+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium diphtheriae NCTC 13129
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cdi00010]
D DIP0518 Putative regulatory protein sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP1619 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP0832 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DIP1088 pfkA; 6-phosphofructokinase I K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DIP0939 Conserved hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D DIP2094 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DIP1308 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DIP0892 Putative glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DIP1310 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DIP1309 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DIP0389 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DIP0917 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DIP1553 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DIP1687 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DIP1639 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP2255 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP0427 Putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP2114 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DIP2115 Putative aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D DIP1011 Putative aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D DIP1882 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DIP1404 ppgK; polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D DIP2344 Conserved hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D DIP2180 pckG; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cdi00020]
D DIP0785 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DIP1283 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DIP0631 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DIP1002 odhA; 2-oxoglutarate dehydrogenase, E1 and E2 components K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP1902 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DIP0371 Putative succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DIP0372 Putative succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DIP0370 Putative succinate dehydrogenease cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DIP0938 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DIP1787 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DIP1492 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D DIP0646 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DIP2180 pckG; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D DIP1687 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DIP1639 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cdi00030]
D DIP0832 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DIP1304 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DIP1306 Putative phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D DIP1213 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DIP1320 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DIP1302 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DIP1303 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DIP1796 Putative ribose/galactose isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DIP0273 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D DIP0655 Putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D DIP1882 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DIP0903 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DIP0254 Putative transferase K00851 idnK; gluconokinase [EC:2.7.1.12]
D DIP2094 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DIP0939 Conserved hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D DIP1088 pfkA; 6-phosphofructokinase I K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cdi00040]
D DIP2141 Putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DIP0862 Putative urydyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DIP1320 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DIP1746 Putative xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:cdi00051]
D DIP0689 Putative mannose-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DIP0687 Putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DIP0274 Putative mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DIP0682 Putative mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DIP1088 pfkA; 6-phosphofructokinase I K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DIP0939 Conserved hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D DIP1430 Putative phosphofructokinase (PTS system) K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D DIP2094 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DIP1308 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DIP1796 Putative ribose/galactose isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cdi00052]
D DIP1011 Putative aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D DIP1674 Hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D DIP1015 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DIP1014 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D DIP1415 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DIP0862 Putative urydyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DIP1882 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DIP0518 Putative regulatory protein sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP1619 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP2203 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DIP1088 pfkA; 6-phosphofructokinase I K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DIP0989 Putative hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D DIP0532 Putative amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:cdi00053]
D DIP2141 Putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DIP2333 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:cdi00500]
D DIP0989 Putative hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D DIP0532 Putative amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D DIP0862 Putative urydyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DIP0992 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D DIP1065 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DIP1552 Putative glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D DIP0902 Putative hydrolase K01200 pulA; pullulanase [EC:3.2.1.41]
D DIP1726 Putative glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D DIP1066 Putative alpha-amylase (glucanase) K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D DIP0991 Putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D DIP1572 glgX; glycogen operon protein K01214 ISA; isoamylase [EC:3.2.1.68]
D DIP1966 Putative glycosyltransferase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D DIP1968 Putative trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D DIP1882 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DIP0518 Putative regulatory protein sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP1619 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP0832 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cdi00520]
D DIP2172 Putative secreted glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DIP0520 Putative deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D DIP0521 Putative isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D DIP1700 glmS; glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DIP0563 Conserved hypothetical protein K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DIP0904 Putative UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DIP1887 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DIP0384 Putative peptidoglycan synthesis related protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DIP0519 Putative epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D DIP0518 Putative regulatory protein sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP1619 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP1404 ppgK; polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D DIP1882 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DIP0862 Putative urydyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DIP2141 Putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DIP1674 Hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D DIP1015 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DIP1014 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D DIP1415 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DIP2203 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DIP0832 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DIP0689 Putative mannose-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DIP0687 Putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DIP0274 Putative mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DIP0682 Putative mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DIP0992 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cdi00620]
D DIP1687 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DIP1639 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP2114 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DIP2054 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DIP2055 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DIP1553 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DIP0649 accBC; acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D DIP1541 Putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DIP2115 Putative aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D DIP1902 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DIP2255 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP0427 Putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP1952 Putative pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D DIP1361 Conserved hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DIP0646 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DIP1787 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DIP1492 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D DIP0938 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DIP1122 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D DIP2180 pckG; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D DIP0266 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cdi00630]
D DIP1787 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DIP0785 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DIP1283 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DIP1057 Putative methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DIP0649 accBC; acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D DIP1272 sbm; Putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DIP1273 Putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DIP0281 cat; Catalase K03781 katE; catalase [EC:1.11.1.6]
D DIP1671 glnA2; glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1644 glnA1; glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP0932 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP1548 Putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DIP1002 odhA; 2-oxoglutarate dehydrogenase, E1 and E2 components K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:cdi00640]
D DIP2054 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DIP2055 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP1811 Putative zinc-binding dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D DIP0649 accBC; acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D DIP0739 pycB; pyruvate carboxylase subunit B K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D DIP0740 mmdA; methylmalonyl-CoA decarboxylase, alpha-subunit K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D DIP0741 Hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D DIP0742 Putative decarboxylase K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D DIP1057 Putative methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DIP1272 sbm; Putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DIP1273 Putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DIP2255 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP0427 Putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cdi00650]
D DIP0371 Putative succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DIP0372 Putative succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DIP0370 Putative succinate dehydrogenease cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DIP0833 Putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DIP2331 Putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DIP1902 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DIP1098 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DIP1099 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DIP0990 Putative decarboxylase (internal pH control related) K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D DIP2135 Putative zinc-binding alcohol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:cdi00660]
D DIP1098 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DIP1099 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DIP0990 Putative decarboxylase (internal pH control related) K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D DIP1127 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DIP1128 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DIP1105 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cdi00562]
D DIP1403 Putative hydrolase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DIP1559 impA; inositol monophosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DIP0115 Conserved hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D DIP1308 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cdi00190]
D DIP1217 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DIP0371 Putative succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DIP0372 Putative succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DIP0370 Putative succinate dehydrogenease cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DIP1625 qcrA; ubiquinol-cytochrome C reductase iron-sulfur protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D DIP1624 qcrB; ubiquinol-cytochrome C reductase cytochrome B subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D DIP1626 qcrC; ubiquinol-cytochrome C reductase cytochrome C subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D DIP1301 Putative farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DIP1628 Putative membrane protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D DIP1627 ctaE; Cytochrome C oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D DIP1864 ctaD; cytochrome C oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D DIP1629 Putative cytochrome C oxidase precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D DIP1300 Putative membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DIP1898 Putative cytochrome ubiquinol oxidase subunit K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DIP1899 Putative cytochrome ubiquinol oxidase subunit K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DIP1050 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DIP1052 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DIP1051 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DIP1049 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DIP1053 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DIP1046 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DIP1048 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DIP1047 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DIP2006 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D DIP0882 Putative RNA polymerase sigma factor K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DIP2016 Conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cdi00680]
D DIP0932 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DIP0917 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DIP1122 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D DIP1787 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DIP2094 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DIP0939 Conserved hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D DIP1088 pfkA; 6-phosphofructokinase I K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DIP2054 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DIP2055 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DIP0389 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DIP1104 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DIP0784 Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DIP1863 Putative hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cdi00910]
D DIP0501 Putative nitrate/nitrite transport system integral membrane protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DIP0502 narK; Putative nitrate/nitrite transport system integral membrane protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DIP0500 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DIP0499 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DIP0497 narI; Putative nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DIP1876 Putative multicopper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D DIP2249 Putative nitric-oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D DIP1547 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DIP1671 glnA2; glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1644 glnA1; glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1979 Putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cdi00920]
D DIP1437 Putative oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D DIP0826 Putative sulfite synthesis related protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DIP1475 Conserved hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D DIP0650 sseA; Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP1270 Putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP2099 Putative sulfultransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP1891 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DIP1890 Putative cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DIP0623 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cdi00061]
D DIP0649 accBC; acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D DIP1692 Putative acyl carrier protein K02078 acpP; acyl carrier protein
D DIP1846 fas; Putative fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D DIP1725 Putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0387 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0386 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cdi00071]
D DIP1725 Putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0387 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0386 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP2114 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cdi00561]
D DIP1548 Putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DIP2334 Putative dihydroxyacetone kinase sununit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D DIP2335 Putative dihydroxyacetone kinase sununit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D DIP2336 Conserved hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D DIP2235 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DIP1178 Conserved hypothetical protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D DIP1618 Putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:cdi00564]
D DIP1130 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DIP2237 glpD; Putative glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DIP1618 Putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DIP2254 Conserved hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D DIP1504 Putative phospholipid biosynthesis K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DIP1386 Putative phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D DIP1458 Putative phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D DIP2048 Putative cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cdi00600]
D DIP0330 Conserved hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D DIP0543 Putative sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:cdi01040]
D DIP0704 Conserved hypothetical protein K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D DIP0703 Putative oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D DIP1379 tesB; Putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cdi00230]
