+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Caenorhabditis elegans (nematode)

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E CELE_C25A1.3 tag-72; mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E CELE_C03D6.3 cel-1; mRNA guanylyltransferase K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] E CELE_Y39G10AL.3 cdk-7; Cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E CELE_Y53F4B.13 cmtr-1; Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] E CELE_Y40D12A.1 cmtr-2; Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] E CELE_B0205.8 B0205.8; TFG domain-containing protein K18708 FAM103A1; RNMT-activating mini protein D Cap binding complex E CELE_F37E3.1 ncbp-1; Nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1 E CELE_F26A3.2 ncbp-2; Nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E CELE_F43G9.5 cfim-1; Cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E CELE_D1046.1 cfim-2; RRM domain-containing protein K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E CELE_F59A2.4 clpf-1; Protein clpf-1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E CELE_R144.2 pcf-11; Polyadenylation and cleavage factor homolog 11 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E CELE_Y76B12C.7 cpsf-1; putative cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E CELE_F09G2.4 cpsf-2; putative cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E CELE_Y67H2A.1 cpsf-3; Cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E CELE_F11A10.8 cpsf-4; Cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E CELE_F32D1.9 fipp-1; Pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E CELE_R06A4.9 pfs-2; pre-mRNA 3' end processing protein pfs-2 K15542 PFS2; polyadenylation factor subunit 2 E CELE_C33H5.7 swd-2.2; WD_REPEATS_REGION domain-containing protein K14962 WDR82; COMPASS component SWD2 E CELE_F29F11.6 gsp-1; Serine/threonine-protein phosphatase PP1-alpha K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_F56C9.1 gsp-2; Serine/threonine-protein phosphatase PP1-beta K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_T03F1.5 gsp-4; Serine/threonine-protein phosphatase PP1-delta K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_F52H3.6 F52H3.6; Serine/threonine-protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_C05A2.1 pph-1; Serine/threonine-protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_C09H5.7 C09H5.7; Serine/threonine-protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_C34D4.2 C34D4.2; Serine/threonine-protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_T16G12.7 T16G12.7; Serine/threonine-protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_W09C3.6 gsp-3; Serine/threonine-protein phosphatase PP1-gamma K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_ZK938.1 ZK938.1; Serine/threonine-protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CELE_T13C2.4 ssup-72; RNA polymerase II subunit A C-terminal domain phosphatase ssup-72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E CELE_F28C6.3 cpf-1; Cleavage stimulation factor 50 kDa subunit K14406 CSTF1; cleavage stimulation factor subunit 1 E CELE_F56A8.6 cpf-2; RRM domain-containing protein K14407 CSTF2; cleavage stimulation factor subunit 2 E CELE_F28C6.6 suf-1; Suppressor of forked domain-containing protein K14408 CSTF3; cleavage stimulation factor subunit 3 E CELE_F25G6.2 symk-1; DUF3453 domain-containing protein K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E CELE_W08E3.1 snr-2; putative small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B' E CELE_Y116A8C.42 snr-1; Small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 E CELE_Y49E10.15 snr-6; putative small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E E CELE_ZK652.1 snr-5; putative small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F E CELE_Y71F9B.4 snr-7; putative small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G E CELE_K07A1.15 K07A1.15; Sm domain-containing protein K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 E CELE_C49H3.4 C49H3.4; Sm domain-containing protein K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 E CELE_F09G2.4 cpsf-2; putative cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E CELE_Y67H2A.1 cpsf-3; Cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E CELE_F56A8.6 cpf-2; RRM domain-containing protein K14407 CSTF2; cleavage stimulation factor subunit 2 E CELE_F25G6.2 symk-1; DUF3453 domain-containing protein K06100 SYMPK; symplekin E CELE_R06F6.1 cdl-1; Histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein D DRB sensitivity inducing factor (DSIF) complex E CELE_F54C4.2 spt-4; Transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4 E CELE_K08E4.1 