 two component transcriptional regulator, LuxR family K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D Bphy_4335 two component transcriptional regulator, LuxR family K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D Bphy_5317 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Bphy_5316 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Bphy_5320 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Bphy_4344 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Bphy_5321 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Bphy_4345 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Bphy_5323 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Bphy_5324 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Bphy_4346 FHA domain containing protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Bphy_4347 type II secretion system protein K12510 tadB; tight adherence protein B
D Bphy_5325 type II secretion system protein K12510 tadB; tight adherence protein B
D Bphy_5326 type II secretion system protein K12511 tadC; tight adherence protein C
D Bphy_4348 type II secretion system protein K12511 tadC; tight adherence protein C
D Bphy_1340 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Bphy_2168 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Bphy_1480 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Bphy_1479 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Bphy_1481 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_5918 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_3572 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_6981 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_7784 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_0041 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Bphy_0042 two component transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Bphy_7728 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein
D Bphy_0847 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_5668 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Bphy_0226 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Bphy_0227 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D Bphy_5669 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D Bphy_2596 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Bphy_6387 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Bphy_0225 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Bphy_6010 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Bphy_0326 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Bphy_5304 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Bphy_0446 putative type IV fimbrial pilin protein K02650 pilA; type IV pilus assembly protein PilA
D Bphy_7265 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Bphy_7264 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Bphy_7263 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Bphy_4209 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Bphy_2971 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Bphy_5175 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Bphy_6399 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Bphy_1275 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5591 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_3227 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_4315 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_1586 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_0289 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5380 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5569 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5592 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_3823 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_4943 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5545 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_6319 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_6805 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_0137 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_2287 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_0345 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_2972 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_1232 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_4305 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_6091 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_6386 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_4269 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D Bphy_2973 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Bphy_2974 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_3590 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_2968 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_3587 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_2975 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_4208 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_6398 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_2969 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_7044 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_5616 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Bphy_5393 MCP methyltransferase, CheR-type with Tpr repeats K13486 wspC; chemotaxis protein methyltransferase WspC
D Bphy_5395 methyl-accepting chemotaxis sensory transducer K13487 wspA; methyl-accepting chemotaxis protein WspA
D Bphy_5394 CheW protein K13488 wspB; chemotaxis-related protein WspB
D Bphy_5392 CheW protein K13489 wspD; chemotaxis-related protein WspD
D Bphy_5391 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D Bphy_5390 response regulator receiver modulated CheB methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D Bphy_5389 response regulator receiver modulated diguanylate cyclase K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D Bphy_3992 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Bphy_0644 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Bphy_2570 ABC transporter related K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5479 ABC transporter related K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_2571 polar amino acid ABC transporter, inner membrane subunit K10002 gltK; glutamate/aspartate transport system permease protein
D Bphy_2572 polar amino acid ABC transporter, inner membrane subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D Bphy_2573 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_4578 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_4740 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_5278 Enoyl-CoA hydratase/isomerase K13816 rpfF; DSF synthase
D Bphy_5773 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Bphy_0067 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Bphy_0068 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA
D Bphy_2743 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Bphy_2742 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Bphy_2741 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Bphy_0126 cytochrome c class I K08738 CYC; cytochrome c
D Bphy_2222 cytochrome c class I K08738 CYC; cytochrome c
D Bphy_1140 cytochrome c family protein K08738 CYC; cytochrome c
D Bphy_5120 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Bphy_0299 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Bphy_5697 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Bphy_4775 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Bphy_0298 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Bphy_5696 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Bphy_5119 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Bphy_0297 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D Bphy_3453 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Bphy_1060 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Bphy_3278 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Bphy_2473 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Bphy_1690 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Bphy_1059 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Bphy_3277 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Bphy_1460 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Bphy_1689 exopolysaccharide transport protein family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_3276 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_2472 exopolysaccharide transport protein family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_1061 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_3733 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_6733 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_2378 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Bphy_0134 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D Bphy_4336 Hpt protein K20976 hptB; histidine phosphotransfer protein HptB
D Bphy_2946 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Bphy_4598 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:bph04148]
D Bphy_6445 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Bphy_2743 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bph02024]
D Bphy_1711 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Bphy_1415 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Bphy_4437 autoinducer synthesis protein K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184]
D Bphy_4439 transcriptional regulator, LuxR family K18304 lasR; LuxR family transcriptional regulator, quorum-sensing system regulator LasR
D Bphy_2698 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Bphy_2699 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Bphy_2315 rhamnosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D Bphy_4110 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Bphy_2510 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Bphy_6232 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_6336 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_1184 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_1183 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_6233 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_6335 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_4639 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_2979 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_7083 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_4638 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_2978 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_7082 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_2053 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Bphy_6038 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_4322 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_6575 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_1501 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_6274 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_5429 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_7064 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_6624 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_0221 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_7049 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_4443 extracellular solute-binding protein, family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_2382 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_5902 ABC spermidine/putrescine transporter, periplasmic ligand binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_7798 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_4324 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_5900 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6036 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6272 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6578 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6628 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_7052 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_2380 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_0223 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_1503 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_1502 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_7801 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_4446 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_7062 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6579 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_7800 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_0222 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_7051 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_6273 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_4323 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_5901 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_6629 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_4445 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_6037 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_2381 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_6582 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_2383 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_6630 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_6039 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_7063 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_4321 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_1504 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_6271 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_0224 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_5903 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_7050 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_4444 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_7799 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_6859 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0112 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_7652 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_5889 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_2237 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3017 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3043 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3047 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0588 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_4932 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_6618 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_4465 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_2015 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0197 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_6166 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3654 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3042 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_3046 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_1607 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_0589 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_4462 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_3041 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1606 inner-membrane translocator K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_0590 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Bphy_3045 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Bphy_3049 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_0591 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_4463 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1605 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1604 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_0592 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_3048 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_3040 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_4464 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_7394 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2]
D Bphy_5278 Enoyl-CoA hydratase/isomerase K13816 rpfF; DSF synthase
D Bphy_5279 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
D Bphy_2685 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_1704 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_5806 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4871 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_0524 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4840 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4848 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_7005 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_3354 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Bphy_0488 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Bphy_1769 transcriptional regulator, IclR family K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D Bphy_3240 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Bphy_0621 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Bphy_0480 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_0649 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3490 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_5505 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3507 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_4505 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Bphy_4504 Alkaline phosphatase K15581 oppB; oligopeptide transport system permease protein
D Bphy_4503 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Bphy_4502 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D Bphy_4501 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D Bphy_0558 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_6651 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_4004 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_6591 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_7644 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_0557 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_6650 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_7645 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_4005 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_6590 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_0556 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_6649 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_7646 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_4006 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_6589 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_7647 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_4007 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_6588 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_0555 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_6653 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_4008 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Bphy_7648 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Bphy_6652 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Bphy_3098 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Bphy_2854 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Bphy_2010 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Bphy_2819 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Bphy_2526 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Bphy_2664 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Bphy_0308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Bphy_0269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Bphy_2643 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Bphy_3755 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7067 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_5529 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_6939 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_1546 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7081 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bph02030]
D Bphy_1275 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5591 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_3227 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_4315 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_1586 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_0289 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5380 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5569 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5592 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_3823 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_4943 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5545 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_6319 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_6805 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_0137 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_2287 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_0345 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_2972 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_1232 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_4305 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_6091 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_6386 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_4269 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D Bphy_2242 ABC sugar transporter, periplasmic ligand binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_1237 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5595 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_0500 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5185 putative signal peptide protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6343 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5157 putative simple sugar transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5162 putative ABC transporter K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6804 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6817 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6818 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_4302 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_2914 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_0183 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_2915 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_2974 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_3590 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_2973 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Bphy_2968 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_3587 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_2975 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_4142 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Bphy_2967 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D Bphy_4208 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_6398 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_2969 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_7044 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_5175 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Bphy_6399 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Bphy_5616 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Bphy_2970 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Bphy_4209 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Bphy_2971 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Bphy_2932 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Bphy_2938 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Bphy_2939 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Bphy_4205 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Bphy_2977 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D Bphy_2976 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Bphy_4204 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bph02040]
D Bphy_2930 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Bphy_2931 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Bphy_2932 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Bphy_2933 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Bphy_2934 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Bphy_2935 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Bphy_2936 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Bphy_2937 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Bphy_2938 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Bphy_2939 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Bphy_2940 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Bphy_2941 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Bphy_2942 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Bphy_2943 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Bphy_2963 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Bphy_2964 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Bphy_2947 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Bphy_2948 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Bphy_2949 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Bphy_2950 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Bphy_2951 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D Bphy_2952 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Bphy_2953 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Bphy_2779 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Bphy_2954 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Bphy_2955 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Bphy_2956 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D Bphy_2958 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Bphy_2959 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Bphy_2989 flagellin domain protein K02406 fliC; flagellin
D Bphy_2990 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Bphy_2929 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Bphy_2928 putative flagellar protein FliT K02423 fliT; flagellar protein FliT
D Bphy_2991 conserved hypothetical protein K02423 fliT; flagellar protein FliT
D Bphy_4205 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Bphy_2977 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D Bphy_2976 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Bphy_4204 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Bphy_2946 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Bphy_4598 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Bphy_2945 FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D Bphy_1531 extracellular solute-binding protein family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D Bphy_5481 extracellular solute-binding protein family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D Bphy_3690 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Bphy_3941 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Bphy_4639 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_2979 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_7083 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_4638 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_2978 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_7082 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_0326 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Bphy_5304 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Bphy_2960 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Bphy_1439 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:bph04980]
D Bphy_2512 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Bphy_4569 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Bphy_0190 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Bphy_0191 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bph01501]
D Bphy_3288 porin Gram-negative type K08720 ompU; outer membrane protein OmpU
D Bphy_0059 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Bphy_0846 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Bphy_1165 transcriptional regulator, LysR family K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D Bphy_4505 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Bphy_4504 Alkaline phosphatase K15581 oppB; oligopeptide transport system permease protein
D Bphy_4503 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Bphy_4502 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D Bphy_4501 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D Bphy_2229 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Bphy_1164 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Bphy_0647 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_0478 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_5503 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7712 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_2410 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_3492 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7211 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7711 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Bphy_5504 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_0648 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_0479 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_3491 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_2411 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Bphy_0480 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_0649 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3490 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_5505 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3507 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3453 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Bphy_1268 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_3899 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_2799 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_0049 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Bphy_3824 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Bphy_2679 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bph01502]
D Bphy_4003 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Bphy_2671 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Bphy_7633 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Bphy_1359 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Bphy_2677 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Bphy_2676 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Bphy_2673 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bph01503]
D Bphy_0925 glycosyl transferase family 2 K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D Bphy_0922 polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D Bphy_0519 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Bphy_0471 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_0837 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_5776 PDZ/DHR/GLGF domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_0186 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Bphy_1392 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Bphy_0647 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_0478 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_5503 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7712 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_2410 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_3492 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7211 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7711 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Bphy_5504 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_0648 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_0479 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_3491 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_2411 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Bphy_3453 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Bphy_1326 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Bphy_4019 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bph01000]