D DIP1882 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DIP0903 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DIP1920 purF; amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DIP1932 purD; Putative phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DIP0838 purN; 5'-phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DIP2057 Putative phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D DIP2130 Putative phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D DIP1919 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DIP0663 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D DIP0664 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DIP1927 purC; Putative phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DIP1928 purB; Putative adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DIP0839 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DIP1369 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DIP1693 Putative N-acetylglucosamine related protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D DIP0271 deoD; purine nucleoside phosphorylase II K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DIP1594 Conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DIP2340 Putative nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D DIP1753 iunH; inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D DIP2003 hpt; Putative hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DIP0581 Conserved hypothetical protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DIP0580 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DIP1783 ndk; Putative nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DIP1850 Ham1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DIP0595 guaA; GMP synthase [glutamine-hydrolysing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DIP1285 Conserved hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DIP1328 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DIP1867 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DIP1865 nrdF1; ribonucleotide reductase beta-chain 1 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DIP1924 nrdF2; ribonucleoside-diphosphate reductase beta chain 2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DIP0465 Conserved hypothetical protein K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DIP1703 Putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D DIP1368 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DIP0920 Conserved hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DIP0332 Putative adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DIP2063 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DIP0638 Conserved hypothetical protein K01488 add; adenosine deaminase [EC:3.5.4.4]
D DIP0541 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DIP1387 Conserved hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:cdi00240]
D DIP1331 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DIP1332 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DIP1334 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DIP1333 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DIP1264 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D DIP2097 pyrE; Phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DIP1330 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DIP1506 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DIP1783 ndk; Putative nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DIP0654 Conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DIP1196 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DIP1693 Putative N-acetylglucosamine related protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D DIP1753 iunH; inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D DIP0642 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D DIP1335 pyrR; pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DIP0465 Conserved hypothetical protein K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DIP2142 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D DIP1867 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DIP1865 nrdF1; ribonucleotide reductase beta-chain 1 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DIP1924 nrdF2; ribonucleoside-diphosphate reductase beta chain 2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DIP0693 Putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DIP1400 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DIP0825 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DIP1465 Conserved hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cdi00250]
D DIP2258 nadB; Putative aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DIP1587 Putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DIP1630 asnB; Putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DIP2136 Putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DIP1254 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D DIP1173 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DIP1174 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DIP2063 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DIP1928 purB; Putative adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DIP1334 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DIP0833 Putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DIP2331 Putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DIP1547 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DIP1671 glnA2; glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1644 glnA1; glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1331 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DIP1332 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DIP1700 glmS; glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DIP1920 purF; amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cdi00260]
D DIP0277 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DIP0279 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DIP1036 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DIP1037 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D DIP1666 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DIP0932 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DIP1548 Putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DIP0389 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DIP1104 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DIP0784 Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DIP1863 Putative hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP2202 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D DIP2200 gbsA; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D DIP1359 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DIP0490 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DIP1579 ilvA; threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DIP2361 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DIP2351 trpB1; tryptophan synthase beta chain TrpB1 K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DIP2360 trpB2; tryptophan synthase beta chain TrpB2 K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cdi00270]
D DIP1891 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DIP1890 Putative cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DIP1736 aecD; beta C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DIP1259 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DIP1325 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DIP2131 Conserved hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D DIP1594 Conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DIP0692 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DIP0277 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DIP0279 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DIP1036 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DIP0623 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D DIP0630 Putative methionine biosynthesis-related protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D DIP1636 ilvE; Putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DIP0650 sseA; Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP1270 Putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP2099 Putative sulfultransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP2255 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP0427 Putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP1787 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DIP1359 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DIP0490 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DIP1104 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DIP0784 Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cdi00280]
D DIP1636 ilvE; Putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP0649 accBC; acyl coenzyme A carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D DIP1057 Putative methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DIP1272 sbm; Putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DIP1273 Putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DIP2079 Putative oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cdi00290]
D DIP1579 ilvA; threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DIP1127 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DIP1128 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DIP1105 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DIP1098 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DIP1099 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DIP1100 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DIP1096 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DIP1636 ilvE; Putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DIP2136 Putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DIP0266 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cdi00300]
D DIP1036 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DIP0277 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DIP0279 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DIP0511 Putative lysine biosynthesis protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DIP1464 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DIP1466 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DIP0979 Putative succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D DIP0981 Putative succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D DIP1170 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DIP0982 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DIP1442 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DIP1035 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DIP1603 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DIP1602 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cdi00310]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP0833 Putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DIP2331 Putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cdi00220]
D DIP1171 argF; ornithine carbamoyltransferase, anabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DIP1173 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DIP1174 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DIP1671 glnA2; glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1644 glnA1; glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1547 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DIP2136 Putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DIP1168 argJ; glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DIP2046 Conserved hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D DIP1169 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DIP1167 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DIP1170 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cdi00330]
D DIP0394 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DIP1777 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DIP1776 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:cdi00340]
D DIP1256 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DIP1257 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D DIP1557 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D DIP1560 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D DIP1561 hisH; amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DIP1558 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DIP1564 hisB; imidazoleglycerol-phosphate dehydrogenase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DIP0178 Putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1681 Putative cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1565 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP0744 Conserved hypothetical protein K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D DIP1566 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cdi00350]
D DIP0178 Putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1681 Putative cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1565 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP2114 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DIP0833 Putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DIP2331 Putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism
D DIP0178 Putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1681 Putative cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1565 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cdi00380]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP0281 cat; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cdi00400]
D DIP1616 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DIP1343 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DIP1342 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DIP1344 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DIP0706 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DIP1345 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DIP2352 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DIP2353 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DIP2354 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DIP1560 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D DIP1555 trpC2; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DIP2355 trpC1; tryptophan biosynthesis protein TrpCF [includes: indole-3-glycerol phosphate synthase] K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D DIP2361 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DIP2351 trpB1; tryptophan synthase beta chain TrpB1 K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DIP2360 trpB2; tryptophan synthase beta chain TrpB2 K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DIP0834 Conserved hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D DIP0245 Putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DIP2246 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D DIP0178 Putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1681 Putative cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1565 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D DIP1993 Conserved hypothetical protein K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DIP2357 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cdi00430]
D DIP2055 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DIP2054 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cdi00450]
D DIP1736 aecD; beta C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DIP1259 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DIP1292 csd; probable cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D DIP2373 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DIP0872 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cdi00460]
D DIP1587 Putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DIP0932 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cdi00470]
D DIP0568 Putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DIP1131 ddl; D-alanine--d-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DIP1853 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DIP1600 Putative UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DIP1442 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DIP1035 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cdi00480]
D DIP2042 Conserved hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D DIP1637 Putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DIP1798 Putative aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DIP0631 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DIP1213 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DIP1304 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DIP1925 Putative glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cdi00515]
D DIP0868 Putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cdi00514]
D DIP0868 Putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cdi00511]
D DIP0330 Conserved hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D DIP0543 Putative sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cdi00542]
D DIP1044 Glycosyl trasferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cdi00541]
D DIP0862 Putative urydyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DIP1415 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DIP2203 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D DIP2141 Putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DIP0360 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DIP0362 rmlB; Putative dTDP-(glucose or rhamnose)-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DIP0361 Putative bifunctional protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D DIP0689 Putative mannose-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DIP0687 Putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DIP0274 Putative mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DIP0904 Putative UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:cdi00550]
D DIP1887 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DIP0384 Putative peptidoglycan synthesis related protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DIP1597 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DIP1600 Putative UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DIP1603 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DIP1131 ddl; D-alanine--d-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DIP1602 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DIP1712 Putative undecaprenyl phosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DIP1262 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DIP2199 Putative conserved integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DIP1601 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DIP1598 murG; UDP-N-acetylglucosamine-N-acetylmuramyl (pentapeptide) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DIP1604 ftsI; Putative penicillin-binding (cell division related) protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DIP0055 pbpA; Putative secreted penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D DIP0637 Putative peptidoglycan synthesis related protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DIP2005 Putative D-Ala D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DIP0263 Conserved hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D DIP0262 Conserved hypothetical protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cdi00552]
D DIP1262 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DIP2199 Putative conserved integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DIP1044 Glycosyl trasferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cdi00543]
D DIP1044 Glycosyl trasferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DIP1891 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cdi00730]
D DIP0029 thiC; thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D DIP0035 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DIP1072 Putative aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DIP0031 thiO; Putative thiamine biosynthesis oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D DIP1397 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DIP0033 thiG; thiazole biosynthesis protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D DIP0030 thiE; Putative thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DIP1133 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D DIP0705 Conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DIP0541 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cdi00740]