spt-5; Transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E CELE_C18A3.1 damt-1; DNA N6-methyl methyltransferase K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] E CELE_ZK1128.2 mett-10; U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E CELE_F29C4.7 grld-1; RRM domain-containing protein K13190 RBM15; RNA-binding protein 15 D Poly(A) addition factors E CELE_T15H9.6 pap-2; Poly(A) polymerase K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E CELE_Y32F6A.3 pap-1; Poly(A) polymerase K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E CELE_F43G6.5 pap-3; Poly(A) polymerase K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E CELE_ZC308.1 gld-2; Poly(A) RNA polymerase gld-2 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] D Negative regulators of mRNA 3' end processing E CELE_K04C2.4 brd-1; BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1 E CELE_B0336.3 rbm-26; C3H1-type domain-containing protein K13192 RBM26; RNA-binding protein 26 E CELE_F44G4.4 tdp-1; Tar DNA-binding protein homolog 1 K23600 TARDBP; TAR DNA-binding protein 43 C Other processing factors D CELE_Y52B11A.9 dxbp-1; DNA/RNA-binding protein Kin17 WH-like domain-containing protein K13102 KIN; DNA/RNA-binding protein KIN17 D CELE_Y61A9LA.8 sut-2; Zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D CELE_E01A2.2 srrt-1; Serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E CELE_R07E5.14 rnp-4; RNA-binding protein rnp-4 K12876 RBM8A; RNA-binding protein 8A E CELE_R09B3.5 mag-1; Protein mago nashi homolog K12877 MAGOH; protein mago nashi E CELE_C01F6.5 aly-1; Chromatin target of PRMT1 protein C-terminal domain-containing protein K12881 THOC4; THO complex subunit 4 E CELE_M18.7 aly-3; Chromatin target of PRMT1 protein C-terminal domain-containing protein K12881 THOC4; THO complex subunit 4 E CELE_C02B10.4 C02B10.4; RRM domain-containing protein K12881 THOC4; THO complex subunit 4 E CELE_F23B2.6 aly-2; Chromatin target of PRMT1 protein C-terminal domain-containing protein K12881 THOC4; THO complex subunit 4 E CELE_C26D10.2 hel-1; Spliceosome RNA helicase DDX39B homolog K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E CELE_Y65B4A.6 eif-4A3; RNA helicase K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E CELE_F33D11.10 F33D11.10; RNA helicase K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E CELE_W08E3.2 casc-3; Protein CASC3 K14323 CASC3; protein CASC3 E CELE_C16C10.4 C16C10.4; putative histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18 E CELE_R186.7 pnn-1; Pinin/SDK/MemA protein domain-containing protein K13114 PNN; pinin E CELE_C43E11.1 acin-1; SAP domain-containing protein K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus E CELE_K02F3.11 rnp-5; RRM domain-containing protein K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E CELE_F28D9.1 rsr-1; PWI domain-containing protein K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E CELE_T02H6.2 thoc-1; Death domain-containing protein K12878 THOC1; THO complex subunit 1 E CELE_C16A3.8 thoc-2; THO complex subunit 2 K12879 THOC2; THO complex subunit 2 E CELE_F32H2.4 thoc-3; WD_REPEATS_REGION domain-containing protein K12880 THOC3; THO complex subunit 3 E CELE_C01F6.5 aly-1; Chromatin target of PRMT1 protein C-terminal domain-containing protein K12881 THOC4; THO complex subunit 4 E CELE_M18.7 aly-3; Chromatin target of PRMT1 protein C-terminal domain-containing protein K12881 THOC4; THO complex subunit 4 E CELE_C02B10.4 C02B10.4; RRM domain-containing protein K12881 THOC4; THO complex subunit 4 E CELE_F23B2.6 aly-2; Chromatin target of PRMT1 protein C-terminal domain-containing protein K12881 THOC4; THO complex subunit 4 E CELE_Y32H12A.2 thoc-5; THO complex subunit 5 K13174 THOC5; THO complex subunit 5 E CELE_B0513.2 thoc-7; THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7 D TREX-2 complex E CELE_C27F2.10 C27F2.10; PCI domain-containing protein 2 homolog K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E CELE_Y119D3B.15 dss-1; putative 26S proteasome complex subunit dss-1 K10881 SHFM1; 26 proteasome complex subunit DSS1 E CELE_T01C3.2 T01C3.2; Transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor E CELE_F20D12.2 mcm-3AP; PCI domain-containing protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48] D Nuclear pore complex E CELE_R07G3.3 npp-21; TPR_MLP1_2 domain-containing protein K09291 TPR; nucleoprotein TPR E CELE_F10G8.3 rae-1; mRNA export factor rae-1 K14298 RAE1; mRNA export factor E CELE_Y77E11A.13 npp-20; Protein SEC13 homolog K14004 SEC13; protein transport protein SEC13 E CELE_T01G9.4 npp-2; Nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85 E CELE_C09G9.2 npp-23; WD_REPEATS_REGION domain-containing protein K14305 NUP43; nuclear pore complex protein