C 01001 Protein kinases [BR:bph01001]
D Bphy_5532 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Bphy_5635 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Bphy_1068 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Bphy_0131 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Bphy_1689 exopolysaccharide transport protein family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_3276 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_2472 exopolysaccharide transport protein family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_1061 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_3733 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_6733 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_0888 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Bphy_1002 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2403 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2159 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2784 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_3495 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_5042 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_3928 integral membrane sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Bphy_6518 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Bphy_3963 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Bphy_6232 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_6336 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_1184 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_2054 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Bphy_3957 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D Bphy_0470 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Bphy_3964 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Bphy_3111 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Bphy_4064 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Bphy_6191 multi-sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Bphy_5967 integral membrane sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Bphy_1145 multi-sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Bphy_0098 histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Bphy_4270 histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Bphy_4333 response regulator receiver protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Bphy_6470 integral membrane sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D Bphy_7760 integral membrane sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D Bphy_1480 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Bphy_0041 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Bphy_5668 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Bphy_0226 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Bphy_2974 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_3590 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_5391 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D Bphy_0644 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Bphy_0067 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Bphy_0134 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D Bphy_4530 response regulator receiver sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bph01009]
D Bphy_2918 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Bphy_2113 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Bphy_0978 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:bph01002]
D Bphy_0573 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Bphy_2657 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Bphy_5318 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Bphy_7262 hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Bphy_3062 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Bphy_1312 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Bphy_3571 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Bphy_7781 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Bphy_0717 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Bphy_6978 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Bphy_3454 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D Bphy_4381 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Bphy_7471 glutamine amidotransferase class-II K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Bphy_2788 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Bphy_2890 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Bphy_0294 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Bphy_1758 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D Bphy_5298 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D Bphy_5617 Abortive infection protein K07052 K07052; CAAX protease family protein
D Bphy_3796 Abortive infection protein K07052 K07052; CAAX protease family protein
D Bphy_0686 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Bphy_1476 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D Bphy_4003 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Bphy_2225 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Bphy_3302 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Bphy_1351 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Bphy_0996 peptidase dimerisation domain protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Bphy_3769 amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D Bphy_1825 amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D Bphy_0653 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Bphy_1339 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Bphy_4908 conserved hypothetical protein K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Bphy_7500 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Bphy_7796 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Bphy_2717 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Bphy_2549 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Bphy_5769 AAA ATPase central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Bphy_0879 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Bphy_1112 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Bphy_6007 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Bphy_0777 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D Bphy_0038 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Bphy_2547 peptidase M48 Ste24p K07387 K07387; metalloprotease [EC:3.4.24.-]
D Bphy_0450 peptidase M48 Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D Bphy_1331 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Bphy_4221 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D Bphy_0948 protein of unknown function DUF980 K09933 mtfA; MtfA peptidase
D Bphy_4222 peptidase S58 DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D Bphy_0471 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_0837 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_5776 PDZ/DHR/GLGF domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_2745 2-alkenal reductase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D Bphy_0212 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Bphy_1466 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D Bphy_0468 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Bphy_0544 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Bphy_1011 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Bphy_0104 AAA ATPase central domain protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Bphy_1013 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Bphy_1630 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Bphy_0840 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Bphy_1665 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Bphy_3236 alpha/beta hydrolase fold protein K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D Bphy_0758 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D Bphy_0264 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Bphy_4181 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Bphy_0822 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D Bphy_5054 Peptidase S53 propeptide K08677 kscP; kumamolisin [EC:3.4.21.123]
D Bphy_6936 Peptidase S53 propeptide K08677 kscP; kumamolisin [EC:3.4.21.123]
D Bphy_4176 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Bphy_1304 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Bphy_3395 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Bphy_0070 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Bphy_4227 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Bphy_4543 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_1616 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_3857 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_6648 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Bphy_4589 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Bphy_0781 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D Bphy_2509 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D Bphy_0942 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
D Bphy_1412 band 7 protein K04087 hflC; modulator of FtsH protease HflC
D Bphy_1413 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:bph01003]
D Bphy_2295 glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Bphy_2992 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2993 Tetratricopeptide TPR_2 repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2996 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2997 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_7079 putative (ceramide) glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Bphy_1180 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Bphy_1798 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Bphy_5336 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Bphy_3256 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Bphy_7721 glycosyl transferase family 2 K14666 nodC; N-acetylglucosaminyltransferase [EC:2.4.1.-]
D Bphy_2621 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Bphy_0941 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Bphy_1268 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_3899 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_2799 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_1833 glycosyl transferase group 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D Bphy_5285 glycosyl transferase group 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D Bphy_6047 Levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D Bphy_2145 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Bphy_0859 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Bphy_1048 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bph01005]
D Bphy_1326 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Bphy_1325 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Bphy_2666 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Bphy_1328 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Bphy_1394 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Bphy_0538 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Bphy_0077 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Bphy_2264 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Bphy_0302 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Bphy_1440 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Bphy_0536 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Bphy_0330 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Bphy_0331 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Bphy_0751 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Bphy_0201 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Bphy_2266 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Bphy_0661 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Bphy_0454 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Bphy_2075 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D Bphy_3924 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D Bphy_0124 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Bphy_0404 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Bphy_5249 hydrolase, HAD-superfamily, subfamily IIIA K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Bphy_0752 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Bphy_2315 rhamnosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D Bphy_1685 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bph01011]
D Bphy_2761 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Bphy_0528 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Bphy_2672 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Bphy_2675 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Bphy_2678 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Bphy_2671 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Bphy_7633 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Bphy_1359 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Bphy_1943 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Bphy_4176 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Bphy_1304 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Bphy_2676 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Bphy_2673 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Bphy_0902 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Bphy_0605 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Bphy_7181 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Bphy_0532 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Bphy_1268 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_3899 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_2799 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Bphy_0941 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Bphy_0049 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Bphy_3824 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Bphy_2679 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Bphy_0212 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Bphy_0468 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Bphy_1466 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D Bphy_2621 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Bphy_4003 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Bphy_2900 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Bphy_2694 MltA domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D Bphy_0755 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Bphy_0871 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Bphy_1042 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Bphy_0121 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Bphy_4319 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Bphy_3653 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Bphy_0519 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Bphy_1694 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Bphy_2640 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bph01004]
D Bphy_0829 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Bphy_0828 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Bphy_0704 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Bphy_0700 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Bphy_0703 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Bphy_0832 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Bphy_0342 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_2062 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_1701 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_2175 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_0702 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_4948 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5822 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_0830 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5382 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_5165 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_6999 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Bphy_1327 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Bphy_1384 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Bphy_3687 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Bphy_7089 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Bphy_1017 Lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Bphy_0392 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D Bphy_0579 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D Bphy_1938 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_5127 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_4939 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_7028 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1850 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Bphy_1588 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Bphy_7003 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Bphy_3178 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Bphy_2685 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_1704 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_5806 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4871 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_0524 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4840 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4848 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_7005 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_3530 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Bphy_3025 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Bphy_4921 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Bphy_0827 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Bphy_0526 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Bphy_2322 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Bphy_0403 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Bphy_7109 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bph01008]
D Bphy_4046 MbtH domain protein K05375 mbtH; MbtH protein
D Bphy_5638 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_5991 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Bphy_5339 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:bph01006]
D Bphy_3949 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Bphy_2653 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Bphy_1334 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Bphy_5450 Squalene/phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D Bphy_1006 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Bphy_2486 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Bphy_2519 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Bphy_0286 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bph01007]
D Bphy_1377 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Bphy_0907 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Bphy_2081 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Bphy_2560 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Bphy_1429 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Bphy_6692 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Bphy_1390 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Bphy_0188 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Bphy_2191 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Bphy_0574 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Bphy_1591 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Bphy_2588 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Bphy_1450 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Bphy_0381 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Bphy_1419 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Bphy_0406 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Bphy_0405 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Bphy_0642 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Bphy_2646 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Bphy_1558 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Bphy_1613 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Bphy_1554 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Bphy_1553 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Bphy_3133 conserved hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D Bphy_0930 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Bphy_5444 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_1959 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Bphy_1981 aminotransferase class I and II K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D Bphy_0014 aminotransferase class I and II K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D Bphy_1348 aminotransferase class I and II K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Bphy_0742 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_0312 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_2758 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Bphy_4159 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Bphy_0172 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Bphy_4468 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Bphy_0594 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Bphy_1787 succinylornithine transaminase family K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D Bphy_4851 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_4618 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Bphy_7266 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D Bphy_3573 aminotransferase class-III K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D Bphy_0173 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Bphy_6167 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Bphy_0622 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Bphy_0456 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Bphy_2495 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Bphy_7778 aminotransferase class V K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D Bphy_3820 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D Bphy_5064 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D Bphy_4253 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_5929 Serine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_2424 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Bphy_0740 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bph00194]
D Bphy_1128 alternate F1F0 ATPase, F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Bphy_3026 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Bphy_1129 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Bphy_3027 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Bphy_1121 H+transporting two-sector ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Bphy_3028 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Bphy_1122 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Bphy_3029 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Bphy_3030 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Bphy_1123 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Bphy_3031 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Bphy_1124 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Bphy_3032 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Bphy_1125 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Bphy_3033 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Bphy_3034 ATP synthase I chain K02116 atpI; ATP synthase protein I
D Bphy_1127 F0F1-ATPase subunit K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bph03000]
D Bphy_2140 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_1917 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_3399 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_0011 transcriptional regulator, AraC family K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D Bphy_4195 transcriptional regulator, AraC family K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D Bphy_4013 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Bphy_6092 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Bphy_6295 transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D Bphy_5355 transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D Bphy_7171 transcriptional regulator, AraC family K21747 alkR; AraC family transcriptional regulator, alkane utilization regulator
D Bphy_4077 transcription activator effector binding K13653 K13653; AraC family transcriptional regulator
D Bphy_4258 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Bphy_3162 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Bphy_5999 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Bphy_5716 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Bphy_5694 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Bphy_6896 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Bphy_3088 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Bphy_4737 transcriptional regulator, AraC family K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D Bphy_3287 transcriptional regulator, AraC family K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D Bphy_1788 transcriptional regulator, AraC family K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D Bphy_3304 transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D Bphy_3448 transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D Bphy_6285 transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D Bphy_0214 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_2385 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_3246 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_5893 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_4417 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_3108 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_4974 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_4988 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_6862 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Bphy_3888 transcriptional regulator, LysR family K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D Bphy_5471 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D Bphy_5521 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D Bphy_2522 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Bphy_7420 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Bphy_3168 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Bphy_1829 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Bphy_2236 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D Bphy_1625 transcriptional regulator, LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D Bphy_6018 transcriptional regulator, LysR family K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D Bphy_1826 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D Bphy_4197 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D Bphy_3819 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D Bphy_7723 transcriptional regulator, LysR family K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator
D Bphy_6570 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D Bphy_5765 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D Bphy_5656 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D Bphy_6389 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D Bphy_6554 transcriptional regulator, LysR family K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D Bphy_1165 transcriptional regulator, LysR family K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D Bphy_4632 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Bphy_5846 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Bphy_3326 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Bphy_3913 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Bphy_4950 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Bphy_3210 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Bphy_3202 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Bphy_6666 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Bphy_6676 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Bphy_5636 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D Bphy_2575 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D Bphy_6474 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Bphy_1827 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Bphy_4697 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Bphy_5931 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Bphy_5950 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Bphy_4030 transcriptional regulator, LysR family K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D Bphy_5353 transcriptional regulator, LysR family K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D Bphy_4660 transcriptional regulator, DeoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D Bphy_0423 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D Bphy_3160 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D Bphy_5063 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D Bphy_0219 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D Bphy_5439 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_1234 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_6372 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_6779 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_2343 transcriptional regulator, AraC family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_3911 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_6046 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_7423 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_4590 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_7452 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_5674 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_7709 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Bphy_1250 transcriptional regulator, LacI family K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D Bphy_2245 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D Bphy_5388 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D Bphy_5547 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D Bphy_3695 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D Bphy_3772 transcriptional regulator, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D Bphy_1813 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D Bphy_5106 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D Bphy_5105 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D Bphy_0552 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D Bphy_0292 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D Bphy_5190 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Bphy_4360 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Bphy_5379 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Bphy_2597 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Bphy_6346 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Bphy_4422 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Bphy_5153 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Bphy_4435 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Bphy_6745 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Bphy_6525 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Bphy_5644 GntR domain protein K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D Bphy_7453 GntR domain protein K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D Bphy_5345 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_3552 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_4112 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_4510 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_6226 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_4619 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_4320 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_5851 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_6987 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_4852 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Bphy_6983 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D Bphy_6553 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D Bphy_3308 transcriptional regulator, TetR family K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D Bphy_0477 transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D Bphy_3493 transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D Bphy_0062 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D Bphy_1537 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Bphy_4330 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Bphy_5419 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D Bphy_4679 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Bphy_5603 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Bphy_6078 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Bphy_3233 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Bphy_6780 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Bphy_2347 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Bphy_1272 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D Bphy_4824 transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D Bphy_3363 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D Bphy_2865 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_0766 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_3954 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_0159 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_1849 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_0118 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_0509 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_3054 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_5049 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_7497 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_3860 transcriptional regulator, AsnC family K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D Bphy_1752 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D Bphy_4439 transcriptional regulator, LuxR family K18304 lasR; LuxR family transcriptional regulator, quorum-sensing system regulator LasR