D DIP1317 ribA; riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DIP1319 ribD; Putative riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DIP1316 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DIP1318 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DIP1470 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DIP1437 Putative oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
C 00750 Vitamin B6 metabolism [PATH:cdi00750]
D DIP1715 Putative pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D DIP0784 Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DIP1666 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DIP0227 Conserved hypothetical protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D DIP0228 Putative amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cdi00760]
D DIP2258 nadB; Putative aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DIP2257 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D DIP2259 nadC; nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D DIP1858 Conserved hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DIP0271 deoD; purine nucleoside phosphorylase II K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DIP1693 Putative N-acetylglucosamine related protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D DIP1775 Putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DIP0725 Putative hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D DIP1873 nadE; NH3-dependent NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D DIP1457 Putative competence-damage related protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D DIP1181 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D DIP0833 Putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DIP2331 Putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cdi00770]
D DIP1098 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DIP1099 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DIP1100 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DIP1096 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DIP2358 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DIP0950 Putative oxidoreductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DIP1993 Conserved hypothetical protein K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DIP2357 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DIP0931 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D DIP1326 dfp; DNA/pantothenate metabolism flavoprotein homolog K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DIP1139 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DIP1152 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DIP1845 ppt1; Putative phosphopantethiene protein transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D DIP1636 ilvE; Putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:cdi00780]
D DIP1381 Putative biotin synthesis related protein K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D DIP1382 Putative aminotransferase (biotin synthesis related protein) K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DIP1191 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DIP1189 bioD1; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DIP1192 bioD2; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DIP1124 transferase, biotin synthase family K01012 bioB; biotin synthase [EC:2.8.1.6]
D DIP0105 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D DIP0661 Putative biotin synthesis-related regulatory protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cdi00785]
D DIP1640 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D DIP1641 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP1687 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DIP1639 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DIP1002 odhA; 2-oxoglutarate dehydrogenase, E1 and E2 components K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00790 Folate biosynthesis [PATH:cdi00790]
D DIP2001 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DIP1998 Putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D DIP1997 folK; Putative 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DIP1999 Putative dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DIP0984 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DIP1948 Putative dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D DIP0824 Putative folate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DIP1785 Mur ligase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DIP1317 ribA; riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DIP1790 glutamine amidotransferase protein K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D DIP1916 Putative aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D DIP0507 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DIP0505 moaC; molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DIP0506 Putative molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DIP0863 Putative molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cdi00670]
D DIP0824 Putative folate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DIP1253 fhs; formyltetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D DIP0620 folD; methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DIP0932 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DIP0838 purN; 5'-phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DIP0839 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DIP1322 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DIP1259 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DIP0825 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DIP1465 Conserved hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D DIP1611 Putative methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cdi00860]
D DIP0252 Putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1115 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP0400 Putative glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D DIP0409 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DIP0403 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DIP0401 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DIP0407 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D DIP0408 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D DIP1280 Putative ferrochelatase (protoheme biosynthesis) K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D DIP1394 Conserved hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D DIP0402 Putative uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D DIP1484 Putative uroporphyrinogen III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D DIP1153 Putative coenzyme PQQ synthesis related protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D DIP1301 Putative farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DIP1300 Putative membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DIP1233 cobIJ; Putative bifunctional cobalamin biosynthesis protein K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D DIP1231 Conserved hypothetical protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D DIP1235 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D DIP0822 Putative cobalamin synthesis related protein K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D DIP1234 cobK; precorrin-6X reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D DIP1236 Putative precorrin-6Y C5,15-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D DIP1232 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D DIP1488 Putative cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DIP1229 cobN; Putative cobalamin biosynthesis related protein K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D DIP1888 Conserved hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DIP1489 Putative cobalamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DIP1495 cobQ; Putative cobric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D DIP1685 Putative cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DIP1633 cobU; Putative cobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D DIP1635 Putative cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D DIP1634 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D DIP1678 Conserved hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D DIP1669 hmuO; heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D DIP0067 Putative exported multicopper oxidase K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cdi00130]
D DIP0426 menH; Putative ubiquinone/menaquinone biosynthesis methlytransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DIP1114 Putative isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D DIP0423 Putative menaquinone biosynthesis protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D DIP0422 menC; Putative O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D DIP0420 Putative ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D DIP0421 menB; Putative naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D DIP0418 menA; probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cdi00900]
D DIP1397 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DIP1500 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D DIP1973 Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D DIP0876 Putative kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DIP1972 Putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D DIP1498 gcpE; Conserved hypothetical protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DIP0943 lytB; Putative penicillin tolerance protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DIP1730 idi; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D DIP1612 Putative geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DIP0929 Putative undecaprenyl pyrophosphate synthetase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D DIP1712 Putative undecaprenyl phosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DIP1302 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cdi00523]
D DIP0360 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DIP0362 rmlB; Putative dTDP-(glucose or rhamnose)-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DIP0361 Putative bifunctional protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D DIP1114 Putative isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D DIP0362 rmlB; Putative dTDP-(glucose or rhamnose)-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cdi00332]
D DIP1777 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DIP1776 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cdi00261]
D DIP0277 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DIP0279 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DIP0511 Putative lysine biosynthesis protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DIP1464 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DIP1466 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cdi00521]
D DIP0518 Putative regulatory protein sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP1619 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP1882 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DIP0115 Conserved hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D DIP1403 Putative hydrolase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DIP1559 impA; inositol monophosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DIP0360 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DIP0362 rmlB; Putative dTDP-(glucose or rhamnose)-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DIP0361 Putative bifunctional protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D DIP0518 Putative regulatory protein sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D DIP1619 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cdi00525]
D DIP0360 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DIP0362 rmlB; Putative dTDP-(glucose or rhamnose)-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cdi00401]
D DIP0245 Putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DIP0178 Putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1681 Putative cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1565 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D DIP2352 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DIP2353 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D DIP1692 Putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D DIP1325 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D DIP1541 Putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cdi00625]
D DIP2114 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:cdi00633]
D DIP2030 Putative NAD(P)H-dependent reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D DIP0673 Putative uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D DIP0672 Putative uptake hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cdi00626]
D DIP2114 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cdi03020]
D DIP0446 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DIP0447 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DIP0549 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DIP1327 rpoZ; Putative DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D DIP0772 Putative ATP-dependent DNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cdi03010]
D DIP1148 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DIP1508 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DIP0479 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DIP0548 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DIP0527 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DIP2291 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DIP0468 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DIP0524 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DIP0562 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DIP0472 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DIP0547 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DIP0467 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DIP0546 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DIP0849 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DIP1468 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DIP1532 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DIP0482 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DIP0848 rpsR2; 30S ribosomal protein S18-2 K02963 RP-S18; small subunit ribosomal protein S18
D DIP0477 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DIP1766 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DIP0433 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DIP0476 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DIP0473 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DIP0474 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DIP0488 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DIP0525 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DIP0437 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DIP2289 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DIP0436 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DIP0432 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DIP0561 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DIP0486 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DIP0529 rplO; 50s ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DIP0480 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DIP0550 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DIP0526 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DIP1527 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DIP1162 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DIP1781 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DIP0478 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DIP0475 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DIP0487 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DIP0901 Putative 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D DIP1780 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DIP0851 rpmB2; 50S ribosomal protein L28-2 K02902 RP-L28; large subunit ribosomal protein L28
D DIP0481 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DIP0528 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DIP0852 rpmE; 50S ribosomal protein L31 type B-2 K02909 RP-L31; large subunit ribosomal protein L31
D DIP0853 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DIP0850 rpmG; 50S ribosomal protein L33 type 1 K02913 RP-L33; large subunit ribosomal protein L33
D DIP2382 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DIP1161 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DIP1872 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-1 23S_rRNA; possible 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S_rRNA; possible 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cdi00970]
D tRNA-Ala-1 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-4 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-6 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-2 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-1 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-1 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-5 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-3 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-1 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-1 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-2 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-2 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D DIP0252 Putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1115 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1080 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DIP1089 gatB; glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DIP1079 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DIP1350 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DIP1353 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DIP1708 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DIP1388 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DIP2240 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DIP1971 cysS1; Putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DIP0872 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DIP1322 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DIP1786 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DIP2320 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DIP1589 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DIP1987 lysU; Putative lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DIP2138 Putative integral membrane protein/lysyl-tRNA synthetase fusion K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DIP1034 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DIP1482 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DIP1360 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DIP1165 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DIP1166 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DIP1176 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DIP0635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cdi03060]
D DIP0540 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D DIP0430 secE; Putative translocase protein K03073 secE; preprotein translocase subunit SecE
D DIP1307 secG; protein transport/translocation membrane protein K03075 secG; preprotein translocase subunit SecG
D DIP1372 secD; Putative protein export membrane protein K03072 secD; preprotein translocase subunit SecD
D DIP1371 secF; Putative protein export membrane protein K03074 secF; preprotein translocase subunit SecF
D DIP1374 Conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D DIP2273 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP2379 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP0699 secA; Translocase protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DIP1203 secA2; Putative preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DIP1533 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DIP1538 Putative cell division protein K03110 ftsY; fused signal recognition particle receptor
D DIP1242 tatA; Sec-independent twin-arginine translocase system protein K03116 tatA; sec-independent protein translocase protein TatA
D DIP0996 Putative Sec-independent twin-arginine translocase system protein K03117 tatB; sec-independent protein translocase protein TatB
D DIP1241 tatC; Sec-independent twin-arginine translocase system protein K03118 tatC; sec-independent protein translocase protein TatC
D DIP1516 Putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DIP1584 Putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cdi04122]
D DIP1072 Putative aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DIP0650 sseA; Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP1270 Putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP2099 Putative sulfultransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DIP1074 trmU; probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DIP0507 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DIP0492 Putative molybdopterin biosynthesis protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D DIP0034 Putative adenylyltransferase K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D DIP0505 moaC; molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DIP0032 Conserved hypothetical protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
D DIP1248 Putative AAA protein family ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:cdi03018]
D DIP1782 Putative RNA-associated protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DIP0917 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DIP1467 gpsI; guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DIP1018 deaD; DEAD-box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DIP1040 rho; transcription termination factor Rho homolog K03628 rho; transcription termination factor Rho
D DIP1463 Conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DIP2120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DIP2020 groEL2; Chaperonin GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP0576 groEL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP0882 Putative RNA polymerase sigma factor K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DIP2016 Conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DIP2368 Putative tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cdi03030]
D DIP1573 Putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP0264 Putative helicase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP1076 Putative DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP1580 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DIP0259 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DIP0333 Putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DIP1769 Conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DIP0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DIP2288 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DIP1699 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DIP2290 ssb1; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1804 Putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DIP2216 ssb2; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1678 Conserved hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D DIP1515 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DIP1146 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DIP1077 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cdi03410]
D DIP0304 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DIP1134 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DIP1980 Putative DNA repair protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DIP1543 Putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DIP2304 Putative DNA repair glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DIP0829 Putative endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D DIP0134 Putative DNA-repair protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DIP0828 Putative DNA repair protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D DIP2047 Putative exonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DIP0633 Putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DIP1146 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DIP1077 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cdi03420]
D DIP0911 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DIP2031 uvrA2; Putative excinuclease ABC subunit A2 K03701 uvrA; excinuclease ABC subunit A
D DIP1159 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DIP1154 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D DIP1314 uvrC; Putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D DIP0835 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP0726 uvrD; Putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP0723 Putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP1146 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DIP1077 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DIP0772 Putative ATP-dependent DNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cdi03430]
D DIP0835 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP0726 uvrD; Putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP0723 Putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP0942 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DIP0941 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DIP2290 ssb1; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1804 Putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DIP2216 ssb2; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1580 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DIP0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DIP0259 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DIP1769 Conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DIP0333 Putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DIP1573 Putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP0264 Putative helicase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP1076 Putative DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP1077 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cdi03440]
D DIP2290 ssb1; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1804 Putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DIP2216 ssb2; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP0003 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D DIP1713 Putative DNA-repair related protein K03584 recO; DNA repair protein RecO (recombination protein O)
D DIP0261 recR; recombination protein K06187 recR; recombination protein RecR
D DIP1450 recA; Recombinase A K03553 recA; recombination protein RecA
D DIP1146 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DIP1376 ruvA; holliday junction DNA-helicase K03550 ruvA; holliday junction DNA helicase RuvA
D DIP1375 ruvB; holliday junction DNA-helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DIP1377 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DIP1136 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DIP2311 Conserved hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DIP2300 Putative DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DIP1580 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DIP0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DIP0259 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DIP1769 Conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DIP0333 Putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DIP1573 Putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP0264 Putative helicase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP1076 Putative DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP1324 Putative primosomal protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cdi03250]
D DIP0025 ppiA; probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cdi02010]
D DIP0496 Putative molybdate binding protein (partial) K02020 modA; molybdate transport system substrate-binding protein
D DIP0495 Putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DIP0284 Putative ABC-transport system iron-binding secreted protein K02012 afuA; iron(III) transport system substrate-binding protein
D DIP0283 Putative transport system permease (iron) K02011 afuB; iron(III) transport system permease protein
D DIP0282 Putative ABC transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DIP0157 Putative secreted protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D DIP0096 opuBD; choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D DIP0095 opuBB; choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D DIP0097 opuBA; choline transport system ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D DIP0539 Putative sugar ABC transport syste ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DIP0534 Putative sugar-binding secreted protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D DIP0535 Putative sugar ABC transport system membrane protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DIP0536 Putative sugar ABC transport system membrane protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DIP1910 Putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D DIP1909 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D DIP1908 pstA; phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D DIP0610 Putative ABC transport system secreted protein K02073 metQ; D-methionine transport system substrate-binding protein
D DIP0611 Putative ABC transport system secreted protein K02073 metQ; D-methionine transport system substrate-binding protein
D DIP0608 Putative ABC transport system membrane protein K02072 metI; D-methionine transport system permease protein
D DIP0609 Putative ABC transport system ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D DIP0956 Putative peptide transport system secreted protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DIP0957 Putative peptide transport system membrane protein K15581 oppB; oligopeptide transport system permease protein
D DIP0958 Putative peptide transport system membrane protein K15582 oppC; oligopeptide transport system permease protein
D DIP0959 Putative peptide ABC transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DIP1062 Putative iron-siderophore uptake system exported solute-binding component K25286 fagD; iron-siderophore transport system substrate-binding protein
D DIP1061 Putative iron-siderophore uptake system transmembrane component K23186 fepD; iron-siderophore transport system permease protein
D DIP1060 Putative iron-siderophore uptake system transmembrane component K23187 fepG; iron-siderophore transport system permease protein
D DIP1059 Putative iron-siderophore uptake system ATP-binding component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D DIP0169 Putative secreted protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D DIP0173 Putative membrane protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D DIP0171 Putative membrane protein K11708 troC; manganese/zinc/iron transport system permease protein
D DIP0172 Putative membrane protein K11709 troD; manganese/zinc/iron transport system permease protein
D DIP0170 Putative membrane protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D DIP1452 Putative membrane protein K03523 bioY; biotin transport system substrate-specific component
D DIP1454 Putative membrane protein K16783 bioN; biotin transport system permease protein
D DIP1453 Putative ABC transport system, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D DIP0954 Putative ABC transport system membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D DIP2342 Putative integral membrane transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D DIP0175 Putative ABC transport system, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DIP0174 Putative ABC transport system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DIP2324 Putative ABC transport system integral membrane protein K09813 hrtB; hemin transport system permease protein
D DIP2323 Putative ABC transport system, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D DIP0089 Putative membrane protein K20491 nisE; lantibiotic transport system permease protein
D DIP0090 ABC transport system ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D DIP0749 Putative cell division protein K09811 ftsX; cell division transport system permease protein
D DIP0748 ftsE; Cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D DIP2159 ABC transport protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DIP2158 ABC transport protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DIP1901 Putative ABC transport system ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D DIP1900 Putative ABC transport system ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:cdi02060]
D DIP1428 ptsI; phosphoenolpyruvate:sugar phosphotransferase system enzyme I (PTS system) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DIP1435 Putative carbohydrate carrier protein (PTS system) K02784 ptsH; phosphocarrier protein HPr
D DIP1151 ptsG; PTS system, glucose-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D DIP2333 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D DIP1430 Putative phosphofructokinase (PTS system) K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cdi03070]
D DIP1372 secD; Putative protein export membrane protein K03072 secD; preprotein translocase subunit SecD
D DIP1371 secF; Putative protein export membrane protein K03074 secF; preprotein translocase subunit SecF
D DIP0430 secE; Putative translocase protein K03073 secE; preprotein translocase subunit SecE
D DIP1307 secG; protein transport/translocation membrane protein K03075 secG; preprotein translocase subunit SecG
D DIP0540 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D DIP1374 Conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D DIP2273 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP2379 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP0699 secA; Translocase protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DIP1203 secA2; Putative preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DIP1538 Putative cell division protein K03110 ftsY; fused signal recognition particle receptor
D DIP1533 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DIP1242 tatA; Sec-independent twin-arginine translocase system protein K03116 tatA; sec-independent protein translocase protein TatA
D DIP0996 Putative Sec-independent twin-arginine translocase system protein K03117 tatB; sec-independent protein translocase protein TatB
D DIP1241 tatC; Sec-independent twin-arginine translocase system protein K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cdi02020]
D DIP0390 Putative two component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D DIP0391 regX3; Putative two component system response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D DIP1910 Putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D DIP1300 Putative membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DIP0855 Putative two component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D DIP0854 Putative two component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D DIP0856 Putative serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D DIP0695 mtrB; Putative two component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D DIP0694 mtrA2; Putative two component system response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D DIP0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DIP0090 ABC transport system ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D DIP0089 Putative membrane protein K20491 nisE; lantibiotic transport system permease protein
D DIP0845 Putative citrate lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D DIP1198 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D DIP0500 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DIP0499 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DIP0497 narI; Putative nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DIP0498 Putative nitrate reductase delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D DIP2270 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D DIP0313 Conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DIP0314 Putative membrane protein K12510 tadB; tight adherence protein B
D DIP1534 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D DIP1535 glnB; Nitrogen regulatory protein K04751 glnB; nitrogen regulatory protein P-II 1
D DIP1671 glnA2; glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1644 glnA1; glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP0672 Putative uptake hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D DIP0673 Putative uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D DIP0303 Putative transcription regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DIP1898 Putative cytochrome ubiquinol oxidase subunit K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DIP1899 Putative cytochrome ubiquinol oxidase subunit K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DIP1683 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cdi02024]
D DIP2352 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DIP2353 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DIP1616 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DIP1725 Putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0387 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0386 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0303 Putative transcription regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DIP1319 ribD; Putative riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DIP0956 Putative peptide transport system secreted protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DIP0957 Putative peptide transport system membrane protein K15581 oppB; oligopeptide transport system permease protein
D DIP0958 Putative peptide transport system membrane protein K15582 oppC; oligopeptide transport system permease protein
D DIP0959 Putative peptide ABC transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DIP1740 Putative ABC transport system solute-binding secreted protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP2162 Putative ABC transport system, solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP1370 Conserved hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP0324 Putative secreted protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP2128 Putative substrate-binding transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP1741 Putative oligopeptide ABC transport system membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP0514 Putative oligopeptide transport system integral membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP2163 Putative ABC transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP2127 Putative binding-protein-dependent integral membrane transport protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP0325 Putative transport system membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP1742 Putative oligopeptide ABC transport system membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DIP2164 Putative ABC transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DIP2126 Putative binding-protein-dependent integral membrane transport protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DIP0513 Putative oligopeptide transport system (integral membrane and ATP-binding proteins) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DIP1743 Putative ABC transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DIP2165 Putative ABC transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DIP0512 Putative oligopeptide transport system ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DIP2125 Putative ABC transport system, ATP-binding subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DIP2273 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP2379 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP0430 secE; Putative translocase protein K03073 secE; preprotein translocase subunit SecE
D DIP1307 secG; protein transport/translocation membrane protein K03075 secG; preprotein translocase subunit SecG
D DIP0540 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D DIP1374 Conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D DIP0699 secA; Translocase protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DIP1203 secA2; Putative preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DIP1538 Putative cell division protein K03110 ftsY; fused signal recognition particle receptor
D DIP1533 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DIP0090 ABC transport system ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D DIP0089 Putative membrane protein K20491 nisE; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D DIP1406 sigA; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DIP0917 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cdi04980]