D Bphy_7173 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D Bphy_5463 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D Bphy_4410 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Bphy_5662 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Bphy_1967 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Bphy_2355 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D Bphy_2593 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Bphy_3966 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Bphy_3354 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Bphy_0488 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Bphy_6211 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Bphy_6219 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Bphy_1079 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D Bphy_3768 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D Bphy_7060 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D Bphy_2370 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D Bphy_4534 transcriptional regulator, IclR family K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D Bphy_5758 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Bphy_1769 transcriptional regulator, IclR family K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D Bphy_1138 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Bphy_4433 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Bphy_5811 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Bphy_1459 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Bphy_0937 transcriptional regulator, TrmB K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Bphy_0723 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Bphy_1541 transcriptional regulator, XRE family with shikimate kinase activity K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D Bphy_4158 transcriptional regulator, XRE family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D Bphy_2581 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D Bphy_4054 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D Bphy_0204 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Bphy_2552 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Bphy_6705 proprionate catabolism activator, Fis family K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D Bphy_5634 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Bphy_5530 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Bphy_3427 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Bphy_6153 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Bphy_7189 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Bphy_6490 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Bphy_5954 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Bphy_3762 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Bphy_4025 transcriptional regulator, NifA subfamily, Fis Family K12266 norR; anaerobic nitric oxide reductase transcription regulator
D Bphy_7728 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein
D Bphy_4402 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Bphy_5363 TOBE domain protein K02019 modE; molybdate transport system regulatory protein
D Bphy_3430 YheO domain protein K21829 dauR; D-arginine utilization repressor
D Bphy_3018 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Bphy_7187 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Bphy_1024 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Bphy_4152 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_3036 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_7548 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_7203 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_2503 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Bphy_2325 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Bphy_1935 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D Bphy_3413 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D Bphy_0241 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D Bphy_3238 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D Bphy_5850 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D Bphy_2327 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Bphy_0071 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Bphy_2448 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D Bphy_2682 protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:bph03021]
D Bphy_5309 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D Bphy_2813 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Bphy_2848 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Bphy_2847 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Bphy_0670 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Bphy_3690 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Bphy_3941 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Bphy_0962 RNA polymerase, sigma 38 subunit, RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D Bphy_0018 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Bphy_0834 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Bphy_1709 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Bphy_2023 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Bphy_4090 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Bphy_0909 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Bphy_6256 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Bphy_0301 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D Bphy_0326 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Bphy_5304 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Bphy_2960 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Bphy_0237 SNF2-related protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D Bphy_1730 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Bphy_0617 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Bphy_2853 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Bphy_2740 Glutathione S-transferase domain K03599 sspA; stringent starvation protein A
D Bphy_2739 Stringent starvation protein B K03600 sspB; stringent starvation protein B
D Bphy_0131 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Bphy_0130 anti-sigma-factor antagonist K17762 rsbS; rsbT antagonist protein RsbS
D Bphy_0129 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D Bphy_0835 anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D Bphy_0836 sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D Bphy_0071 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Bphy_0875 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Bphy_0673 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D Bphy_0949 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bph03019]
D Bphy_0818 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Bphy_2071 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Bphy_0841 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Bphy_1697 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Bphy_2603 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D Bphy_5897 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D Bphy_0778 Exonuclease RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Bphy_0426 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Bphy_2082 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Bphy_5193 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Bphy_4797 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Bphy_2846 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Bphy_1439 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Bphy_2013 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Bphy_0949 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Bphy_2497 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Bphy_2333 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_1113 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_1711 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Bphy_1415 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Bphy_0890 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Bphy_3502 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_3855 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_5508 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_1162 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_6004 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Bphy_2491 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Bphy_2647 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Bphy_1374 regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D Bphy_0322 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D Bphy_1488 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:bph03011]
D Bphy_0746 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Bphy_1338 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Bphy_2834 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Bphy_2814 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Bphy_2822 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Bphy_0911 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Bphy_2844 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Bphy_2825 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Bphy_2563 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Bphy_2841 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Bphy_2815 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Bphy_2845 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Bphy_2816 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Bphy_2826 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Bphy_2014 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Bphy_0769 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Bphy_2831 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Bphy_0913 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Bphy_2836 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Bphy_0531 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Bphy_3944 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Bphy_2987 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Bphy_2851 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Bphy_2837 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Bphy_2840 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Bphy_2839 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Bphy_2827 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Bphy_2824 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Bphy_0914 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Bphy_2850 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Bphy_2852 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Bphy_2849 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Bphy_2564 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Bphy_2829 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Bphy_2820 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Bphy_2833 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Bphy_2812 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Bphy_2823 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Bphy_0772 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Bphy_1555 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Bphy_2652 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Bphy_2835 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Bphy_2838 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Bphy_2828 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Bphy_2651 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Bphy_0584 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Bphy_2832 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Bphy_2821 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Bphy_0947 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Bphy_0826 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Bphy_0583 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Bphy_3101 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Bphy_1556 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Bphy_2817 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Bphy_0314 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Bphy_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bph03009]
D Bphy_0841 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Bphy_0778 Exonuclease RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Bphy_0842 GTP-binding protein Era K03595 era; GTPase
D Bphy_2650 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Bphy_0071 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Bphy_1730 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Bphy_0617 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Bphy_2853 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Bphy_0599 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Bphy_0399 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Bphy_0577 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Bphy_0039 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Bphy_0309 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Bphy_2601 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Bphy_3038 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Bphy_2681 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Bphy_0122 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Bphy_0823 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Bphy_1696 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Bphy_0878 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Bphy_2069 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Bphy_0073 PUA domain containing protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Bphy_1963 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D Bphy_2537 putative RNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D Bphy_1422 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Bphy_0965 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Bphy_1732 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Bphy_0819 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Bphy_0967 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Bphy_0564 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D Bphy_1341 RNA-binding S4 domain protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D Bphy_1364 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Bphy_0770 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Bphy_0973 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Bphy_2631 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Bphy_1352 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D Bphy_1402 Cupin 4 family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D Bphy_0818 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Bphy_2071 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Bphy_2326 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Bphy_0013 DEAD/DEAH box helicase domain protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D Bphy_0776 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Bphy_1416 small GTP-binding protein K03977 engA; GTPase
D Bphy_1414 GTP-binding proten HflX K03665 hflX; GTPase
D Bphy_0465 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Bphy_5215 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Bphy_0671 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Bphy_1728 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Bphy_1731 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Bphy_0798 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D Bphy_2068 iojap-like protein K09710 ybeB; ribosome-associated protein
D Bphy_0410 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Bphy_0877 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein
D Bphy_0780 protein of unknown function DUF615 K09889 yjgA; ribosome-associated protein
D Bphy_0325 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Bphy_2708 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Bphy_0825 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bph03016]
D Bphy_2603 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D Bphy_5897 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D Bphy_2897 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Bphy_1377 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Bphy_2646 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Bphy_0574 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Bphy_2588 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Bphy_2191 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Bphy_0907 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Bphy_0188 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Bphy_1450 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Bphy_0381 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Bphy_1613 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Bphy_1558 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Bphy_0642 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Bphy_6692 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Bphy_1390 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Bphy_1591 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Bphy_1419 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Bphy_1554 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Bphy_1553 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Bphy_2560 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Bphy_1429 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Bphy_2559 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Bphy_2035 Threonyl/alanyl tRNA synthetase SAD K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D Bphy_3878 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Bphy_2749 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Bphy_0606 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Bphy_4372 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Bphy_1727 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Bphy_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Bphy_0465 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Bphy_2486 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Bphy_3096 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Bphy_3039 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Bphy_4627 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Bphy_3100 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Bphy_R0009 Bacterial RNase P class A as predicted by Rfam (RF00010); RNA component of RNaseP K01978 rnpB; M1 RNA
D Bphy_0667 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Bphy_2623 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D Bphy_2786 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Bphy_2713 ABC transporter related K06020 ettA; energy-dependent translational throttle protein EttA
D Bphy_0406 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Bphy_0405 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Bphy_3133 conserved hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D Bphy_2081 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Bphy_5840 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D Bphy_1305 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Bphy_1641 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Bphy_2551 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Bphy_0412 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Bphy_1396 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D Bphy_0771 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Bphy_0272 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Bphy_1323 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Bphy_2545 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Bphy_2892 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Bphy_1593 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Bphy_1456 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D Bphy_7775 HesB/YadR/YfhF-family protein K13628 iscA; iron-sulfur cluster assembly protein
D Bphy_7744 HesB/YadR/YfhF-family protein K13628 iscA; iron-sulfur cluster assembly protein
D Bphy_1041 putative glycine cleavage T protein (aminomethyltransferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D Bphy_3066 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D Bphy_2524 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Bphy_0043 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Bphy_0045 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Bphy_7690 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Bphy_0044 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Bphy_0368 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Bphy_0521 iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Bphy_3699 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D Bphy_2525 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Bphy_1387 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Bphy_1365 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Bphy_3946 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Bphy_0520 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Bphy_0515 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Bphy_1697 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Bphy_2013 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bph03012]
D Bphy_1729 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Bphy_1557 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Bphy_1355 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Bphy_1337 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Bphy_2842 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Bphy_2855 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Bphy_0561 translation elongation factor G K02355 fusA; elongation factor G
D Bphy_6425 small GTP-binding protein K02355 fusA; elongation factor G
D Bphy_2843 translation elongation factor G K02355 fusA; elongation factor G
D Bphy_4523 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D Bphy_2721 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Bphy_1335 ribosome recycling factor K02838 frr; ribosome recycling factor
D Bphy_2722 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Bphy_0313 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Bphy_3442 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Bphy_2818 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Bphy_0849 translation elongation factor P K02356 efp; elongation factor P
D Bphy_1449 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Bphy_4287 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D Bphy_1745 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:bph03110]
D Bphy_0569 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Bphy_0938 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Bphy_6891 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Bphy_5495 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Bphy_1012 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Bphy_0069 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Bphy_2113 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Bphy_2497 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Bphy_1454 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D Bphy_2728 putative chaperone K04046 yegD; hypothetical chaperone protein
D Bphy_2333 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_1113 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_2496 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Bphy_6288 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Bphy_1455 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D Bphy_1436 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Bphy_2499 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Bphy_5262 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Bphy_6892 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Bphy_1110 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Bphy_4649 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Bphy_4650 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Bphy_5261 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Bphy_2501 RNA-binding S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D Bphy_2334 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Bphy_0471 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_0837 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_5776 PDZ/DHR/GLGF domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D Bphy_5769 AAA ATPase central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Bphy_0879 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Bphy_1112 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Bphy_6007 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Bphy_1125 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Bphy_3033 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Bphy_0269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Bphy_1246 conserved hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D Bphy_0856 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D Bphy_7256 hydrogenase expression/synthesis HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Bphy_7255 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Bphy_1392 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Bphy_1393 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Bphy_1015 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Bphy_3988 peptidylprolyl isomerase FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D Bphy_4384 peptidylprolyl isomerase FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D Bphy_0586 peptidylprolyl isomerase FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D Bphy_1401 FKBP-type peptidyl-prolyl cis-trans isomerase 2-like protein K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Bphy_1023 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Bphy_6188 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Bphy_7333 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Bphy_0397 SurA domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Bphy_4109 Thioredoxin domain protein K03671 TXN; thioredoxin
D Bphy_0950 thioredoxin K03671 TXN; thioredoxin
D Bphy_0033 Thioredoxin domain protein K03671 TXN; thioredoxin
D Bphy_0516 thioredoxin K05838 ybbN; putative thioredoxin
D Bphy_5356 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D Bphy_0268 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D Bphy_2723 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Bphy_0186 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Bphy_0714 Disulphide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D Bphy_2706 putative thiol-disulfide interchange protein, DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Bphy_2810 Protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:bph04131]
D Bphy_5412 Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D Bphy_1423 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Bphy_0688 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D Bphy_3578 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Bphy_2598 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Bphy_0266 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Bphy_0460 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Bphy_2113 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:bph04121]
C 03051 Proteasome [BR:bph03051]
D Bphy_2113 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bph03032]
D Bphy_0868 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Bphy_2140 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_1917 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_3399 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_3067 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_1014 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_7326 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_6261 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_7592 DNA-binding protein HU-alpha K03530 hupB; DNA-binding protein HU-beta
D Bphy_1552 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Bphy_0747 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Bphy_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Bphy_0915 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Bphy_3942 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Bphy_0341 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Bphy_2079 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Bphy_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Bphy_2224 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Bphy_2586 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Bphy_1044 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Bphy_0677 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_0867 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_0951 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Bphy_1324 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Bphy_4419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Bphy_1343 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Bphy_2489 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D Bphy_0738 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Bphy_0003 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Bphy_2123 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Bphy_2124 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Bphy_5297 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Bphy_0032 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bph03036]