D DIP1888 Conserved hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DIP1271 Putative kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D DIP1272 sbm; Putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DIP1273 Putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DIP1259 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cdi01501]
D DIP2172 Putative secreted glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DIP0956 Putative peptide transport system secreted protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DIP0957 Putative peptide transport system membrane protein K15581 oppB; oligopeptide transport system permease protein
D DIP0958 Putative peptide transport system membrane protein K15582 oppC; oligopeptide transport system permease protein
D DIP0959 Putative peptide ABC transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DIP1604 ftsI; Putative penicillin-binding (cell division related) protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cdi01502]
D DIP1131 ddl; D-alanine--d-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DIP0568 Putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DIP1602 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DIP1601 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DIP1598 murG; UDP-N-acetylglucosamine-N-acetylmuramyl (pentapeptide) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cdi01503]
D DIP2375 Putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DIP0025 ppiA; probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cdi01000]
C 01001 Protein kinases [BR:cdi01001]
D DIP2053 Putative protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D DIP0053 pknB; probable serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DIP1615 Putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DIP0054 pknA; probable serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DIP0390 Putative two component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D DIP0855 Putative two component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D DIP0695 mtrB; Putative two component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D DIP1935 Putative two somponent system sensor kinase protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cdi01009]
D DIP0692 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DIP0057 Putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D DIP1863 Putative hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cdi01002]
D DIP1584 Putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DIP0675 Putative hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D DIP0595 guaA; GMP synthase [glutamine-hydrolysing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DIP1285 Conserved hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DIP1621 Putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D DIP1281 Putative invasion protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D DIP1920 purF; amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DIP1700 glmS; glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DIP1630 asnB; Putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DIP2032 Putative protease K05520 yhbO; deglycase [EC:3.5.1.124]
D DIP0236 Putative fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D DIP2012 Putative fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D DIP2225 Putative fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D DIP2248 Putative conserved integral membrane protein K07052 K07052; CAAX protease family protein
D DIP1798 Putative aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DIP1728 Putative peptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D DIP0154 Putative endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D DIP1637 Putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DIP0982 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DIP2037 Putative peptidase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D DIP0542 mapA; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DIP1496 mapB; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DIP2002 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DIP0156 Putative membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D DIP0856 Putative serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D DIP0364 Putative prolyl oligopeptidase family protein K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D DIP1926 Putative prolyl oligopeptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D DIP0637 Putative peptidoglycan synthesis related protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DIP2005 Putative D-Ala D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DIP1791 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DIP1792 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DIP0730 Putative secreted protein K07177 K07177; Lon-like protease
D DIP1426 lexA; transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D DIP1516 Putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DIP0204 Putative phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
C 01003 Glycosyltransferases [BR:cdi01003]
D DIP1226 ppm1; Putative polyprenol phosphate mannosyl transferase 1 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D DIP0868 Putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D DIP1384 Putative transferase (LPS related) K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D DIP1620 Conserved hypothetical protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D DIP0425 Putative glycosyl transferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D DIP0991 Putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D DIP1044 Glycosyl trasferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DIP2263 Conserved putative integral membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D DIP1613 Putative membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D DIP1297 Putative membrane protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D DIP0159 Putative transferase K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D DIP0160 Putative membrane protein K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D DIP2195 Conserved putative integral membrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D DIP1690 Putative membrane protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D DIP2174 Conserved putative integral membrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D DIP0168 Putative glycosyl transferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D DIP2198 Conserved hypothetical protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D DIP0681 Putative glycosyl transferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D DIP1966 Putative glycosyltransferase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D DIP0985 Conserved hypothetical protein K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cdi01005]
D DIP1044 Glycosyl trasferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cdi01011]
D DIP1887 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DIP0384 Putative peptidoglycan synthesis related protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DIP1597 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DIP1600 Putative UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DIP1603 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DIP1131 ddl; D-alanine--d-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DIP0568 Putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DIP1853 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DIP1601 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DIP1598 murG; UDP-N-acetylglucosamine-N-acetylmuramyl (pentapeptide) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DIP1262 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DIP2199 Putative conserved integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DIP2371 Putative conserved integral membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D DIP1604 ftsI; Putative penicillin-binding (cell division related) protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DIP0055 pbpA; Putative secreted penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D DIP0637 Putative peptidoglycan synthesis related protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DIP2005 Putative D-Ala D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DIP1621 Putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D DIP1281 Putative invasion protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D DIP0236 Putative fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D DIP2012 Putative fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D DIP2225 Putative fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D DIP1348 Putative secreted protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DIP2375 Putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cdi01004]
D DIP1846 fas; Putative fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D DIP1379 tesB; Putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D DIP0704 Conserved hypothetical protein K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D DIP2189 Putative polyketide synthase K12437 pks13; polyketide synthase 13
D DIP1725 Putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0387 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0386 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP2190 Putative polyketide synthase subunit K12428 fadD32; fatty acid CoA ligase FadD32
D DIP1618 Putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cdi01006]
D DIP1612 Putative geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DIP0929 Putative undecaprenyl pyrophosphate synthetase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D DIP1712 Putative undecaprenyl phosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DIP1443 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DIP0418 menA; probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D DIP1301 Putative farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DIP2196 Conserved putative integral membrane protein K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:cdi01007]
D DIP0252 Putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1115 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1176 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DIP0635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DIP1971 cysS1; Putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DIP1034 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DIP0872 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DIP1589 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DIP1786 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DIP2320 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DIP1987 lysU; Putative lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DIP2138 Putative integral membrane protein/lysyl-tRNA synthetase fusion K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DIP1353 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DIP1360 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DIP1708 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DIP2240 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DIP1482 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DIP1388 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DIP1350 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DIP1165 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DIP1166 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DIP2136 Putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DIP0178 Putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1681 Putative cobalamin-biosynthesis related aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1565 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DIP1382 Putative aminotransferase (biotin synthesis related protein) K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DIP1736 aecD; beta C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DIP1170 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DIP1191 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DIP0409 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DIP1636 ilvE; Putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DIP0784 Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cdi00194]
D DIP1053 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DIP1052 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DIP1051 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DIP1050 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DIP1049 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DIP1048 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DIP1047 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DIP1046 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cdi03000]
D DIP1421 Putative transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D DIP1092 lysG; lysine export transcriptional regulatory protein LysG K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D DIP1427 Putative sugar related operon transcriptional regulator (PTS system) K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D DIP1429 Putative sugar related operon transcriptional regulator (PTS system) K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D DIP2241 Putative GntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D DIP0226 Putative GntR-family regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DIP1571 Putative tetR-family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D DIP1284 Putative TetR-famlily transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D DIP1889 Putative transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D DIP2117 hspR; Putative chaperone locus transcriptional regulator, HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D DIP1710 Putative ferric uptake regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DIP0303 Putative transcription regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DIP0415 Putative ArsR family regulatory protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DIP0369 Putative regulatory protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D DIP1456 Putative DNA-binding protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D DIP2147 Conserved hypothetical protein K10947 K10947; PadR family transcriptional regulator
D DIP1414 dtxR; diphtheria toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D DIP0619 Putative diphtheria toxin repressor 2 K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D DIP0661 Putative biotin synthesis-related regulatory protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DIP0086 Putative regulatory protein K07729 K07729; putative transcriptional regulator
D DIP1150 Putative transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D DIP0684 Putative regulatory protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D DIP0299 Putative regulatory protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D DIP0712 Putative transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D DIP2376 parB; Putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DIP1974 Putative CarD-like transcriptional factor K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D DIP1172 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D DIP1721 hrcA; Putative heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D DIP0267 Putative regulatory protein K05346 deoR; deoxyribonucleoside regulator
D DIP1335 pyrR; pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DIP2367 Conserved hypothetical protein K07735 algH; putative transcriptional regulator
D DIP1424 Conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D DIP1607 Conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cdi03021]
D DIP0772 Putative ATP-dependent DNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D DIP0549 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DIP0446 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DIP0447 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DIP1327 rpoZ; Putative DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DIP1406 sigA; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D DIP1413 sigB; RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D DIP0577 Putative RNA-polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DIP0709 rpoE; RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DIP0994 Putative ECF family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DIP0099 Putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DIP0280 sigC; Putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DIP2372 Putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DIP0880 Putative RNA polymerase sigma factor (ECF family) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DIP1479 Putative N utilization related protein K02600 nusA; transcription termination/antitermination protein NusA
D DIP1339 Putative transcription termination related protein K03625 nusB; transcription antitermination protein NusB
D DIP0431 nusG; Putative transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D DIP0925 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D DIP1040 rho; transcription termination factor Rho homolog K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cdi03019]
D DIP1782 Putative RNA-associated protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DIP1544 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DIP1463 Conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DIP1813 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D DIP1018 deaD; DEAD-box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DIP0917 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DIP1467 gpsI; guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DIP1040 rho; transcription termination factor Rho homolog K03628 rho; transcription termination factor Rho
D DIP2120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DIP2020 groEL2; Chaperonin GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP0576 groEL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP0882 Putative RNA polymerase sigma factor K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DIP2016 Conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DIP2368 Putative tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D DIP1313 Conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D DIP1239 Putative helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:3.6.4.-]
D DIP1423 Putative ATP-dependent helicase K03578 hrpA; ATP-dependent helicase HrpA [EC:5.6.2.6]
D DIP0131 Putative ATP-dependent helicase K03579 hrpB; ATP-dependent helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cdi03011]
D DIP1148 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DIP1508 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DIP0479 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DIP0548 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DIP0527 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DIP2291 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DIP0468 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DIP0524 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DIP0562 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DIP0472 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DIP0547 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DIP0467 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DIP0546 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DIP0849 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DIP1468 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DIP1532 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DIP0482 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DIP0848 rpsR2; 30S ribosomal protein S18-2 K02963 RP-S18; small subunit ribosomal protein S18
D DIP0477 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DIP1766 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DIP0433 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DIP0476 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DIP0473 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DIP0474 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DIP0488 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DIP0525 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DIP2289 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DIP0436 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DIP0432 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DIP0437 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DIP0561 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DIP0486 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DIP0529 rplO; 50s ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DIP0480 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DIP0550 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DIP0526 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DIP1527 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DIP1162 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DIP1781 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DIP0478 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DIP0475 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DIP0487 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DIP1780 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DIP0851 rpmB2; 50S ribosomal protein L28-2 K02902 RP-L28; large subunit ribosomal protein L28