D Bphy_2992 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2993 Tetratricopeptide TPR_2 repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2996 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2997 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Bphy_2140 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_1917 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_3399 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_0841 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Bphy_3578 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Bphy_0116 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_2981 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_4285 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_2172 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_3585 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_3892 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
D Bphy_4587 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_6773 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_3930 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
D Bphy_6195 hypothetical protein K03746 hns; DNA-binding protein H-NS
D Bphy_3067 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_1014 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_7326 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_6261 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_7592 DNA-binding protein HU-alpha K03530 hupB; DNA-binding protein HU-beta
D Bphy_1552 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Bphy_0747 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Bphy_6288 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Bphy_6287 conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D Bphy_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Bphy_2520 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Bphy_2552 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Bphy_1711 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Bphy_1415 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Bphy_7420 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Bphy_3168 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Bphy_1829 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Bphy_2865 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_0766 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_3954 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_0159 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_1849 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_0118 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_0509 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_3054 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_5049 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_7497 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Bphy_1346 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Bphy_2196 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Bphy_1733 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D Bphy_2669 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Bphy_1438 Septum formation initiator K05589 ftsB; cell division protein FtsB
D Bphy_3824 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Bphy_2679 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Bphy_2089 cell division FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Bphy_0635 cell division FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Bphy_2680 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D Bphy_2670 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Bphy_2674 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Bphy_2668 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Bphy_2215 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Bphy_2659 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD
D Bphy_1718 AFG1-family ATPase K06916 zapE; cell division protein ZapE
D Bphy_0519 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Bphy_0647 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_0478 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_5503 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7712 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_2410 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_3492 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7211 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_0655 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Bphy_0656 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Bphy_0657 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Bphy_0062 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D Bphy_5202 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Bphy_0052 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Bphy_0051 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Bphy_0050 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Bphy_0048 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Bphy_3037 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_4151 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_2199 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_6545 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_7549 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_7204 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_4152 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_3036 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_7548 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_7203 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_2123 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Bphy_2124 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Bphy_3039 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Bphy_3038 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Bphy_0074 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D Bphy_4967 integrase family protein K03733 xerC; integrase/recombinase XerC
D Bphy_7315 integrase family protein K03733 xerC; integrase/recombinase XerC
D Bphy_0523 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Bphy_7458 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_6954 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_6955 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_7324 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_7622 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_7593 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_7594 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_7595 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_7620 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_7621 integrase family protein K04763 xerD; integrase/recombinase XerD
D Bphy_2189 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Bphy_2808 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bph03400]
D Bphy_4268 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Bphy_0522 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Bphy_4409 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Bphy_2703 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Bphy_3243 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Bphy_0320 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Bphy_2097 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Bphy_5309 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D Bphy_2661 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Bphy_5852 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Bphy_5533 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Bphy_4759 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Bphy_6695 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Bphy_0570 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Bphy_3088 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Bphy_5004 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Bphy_1363 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Bphy_5408 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Bphy_1310 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Bphy_3087 AlkA domain protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Bphy_1389 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Bphy_2985 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Bphy_7198 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Bphy_0319 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Bphy_0057 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Bphy_1478 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Bphy_5537 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Bphy_1448 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Bphy_1343 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Bphy_4419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Bphy_1549 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Bphy_0339 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Bphy_6320 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Bphy_1958 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Bphy_0851 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Bphy_1590 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Bphy_0801 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Bphy_2848 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Bphy_2847 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Bphy_2813 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Bphy_0670 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Bphy_0997 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Bphy_1399 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Bphy_2485 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Bphy_0539 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Bphy_3950 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Bphy_2079 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Bphy_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Bphy_2224 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Bphy_2586 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Bphy_1044 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Bphy_0677 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_0867 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Bphy_0951 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Bphy_0341 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Bphy_2141 DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D Bphy_1748 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Bphy_1749 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Bphy_1747 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Bphy_0440 recA protein K03553 recA; recombination protein RecA
D Bphy_2556 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Bphy_2557 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Bphy_2554 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Bphy_3022 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Bphy_0912 putative primosomal replication protein N, PriB K02686 priB; primosomal replication protein N
D Bphy_1358 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Bphy_2523 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Bphy_0843 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Bphy_0953 recombination protein RecR K06187 recR; recombination protein RecR
D Bphy_2505 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Bphy_4738 putative exonuclease RdgC K03554 rdgC; recombination associated protein RdgC
D Bphy_0980 Ku protein K10979 ku; DNA end-binding protein Ku
D Bphy_5208 Ku protein K10979 ku; DNA end-binding protein Ku
D Bphy_4772 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Bphy_7582 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Bphy_0981 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Bphy_0738 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Bphy_0003 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Bphy_5297 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Bphy_3067 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_1014 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_7326 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_6261 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Bphy_7592 DNA-binding protein HU-alpha K03530 hupB; DNA-binding protein HU-beta
D Bphy_7123 RecT protein K07455 recT; recombination protein RecT
D Bphy_2552 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Bphy_1552 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Bphy_0747 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Bphy_4797 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Bphy_2846 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Bphy_0116 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_2981 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_4285 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_2172 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_3585 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_3892 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
D Bphy_4587 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_6773 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Bphy_3930 conserved hypothetical protein K03746 hns; DNA-binding protein H-NS
D Bphy_6195 hypothetical protein K03746 hns; DNA-binding protein H-NS
D Bphy_3123 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Bphy_1630 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Bphy_3658 DNA-directed DNA polymerase K02336 polB; DNA polymerase II [EC:2.7.7.7]
D Bphy_1972 conserved hypothetical protein K14160 imuA; protein ImuA
D Bphy_7576 conserved hypothetical protein K14160 imuA; protein ImuA
D Bphy_1971 conserved hypothetical protein K14161 imuB; protein ImuB
D Bphy_1970 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D Bphy_0441 regulatory protein RecX K03565 recX; regulatory protein
D Bphy_3000 UvrD/REP helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D Bphy_1403 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Bphy_5281 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Bphy_6751 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Bphy_1167 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Bphy_3305 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Bphy_2639 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Bphy_2638 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bph03029]
D Bphy_2742 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Bphy_1729 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Bphy_1557 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Bphy_1337 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Bphy_2842 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Bphy_2855 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Bphy_0561 translation elongation factor G K02355 fusA; elongation factor G
D Bphy_6425 small GTP-binding protein K02355 fusA; elongation factor G
D Bphy_2843 translation elongation factor G K02355 fusA; elongation factor G
D Bphy_0842 GTP-binding protein Era K03595 era; GTPase
D Bphy_2560 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Bphy_2588 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Bphy_0381 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Bphy_0188 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Bphy_0054 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Bphy_0715 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Bphy_7797 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Bphy_0055 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Bphy_0053 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Bphy_4118 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D Bphy_0341 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Bphy_1330 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Bphy_3485 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Bphy_2497 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Bphy_2499 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Bphy_2333 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_1113 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_2334 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Bphy_2496 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Bphy_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Bphy_1455 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D Bphy_2723 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Bphy_2189 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Bphy_0286 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Bphy_0279 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Bphy_0285 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Bphy_3098 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Bphy_0283 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D Bphy_0857 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Bphy_0287 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Bphy_2113 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bph02000]
D Bphy_2077 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Bphy_3834 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Bphy_3454 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D Bphy_0393 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Bphy_4748 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Bphy_0860 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Bphy_5449 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Bphy_5251 response regulator receiver protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Bphy_4040 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D Bphy_2775 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Bphy_2125 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein
D Bphy_0169 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D Bphy_1629 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Bphy_1628 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Bphy_1627 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Bphy_1626 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Bphy_4405 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Bphy_6373 ABC molybdate transporter, periplasmic ligand binding protein K02020 modA; molybdate transport system substrate-binding protein
D Bphy_6011 extracellular solute-binding protein family 1 K02020 modA; molybdate transport system substrate-binding protein
D Bphy_4404 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Bphy_4403 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Bphy_6080 taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D Bphy_6202 NMT1/THI5 like domain protein K15551 tauA; taurine transport system substrate-binding protein
D Bphy_6082 binding-protein-dependent transport systems inner membrane component K15552 tauC; taurine transport system permease protein
D Bphy_6203 binding-protein-dependent transport systems inner membrane component K15552 tauC; taurine transport system permease protein
D Bphy_6081 ABC transporter related K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D Bphy_5229 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_4149 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_5226 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_7236 ABC sulfate ester transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_5227 Substrate-binding region of ABC-type glycine betaine transport system K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_3959 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_0955 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_1964 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_3603 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Bphy_1648 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_7235 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_7234 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_3601 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_0957 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_3961 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Bphy_1647 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_7233 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_4965 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_3602 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_0956 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_3960 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Bphy_1279 extracellular solute-binding protein family 1 K11073 potF; putrescine transport system substrate-binding protein
D Bphy_1276 Ornithine carbamoyltransferase K11074 potI; putrescine transport system permease protein
D Bphy_1277 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Bphy_1278 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Bphy_6038 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_4322 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_6575 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_1501 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_6274 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_5429 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_7064 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_6624 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_0221 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_7049 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_4443 extracellular solute-binding protein, family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_2382 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_5902 ABC spermidine/putrescine transporter, periplasmic ligand binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_7798 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Bphy_4324 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_5900 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6036 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6272 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6578 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6628 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_7052 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_2380 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_0223 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_1503 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_1502 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_7801 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_4446 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_7062 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Bphy_6579 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_7800 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_0222 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_7051 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_6273 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_4323 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_5901 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_6629 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_4445 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_6037 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_2381 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Bphy_6582 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_2383 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_6630 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_6039 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_7063 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_4321 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_1504 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_6271 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_0224 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_5903 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_7050 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_4444 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_7799 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Bphy_5065 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D Bphy_5068 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D Bphy_5067 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D Bphy_5066 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D Bphy_3286 choline ABC transporter, periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_3289 choline ABC transporter, periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_3294 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_3447 choline ABC transporter, periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_6868 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Bphy_3449 choline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D Bphy_6869 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Bphy_6870 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Bphy_3450 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Bphy_3175 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Bphy_3974 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Bphy_6301 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Bphy_2156 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Bphy_3181 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Bphy_3975 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Bphy_6300 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Bphy_2155 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Bphy_6201 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Bphy_3180 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Bphy_3976 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Bphy_6299 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Bphy_2353 ABC transporter related K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_0494 ABC transporter related K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_7445 ABC transporter related K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_5438 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_0631 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_6367 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_6661 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_4055 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_6366 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_0628 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Bphy_5435 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Bphy_6328 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Bphy_5436 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D Bphy_0629 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D Bphy_5437 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D Bphy_0630 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D Bphy_4217 Monosaccharide-transporting ATPase K10537 araF; L-arabinose transport system substrate-binding protein
D Bphy_2615 Monosaccharide-transporting ATPase K10537 araF; L-arabinose transport system substrate-binding protein
D Bphy_4219 Monosaccharide-transporting ATPase K10538 araH; L-arabinose transport system permease protein
D Bphy_2613 Monosaccharide-transporting ATPase K10538 araH; L-arabinose transport system permease protein
D Bphy_4218 ABC transporter related K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D Bphy_2614 ABC transporter related K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D Bphy_2341 D-xylose ABC transporter, periplasmic substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D Bphy_2339 Monosaccharide-transporting ATPase K10544 xylH; D-xylose transport system permease protein
D Bphy_2340 D-xylose ABC transporter, ATPase subunit K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D Bphy_3592 Monosaccharide-transporting ATPase K10552 frcB; fructose transport system substrate-binding protein
D Bphy_3593 Monosaccharide-transporting ATPase K10553 frcC; fructose transport system permease protein
D Bphy_3594 ABC transporter related K10554 frcA; fructose transport system ATP-binding protein
D Bphy_3460 rhamnose ABC transporter, periplasmic rhamnose-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D Bphy_3462 Monosaccharide-transporting ATPase K10560 rhaP; rhamnose transport system permease protein
D Bphy_3461 Monosaccharide-transporting ATPase K10561 rhaQ; rhamnose transport system permease protein
D Bphy_3463 ABC transporter related K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_2242 ABC sugar transporter, periplasmic ligand binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_1237 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5595 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_0500 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5185 putative signal peptide protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6343 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5157 putative simple sugar transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_5162 putative ABC transporter K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6804 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6817 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_6818 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_4302 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Bphy_2243 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_1235 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_5596 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_6344 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_0502 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_5160 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Bphy_5159 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Bphy_6815 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D Bphy_6816 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_5158 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_1236 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_2244 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_0501 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_5597 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_6345 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Bphy_5518 periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D Bphy_5515 Monosaccharide-transporting ATPase K23509 ytfT; galactofuranose transport system permease protein
D Bphy_5516 Monosaccharide-transporting ATPase K23509 ytfT; galactofuranose transport system permease protein
D Bphy_5517 ABC transporter related K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D Bphy_5372 extracellular solute-binding protein family 1 K17321 glpV; glycerol transport system substrate-binding protein
D Bphy_5369 binding-protein-dependent transport systems inner membrane component K17322 glpP; glycerol transport system permease protein
D Bphy_5370 binding-protein-dependent transport systems inner membrane component K17323 glpQ; glycerol transport system permease protein
D Bphy_5367 ABC transporter related K17324 glpS; glycerol transport system ATP-binding protein
D Bphy_5368 ABC transporter related K17325 glpT; glycerol transport system ATP-binding protein
D Bphy_2709 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Bphy_2710 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Bphy_2711 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Bphy_2712 ABC transporter related K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D Bphy_0490 extracellular solute-binding protein family 1 K10227 smoE; polyol transport system substrate-binding protein
D Bphy_0491 binding-protein-dependent transport systems inner membrane component K10228 smoF; polyol transport system permease protein
D Bphy_0492 binding-protein-dependent transport systems inner membrane component K10229 smoG; polyol transport system permease protein
D Bphy_1288 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Bphy_4187 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Bphy_1290 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Bphy_1289 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Bphy_1291 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Bphy_0986 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D Bphy_0987 ABC transporter related K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Bphy_0207 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Bphy_2768 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Bphy_3499 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Bphy_0205 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Bphy_3498 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Bphy_2769 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Bphy_0206 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Bphy_3497 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Bphy_2770 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Bphy_0208 protein of unknown function DUF330 K18480 linN; cholesterol transport system auxiliary component
D Bphy_3500 protein of unknown function DUF330 K18480 linN; cholesterol transport system auxiliary component
D Bphy_2766 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Bphy_6437 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Bphy_4132 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Bphy_2765 conserved hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D Bphy_7218 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Bphy_6371 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Bphy_6665 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Bphy_7451 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Bphy_4057 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Bphy_2351 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Bphy_2350 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Bphy_4058 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Bphy_6370 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Bphy_7450 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Bphy_6664 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Bphy_2349 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Bphy_4059 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Bphy_6369 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Bphy_7449 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Bphy_6663 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Bphy_6778 ABC sugar transporter, periplasmic ligand binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Bphy_4657 periplasmic binding protein/LacI transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Bphy_1597 ABC sugar transporter, periplasmic ligand binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Bphy_1150 ABC-type sugar transport system periplasmic component-like protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Bphy_1598 Monosaccharide-transporting ATPase K02057 ABC.SS.P; simple sugar transport system permease protein
D Bphy_4656 Monosaccharide-transporting ATPase K02057 ABC.SS.P; simple sugar transport system permease protein
D Bphy_4659 Monosaccharide-transporting ATPase K02057 ABC.SS.P; simple sugar transport system permease protein
D Bphy_4300 Monosaccharide-transporting ATPase K02057 ABC.SS.P; simple sugar transport system permease protein
D Bphy_1149 Monosaccharide-transporting ATPase K02057 ABC.SS.P; simple sugar transport system permease protein
D Bphy_1599 ABC transporter related K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_4301 ABC transporter related K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_4658 ABC transporter related K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_1148 ABC transporter related K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Bphy_0882 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Bphy_3120 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Bphy_0883 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Bphy_0884 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Bphy_0885 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Bphy_4622 phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D Bphy_4621 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Bphy_4623 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Bphy_0016 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_1780 cationic amino acid ABC transporter, periplasmic binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_3432 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_3780 cationic amino acid ABC transporter, periplasmic binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_4198 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_7494 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_7504 extracellular solute-binding protein family 3 K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Bphy_2165 polar amino acid ABC transporter, inner membrane subunit K10015 hisM; histidine transport system permease protein
D Bphy_1790 polar amino acid ABC transporter, inner membrane subunit K10015 hisM; histidine transport system permease protein
D Bphy_7502 polar amino acid ABC transporter, inner membrane subunit K10015 hisM; histidine transport system permease protein
D Bphy_2164 polar amino acid ABC transporter, inner membrane subunit K10016 hisQ; histidine transport system permease protein
D Bphy_1791 polar amino acid ABC transporter, inner membrane subunit K10016 hisQ; histidine transport system permease protein
D Bphy_2166 ABC transporter related K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_1789 ABC transporter related K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_7501 ABC transporter related K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_2163 cationic amino acid ABC transporter, periplasmic binding protein K10014 hisJ; histidine transport system substrate-binding protein
D Bphy_1156 extracellular solute-binding protein family 3 K10036 glnH; glutamine transport system substrate-binding protein
D Bphy_1155 polar amino acid ABC transporter, inner membrane subunit K10037 glnP; glutamine transport system permease protein
D Bphy_1154 ABC transporter related K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_2573 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_4578 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_4740 extracellular solute-binding protein family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Bphy_2571 polar amino acid ABC transporter, inner membrane subunit K10002 gltK; glutamate/aspartate transport system permease protein
D Bphy_2572 polar amino acid ABC transporter, inner membrane subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D Bphy_2570 ABC transporter related K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5479 ABC transporter related K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5100 extracellular solute-binding protein family 3 K10018 occT; octopine/nopaline transport system substrate-binding protein
D Bphy_5102 polar amino acid ABC transporter, inner membrane subunit K10019 occM; octopine/nopaline transport system permease protein
D Bphy_5101 polar amino acid ABC transporter, inner membrane subunit K10020 occQ; octopine/nopaline transport system permease protein
D Bphy_5103 ABC transporter related K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5881 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Bphy_1531 extracellular solute-binding protein family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D Bphy_5481 extracellular solute-binding protein family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D Bphy_5480 polar amino acid ABC transporter, inner membrane subunit K10009 tcyB; L-cystine transport system permease protein
D Bphy_1530 polar amino acid ABC transporter, inner membrane subunit K10009 tcyB; L-cystine transport system permease protein
D Bphy_1529 ABC transporter related K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_6859 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0112 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_7652 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_5889 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_2237 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3017 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3043 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3047 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0588 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_4932 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_6618 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_4465 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_2015 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_0197 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_6166 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3654 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Bphy_3042 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_3046 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_1607 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_0589 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_4462 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Bphy_3041 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1606 inner-membrane translocator K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_0590 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Bphy_3045 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Bphy_3049 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_0591 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_4463 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1605 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Bphy_1604 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_0592 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_3048 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_3040 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_4464 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Bphy_0761 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Bphy_5040 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Bphy_0290 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Bphy_0760 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Bphy_0759 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D Bphy_2251 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D Bphy_6254 putative urea/short-chain binding protein K11959 urtA; urea transport system substrate-binding protein
D Bphy_2252 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D Bphy_2253 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D Bphy_2254 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D Bphy_2255 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D Bphy_6880 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_3247 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_3866 ectoine/hydroxyectoine ABC transporter solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_5150 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_2369 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_7227 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_6677 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_6090 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_4862 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_2257 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_5146 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_5110 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_3795 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_4558 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_5989 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_7193 cytochrome c class I K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Bphy_3248 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_3249 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_3867 ectoine/hydroxyectoine ABC transporter, permease protein EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_3868 ectoine/hydroxyectoine ABC transporter, permease protein EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_5108 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_5109 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_7228 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_7229 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_2368 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_6679 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_6678 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_4861 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_4860 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_4556 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_6089 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_6088 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Bphy_5145 polar amino acid ABC transporter, inner membrane subunit K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5151 polar amino acid ABC transporter, inner membrane subunit K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_3869 ectoine/hydroxyectoine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_4859 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_2367 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_5107 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_6680 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_4555 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_6087 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Bphy_4505 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Bphy_4504 Alkaline phosphatase K15581 oppB; oligopeptide transport system permease protein
D Bphy_4503 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Bphy_4502 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D Bphy_4501 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D Bphy_2914 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_0183 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_2915 extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Bphy_2913 Nickel-transporting ATPase K12369 dppB; dipeptide transport system permease protein
D Bphy_2912 binding-protein-dependent transport systems inner membrane component K12370 dppC; dipeptide transport system permease protein
D Bphy_2911 oligopeptide/dipeptide ABC transporter, ATPase subunit K12371 dppD; dipeptide transport system ATP-binding protein
D Bphy_2910 oligopeptide/dipeptide ABC transporter, ATPase subunit K12372 dppF; dipeptide transport system ATP-binding protein
D Bphy_4225 extracellular solute-binding protein family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D Bphy_4224 binding-protein-dependent transport systems inner membrane component K13890 gsiC; glutathione transport system permease protein
D Bphy_4223 binding-protein-dependent transport systems inner membrane component K13891 gsiD; glutathione transport system permease protein
D Bphy_4226 oligopeptide/dipeptide ABC transporter, ATPase subunit K13892 gsiA; glutathione transport system ATP-binding protein
D Bphy_0558 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_6651 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_4004 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_6591 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_7644 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Bphy_0557 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_6650 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_7645 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_4005 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_6590 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Bphy_0556 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_6649 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_7646 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_4006 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_6589 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Bphy_7647 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_4007 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_6588 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_0555 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_6653 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Bphy_4008 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Bphy_7648 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Bphy_6652 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Bphy_1383 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Bphy_1382 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D Bphy_1381 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D Bphy_1380 ABC transporter related K13896 yejF; microcin C transport system ATP-binding protein
D Bphy_4041 periplasmic binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D Bphy_4043 transport system permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D Bphy_4044 ABC transporter related K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D Bphy_2207 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Bphy_2212 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Bphy_2211 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Bphy_0487 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Bphy_0485 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Bphy_0486 ABC transporter related K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D Bphy_2314 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Bphy_2313 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Bphy_2226 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Bphy_2227 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Bphy_0327 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Bphy_1635 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein
D Bphy_7719 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein
D Bphy_1634 nodulation ABC transporter NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Bphy_7720 nodulation ABC transporter NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Bphy_1446 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Bphy_1445 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Bphy_2763 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Bphy_4686 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Bphy_4327 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Bphy_2764 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Bphy_4685 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Bphy_4328 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Bphy_2050 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Bphy_6251 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Bphy_7011 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Bphy_3710 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Bphy_3628 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Bphy_3709 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Bphy_7010 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Bphy_1018 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Bphy_6252 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Bphy_3627 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Bphy_3711 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Bphy_0152 Bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D Bphy_0945 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Bphy_7634 multi antimicrobial extrusion protein MatE K26939 norM; MATE family, multidrug efflux pump
D Bphy_0797 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Bphy_0896 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Bphy_4174 major facilitator superfamily MFS_1 K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D Bphy_6015 metabolite/H+ symporter, major facilitator superfamily (MFS) K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D Bphy_6012 metabolite/H+ symporter, major facilitator superfamily (MFS) K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D Bphy_1226 metabolite/H+ symporter, major facilitator superfamily (MFS) K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D Bphy_5572 General substrate transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Bphy_1491 General substrate transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Bphy_6280 major facilitator superfamily MFS_1 K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Bphy_5468 major facilitator superfamily MFS_1 K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Bphy_6814 major facilitator superfamily MFS_1 K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Bphy_6667 major facilitator superfamily MFS_1 K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Bphy_4664 major facilitator superfamily MFS_1 K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Bphy_3800 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Bphy_3621 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Bphy_4698 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Bphy_4542 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Bphy_1698 major facilitator superfamily MFS_1 K08178 JEN; MFS transporter, SHS family, lactate transporter
D Bphy_6596 d-galactonate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D Bphy_3128 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Bphy_5675 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Bphy_4873 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Bphy_5654 major facilitator superfamily MFS_1 K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D Bphy_6030 major facilitator superfamily MFS_1 K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D Bphy_6035 major facilitator superfamily MFS_1 K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D Bphy_6876 major facilitator superfamily MFS_1 K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D Bphy_4990 major facilitator superfamily MFS_1 K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D Bphy_4191 4-hydroxyphenylacetate transporter K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D Bphy_3469 major facilitator superfamily MFS_1 K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D Bphy_4009 major facilitator superfamily MFS_1 K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D Bphy_6105 major facilitator superfamily MFS_1 K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D Bphy_3798 major facilitator superfamily MFS_1 K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D Bphy_6160 major facilitator superfamily MFS_1 K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D Bphy_6376 major facilitator superfamily MFS_1 K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D Bphy_4944 major facilitator superfamily MFS_1 K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D Bphy_6976 major facilitator superfamily MFS_1 K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D Bphy_4540 major facilitator superfamily MFS_1 K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter
D Bphy_3444 major facilitator superfamily MFS_1 K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D Bphy_2337 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Bphy_6183 cyclic nucleotide-binding protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Bphy_5658 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Bphy_1398 major facilitator superfamily MFS_1 K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D Bphy_1360 major facilitator superfamily MFS_1 K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D Bphy_0059 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Bphy_0624 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Bphy_5225 major facilitator superfamily MFS_1 K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D Bphy_3215 major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D Bphy_0415 major facilitator superfamily MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D Bphy_2432 major facilitator superfamily MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D Bphy_1726 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Bphy_3361 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Bphy_4020 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Bphy_5195 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Bphy_4495 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Bphy_5000 major facilitator superfamily MFS_1 K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Bphy_4663 major facilitator superfamily MFS_1 K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D Bphy_3792 major facilitator superfamily MFS_1 K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D Bphy_2143 major facilitator superfamily MFS_1 K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D Bphy_1587 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Bphy_0084 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D Bphy_6853 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Bphy_6200 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Bphy_3311 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Bphy_6611 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Bphy_4244 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Bphy_0262 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Bphy_6062 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Bphy_0261 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Bphy_0295 phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D Bphy_0296 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Bphy_0260 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Bphy_0324 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Bphy_3104 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Bphy_2982 MIP family channel protein K06188 aqpZ; aquaporin Z
D Bphy_0357 major intrinsic protein K06188 aqpZ; aquaporin Z
D Bphy_1119 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D Bphy_3503 TrkA-N domain protein K10716 kch; voltage-gated potassium channel
D Bphy_6351 TrkA-N domain protein K10716 kch; voltage-gated potassium channel
D Bphy_6452 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D Bphy_0145 K channel inward rectifier conserved region 2 domain protein K08715 IRPC; inward rectifier potassium channel
D Bphy_0257 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Bphy_1761 Rh family protein/ammonium transporter K03320 amt; ammonium transporter, Amt family
D Bphy_1257 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_2548 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_5568 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_5453 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_1982 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_0144 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_2898 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_4314 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_3352 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_5865 Glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Bphy_2740 Glutathione S-transferase domain K03599 sspA; stringent starvation protein A
D Bphy_1424 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease
D Bphy_0993 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Bphy_2483 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Bphy_1220 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Bphy_5311 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Bphy_1754 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Bphy_3367 Urea transporter K08717 utp; urea transporter
D Bphy_4205 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Bphy_2977 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D Bphy_2976 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Bphy_4204 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Bphy_2590 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Bphy_1946 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Bphy_1947 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Bphy_2589 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Bphy_2452 protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D Bphy_2453 protein TolR K03560 tolR; biopolymer transport protein TolR
D Bphy_1239 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Bphy_5383 Mg2 transporter protein CorA family protein K16074 zntB; zinc transporter
D Bphy_1762 CrcB protein K06199 crcB; fluoride exporter
D Bphy_2184 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein
D Bphy_1494 protein of unknown function DUF1211 K24915 TMEM175; TMEM175 potassium channel family protein
D Bphy_2654 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Bphy_4386 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Bphy_3288 porin Gram-negative type K08720 ompU; outer membrane protein OmpU
D Bphy_2620 OmpA domain protein transmembrane region-containing protein K16079 omp31; outer membrane immunogenic protein
D Bphy_0737 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Bphy_3084 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Bphy_3148 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Bphy_3199 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Bphy_5373 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D Bphy_2213 TonB-dependent receptor plug K16092 btuB; vitamin B12 transporter
D Bphy_6693 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Bphy_3453 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Bphy_4636 RND efflux system, outer membrane lipoprotein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system
D Bphy_6520 RND efflux system, outer membrane lipoprotein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system
D Bphy_0480 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_0649 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3490 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_5505 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3507 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_1060 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Bphy_3278 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Bphy_2473 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Bphy_1690 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Bphy_1330 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Bphy_3485 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Bphy_1417 outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D Bphy_1426 putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D Bphy_1523 putative exported lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D Bphy_0966 putative competence lipoprotein, ComL K05807 bamD; outer membrane protein assembly factor BamD
D Bphy_2592 SmpA/OmlA domain protein K06186 bamE; outer membrane protein assembly factor BamE
D Bphy_2194 surface antigen (D15) K07278 tamA; translocation and assembly module TamA
D Bphy_2193 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB
D Bphy_1487 YadA domain protein K21449 ata; trimeric autotransporter adhesin
D Bphy_2583 YadA domain protein K21449 ata; trimeric autotransporter adhesin
D Bphy_1526 YadA domain protein K21449 ata; trimeric autotransporter adhesin
D Bphy_2582 YadA domain protein K21449 ata; trimeric autotransporter adhesin
D Bphy_4338 YadA domain protein K21449 ata; trimeric autotransporter adhesin
D Bphy_3149 Haemagluttinin domain protein K21449 ata; trimeric autotransporter adhesin