D DIP0481 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DIP0528 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DIP0852 rpmE; 50S ribosomal protein L31 type B-2 K02909 RP-L31; large subunit ribosomal protein L31
D DIP0853 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DIP0850 rpmG; 50S ribosomal protein L33 type 1 K02913 RP-L33; large subunit ribosomal protein L33
D DIP2382 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DIP1161 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DIP1872 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DIP0901 Putative 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-1 23S_rRNA; possible 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S_rRNA; possible 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cdi03009]
D DIP1544 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DIP1813 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D DIP1714 era; Putative GTP-binding protein K03595 era; GTPase
D DIP1779 GTP1/OBG-family GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D DIP1479 Putative N utilization related protein K02600 nusA; transcription termination/antitermination protein NusA
D DIP1339 Putative transcription termination related protein K03625 nusB; transcription antitermination protein NusB
D DIP0431 nusG; Putative transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D DIP0875 Putative dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DIP1321 Conserved hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DIP1138 Putative DNA methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DIP1719 Conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DIP2378 Conserved hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DIP1606 Conserved hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DIP0871 Conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DIP1180 Putative cytotoxin/hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D DIP0988 Putative macrolide resistance protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D DIP1970 SpoU rRNA Methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DIP1502 Conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DIP2277 Conserved hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DIP1195 Putative pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DIP1583 rluC; Putative pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DIP0573 Putative ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DIP1531 rimM; Putative 16s rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D DIP1782 Putative RNA-associated protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DIP1349 Conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DIP1018 deaD; DEAD-box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DIP0705 Conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DIP1197 engA; Putative GTP-binding protein K03977 engA; GTPase
D DIP1439 Putative GTP-binding protein K03665 hflX; GTPase
D DIP1043 Conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DIP1368 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DIP1476 rbfA; Putative ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D DIP1480 Conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D DIP0149 Conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D DIP1774 Conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D DIP1717 Conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D DIP0948 Putative ABC transport system ATP-binding protein K06942 ychF; ribosome-binding ATPase
D DIP1545 Conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cdi03016]
D DIP2025 Conserved hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D DIP0252 Putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1115 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1482 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DIP1589 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DIP2320 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DIP0872 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DIP1034 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DIP1987 lysU; Putative lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DIP2138 Putative integral membrane protein/lysyl-tRNA synthetase fusion K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DIP1353 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DIP1350 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DIP1708 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DIP1388 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DIP2240 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DIP1971 cysS1; Putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DIP1786 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DIP1360 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DIP1165 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DIP1166 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DIP1176 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DIP0635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DIP1412 Conserved hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DIP1249 Conserved hypothetical protein K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D DIP2181 Conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D DIP0551 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DIP1471 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DIP1072 Putative aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DIP1043 Conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DIP1443 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DIP0826 Putative sulfite synthesis related protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DIP2381 rnpA; Putative ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DIP1851 rph; Putative ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D DIP1396 Putative ribonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D DIP0708 Putative secreted protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D DIP0247 Putative cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DIP1448 Conserved hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DIP1530 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DIP1240 Putative tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DIP1164 tsnR; Putative rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D DIP2277 Conserved hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DIP1074 trmU; probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DIP1917 Conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D DIP0251 Putative tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DIP2004 Conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DIP0572 Conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DIP0574 Putative endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DIP0569 Conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DIP1467 gpsI; guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cdi03012]
D DIP1477 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DIP1160 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DIP1507 tsf; elongation factor TS K02357 tsf; elongation factor Ts
D DIP0470 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D DIP0469 fusA; elongation factor G K02355 fusA; elongation factor G
D DIP1041 prfA; peptide chain release factor 1 (RF-1) K02835 prfA; peptide chain release factor 1
D DIP1505 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D DIP1042 HemK-family methytransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DIP0897 Putative peptidyl tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DIP0900 Putative peptidyl tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DIP0545 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DIP1340 efp; elongation factor P K02356 efp; elongation factor P
D DIP0746 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D DIP0895 Putative peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cdi03110]
D DIP2104 clpB; Putative ATP-dependent protease regulatory subunit, ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DIP1983 clpC; ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D DIP1789 Putative ATPase K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DIP2120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DIP2020 groEL2; Chaperonin GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP0576 groEL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP1720 dnaJ2; chaperone protein 2 K03686 dnaJ; molecular chaperone DnaJ
D DIP2118 dnaJ1; chaperone protein cofactor 1 K03686 dnaJ; molecular chaperone DnaJ
D DIP2119 grpE; chaperone protein cofactor GrpE K03687 GRPE; molecular chaperone GrpE
D DIP1576 Putative RNA-binding heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D DIP0575 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D DIP2002 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DIP1046 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DIP1390 Putative secreted protein K09796 pccA; periplasmic copper chaperone A
D DIP0676 Putative hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D DIP0670 Putative hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D DIP0671 Putative hydrogenase nickel incorporation protein K04652 hypB; hydrogenase nickel incorporation protein HypB
D DIP0025 ppiA; probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DIP1363 Putative isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DIP2374 trxA; thioredoxin K03671 TXN; thioredoxin
D DIP2284 Putative thioredoxin K03671 TXN; thioredoxin
D DIP1064 Putative thioredoxin-like protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:cdi04131]
D DIP1783 ndk; Putative nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DIP0892 Putative glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DIP1310 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DIP0389 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DIP1553 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:cdi04121]
D DIP1246 Conserved hypothetical protein K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cdi03051]
D DIP1248 Putative AAA protein family ATPase K13527 mpa; proteasome-associated ATPase
D DIP1245 Conserved hypothetical protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D DIP1244 Conserved hypothetical protein K13572 pafB; proteasome accessory factor B
D DIP1243 Conserved hypothetical protein K13573 pafC; proteasome accessory factor C
D DIP1247 Conserved hypothetical protein K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cdi03032]
D DIP0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DIP2288 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DIP1699 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DIP2290 ssb1; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1804 Putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DIP2216 ssb2; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1580 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DIP0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DIP1769 Conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DIP0333 Putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DIP1573 Putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP0264 Putative helicase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP1076 Putative DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP0259 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DIP1678 Conserved hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D DIP1515 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DIP1146 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DIP1077 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DIP0009 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DIP0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DIP0327 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cdi03036]
D DIP1544 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DIP2266 Conserved hypothetical protein K26249 lsr2; nucleoid-associated protein Lsr2
D DIP0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DIP2303 Putative DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D DIP1092 lysG; lysine export transcriptional regulatory protein LysG K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D DIP1540 Putative chromosome partition protein K03529 smc; chromosome segregation protein
D DIP1188 Conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D DIP1194 Conserved hypothetical protein K06024 scpB; segregation and condensation protein B
D DIP0918 Putative membrane protein K05589 ftsB; cell division protein FtsB
D DIP0748 ftsE; Cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D DIP1604 ftsI; Putative penicillin-binding (cell division related) protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DIP1461 Putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DIP1596 Putative cell division protein precursor K03589 ftsQ; cell division protein FtsQ
D DIP1599 Putative cell division protein K03588 ftsW; cell division protein FtsW
D DIP0749 Putative cell division protein K09811 ftsX; cell division transport system permease protein
D DIP1595 ftsZ; Cell division protein K03531 ftsZ; cell division protein FtsZ
D DIP2375 Putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DIP1593 Conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D DIP2377 parA; Putative chromosome partitioning protein K03496 parA; chromosome partitioning protein
D DIP1187 Putative regulatory protein K03496 parA; chromosome partitioning protein
D DIP2376 parB; Putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DIP2378 Conserved hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DIP1510 Putative integrase/recombinase K03733 xerC; integrase/recombinase XerC
D DIP1186 xerD; integrase/recombinase K04763 xerD; integrase/recombinase XerD
D DIP0997 Putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DIP0348 Conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DIP1311 Conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cdi03400]
D DIP1487 Putative DNA repair related protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DIP0113 Putative riboflavin biosynthesis protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D DIP1134 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DIP1980 Putative DNA repair protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DIP0304 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DIP0772 Putative ATP-dependent DNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D DIP1017 Putative NUDIX-family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DIP1400 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DIP0349 Putative alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D DIP0133 Putative DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D DIP0828 Putative DNA repair protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D DIP0134 Putative DNA-repair protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DIP1543 Putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DIP2304 Putative DNA repair glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DIP0829 Putative endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D DIP2047 Putative exonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DIP0633 Putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DIP1077 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DIP1146 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DIP2031 uvrA2; Putative excinuclease ABC subunit A2 K03701 uvrA; excinuclease ABC subunit A
D DIP1159 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DIP1154 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D DIP1314 uvrC; Putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D DIP0835 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP0726 uvrD; Putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP0723 Putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DIP0446 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DIP0447 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DIP0549 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DIP1327 rpoZ; Putative DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DIP0911 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DIP0942 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DIP0941 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DIP1580 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DIP0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DIP1769 Conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DIP0333 Putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DIP1573 Putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP0264 Putative helicase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP1076 Putative DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DIP0259 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DIP2290 ssb1; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1804 Putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DIP2216 ssb2; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1450 recA; Recombinase A K03553 recA; recombination protein RecA
D DIP1376 ruvA; holliday junction DNA-helicase K03550 ruvA; holliday junction DNA helicase RuvA
D DIP1375 ruvB; holliday junction DNA-helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DIP1377 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DIP1324 Putative primosomal protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DIP1977 Conserved hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D DIP0003 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D DIP1136 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DIP2311 Conserved hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DIP2300 Putative DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DIP1713 Putative DNA-repair related protein K03584 recO; DNA repair protein RecO (recombination protein O)
D DIP0261 recR; recombination protein K06187 recR; recombination protein RecR
D DIP1182 recN; DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D DIP0037 Conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D DIP2214 Conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D DIP0009 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DIP0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DIP0327 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DIP1588 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DIP1426 lexA; transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D DIP0604 Conserved hypothetical protein K14161 imuB; protein ImuB
D DIP0612 Putative DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D DIP1449 Putative regulatory protein K03565 recX; regulatory protein
D DIP1859 DeaD/DeaH family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D DIP0827 Putative ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D DIP1129 Conserved hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D DIP1185 Conserved hypothetical protein K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D DIP1867 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DIP1865 nrdF1; ribonucleotide reductase beta-chain 1 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DIP1924 nrdF2; ribonucleoside-diphosphate reductase beta chain 2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DIP1475 Conserved hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cdi03029]
D DIP1477 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DIP1160 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DIP1507 tsf; elongation factor TS K02357 tsf; elongation factor Ts
D DIP0470 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D DIP0469 fusA; elongation factor G K02355 fusA; elongation factor G
D DIP1714 era; Putative GTP-binding protein K03595 era; GTPase