D Bphy_0328 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D Bphy_0329 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC
D Bphy_0396 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D Bphy_3482 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D Bphy_2587 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D Bphy_3253 cellulose synthase operon C domain protein K20543 bcsC; cellulose synthase operon protein C
D Bphy_0408 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein
D Bphy_2921 LrgA family protein K06518 cidA; holin-like protein
D Bphy_0601 amino acid permease-associated region K11734 aroP; aromatic amino acid transport protein AroP
D Bphy_6223 amino acid permease-associated region K11735 gabP; GABA permease
D Bphy_6620 amino acid permease-associated region K11735 gabP; GABA permease
D Bphy_6446 amino acid permease-associated region K03756 potE; putrescine:ornithine antiporter
D Bphy_1089 arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D Bphy_3501 Amino acid transporter-like protein K03758 arcD; arginine:ornithine antiporter / lysine permease
D Bphy_0006 ethanolamine transproter K16238 eat; ethanolamine permease
D Bphy_3765 amino acid permease-associated region K16263 yjeH; amino acid efflux transporter
D Bphy_0724 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Bphy_4635 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18902 bpeF; multidrug efflux pump
D Bphy_1266 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D Bphy_3505 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D Bphy_3538 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D Bphy_7711 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Bphy_5504 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_0648 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_0479 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_3491 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_2411 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Bphy_1772 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D Bphy_3488 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D Bphy_1773 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D Bphy_3487 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D Bphy_1659 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D Bphy_2052 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Bphy_0518 protein of unknown function DUF6 transmembrane K15268 eamA; O-acetylserine/cysteine efflux transporter
D Bphy_1846 protein of unknown function DUF6 transmembrane K11939 rhtA; inner membrane transporter RhtA
D Bphy_7811 protein of unknown function DUF6 transmembrane K11939 rhtA; inner membrane transporter RhtA
D Bphy_4122 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D Bphy_2413 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D Bphy_1170 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D Bphy_5052 protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein
D Bphy_2578 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D Bphy_5761 2-keto-3-deoxygluconate transporter K02526 kdgT; 2-keto-3-deoxygluconate permease
D Bphy_5835 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D Bphy_1521 L-lactate transport K03303 lutP; lactate permease
D Bphy_5375 L-lactate transport K03303 lutP; lactate permease
D Bphy_3245 sodium/calcium exchanger membrane region K07300 chaA; Ca2+:H+ antiporter
D Bphy_1936 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter
D Bphy_7091 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter
D Bphy_5873 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter
D Bphy_2596 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Bphy_6387 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Bphy_0225 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Bphy_6010 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Bphy_5554 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Bphy_0139 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D Bphy_5291 sodium/hydrogen exchanger K24160 NHA1; sodium/hydrogen antiporter
D Bphy_5015 potassium efflux system protein K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D Bphy_0332 sodium/hydrogen exchanger K03455 KEA1_2_3; K+:H+ antiporter
D Bphy_0716 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D Bphy_0138 uracil-xanthine permease K09016 rutG; putative pyrimidine permease RutG
D Bphy_0481 xanthine permease K24206 uacT; uric acid transporter
D Bphy_1821 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Bphy_5121 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Bphy_2103 benzoate transporter K05782 benE; benzoate membrane transport protein
D Bphy_1258 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Bphy_5024 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Bphy_4484 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Bphy_0660 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Bphy_5777 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D Bphy_4415 Chromate transporter K07240 chrA; chromate transporter
D Bphy_4416 Chromate transporter K07240 chrA; chromate transporter
D Bphy_2121 Chromate transporter K07240 chrA; chromate transporter
D Bphy_5139 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D Bphy_0559 high-affinity nickel-transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D Bphy_5025 cyclic nucleotide-binding K03321 TC.SULP; sulfate permease, SulP family
D Bphy_5628 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D Bphy_3504 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Bphy_4477 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Bphy_2397 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Bphy_4637 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D Bphy_3226 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D Bphy_1280 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D Bphy_6992 TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D Bphy_4758 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D Bphy_0218 sodium-dependent inorganic phosphate (Pi) transporter K03324 yjbB; phosphate:Na+ symporter
D Bphy_0532 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Bphy_6747 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D Bphy_4723 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Bphy_1407 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Bphy_1830 Lysine exporter protein (LYSE/YGGA) K06895 lysE; L-lysine exporter family protein LysE/ArgO
D Bphy_0613 Lysine exporter protein (LYSE/YGGA) K06895 lysE; L-lysine exporter family protein LysE/ArgO
D Bphy_7782 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein
D Bphy_4701 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein
D Bphy_3092 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein
D Bphy_2876 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein
D Bphy_0100 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein
D Bphy_5524 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein
D Bphy_1841 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein
D Bphy_3132 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein
D Bphy_0804 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Bphy_0457 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Bphy_0458 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Bphy_0803 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Bphy_5265 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein
D Bphy_6440 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Bphy_3136 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Bphy_2756 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Bphy_2674 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Bphy_0688 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D Bphy_1955 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D Bphy_1957 conserved hypothetical protein K07230 p19; periplasmic iron binding protein
D Bphy_1945 TonB family protein K03832 tonB; periplasmic protein TonB
D Bphy_0664 TonB protein K03832 tonB; periplasmic protein TonB
D Bphy_2456 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Bphy_2454 protein TolA K03646 tolA; colicin import membrane protein
D Bphy_2455 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D Bphy_5087 malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D Bphy_5085 malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D Bphy_6184 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_6185 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_6187 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Bphy_4494 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Bphy_4999 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Bphy_3362 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Bphy_4021 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Bphy_1725 efflux pump membrane protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Bphy_3836 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Bphy_3455 conserved hypothetical protein K13408 cvaA; membrane fusion protein
D Bphy_4634 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D Bphy_1265 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D Bphy_3539 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D Bphy_0647 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_0478 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_5503 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7712 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_2410 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_3492 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7211 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_3506 efflux transporter, RND family, MFP subunit K21137 triB; membrane fusion protein, multidrug efflux system
D Bphy_1771 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Bphy_3489 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Bphy_1689 exopolysaccharide transport protein family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_3276 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_2472 exopolysaccharide transport protein family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_1061 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_3733 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_6733 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Bphy_6895 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Bphy_4307 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Bphy_1294 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Bphy_0431 copper resistance D domain protein K07245 pcoD; copper resistance protein D
D Bphy_2037 copper resistance D domain protein K07245 pcoD; copper resistance protein D
D Bphy_2038 copper resistance protein CopC K07156 copC; copper resistance protein C
D Bphy_0430 copper resistance protein CopC K07156 copC; copper resistance protein C
D Bphy_5565 MltA-interacting MipA family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:bph02044]
D Bphy_3834 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Bphy_3836 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Bphy_3453 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Bphy_3455 conserved hypothetical protein K13408 cvaA; membrane fusion protein
D Bphy_3454 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D Bphy_7426 AAA ATPase K02450 gspA; general secretion pathway protein A
D Bphy_3073 putative general secretory pathway protein C K02452 gspC; general secretion pathway protein C
D Bphy_3070 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Bphy_7395 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Bphy_3071 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Bphy_3072 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D Bphy_3074 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D Bphy_3075 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D Bphy_3076 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D Bphy_3077 putative general secretory pathway protein J K02459 gspJ; general secretion pathway protein J
D Bphy_3078 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D Bphy_3079 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D Bphy_3080 General secretion pathway M protein K02462 gspM; general secretion pathway protein M
D Bphy_3081 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D Bphy_2657 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Bphy_0446 putative type IV fimbrial pilin protein K02650 pilA; type IV pilus assembly protein PilA
D Bphy_2655 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Bphy_2656 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Bphy_2443 conserved hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D Bphy_2795 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D Bphy_2445 conserved hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D Bphy_2447 conserved hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D Bphy_4371 conserved hypothetical protein K08086 fimV; pilus assembly protein FimV
D Bphy_5318 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Bphy_5320 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Bphy_4344 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Bphy_5321 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Bphy_4345 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Bphy_5323 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Bphy_5324 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Bphy_4346 FHA domain containing protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Bphy_4347 type II secretion system protein K12510 tadB; tight adherence protein B
D Bphy_5325 type II secretion system protein K12510 tadB; tight adherence protein B
D Bphy_5326 type II secretion system protein K12511 tadC; tight adherence protein C
D Bphy_4348 type II secretion system protein K12511 tadC; tight adherence protein C
D Bphy_5317 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Bphy_5316 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Bphy_0607 protein of unknown function YGGT K02221 yggT; YggT family protein
D Bphy_0940 putative DNA uptake protein, ComEA-like protein K02237 comEA; competence protein ComEA
D Bphy_0753 conserved hypothetical protein K02237 comEA; competence protein ComEA
D Bphy_1443 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Bphy_2963 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Bphy_2964 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Bphy_2926 flagellar biosynthetic protein FlhB K04061 flhB2; flagellar biosynthesis protein
D Bphy_2931 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Bphy_2933 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Bphy_2934 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Bphy_2939 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Bphy_2940 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Bphy_2941 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Bphy_2942 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Bphy_2943 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Bphy_7537 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1
D Bphy_7535 type IV secretory pathway VirB3 family protein K03198 virB3; type IV secretion system protein VirB3
D Bphy_7534 CagE TrbE VirB component of type IV transporter system K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D Bphy_7533 type IV secretion system family protein K03200 virB5; type IV secretion system protein VirB5
D Bphy_7531 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D Bphy_7530 VirB8 family protein K03203 virB8; type IV secretion system protein VirB8
D Bphy_7529 Conjugal transfer protein TrbG/VirB9/CagX K03204 virB9; type IV secretion system protein VirB9
D Bphy_7528 conjugation TrbI family protein K03195 virB10; type IV secretion system protein VirB10
D Bphy_7526 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D Bphy_7522 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Bphy_7414 Cobyrinic acid ac-diamide synthase K12055 K12055; chromosome partitioning related protein ParA
D Bphy_2706 putative thiol-disulfide interchange protein, DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Bphy_5996 conserved hypothetical IcmF-like protein K11891 impL; type VI secretion system protein ImpL
D Bphy_6108 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D Bphy_5995 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D Bphy_6109 type VI secretion system OmpA/MotB family protein K11892 impK; type VI secretion system protein ImpK
D Bphy_6107 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D Bphy_7017 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D Bphy_6110 type VI secretion protein, VC_A0114 family K11893 impJ; type VI secretion system protein ImpJ
D Bphy_5994 type VI secretion protein, VC_A0114 family K11893 impJ; type VI secretion system protein ImpJ
D Bphy_7015 type VI secretion protein, VC_A0111 family K11895 impH; type VI secretion system protein ImpH
D Bphy_6120 type VI secretion protein, VC_A0111 family K11895 impH; type VI secretion system protein ImpH
D Bphy_5983 type VI secretion protein, VC_A0111 family K11895 impH; type VI secretion system protein ImpH
D Bphy_6119 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG
D Bphy_5982 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG
D Bphy_0022 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG
D Bphy_7023 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG
D Bphy_6118 type VI secretion system lysozyme-related protein K11897 impF; type VI secretion system protein ImpF
D Bphy_5981 type VI secretion system lysozyme-related protein K11897 impF; type VI secretion system protein ImpF
D Bphy_6113 type VI secretion protein, EvpB/VC_A0108 family K11900 impC; type VI secretion system protein ImpC
D Bphy_5979 type VI secretion protein, EvpB/VC_A0108 family K11900 impC; type VI secretion system protein ImpC
D Bphy_6114 type VI secretion protein, VC_A0107 family K11901 impB; type VI secretion system protein ImpB
D Bphy_5978 type VI secretion protein, VC_A0107 family K11901 impB; type VI secretion system protein ImpB
D Bphy_6121 ImpA domain protein K11902 impA; type VI secretion system protein ImpA
D Bphy_5997 type VI secretion-associated protein, ImpA family K11902 impA; type VI secretion system protein ImpA
D Bphy_7014 ImpA domain protein K11902 impA; type VI secretion system protein ImpA
D Bphy_7365 type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D Bphy_5980 protein of unknown function DUF796 K11903 hcp; type VI secretion system secreted protein Hcp
D Bphy_6112 type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D Bphy_3341 protein of unknown function DUF796 K11903 hcp; type VI secretion system secreted protein Hcp
D Bphy_1932 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_0023 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_6124 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_5985 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_5744 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_3640 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_7022 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_5197 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Bphy_6111 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D Bphy_6115 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D Bphy_5984 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D Bphy_6117 virulence protein SciE type K11898 impE; type VI secretion system protein ImpE
D Bphy_5993 conserved hypothetical protein K11918 lip3; type VI secretion system protein
D Bphy_2664 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Bphy_0269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Bphy_2527 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Bphy_2854 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Bphy_2528 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Bphy_2010 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Bphy_2819 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Bphy_2643 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Bphy_0308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Bphy_2526 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Bphy_3098 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Bphy_2748 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Bphy_2747 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Bphy_2746 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bph02042]
D Bphy_7691 Endonuclease/exonuclease/phosphatase K11014 cdtB; cytolethal distending toxin subunit B
D Bphy_2654 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Bphy_4386 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Bphy_0427 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
D Bphy_3755 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7067 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_5529 phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_6939 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_1546 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D Bphy_7081 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:bph02022]
D Bphy_0888 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Bphy_0887 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Bphy_1002 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2403 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2159 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_2784 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_3495 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_5042 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Bphy_1003 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_2160 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_2783 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_2778 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_3494 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_3927 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_2404 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Bphy_3928 integral membrane sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Bphy_3929 two component transcriptional regulator, winged helix family K07664 baeR; two-component system, OmpR family, response regulator BaeR
D Bphy_6518 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Bphy_3963 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Bphy_3962 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Bphy_6519 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Bphy_6232 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_6336 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_1184 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Bphy_1183 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_6233 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_6335 two component transcriptional regulator, winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Bphy_2054 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Bphy_2053 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Bphy_3957 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D Bphy_3958 two component transcriptional regulator, winged helix family K07774 tctD; two-component system, OmpR family, response regulator TctD
D Bphy_0470 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Bphy_3964 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Bphy_3111 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Bphy_4064 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Bphy_1190 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Bphy_0439 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Bphy_4527 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Bphy_3057 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Bphy_3110 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Bphy_5426 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Bphy_0469 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Bphy_3965 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Bphy_6191 multi-sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Bphy_5967 integral membrane sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Bphy_6192 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_5911 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_5955 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_6469 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_7761 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Bphy_1145 multi-sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Bphy_0098 histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Bphy_4270 histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Bphy_4333 response regulator receiver protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Bphy_0354 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_3459 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_2872 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_0355 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_0356 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Bphy_1508 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Bphy_4331 two component transcriptional regulator, LuxR family K07690 evgA; two-component system, NarL family, response regulator EvgA
D Bphy_4334 two component transcriptional regulator, LuxR family K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D Bphy_4335 two component transcriptional regulator, LuxR family K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D Bphy_6470 integral membrane sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D Bphy_7760 integral membrane sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D Bphy_1480 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Bphy_1479 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Bphy_0041 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Bphy_0042 two component transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Bphy_0847 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D Bphy_5668 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Bphy_0226 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Bphy_0227 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D Bphy_5669 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D Bphy_2974 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_3590 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_2968 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_3587 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_2975 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_4208 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_6398 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_2969 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_7044 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_5175 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Bphy_6399 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Bphy_5616 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Bphy_5391 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D Bphy_5389 response regulator receiver modulated diguanylate cyclase K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D Bphy_5390 response regulator receiver modulated CheB methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D Bphy_3992 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Bphy_0644 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Bphy_0067 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Bphy_0068 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA
D Bphy_0134 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D Bphy_4336 Hpt protein K20976 hptB; histidine phosphotransfer protein HptB
D Bphy_3446 ABC nitrate transporter, periplasmic ligand binding protein K22067 nasS; two-component system, oxyanion-binding sensor
D Bphy_3445 response regulator receiver and ANTAR domain protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D Bphy_4530 response regulator receiver sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:bph02035]
D Bphy_2974 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_3590 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Bphy_2973 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Bphy_4142 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Bphy_2970 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Bphy_4209 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Bphy_2971 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Bphy_4208 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_6398 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_2969 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_7044 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Bphy_5175 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Bphy_6399 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Bphy_2968 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_3587 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_2975 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Bphy_2967 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D Bphy_5616 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Bphy_1275 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5591 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_3227 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_4315 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_1586 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_0289 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5380 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5569 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5592 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_3823 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_4943 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_5545 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_6319 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_6805 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_0137 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Bphy_2287 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_0345 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_2972 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_1232 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_4305 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_6091 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_6386 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Bphy_4269 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D Bphy_2933 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Bphy_2934 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Bphy_2935 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Bphy_2940 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Bphy_2941 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Bphy_2942 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Bphy_2943 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Bphy_2963 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Bphy_2964 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Bphy_2932 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Bphy_2938 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Bphy_2939 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Bphy_2931 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Bphy_2955 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Bphy_2947 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Bphy_2779 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Bphy_2954 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Bphy_2937 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Bphy_2930 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Bphy_2936 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Bphy_2948 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Bphy_2949 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Bphy_2950 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Bphy_2952 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Bphy_2953 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Bphy_2956 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D Bphy_2951 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D Bphy_2958 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Bphy_2959 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Bphy_2945 FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D Bphy_2989 flagellin domain protein K02406 fliC; flagellin
D Bphy_2990 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Bphy_2929 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Bphy_2928 putative flagellar protein FliT K02423 fliT; flagellar protein FliT
D Bphy_2991 conserved hypothetical protein K02423 fliT; flagellar protein FliT
D Bphy_4639 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_2979 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_7083 flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D Bphy_4638 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_2978 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_7082 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Bphy_2960 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Bphy_4205 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Bphy_2977 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D Bphy_2976 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Bphy_4204 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Bphy_1531 extracellular solute-binding protein family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D Bphy_5481 extracellular solute-binding protein family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D Bphy_2946 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Bphy_4598 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Bphy_2962 GTP-binding signal recognition particle SRP54 G-domain K02404 flhF; flagellar biosynthesis protein FlhF
D Bphy_2961 flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D Bphy_0446 putative type IV fimbrial pilin protein K02650 pilA; type IV pilus assembly protein PilA
D Bphy_2655 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Bphy_2656 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Bphy_2657 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Bphy_2795 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D Bphy_2445 conserved hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D Bphy_2443 conserved hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D Bphy_5317 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Bphy_5316 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Bphy_5318 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Bphy_5320 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Bphy_4344 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Bphy_5321 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Bphy_4345 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Bphy_5323 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Bphy_5324 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Bphy_4346 FHA domain containing protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bph04812]
D Bphy_5202 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Bphy_0052 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Bphy_2668 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Bphy_2669 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Bphy_0655 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Bphy_0656 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Bphy_0657 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Bphy_3037 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_4151 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_2199 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_6545 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_7549 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_7204 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Bphy_4152 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_3036 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_7548 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Bphy_7203 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bph04147]
D Bphy_2113 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Bphy_3578 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Bphy_1439 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Bphy_2598 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Bphy_0459 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Bphy_0460 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Bphy_1392 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Bphy_3302 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Bphy_2333 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_1113 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Bphy_2497 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Bphy_1019 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Bphy_5161 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_4442 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_6029 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Bphy_1314 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Bphy_2842 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Bphy_2855 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Bphy_3878 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Bphy_2749 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Bphy_0152 Bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D Bphy_2685 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_1704 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_5806 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4871 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_0524 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4840 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4848 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_7005 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Bphy_4189 selenium-binding protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D Bphy_0975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4941 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1030 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0178 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_1703 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_0970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4497 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_4922 Propanoyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Bphy_2918 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Bphy_0535 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Bphy_0333 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Bphy_2183 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Bphy_5499 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Bphy_4992 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Bphy_1532 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Bphy_2434 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Bphy_6494 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_5951 Fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_0685 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Bphy_4391 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Bphy_0419 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Bphy_1481 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_5918 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_3572 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_6981 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_7784 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Bphy_2809 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Bphy_2866 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Bphy_3887 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Bphy_3055 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Bphy_6480 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Bphy_0029 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_6028 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_6995 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Bphy_2553 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Bphy_0777 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D Bphy_4997 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Bphy_5354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1719 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_1468 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Bphy_7738 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Bphy_0763 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Bphy_5956 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Bphy_4831 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Bphy_4828 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Bphy_7803 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Bphy_2574 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Bphy_0627 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_3342 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_2400 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Bphy_2011 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Bphy_0266 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bph02048]
D Bphy_4375 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Bphy_2140 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_1917 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_3399 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Bphy_3405 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Bphy_7134 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Bphy_6933 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Bphy_6932 conserved hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D Bphy_6871 restriction endonuclease K07448 mrr; restriction system protein
D Bphy_7187 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Bphy_5532 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Bphy_5635 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Bphy_1068 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Bphy_5634 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Bphy_5530 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Bphy_1856 YcfA family protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D Bphy_1857 protein of unknown function UPF0150 K18843 hicB; antitoxin HicB
D Bphy_7279 CcdB-like toxin protein K19163 ccdB; toxin CcdB
D Bphy_7280 Post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA
D Bphy_7598 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4
D Bphy_2668 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Bphy_5202 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Bphy_0052 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Bphy_2123 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Bphy_2124 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Bphy_1377 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Bphy_4365 protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D Bphy_5590 protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D Bphy_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:bph04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:bph04090]
C 01504 Antimicrobial resistance genes [BR:bph01504]
D Bphy_5477 SMP-30/Gluconolaconase/LRE domain protein K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D Bphy_2229 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Bphy_1164 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Bphy_6518 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Bphy_3963 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Bphy_3962 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Bphy_6519 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Bphy_4003 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Bphy_4019 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Bphy_0647 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_0478 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_5503 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7712 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_2410 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_3492 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7211 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Bphy_7711 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Bphy_5504 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_0648 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_0479 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_3491 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Bphy_2411 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Bphy_0480 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_0649 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3490 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_5505 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_3507 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Bphy_1265 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D Bphy_3539 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D Bphy_1266 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D Bphy_3505 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D Bphy_3538 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D Bphy_4439 transcriptional regulator, LuxR family K18304 lasR; LuxR family transcriptional regulator, quorum-sensing system regulator LasR
D Bphy_1967 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Bphy_3453 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Bphy_4331 two component transcriptional regulator, LuxR family K07690 evgA; two-component system, NarL family, response regulator EvgA
D Bphy_4632 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Bphy_5846 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Bphy_3326 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Bphy_3913 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Bphy_4634 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D Bphy_4635 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18902 bpeF; multidrug efflux pump
D Bphy_4636 RND efflux system, outer membrane lipoprotein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system
D Bphy_6520 RND efflux system, outer membrane lipoprotein, NodT family K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:bph00536]
D Bphy_5732 filamentous haemagglutinin family outer membrane protein K15125 fhaB; filamentous hemagglutinin
D Bphy_4291 filamentous haemagglutinin family outer membrane protein K15125 fhaB; filamentous hemagglutinin
D Bphy_7307 filamentous haemagglutinin family outer membrane protein K15125 fhaB; filamentous hemagglutinin
D Bphy_7346 filamentous haemagglutinin family outer membrane protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bph00537]
D Bphy_5280 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D Bphy_7106 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D Bphy_3302 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bph03100]
D Bphy_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0077 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0066 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0073 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Bphy_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0063 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Bphy_R0033 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Bphy_R0034 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Bphy_R0046 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Bphy_R0048 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Bphy_R0043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Bphy_R0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Bphy_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Bphy_R0047 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Bphy_R0049 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Bphy_R0071 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Bphy_R0027 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Bphy_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Bphy_R0036 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Bphy_R0055 tRNA-His K14226 tRNA-His; tRNA His
D Bphy_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0078 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0074 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0079 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0067 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0061 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Bphy_R0081 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0026 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0062 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Bphy_R0064 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Bphy_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Bphy_R0025 tRNA-Met K14230 tRNA-Met; tRNA Met
D Bphy_R0052 tRNA-Met K14230 tRNA-Met; tRNA Met
D Bphy_R0056 tRNA-Met K14230 tRNA-Met; tRNA Met
D Bphy_R0021 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Bphy_R0065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Bphy_R0053 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Bphy_R0039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Bphy_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Bphy_R0051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Bphy_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Bphy_R0059 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Bphy_R0070 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Bphy_R0032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Bphy_R0068 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Bphy_R0069 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Bphy_R0072 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Bphy_R0038 tRNA-Val K14237 tRNA-Val; tRNA Val
D Bphy_R0042 tRNA-Val K14237 tRNA-Val; tRNA Val
D Bphy_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val
D Bphy_R0076 tRNA-Val K14237 tRNA-Val; tRNA Val
D Bphy_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Bphy_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Bphy_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Bphy_R0002 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Bphy_R0009 Bacterial RNase P class A as predicted by Rfam (RF00010); RNA component of RNaseP K01978 rnpB; M1 RNA
D Bphy_R0001 tmRNA as predicted by Rfam (RF00023), score 193.38 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Bphy_3284 3-hydroxyacyl-CoA dehydrogenase NAD-binding K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D Bphy_4126 hopanoid-associated sugar epimerase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D Bphy_7422 Histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D Bphy_4245 short-chain dehydrogenase/reductase SDR K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D Bphy_5837 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D Bphy_4428 NAD-dependent epimerase/dehydratase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D Bphy_4423 3-hydroxyisobutyrate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D Bphy_0082 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D Bphy_7510 dehydrogenase E1 component K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D Bphy_3760 Pyruvate dehydrogenase (acetyl-transferring) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D Bphy_7509 Transketolase central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Bphy_3759 Transketolase central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Bphy_0503 Alcohol dehydrogenase GroES domain protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D Bphy_6739 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D Bphy_2358 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D Bphy_6831 Aldehyde Dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D Bphy_0095 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Bphy_4549 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Bphy_0093 Carbon-monoxide dehydrogenase (acceptor) K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Bphy_4548 molybdopterin dehydrogenase FAD-binding K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Bphy_4547 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Bphy_0094 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Bphy_0143 pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D Bphy_2868 pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D Bphy_5543 Indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D Bphy_1515 NADH:flavin oxidoreductase/NADH oxidase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D Bphy_1037 Alcohol dehydrogenase zinc-binding domain protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D Bphy_6510 coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D Bphy_3252 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Bphy_4016 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Bphy_7215 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Bphy_6801 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Bphy_6800 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Bphy_3251 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Bphy_4017 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Bphy_7214 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Bphy_7000 NADP oxidoreductase coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D Bphy_1567 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Bphy_4827 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Bphy_7737 Electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Bphy_2012 NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_2060 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_0958 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_7175 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_0984 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_4166 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_4930 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_4910 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_2359 Alcohol dehydrogenase GroES domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Bphy_2704 NAD(P)H dehydrogenase (quinone) K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Bphy_3656 alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D Bphy_5423 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Bphy_0511 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Bphy_7199 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Bphy_5425 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Bphy_1988 Glutathione S-transferase domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Bphy_1547 Glutathione S-transferase domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Bphy_3353 Glutathione S-transferase domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Bphy_4107 putative glutathione S-transferase domain protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D Bphy_2804 oxidoreductase molybdopterin binding K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D Bphy_7090 cytochrome B561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D Bphy_3756 Di-haem cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Bphy_4798 Catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D Bphy_3320 alpha/beta hydrolase fold protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D Bphy_5718 alpha/beta hydrolase fold protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D Bphy_0921 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Bphy_1775 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Bphy_2633 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Bphy_2439 Peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Bphy_6623 Peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Bphy_3657 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D Bphy_5223 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Bphy_7220 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Bphy_5683 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Bphy_5602 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Bphy_6409 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Bphy_6633 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Bphy_1000 alkylhydroperoxidase like protein, AhpD family K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D Bphy_1001 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D Bphy_5473 Dyp-type peroxidase family K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D Bphy_2162 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Bphy_3903 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Bphy_4606 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Bphy_1949 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Bphy_5233 cysteine dioxygenase type I K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D Bphy_3116 Taurine dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77]
D Bphy_5374 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D Bphy_4026 Oxidoreductase FAD-binding domain protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D Bphy_4036 lysine/ornithine N-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D Bphy_5963 conserved hypothetical cytosolic protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238]
D Bphy_5962 ferredoxin K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238]
D Bphy_5965 conserved hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238]
D Bphy_7232 putative xenobiotic (desulfurization)monooxygenase subunit A, NtaA/SnaA/SoxA/DszA family K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]
D Bphy_2040 multicopper oxidase type 3 K22348 moxA; manganese oxidase [EC:1.16.3.3]
D Bphy_4138 squalene-associated FAD-dependent desaturase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D Bphy_0099 Oxidoreductase FAD-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Bphy_7072 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Bphy_4150 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Bphy_3987 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Bphy_6512 coenzyme PQQ biosynthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D Bphy_6065 NADH dehydrogenase (quinone) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D Bphy_6067 conserved hypothetical protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D Bphy_6068 NADH dehydrogenase (quinone) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D Bphy_2246 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Bphy_0960 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Bphy_0513 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Bphy_4173 Radical SAM domain protein K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-]
D Bphy_5247 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D Bphy_7715 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D Bphy_5081 malonate decarboxylase, epsilon subunit K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D Bphy_5486 transferase hexapeptide repeat containing protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D Bphy_5093 Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D Bphy_0407 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Bphy_7717 Nodulation protein A NodA K14658 nodA; nodulation protein A [EC:2.3.1.-]
D Bphy_3012 formyl transferase domain protein K22885 K22885; dTDP-4-amino-4,6-dideoxyglucose formyltransferase [EC:2.3.1.-]
D Bphy_6404 GCN5-related N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D Bphy_1662 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Bphy_1663 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D Bphy_5250 glycosyl transferase group 1 K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D Bphy_0733 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Bphy_5086 triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Bphy_4139 squalene synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103]
D Bphy_2219 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Bphy_4424 type III effector Hrp-dependent outers K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D Bphy_6836 type III effector Hrp-dependent outers K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D Bphy_5836 conserved hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D Bphy_1322 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Bphy_2506 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Bphy_7464 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Bphy_0447 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Bphy_7399 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Bphy_5082 conserved hypothetical protein K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D Bphy_1026 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D Bphy_3874 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D Bphy_0180 (Isocitrate dehydrogenase (NADP(+))) kinase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D Bphy_0323 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Bphy_3614 formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D Bphy_3617 formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D Bphy_0954 L-carnitine dehydratase/bile acid-inducible protein F K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D Bphy_4694 formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D Bphy_0683 Formyl-CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D Bphy_5564 conserved hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Bphy_0271 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Bphy_4869 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Bphy_4876 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Bphy_0794 thioesterase superfamily protein K01073 E3.1.2.20; acyl-CoA hydrolase [EC:3.1.2.20]
D Bphy_3182 conserved hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Bphy_3283 conserved hypothetical protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33]
D Bphy_1565 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Bphy_1608 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Bphy_0697 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Bphy_4823 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Bphy_2451 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Bphy_1432 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Bphy_0892 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Bphy_5670 diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D Bphy_3290 choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D Bphy_1444 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Bphy_1045 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Bphy_3254 Cellulase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D Bphy_7773 conserved hypothetical protein K18576 XEG; xyloglucan-specific endo-beta-1,4-glucanase [EC:3.2.1.151]
D Bphy_0366 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D Bphy_0035 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Bphy_1342 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Bphy_4846 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Bphy_0015 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Bphy_2508 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Bphy_7722 polysaccharide deacetylase K14659 nodB; chitooligosaccharide deacetylase [EC:3.5.1.-]