D DIP1176 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DIP2320 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DIP1353 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DIP1708 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DIP1034 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DIP1080 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DIP1089 gatB; glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DIP1079 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DIP2290 ssb1; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP1804 Putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D DIP2216 ssb2; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DIP2120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DIP2119 grpE; chaperone protein cofactor GrpE K03687 GRPE; molecular chaperone GrpE
D DIP2020 groEL2; Chaperonin GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP0576 groEL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP0575 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D DIP1720 dnaJ2; chaperone protein 2 K03686 dnaJ; molecular chaperone DnaJ
D DIP2118 dnaJ1; chaperone protein cofactor 1 K03686 dnaJ; molecular chaperone DnaJ
D DIP1072 Putative aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DIP0997 Putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DIP1301 Putative farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DIP1300 Putative membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DIP2273 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP2379 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cdi02000]
D DIP2159 ABC transport protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DIP2158 ABC transport protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DIP0015 Putative transport system, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DIP0909 Putative ABC transport system ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DIP1735 Putative ABC transport system ATP-binding membrane protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DIP1003 Putative ABC transport system, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DIP1901 Putative ABC transport system ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D DIP1900 Putative ABC transport system ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D DIP0877 Putative ABC transport system ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D DIP0908 Putative ABC transport system membrane protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D DIP0496 Putative molybdate binding protein (partial) K02020 modA; molybdate transport system substrate-binding protein
D DIP0495 Putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DIP0284 Putative ABC-transport system iron-binding secreted protein K02012 afuA; iron(III) transport system substrate-binding protein
D DIP0283 Putative transport system permease (iron) K02011 afuB; iron(III) transport system permease protein
D DIP0282 Putative ABC transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DIP0157 Putative secreted protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D DIP0096 opuBD; choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D DIP0095 opuBB; choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D DIP0097 opuBA; choline transport system ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D DIP0539 Putative sugar ABC transport syste ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DIP0534 Putative sugar-binding secreted protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D DIP0535 Putative sugar ABC transport system membrane protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DIP0536 Putative sugar ABC transport system membrane protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D DIP0021 Putative solute-binding lipoprotein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D DIP0022 Putative ABC transport protein, membrane component K02057 ABC.SS.P; simple sugar transport system permease protein
D DIP0023 Putative ABC transport protein, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DIP1910 Putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D DIP1909 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D DIP1908 pstA; phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D DIP0610 Putative ABC transport system secreted protein K02073 metQ; D-methionine transport system substrate-binding protein
D DIP0611 Putative ABC transport system secreted protein K02073 metQ; D-methionine transport system substrate-binding protein
D DIP0608 Putative ABC transport system membrane protein K02072 metI; D-methionine transport system permease protein
D DIP0609 Putative ABC transport system ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D DIP2052 Putative ABC transpoter membrane protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DIP1144 Putative secreted protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DIP1143 Putative ABC transport system membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D DIP1142 atrC; Putative ABC transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DIP0956 Putative peptide transport system secreted protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DIP0957 Putative peptide transport system membrane protein K15581 oppB; oligopeptide transport system permease protein
D DIP0958 Putative peptide transport system membrane protein K15582 oppC; oligopeptide transport system permease protein
D DIP0959 Putative peptide ABC transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DIP1740 Putative ABC transport system solute-binding secreted protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP2162 Putative ABC transport system, solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP1370 Conserved hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP0324 Putative secreted protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP2128 Putative substrate-binding transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DIP1741 Putative oligopeptide ABC transport system membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP0514 Putative oligopeptide transport system integral membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP2163 Putative ABC transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP2127 Putative binding-protein-dependent integral membrane transport protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP0325 Putative transport system membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DIP1742 Putative oligopeptide ABC transport system membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DIP2164 Putative ABC transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DIP2126 Putative binding-protein-dependent integral membrane transport protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DIP0513 Putative oligopeptide transport system (integral membrane and ATP-binding proteins) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DIP1743 Putative ABC transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DIP2165 Putative ABC transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DIP0512 Putative oligopeptide transport system ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DIP2125 Putative ABC transport system, ATP-binding subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DIP0626 hmuT; Iron-related transport system receptor precursor protein K25132 hmuT; heme transport system substrate-binding protein
D DIP0627 hmuU; Iron-related transport system membrane protein K25133 hmuU; heme transport system permease protein
D DIP0628 hmuV; Iron-related transport system ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D DIP1062 Putative iron-siderophore uptake system exported solute-binding component K25286 fagD; iron-siderophore transport system substrate-binding protein
D DIP1061 Putative iron-siderophore uptake system transmembrane component K23186 fepD; iron-siderophore transport system permease protein
D DIP1060 Putative iron-siderophore uptake system transmembrane component K23187 fepG; iron-siderophore transport system permease protein
D DIP1059 Putative iron-siderophore uptake system ATP-binding component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D DIP0582 Putative iron transport system binding (secreted) protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DIP1086 Putative iron transport system exported solute-binding component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DIP0108 irp6A; Ferrisiderophore receptor Irp6A K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DIP0584 Putative iron transport system membrane protein K02015 ABC.FEV.P; iron complex transport system permease protein
D DIP1084 Putative iron transport membrane protein, FecCD-family K02015 ABC.FEV.P; iron complex transport system permease protein
D DIP0109 irp6B; Membrane protein permease Irp6B K02015 ABC.FEV.P; iron complex transport system permease protein
D DIP0583 Putative iron transport system membrane protein K02015 ABC.FEV.P; iron complex transport system permease protein
D DIP0585 Putative iron transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DIP1085 Putative iron ABC transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DIP0110 irp6C; ATP-binding protein Irp6C K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DIP1067 Putative ABC transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DIP0169 Putative secreted protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D DIP0173 Putative membrane protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D DIP0171 Putative membrane protein K11708 troC; manganese/zinc/iron transport system permease protein
D DIP0172 Putative membrane protein K11709 troD; manganese/zinc/iron transport system permease protein
D DIP0170 Putative membrane protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D DIP0441 Putative membrane protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D DIP0440 Putative ABC transport system ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D DIP1452 Putative membrane protein K03523 bioY; biotin transport system substrate-specific component
D DIP1454 Putative membrane protein K16783 bioN; biotin transport system permease protein
D DIP1453 Putative ABC transport system, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D DIP2341 Putative integral membrane transport protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D DIP0954 Putative ABC transport system membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D DIP2342 Putative integral membrane transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D DIP0953 Putative ABC transport system ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D DIP0951 Putative membrane protein K16925 ykoE; energy-coupling factor transport system permease protein
D DIP0615 Putative ABC transport system exported protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D DIP0618 Putative ABC transport system membrane protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D DIP0617 Putative ABC transport system membrane protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D DIP0616 Putative ABC transport system ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D DIP0175 Putative ABC transport system, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DIP0174 Putative ABC transport system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DIP0089 Putative membrane protein K20491 nisE; lantibiotic transport system permease protein
D DIP0090 ABC transport system ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D DIP2324 Putative ABC transport system integral membrane protein K09813 hrtB; hemin transport system permease protein
D DIP2323 Putative ABC transport system, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D DIP0749 Putative cell division protein K09811 ftsX; cell division transport system permease protein
D DIP0748 ftsE; Cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D DIP2049 Putative ABC transport system membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DIP2143 Putative ABC transport system integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DIP2107 Putative integral membrane transport protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DIP0461 Putative ABc transport system integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DIP1299 Putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DIP1989 Putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DIP2106 Putative ABC transport system, ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DIP2144 Putative ABC transport system, ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DIP2279 Putative ABC transport system, ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DIP0460 Putative ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DIP0755 Putative lantibiotic ABC-transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DIP1298 Putative ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DIP1990 Putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DIP2050 Putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DIP1885 Putative ABC transport system permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DIP0485 Putative ABC transport system integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DIP0449 Putative ABC transport system integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DIP1886 Putative ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DIP0484 Putative ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DIP0448 Putative ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DIP1293 Putative ABC transport system, ATP-binding subunit K09013 sufC; Fe-S cluster assembly ATP-binding protein
D DIP2363 Putative integral membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D DIP0179 Putative membrane protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D DIP1474 Putative DNA-damage inducible protein K26937 dinF; MATE family, multidrug efflux pump
D DIP2270 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D DIP0285 Putative glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D DIP0501 Putative nitrate/nitrite transport system integral membrane protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DIP0502 narK; Putative nitrate/nitrite transport system integral membrane protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DIP2168 probable integral membrane transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DIP1941 Putative membrane protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D DIP0272 Putative antibiotic resistance protein (membrane protein) K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D DIP2287 Putative integral membrane transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D DIP1428 ptsI; phosphoenolpyruvate:sugar phosphotransferase system enzyme I (PTS system) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DIP1435 Putative carbohydrate carrier protein (PTS system) K02784 ptsH; phosphocarrier protein HPr
D DIP1151 ptsG; PTS system, glucose-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D DIP2333 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D DIP2336 Conserved hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D DIP2236 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D DIP0724 Putative membrane transport protein K10716 kch; voltage-gated potassium channel
D DIP0859 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D DIP0607 Putative membrane protein K22044 ybiO; moderate conductance mechanosensitive channel
D DIP1799 Putative mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel
D DIP1215 Putative magnesium and cobalt transport protein K03284 corA; magnesium transporter
D DIP1210 Putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DIP1211 Putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DIP1716 Putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DIP0980 aroP2; Aromatic amino acid transport protein AroP K16237 aroP; aromatic amino acid permease
D DIP0914 lysI; L-Lysine transport protein K03758 arcD; arginine:ornithine antiporter / lysine permease
D DIP1101 Cation-efflux system integral membrane protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D DIP2183 Putative integral membrane protein K20470 mmpL3; trehalose monomycolate/heme transporter
D DIP0589 Putative membrane protein K11939 rhtA; inner membrane transporter RhtA
D DIP1581 Putative membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D DIP1661 Conserved hypothetical integral membrane protein K07084 yuiF; putative amino acid transporter
D DIP2078 Putative membrane transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D DIP0253 gntP; gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D DIP1255 dcuA; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D DIP1198 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D DIP0012 lldP; L-lactate permease K03303 lutP; lactate permease
D DIP1033 Putative L-lactate permease K03303 lutP; lactate permease
D DIP2201 betT; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D DIP1022 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D DIP0791 Putative transport membrane protein K14393 actP; cation/acetate symporter
D DIP2108 Putative integral membrane protein K03312 gltS; glutamate:Na+ symporter, ESS family
D DIP1193 Putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D DIP1931 sodium transport protein K03498 trkH; trk/ktr system potassium uptake protein
D DIP1930 Conserved hypothetical protein K03499 trkA; trk/ktr system potassium uptake protein
D DIP1943 xanthine/uracil permeases family protein K24206 uacT; uric acid transporter
D DIP0780 Putative membrane protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D DIP0489 sdaC; serine transporter K03837 sdaC; serine transporter
D DIP0952 Putative chloride channel related membrane protein K03281 clcA; chloride channel protein, CIC family
D DIP1149 Putative transport protein K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D DIP0293 Putative Na+/H+ antiporter subunit K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D DIP0292 Putative Na+/H+ antiporter subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D DIP0291 Putative Na+/H+ antiporter subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D DIP0290 Conserved hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D DIP0289 Putative membrane protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D DIP0288 Putative membrane protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D DIP2371 Putative conserved integral membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D DIP1091 lysE; lysine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D DIP1767 Putative LysE type translocator K05835 rhtC; threonine efflux protein
D DIP2366 Putative integral membrane amino acid transport protein K26605 azlC; branched chain amino acid efflux pump
D DIP2365 Putative integral membrane amino acid transport protein K26606 azlD; branched chain amino acid efflux pump
D DIP1711 Putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D DIP0116 Putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D DIP1599 Putative cell division protein K03588 ftsW; cell division protein FtsW
D DIP0412 Putative cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D DIP0500 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DIP0499 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DIP0497 narI; Putative nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DIP0883 Putative membrane protein K03811 pnuC; nicotinamide mononucleotide transporter
D DIP2184 Putative integral membrane protein K20468 K20468; putative heme transporter
D DIP1391 Putative membrane protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cdi02044]
D DIP0313 Conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DIP0314 Putative membrane protein K12510 tadB; tight adherence protein B
D DIP1771 Putative membrane protein K02237 comEA; competence protein ComEA
D DIP0556 Putative FtsK/SpoIIIE family ATP-binding protein K27086 eccC; ESX secretion system protein EccC
D DIP0555 Putative surface-anchored membrane protein K27087 eccD; ESX secretion system protein EccD
D DIP0559 Conserved hypothetical ESAT-6-like protein K14956 esx; ESAT-6 family protein
D DIP0558 Conserved hypothetical CFP-10-like protein K14956 esx; ESAT-6 family protein
D DIP0699 secA; Translocase protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DIP1203 secA2; Putative preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DIP1372 secD; Putative protein export membrane protein K03072 secD; preprotein translocase subunit SecD