D Bphy_6083 agmatinase K18459 gpuA; guanidinopropionase [EC:3.5.3.17]
D Bphy_1293 amidohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D Bphy_4894 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Bphy_5421 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Bphy_2702 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D Bphy_2478 NUDIX hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-]
D Bphy_0824 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D Bphy_3801 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Bphy_0167 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Bphy_7179 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Bphy_1615 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Bphy_5084 malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D Bphy_5083 malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D Bphy_4425 class II aldolase/adducin family protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D Bphy_5155 Altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D Bphy_6388 Mandelate racemase/muconate lactonizing protein K22209 tarD; D(-)-tartrate dehydratase [EC:4.2.1.81]
D Bphy_1020 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Bphy_3783 Pyridoxal-5'-phosphate-dependent protein beta subunit K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D Bphy_4654 RbsD or FucU transport K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D Bphy_6338 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D Bphy_3465 protein of unknown function DUF718 K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D Bphy_4427 Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D Bphy_0156 methylmalonyl-CoA mutase, large subunit K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D Bphy_7061 AMP-dependent synthetase and ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D Bphy_2625 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Bphy_6151 Hydantoinase B/oxoprolinase K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6]
D Bphy_6150 5-oxoprolinase (ATP-hydrolyzing) K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6]
D Bphy_6152 Acetone carboxylase gamma subunit K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6]
D Bphy_2096 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Bphy_1103 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Bphy_1097 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D Bphy_5608 putative signal transduction protein with CBS domains K04767 acuB; acetoin utilization protein AcuB
D Bphy_1464 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Bphy_5378 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Bphy_1463 protein of unknown function DUF162 K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Bphy_5376 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Bphy_5377 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
D Bphy_0809 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D Bphy_0389 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D Bphy_1453 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D Bphy_6980 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D Bphy_0807 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin
D Bphy_1457 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D Bphy_7734 NifQ family protein K15790 nifQ; nitrogen fixation protein NifQ
D Bphy_6016 CitB domain protein K13795 citB; citrate/tricarballylate utilization protein
D Bphy_6017 precorrin 3B synthase CobZ K13796 cobZ; tricarballylate dehydrogenase
D Bphy_6234 cytochrome b562 K15536 cybC; soluble cytochrome b562
D Bphy_7731 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX
D Bphy_7777 nitrogen fixation protein FixT K02593 nifT; nitrogen fixation protein NifT
D Bphy_7747 nitrogen fixation protein FixT K02593 nifT; nitrogen fixation protein NifT
D Bphy_7776 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D Bphy_7745 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D Bphy_7742 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D Bphy_7730 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D Bphy_7729 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Bphy_7739 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Bphy_0762 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Bphy_5957 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Bphy_4830 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Bphy_4829 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Bphy_7804 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Bphy_7736 putative ferredoxin like protein; FixX K03855 fixX; ferredoxin like protein
D Bphy_7740 nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
D Bphy_1287 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
D Bphy_2924 acyl-CoA dehydrogenase domain protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Bphy_3089 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D Bphy_6021 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D Bphy_2517 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Bphy_0748 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D Bphy_0749 Tetratricopeptide domain protein K19804 lapB; lipopolysaccharide assembly protein B
D Bphy_3255 cellulose synthase subunit B K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D Bphy_3153 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D Bphy_2177 HemY domain protein K02498 hemY; HemY protein
D Bphy_0377 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Bphy_5062 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
D Bphy_0376 Sterol-binding domain protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D Bphy_0255 protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D Bphy_3150 magnesium chelatase subunit ChlD K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
D Bphy_4146 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D Bphy_4103 Rieske (2Fe-2S) domain protein K22895 cruH; renierapurpurin 18,18'-hydroxylase
C 99999 Others
D Bphy_4661 DoxX family protein K15977 K15977; putative oxidoreductase
D Bphy_2202 DoxX family protein K15977 K15977; putative oxidoreductase
D Bphy_3904 DoxX family protein K15977 K15977; putative oxidoreductase
D Bphy_5722 DoxX family protein K15977 K15977; putative oxidoreductase
D Bphy_5140 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D Bphy_5201 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D Bphy_6756 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D Bphy_4289 GCN5-related N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Bphy_0567 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Bphy_4995 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Bphy_2727 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Bphy_0676 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Bphy_5169 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Bphy_6942 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Bphy_7382 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Bphy_5269 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Bphy_0256 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Bphy_1406 RNA binding S1 domain protein K06959 tex; protein Tex
C 99974 Translation
D Bphy_1105 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
D Bphy_4681 putative exonuclease involved in mRNA processing K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D Bphy_0568 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Bphy_1010 trigger factor K03545 tig; trigger factor
D Bphy_2803 Ferric reductase domain protein transmembrane component domain K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D Bphy_4521 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D Bphy_2261 UreE urease accessory domain protein K03187 ureE; urease accessory protein
D Bphy_2262 Urease accessory protein UreF K03188 ureF; urease accessory protein
D Bphy_2263 urease accessory protein UreG K03189 ureG; urease accessory protein
D Bphy_2256 Urease accessory protein UreD K03190 ureD; urease accessory protein
D Bphy_1318 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Bphy_7253 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Bphy_7261 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Bphy_7252 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Bphy_7251 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Bphy_7271 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Bphy_7254 SUA5/yciO/yrdC domain K04656 hypF; hydrogenase maturation protein HypF
D Bphy_7272 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Bphy_0230 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Bphy_4514 conserved hypothetical protein K07395 K07395; putative proteasome-type protease
D Bphy_6744 conserved hypothetical protein, thioredoxin-like fold K07396 K07396; putative protein-disulfide isomerase
D Bphy_2565 OsmC family protein K07397 yhfA; putative redox protein
D Bphy_1950 OsmC family protein K07397 yhfA; putative redox protein
D Bphy_2806 ResB family protein K07399 resB; cytochrome c biogenesis protein
D Bphy_0711 xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D Bphy_0089 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor
D Bphy_2420 xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D Bphy_5124 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Bphy_0585 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Bphy_0812 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Bphy_0123 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Bphy_2171 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Bphy_0034 DNA protecting protein DprA K04096 smf; DNA processing protein
D Bphy_0641 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Bphy_2132 Resolvase domain protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D Bphy_6401 Resolvase helix-turn-helix domain protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D Bphy_5751 putative helicase K06919 K06919; putative DNA primase/helicase
D Bphy_0963 PolB exonuclease domain-like 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D Bphy_7398 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D Bphy_4916 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D Bphy_4891 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_7466 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_3633 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_4962 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_7615 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_3165 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_3643 transposase K07483 K07483; transposase
D Bphy_4952 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_4917 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_7354 transposase IS3/IS911 family protein K07483 K07483; transposase
D Bphy_4918 IS66 Orf2 family protein K07484 K07484; transposase
D Bphy_4919 transposase IS66 K07484 K07484; transposase
D Bphy_7465 IS66 Orf2 family protein K07484 K07484; transposase
D Bphy_7616 IS66 Orf2 family protein K07484 K07484; transposase
D Bphy_7486 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Bphy_6180 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Bphy_4956 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Bphy_7352 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Bphy_7630 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Bphy_7431 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Bphy_7433 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Bphy_7434 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Bphy_7565 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Bphy_2789 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Bphy_5648 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Bphy_6139 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Bphy_4961 Integrase catalytic region K07497 K07497; putative transposase
D Bphy_4971 hypothetical protein K07497 K07497; putative transposase
D Bphy_4953 Integrase catalytic region K07497 K07497; putative transposase
D Bphy_4892 Integrase catalytic region K07497 K07497; putative transposase
D Bphy_7355 Integrase catalytic region K07497 K07497; putative transposase
D Bphy_5560 integrase family protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D Bphy_1270 phage shock protein A, PspA K03969 pspA; phage shock protein A
D Bphy_0952 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Bphy_1210 putative transport protein, YfdC-like protein K21990 yfdC; formate-nitrite transporter family protein
D Bphy_4770 putative transport protein, YfdC-like protein K21990 yfdC; formate-nitrite transporter family protein
D Bphy_1157 porin Gram-negative type K03285 TC.GBP; general bacterial porin, GBP family
D Bphy_3606 porin Gram-negative type K03285 TC.GBP; general bacterial porin, GBP family
D Bphy_0674 porin Gram-negative type K03285 TC.GBP; general bacterial porin, GBP family
D Bphy_3880 porin Gram-negative type K03285 TC.GBP; general bacterial porin, GBP family
D Bphy_4271 porin Gram-negative type K03285 TC.GBP; general bacterial porin, GBP family
D Bphy_6291 porin Gram-negative type K03285 TC.GBP; general bacterial porin, GBP family
D Bphy_6642 porin Gram-negative type K03285 TC.GBP; general bacterial porin, GBP family
D Bphy_0096 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Bphy_6324 citrate/H+ symporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D Bphy_4508 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D Bphy_0917 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Bphy_3854 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Bphy_3900 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Bphy_2107 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Bphy_3138 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Bphy_3191 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Bphy_7419 conserved hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D Bphy_0640 hydroxymethylpyrimidine transporter CytX K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Bphy_1533 NCS1 nucleoside transporter family K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Bphy_1302 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Bphy_4033 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Bphy_6281 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Bphy_2268 polysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family
D Bphy_3956 YidE/YbjL duplication K07085 K07085; putative transport protein
C 99978 Cell growth
D Bphy_1025 intracellular septation protein A K06190 ispZ; intracellular septation protein
D Bphy_1227 SpoVR family protein K06415 spoVR; stage V sporulation protein R
C 99993 Cell motility
D Bphy_4877 TfoX, N-terminal K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D Bphy_1083 ProQ activator of osmoprotectant transporter ProP K03607 proQ; ProP effector
D Bphy_6471 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Bphy_7759 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Bphy_1722 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Bphy_4486 CBS domain containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D Bphy_3698 CBS domain containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D Bphy_0411 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Bphy_0920 PhoH family protein K07175 phoH2; PhoH-like ATPase
D Bphy_1229 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D Bphy_4783 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC
D Bphy_5974 Non-specific serine/threonine protein kinase K08482 kaiC; circadian clock protein KaiC
D Bphy_0527 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein
D Bphy_5415 Rieske (2Fe-2S) domain protein K22747 AIFM3; apoptosis-inducing factor 3
C 99992 Structural proteins
D Bphy_0636 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D Bphy_0317 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D Bphy_4134 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Bphy_2767 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Bphy_2635 17 kDa surface antigen K06077 slyB; outer membrane lipoprotein SlyB
D Bphy_1329 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Bphy_4720 peptidase M23B K06194 nlpD; lipoprotein NlpD
D Bphy_3262 peptidase M23B K06194 nlpD; lipoprotein NlpD
D Bphy_0961 peptidase M23B K06194 nlpD; lipoprotein NlpD
D Bphy_5357 peptidase M23B K06194 nlpD; lipoprotein NlpD
D Bphy_0899 peptidase M23B K12943 ygeR; lipoprotein YgeR
D Bphy_3272 Capsule polysaccharide biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D Bphy_3528 OmpW family protein K07275 ompW; outer membrane protein
D Bphy_2790 OmpW family protein K07275 ompW; outer membrane protein
D Bphy_1282 OmpW family protein K07275 ompW; outer membrane protein
D Bphy_3509 OmpW family protein K07275 ompW; outer membrane protein
D Bphy_0988 AsmA family protein K07290 yhjG; AsmA family protein
D Bphy_4329 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein
D Bphy_6250 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Bphy_7009 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D Bphy_3712 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Bphy_1519 conserved hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB
D Bphy_1421 transcriptional regulator, XRE family K15539 rodZ; cytoskeleton protein RodZ
D Bphy_1584 protein of unknown function DUF1656 K21695 aaeX; protein AaeX
C 99994 Others
D Bphy_0886 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Bphy_7239 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Bphy_1944 BFD domain protein (2Fe-2S)-binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D Bphy_2811 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D Bphy_0141 CutC family protein K06201 cutC; copper homeostasis protein
D Bphy_3777 phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D Bphy_2695 ApaG domain protein K06195 apaG; ApaG protein
D Bphy_2800 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D Bphy_4879 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D Bphy_6042 FAD dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D Bphy_4567 FAD dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Bphy_4380 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Bphy_1863 glycoside hydrolase family 19 K03791 K03791; putative chitinase
D Bphy_0651 Mammalian cell entry related domain protein K06192 pqiB; paraquat-inducible protein B
D Bphy_2535 Mammalian cell entry related domain protein K06192 pqiB; paraquat-inducible protein B
D Bphy_5506 Mammalian cell entry related domain protein K06192 pqiB; paraquat-inducible protein B
D Bphy_3535 Mammalian cell entry related domain protein K06192 pqiB; paraquat-inducible protein B
D Bphy_0854 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein
D Bphy_3881 hypothetical protein K05811 yfiM; putative lipoprotein
D Bphy_5898 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_6056 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_5640 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_5879 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_4015 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_3244 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_4984 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_6356 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_2416 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Bphy_6509 coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D Bphy_6511 coenzyme PQQ synthesis D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D Bphy_7190 coenzyme PQQ synthesis D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D Bphy_0936 globin K06886 glbN; hemoglobin
D Bphy_2049 globin K06886 glbN; hemoglobin
D Bphy_5327 Patatin K07001 K07001; NTE family protein
D Bphy_1378 Patatin K07001 K07001; NTE family protein
D Bphy_1960 Patatin K07001 K07001; NTE family protein
D Bphy_1793 Patatin K07001 K07001; NTE family protein
D Bphy_5528 Patatin K07001 K07001; NTE family protein
D Bphy_6768 Patatin K07001 K07001; NTE family protein
D Bphy_6581 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) K07025 K07025; putative hydrolase of the HAD superfamily
D Bphy_2562 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D Bphy_7815 HesB/YadR/YfhF-family protein K15724 erpA; iron-sulfur cluster insertion protein
D Bphy_4516 ribonuclease BN K07058 K07058; membrane protein
D Bphy_1575 ribonuclease BN K07058 K07058; membrane protein
D Bphy_5700 ribonuclease BN K07058 K07058; membrane protein
D Bphy_7039 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D Bphy_1078 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D Bphy_2080 Rhodanese domain protein K07146 K07146; UPF0176 protein
D Bphy_2105 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D Bphy_4084 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D Bphy_6609 protein of unknown function DUF336 K11477 glcG; glc operon protein GlcG
D Bphy_1953 protein of unknown function DUF336 K11477 glcG; glc operon protein GlcG
D Bphy_4042 ferric iron reductase K13255 fhuF; ferric iron reductase protein FhuF
D Bphy_0855 putative inner membrane protein K02351 K02351; putative membrane protein
D Bphy_4795 conserved hypothetical protein K02351 K02351; putative membrane protein
D Bphy_2046 LemA family protein K03744 lemA; LemA protein
D Bphy_1130 LemA family protein K03744 lemA; LemA protein
D Bphy_0806 CreA family protein K05805 creA; CreA protein
D Bphy_1146 CreA family protein K05805 creA; CreA protein
D Bphy_4379 Sporulation domain protein K03749 dedD; DedD protein
D Bphy_2484 SNARE associated Golgi protein K03975 dedA; membrane-associated protein
D Bphy_3536 integral membrane protein, PqiA family K03808 pqiA; paraquat-inducible protein A
D Bphy_2534 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D Bphy_0650 integral membrane protein, PqiA family K03808 pqiA; paraquat-inducible protein A
D Bphy_2533 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D Bphy_2917 membrane protein of unknown function K08972 K08972; putative membrane protein
D Bphy_0863 membrane protein-like protein K08983 K08983; putative membrane protein
D Bphy_6258 conserved hypothetical protein K08995 K08995; putative membrane protein
D Bphy_5299 conserved hypothetical protein K08995 K08995; putative membrane protein
D Bphy_3670 conserved hypothetical protein K08995 K08995; putative membrane protein
D Bphy_6394 conserved hypothetical protein K08995 K08995; putative membrane protein
D Bphy_0175 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D Bphy_1495 Cupin 2 conserved barrel domain protein K11312 K11312; cupin 2 domain-containing protein
D Bphy_7259 HupH hydrogenase expression protein K03618 hyaF; hydrogenase-1 operon protein HyaF
D Bphy_7260 hydrogenase-1 expression HyaE K03619 hyaE; hydrogenase-1 operon protein HyaE
D Bphy_6473 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D Bphy_1046 Ankyrin K06867 K06867; uncharacterized protein
D Bphy_4177 Ankyrin K06867 K06867; uncharacterized protein
D Bphy_7751 Ankyrin K06867 K06867; uncharacterized protein
D Bphy_2047 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Bphy_6854 conserved hypothetical protein K06889 K06889; uncharacterized protein
D Bphy_4571 PGAP1 family protein K06889 K06889; uncharacterized protein
D Bphy_6547 alpha/beta hydrolase BEM46 K06889 K06889; uncharacterized protein
D Bphy_5947 protein of unknown function DUF201 K06913 K06913; uncharacterized protein
D Bphy_6483 protein of unknown function DUF201 K06913 K06913; uncharacterized protein
D Bphy_2662 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Bphy_3577 protein of unknown function DUF296 K06934 K06934; uncharacterized protein
D Bphy_0163 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein
D Bphy_5051 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein
D Bphy_1281 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein
D Bphy_0603 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Bphy_2641 conserved hypothetical protein K06950 K06950; uncharacterized protein
D Bphy_6752 metallophosphoesterase K06953 K06953; uncharacterized protein
D Bphy_3781 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D Bphy_4430 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D Bphy_7499 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D Bphy_4199 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D Bphy_4066 Glyoxalase/bleomycin resistance protein/dioxygenase K06991 K06991; uncharacterized protein
D Bphy_6574 protein of unknown function DUF861 cupin_3 K06995 K06995; uncharacterized protein
D Bphy_2538 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D Bphy_2624 protein of unknown function UPF0227 K07000 K07000; uncharacterized protein
D Bphy_4865 exporter, RND superfamily K07003 K07003; uncharacterized protein
D Bphy_4133 hopanoid biosynthesis associated RND transporter like protein HpnN K07003 K07003; uncharacterized protein
D Bphy_4713 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 K07006; uncharacterized protein
D Bphy_5567 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 K07006; uncharacterized protein
D Bphy_0211 conserved hypothetical protein K07018 K07018; uncharacterized protein
D Bphy_0452 putative hydrolase of the alpha/beta-hydrolase fold K07019 K07019; uncharacterized protein
D Bphy_5559 conserved hypothetical protein K07020 K07020; uncharacterized protein
D Bphy_1115 conserved hypothetical protein K07028 K07028; uncharacterized protein
D Bphy_7037 conserved hypothetical protein K07028 K07028; uncharacterized protein
D Bphy_4098 Glyoxalase/bleomycin resistance protein/dioxygenase K07032 K07032; uncharacterized protein
D Bphy_7276 yecA family protein K07039 K07039; uncharacterized protein
D Bphy_7393 yecA family protein K07039 K07039; uncharacterized protein
D Bphy_6909 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Bphy_3223 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Bphy_3224 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Bphy_3359 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Bphy_2044 permease K07089 K07089; uncharacterized protein
D Bphy_1637 permease K07089 K07089; uncharacterized protein
D Bphy_3681 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Bphy_3996 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Bphy_6243 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Bphy_2414 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Bphy_1492 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Bphy_5078 metallophosphoesterase K07098 K07098; uncharacterized protein
D Bphy_1408 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D Bphy_5807 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Bphy_6241 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Bphy_6242 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Bphy_3059 nuclear protein SET K07117 K07117; uncharacterized protein
D Bphy_1186 nuclear protein SET K07117 K07117; uncharacterized protein
D Bphy_7591 nuclear protein SET K07117 K07117; uncharacterized protein
D Bphy_1755 NAD-dependent epimerase/dehydratase K07118 K07118; uncharacterized protein
D Bphy_4564 AIR synthase related protein domain protein K07123 K07123; uncharacterized protein
D Bphy_4200 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Bphy_0047 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Bphy_0321 peptidase S16 lon domain protein K07157 K07157; uncharacterized protein
D Bphy_0091 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D Bphy_3099 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Bphy_0562 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Bphy_4349 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Bphy_3943 conserved hypothetical protein K09117 K09117; uncharacterized protein
D Bphy_2878 protein of unknown function DUF82 K09122 K09122; uncharacterized protein
D Bphy_6435 protein of unknown function DUF355 K09129 K09129; uncharacterized protein
D Bphy_6498 conserved hypothetical protein K09154 K09154; uncharacterized protein
D Bphy_5940 conserved hypothetical protein K09154 K09154; uncharacterized protein
D Bphy_0213 protein of unknown function DUF493 K09158 K09158; uncharacterized protein
D Bphy_0090 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D Bphy_4550 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D Bphy_5611 protein of unknown function DUF917 K09703 K09703; uncharacterized protein
D Bphy_2608 protein of unknown function DUF985 K09705 K09705; uncharacterized protein
D Bphy_5627 protein of unknown function DUF188 K09768 K09768; uncharacterized protein
D Bphy_5625 YCII-related K09780 K09780; uncharacterized protein
D Bphy_1054 YCII-related K09780 K09780; uncharacterized protein
D Bphy_1228 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D Bphy_0537 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D Bphy_1163 protein of unknown function DUF465 K09794 K09794; uncharacterized protein
D Bphy_1316 protein of unknown function UPF0125 K09801 K09801; uncharacterized protein
D Bphy_5258 protein of unknown function DUF330 K09857 K09857; uncharacterized protein
D Bphy_2536 protein of unknown function DUF330 K09857 K09857; uncharacterized protein
D Bphy_5507 protein of unknown function DUF330 K09857 K09857; uncharacterized protein
D Bphy_0652 protein of unknown function DUF330 K09857 K09857; uncharacterized protein
D Bphy_3534 protein of unknown function DUF330 K09857 K09857; uncharacterized protein
D Bphy_6349 protein of unknown function DUF330 K09857 K09857; uncharacterized protein
D Bphy_1979 protein of unknown function DUF328 K09861 K09861; uncharacterized protein
D Bphy_2660 protein of unknown function DUF329 K09862 K09862; uncharacterized protein
D Bphy_5360 protein of unknown function DUF480 K09915 K09915; uncharacterized protein
D Bphy_2170 protein of unknown function DUF482 K09919 K09919; uncharacterized protein
D Bphy_0075 protein of unknown function DUF484 K09921 K09921; uncharacterized protein
D Bphy_0739 conserved hypothetical protein K09924 K09924; uncharacterized protein
D Bphy_4263 protein of unknown function DUF1006 K09927 K09927; uncharacterized protein
D Bphy_1411 conserved hypothetical protein K09937 K09937; uncharacterized protein
D Bphy_2345 PepSY-associated TM helix domain protein K09939 K09939; uncharacterized protein
D Bphy_2733 protein of unknown function DUF1415 K09941 K09941; uncharacterized protein
D Bphy_1640 putative cytoplasmic protein K09954 K09954; uncharacterized protein
D Bphy_3366 protein of unknown function DUF1089 K09957 K09957; uncharacterized protein
D Bphy_4163 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein
D Bphy_0009 protein of unknown function DUF779 K09959 K09959; uncharacterized protein
D Bphy_0136 conserved hypothetical protein K09965 K09965; uncharacterized protein
D Bphy_6085 conserved hypothetical protein K09967 K09967; uncharacterized protein
D Bphy_3977 conserved hypothetical protein K09967 K09967; uncharacterized protein
D Bphy_3978 conserved hypothetical protein K09967 K09967; uncharacterized protein
D Bphy_2909 GumN family protein K09973 K09973; uncharacterized protein
D Bphy_1811 protein of unknown function DUF886 K09975 K09975; uncharacterized protein
D Bphy_1362 Domain of unknown function DUF1853 K09977 K09977; uncharacterized protein
D Bphy_5519 conserved hypothetical protein K09981 K09981; uncharacterized protein
D Bphy_5053 helix-turn-helix-domain containing protein AraC type K09983 K09983; uncharacterized protein
D Bphy_4148 protein of unknown function DUF1272 K09984 K09984; uncharacterized protein
D Bphy_2102 conserved hypothetical protein K09989 K09989; uncharacterized protein
D Bphy_4641 conserved hypothetical protein K09990 K09990; uncharacterized protein
D Bphy_0916 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 7, 2024