D DIP0430 secE; Putative translocase protein K03073 secE; preprotein translocase subunit SecE
D DIP1371 secF; Putative protein export membrane protein K03074 secF; preprotein translocase subunit SecF
D DIP1307 secG; protein transport/translocation membrane protein K03075 secG; preprotein translocase subunit SecG
D DIP0540 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D DIP1533 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DIP1538 Putative cell division protein K03110 ftsY; fused signal recognition particle receptor
D DIP1374 Conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D DIP2273 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP2379 Putative integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DIP1242 tatA; Sec-independent twin-arginine translocase system protein K03116 tatA; sec-independent protein translocase protein TatA
D DIP0996 Putative Sec-independent twin-arginine translocase system protein K03117 tatB; sec-independent protein translocase protein TatB
D DIP1241 tatC; Sec-independent twin-arginine translocase system protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cdi02042]
D DIP0222 tox; Diphtheria toxin precursor K00776 tox; NAD-diphthamide ADP-ribosyltransferase [EC:2.4.2.36]
D DIP1210 Putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DIP1211 Putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DIP1716 Putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DIP1922 Putative membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cdi02022]
D DIP0390 Putative two component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D DIP0391 regX3; Putative two component system response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D DIP0855 Putative two component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D DIP0854 Putative two component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D DIP0695 mtrB; Putative two component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D DIP0694 mtrA2; Putative two component system response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D DIP1935 Putative two somponent system sensor kinase protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DIP1936 Putative two component system response regulator protein K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:cdi02035]
D DIP0313 Conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cdi04812]
D DIP1595 ftsZ; Cell division protein K03531 ftsZ; cell division protein FtsZ
D DIP2377 parA; Putative chromosome partitioning protein K03496 parA; chromosome partitioning protein
D DIP1187 Putative regulatory protein K03496 parA; chromosome partitioning protein
D DIP2376 parB; Putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cdi04147]
D DIP0917 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DIP0892 Putative glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DIP1310 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DIP1309 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DIP1553 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DIP0025 ppiA; probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DIP2020 groEL2; Chaperonin GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP0576 groEL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DIP2120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DIP0832 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DIP0581 Conserved hypothetical protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DIP0580 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DIP0470 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D DIP2255 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP0427 Putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D DIP2363 Putative integral membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D DIP1725 Putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0387 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0386 Putative ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DIP0692 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DIP0541 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DIP1369 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DIP1174 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DIP1173 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DIP1674 Hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D DIP1015 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D DIP1065 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DIP2235 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DIP1671 glnA2; glutamine synthetase II K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP1644 glnA1; glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DIP0403 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DIP1104 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DIP0839 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DIP0368 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DIP1071 etfA; Electron transfer flavoprotein alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D DIP1304 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DIP1308 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DIP0389 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cdi02048]
D DIP0037 Conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D DIP2214 Conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D DIP0038 Conserved hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D DIP2215 Conserved hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D DIP2213 Putative helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D DIP2209 Conserved hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC
D DIP2212 Conserved hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE
D DIP0036 Conserved hypothetical protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D DIP2312 Putative type I restriction/modification system protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DIP2313 Putative type I restriction/modification system DNA specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D DIP2314 Putative type I restriction/modification system DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DIP1894 Hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D DIP0804 Hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D DIP1895 Putative DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DIP0805 Putative DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DIP2153 Putative bacteriophage holin protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D DIP1757 Putative Mrr restriction system protein K07448 mrr; restriction system protein
D DIP1595 ftsZ; Cell division protein K03531 ftsZ; cell division protein FtsZ
D DIP0252 Putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1115 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DIP1072 Putative aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:cdi04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:cdi04090]
C 01504 Antimicrobial resistance genes [BR:cdi01504]
D DIP0272 Putative antibiotic resistance protein (membrane protein) K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D DIP1948 Putative dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D DIP1941 Putative membrane protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cdi03100]
D tRNA-Ala-1 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-4 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-6 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-2 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-1 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-1 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-5 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-3 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-1 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-1 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-2 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-2 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-1 23S_rRNA; possible 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S_rRNA; possible 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DIP0161 Putative oxidoreductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D DIP1090 Putative aldo/keto-reductase family protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D DIP0162 Putative oxidoreductase, FAD-binding K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D DIP0428 Putative FAD-linked oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D DIP0645 lpdA; Dihydrolipoamide dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D DIP1494 Putative glutathione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D DIP2260 msrA; peptide methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DIP1393 Conserved hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DIP1093 Conserved hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D DIP1389 Putative secreted protein K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D DIP1843 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DIP1362 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DIP1419 Conserved hypothetical protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D DIP1420 dirA; iron repressible polypeptide (putative reductase) K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D DIP1841 Conserved hypothetical protein K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D DIP1866 Putative bacterioferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D DIP2056 Putative ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D DIP0965 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D DIP0823 Conserved hypothetical protein K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D DIP0379 Putative oxidoreductase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DIP1218 Conserved hypothetical protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D DIP0132 Putative sugar acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D DIP1911 Putative acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D DIP1227 Putative transferase/membrane protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DIP2175 Putative integral membrane acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D DIP0778 Putative secreted protein K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D DIP0388 Putative glycosyl transferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D DIP1554 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DIP1135 Putative kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D DIP1670 glnE; adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D DIP1007 Putative type B carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D DIP2191 Conserved hypothetical protein K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D DIP1802 Conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DIP1773 Phosphoglycerate mutase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D DIP0873 Conserved hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DIP1055 Conserved hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D DIP2017 Putative secreted protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D DIP1323 Putative peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DIP2045 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DIP0971 Conserved hypothetical protein K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D DIP0225 Putative secreted polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D DIP0927 Conserved hypothetical protein K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D DIP2111 Putative hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D DIP2305 Conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D DIP0786 Putative FK506-binding protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D DIP1261 cysS2; cysteinyl-tRNA synthetase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D DIP0787 accDA; Putative carboxyltransferase subunit of acetyl-CoA carboxylase K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D DIP2188 pccB; propionyl-CoA carboxylase complex B subunit K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-]
D DIP0658 pccB1; Propionyl CoA carboxylase beta chain 1 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.- 2.1.3.-]
D DIP0660 pccB2; propionyl-CoA carboxylase beta chain 2 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.- 2.1.3.-]
D DIP0061 Putative cation-transporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D DIP1032 Putative oxididoreductase subunit K18928 lldE; L-lactate dehydrogenase complex protein LldE
D DIP1031 Putative iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D DIP1030 Conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D DIP0531 Conserved hypothetical protein K02379 fdhD; FdhD protein
D DIP1291 Putative nitrogen fixation protein NifU-related protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D DIP1070 etfB; Electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D DIP0657 Hypothetical protein K27095 accE5; propionyl-/long chain acyl-CoA carboxylase epsilon subunit
D DIP1812 Putative short chain dehydrogenase K27306 cmrA; mycolic acid reductase
C 99984 Nucleotide metabolism
D DIP1868 Conserved hypothetical protein K03647 nrdI; protein involved in ribonucleotide reduction
D DIP1923 nrdI; Conserved hypothetical protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D DIP1745 Conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D DIP0775 Conserved hypothetical protein K21687 rpfA; resuscitation-promoting factor RpfA
D DIP0874 Putative secreted protein K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
D DIP0747 Putative membrane protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D DIP2262 Putative oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D DIP0866 Putative membrane protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DIP0320 cspA; cold-shock protein K03704 cspA; cold shock protein
D DIP0776 cspB; cold shock protein B K03704 cspA; cold shock protein
D DIP0190 Putative anti-repressor protein K07741 antB; anti-repressor protein
D DIP1528 Putative transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D DIP1857 Conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D DIP1793 FKBP-type peptidyl-prolyl cis-trans isomerase K03545 tig; trigger factor
D DIP0750 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D DIP0667 hypC; hydrogenase expression/formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D DIP0666 hypD; hydrogenase isoenzymes formation protein K04654 hypD; hydrogenase expression/formation protein HypD
D DIP0668 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D DIP0669 Putative hydrogenase maturation protein K04656 hypF; hydrogenase maturation protein HypF
D DIP1869 Conserved hypothetical protein K06191 nrdH; glutaredoxin-like protein NrdH
D DIP1512 Conserved hypothetical protein K07391 comM; magnesium chelatase family protein
D DIP0413 Putative membrane protein K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D DIP1513 Conserved hypothetical protein K07460 yraN; putative endonuclease
D DIP1251 Conserved hypothetical protein K07465 K07465; putative RecB family exonuclease
D DIP1511 Conserved hypothetical protein K04096 smf; DNA processing protein
D DIP1351 Conserved hypothetical protein (putative ATP/GTP binding protein) K07478 ycaJ; putative ATPase
D DIP0766 tnpA1; transposase A K07483 K07483; transposase
D DIP2074 Putative tranposase K07483 K07483; transposase
C 99979 Viral proteins
C 99998 Others
D DIP1455 Conserved hypothetical protein K03969 pspA; phage shock protein A
D DIP0260 Conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DIP1190 Putative peptide transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D DIP2129 Putative binding-protein-dependent integral membrane transport protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D DIP1012 Putative sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D DIP0947 Putative sodium-dependent ABC transport system membrane protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D DIP1542 Putative amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D DIP2251 Putative sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D DIP1737 brnQ; branched-chain amino acid ABC transport system membrane protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D DIP1221 Putative sodium-dependent transport membrane protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D DIP0830 Putative membrane protein K07085 K07085; putative transport protein
D DIP0570 Putative membrane protein K07085 K07085; putative transport protein
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D DIP1806 cstA1; carbon starvation protein K06200 cstA; carbon starvation protein
D DIP0969 Putative GTP-binding elongation factor K06207 typA; GTP-binding protein
D DIP1286 Conserved hypothetical protein K07166 K07166; ACT domain-containing protein
D DIP1718 Putative PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D DIP2306 Putative hydrolase K07273 acm; lysozyme
D DIP0483 Putative secreted protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D DIP1904 Conserved hypothetical protein K02039 phoU; phosphate transport system protein
D DIP1460 Putative membrane protein K05794 terC; tellurite resistance protein TerC
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DIP0319 Putative ATP-dependent RNA helicase, DeaD/DeaH box family K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D DIP1800 Putative hemoglobin K06886 glbN; hemoglobin
D DIP0250 Putative membrane protein K06994 K06994; putative drug exporter of the RND superfamily
D DIP1295 Conserved hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D DIP1294 Conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D DIP0636 Putative membrane protein K07058 K07058; membrane protein
D DIP2269 Hypothetical protein K07146 K07146; UPF0176 protein
D DIP2301 Conserved hypothetical protein K07146 K07146; UPF0176 protein
D DIP2302 Putative integral membrane protein K03975 dedA; membrane-associated protein
D DIP1356 Putative membrane protein K01421 yhgE; putative membrane protein
D DIP1145 Putative membrane protein K08974 K08974; putative membrane protein
D DIP0614 Putative membrane protein K08981 K08981; putative membrane protein
D DIP1201 Conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D DIP1123 Conserved hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D DIP2182 Conserved hypothetical protein K06860 K06860; putative heme uptake system protein
D DIP1723 Hypothetical protein K06867 K06867; uncharacterized protein
D DIP1768 Conserved hypothetical protein K06867 K06867; uncharacterized protein
D DIP1892 Conserved hypothetical protein K06975 K06975; uncharacterized protein
D DIP0150 Conserved hypothetical protein K06996 K06996; uncharacterized protein
D DIP1118 Integral membrane protein, MmpL family K07003 K07003; uncharacterized protein
D DIP1354 Putative membrane protein K07054 K07054; uncharacterized protein
D DIP1336 Conserved hypothetical protein K07071 K07071; uncharacterized protein
D DIP0463 Putative membrane protein K07089 K07089; uncharacterized protein
D DIP0296 Putative secreted protein K07098 K07098; uncharacterized protein
D DIP0128 Putative membrane protein K07120 K07120; uncharacterized protein
D DIP0130 Putative membrane protein K07120 K07120; uncharacterized protein
D DIP2244 Conserved hypothetical protein K07133 K07133; uncharacterized protein
D DIP1679 Conserved hypothetical protein K07164 K07164; uncharacterized protein
D DIP1206 Conserved hypothetical protein K08999 K08999; uncharacterized protein
D DIP0919 Conserved hypothetical protein K09009 K09009; uncharacterized protein
D DIP0297 Conserved hypothetical protein K09117 K09117; uncharacterized protein
D DIP0733 Putative membrane protein K09118 K09118; uncharacterized protein
D DIP0966 Conserved hypothetical protein K09146 K09146; uncharacterized protein
D DIP1287 Conserved hypothetical protein K09157 K09157; uncharacterized protein
D DIP0613 Putative membrane protein K09167 K09167; uncharacterized protein
D DIP1459 Conserved hypothetical protein K09780 K09780; uncharacterized protein
D DIP0949 Putative ABC transport system membrane protein K09781 K09781; uncharacterized protein
D DIP2356 Putative conserved membrane protein K09790 K09790; uncharacterized protein
D DIP1483 Conserved hypothetical protein K09861 K09861; uncharacterized protein
D DIP0112 Conserved hypothetical protein K05937 K05937; uncharacterized protein
D DIP1478 Conserved hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024