Nup43 E CELE_Y56A3A.17 npp-16; Nuclear pore complex protein npp-16 K14295 NUP50; nuclear pore complex protein Nup50 E CELE_K07F5.13 npp-1; Nucleoporin Nup54 alpha-helical domain-containing protein K14308 NUP54; nuclear pore complex protein Nup54 E CELE_F53F10.5 npp-11; Nsp1_C domain-containing protein K14306 NUP62; nuclear pore complex protein Nup62 E CELE_Y37E3.15 npp-13; Nuclear pore protein K14309 NUP93; nuclear pore complex protein Nup93 E CELE_ZK328.5 npp-10; Nuclear pore complex protein Nup98 K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E CELE_F07A11.3 npp-5; Nuclear pore complex protein 5 K14301 NUP107; nuclear pore complex protein Nup107 E CELE_C29E4.4 npp-15; Nuclear pore complex protein 15 K14300 NUP133; nuclear pore complex protein Nup133 E CELE_Y41D4B.19 npp-8; Nucleoporin_N domain-containing protein K14312 NUP155; nuclear pore complex protein Nup155 E CELE_F56A3.3 npp-6; Nuclear Pore complex Protein K14303 NUP160; nuclear pore complex protein Nup160 E CELE_R06F6.5 npp-19; Nucleoporin NUP35 K14313 NUP35; nuclear pore complex protein Nup53 E CELE_K12D12.2 npp-3; Nuclear Pore complex Protein K14310 NUP205; nuclear pore complex protein Nup205 E CELE_T23H2.1 npp-12; BIG2 domain-containing protein K14314 NUP210; nuclear pore complex protein Nup210 E CELE_C03D6.4 npp-14; Nuclear pore complex protein 14 K14317 NUP214; nuclear pore complex protein Nup214 E CELE_B0240.4 npp-22; Nucleoporin ndc-1 K14315 NDC1; nucleoporin NDC1 E CELE_Y43F4B.4 npp-18; Nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1 E CELE_F59A2.1 npp-9; Nuclear Pore complex Protein K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] E CELE_C15H11.3 nxf-1; Nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor E CELE_C15H11.6 nxf-2; Nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor E CELE_Y71F9AM.5 nxt-1; NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2 D Ran-mediated transport factors E CELE_K01G5.4 ran-1; GTP-binding nuclear protein ran-1 K07936 RAN; GTP-binding nuclear protein Ran E CELE_F35H8.5 exc-7; RRM domain-containing protein K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E CELE_H40L08.1 H40L08.1; UBX domain-containing protein K18726 FAF2; FAS-associated factor 2 E CELE_C41C4.8 cdc-48.2; Transitional endoplasmic reticulum ATPase homolog 2 K13525 VCP; transitional endoplasmic reticulum ATPase E CELE_C06A1.1 cdc-48.1; Transitional endoplasmic reticulum ATPase homolog 1 K13525 VCP; transitional endoplasmic reticulum ATPase E CELE_C42C1.13 vkmt-1; Protein-lysine methyltransferase C42C1.13 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E CELE_ZK742.1 xpo-1; Importin N-terminal domain-containing protein K14290 XPO1; exportin-1 E CELE_C35A5.8 C35A5.8; Exportin-7 K18460 XPO7; exportin-7 E CELE_C29E4.3 ran-2; Ran GTPase-activating protein 2 K14319 RANGAP1; Ran GTPase-activating protein 1 E CELE_C27H5.3 fust-1; RNA-binding protein FUS K14651 TAF15; transcription initiation factor TFIID subunit 15 D eIF4F and regulatory proteins E CELE_C05D9.5 ife-4; Eukaryotic translation initiation factor 4E-4 K03259 EIF4E; translation initiation factor 4E E CELE_R04A9.4 ife-2; Eukaryotic translation initiation factor 4E-2 K03259 EIF4E; translation initiation factor 4E E CELE_Y57A10A.30 ife-5; Eukaryotic translation initiation factor 4E-5 K03259 EIF4E; translation initiation factor 4E E CELE_B0348.6 ife-3; Eukaryotic translation initiation factor 4E-3 K03259 EIF4E; translation initiation factor 4E E CELE_F53A2.6 ife-1; eIF-4F 25 kDa subunit K03259 EIF4E; translation initiation factor 4E E CELE_F57B9.3 F57B9.3; RNA helicase K03257 EIF4A; translation initiation factor 4A E CELE_F57B9.6 inf-1; Eukaryotic initiation factor 4A K03257 EIF4A; translation initiation factor 4A E CELE_M110.4 ifg-1; MIF4G domain-containing protein K03260 EIF4G; translation initiation factor 4G E CELE_F56F3.1 ifet-1; Translational repressor ifet-1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E CELE_W02G9.5 angl-1; Endonuclease/exonuclease/phosphatase domain-containing protein K18729 ANGEL; protein angel E CELE_F56A11.1 gex-2; Cytoplasmic FMR1-interacting protein homolog K05749 CYFIP; cytoplasmic FMR1 interacting protein E CELE_B0414.5 cpb-3; Cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_C30B5.3 cpb-2; Cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_C40H1.1 cpb-1; Cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_Y54E10A.4 fog-1; RRM domain-containing protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_Y71H2AM.19 laf-1; ATP-dependent RNA helicase laf-1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E CELE_Y54E10A.9 vbh-1; RNA helicase K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E CELE_C18H9.3 gyf-1; GYF domain-containing protein gyf-1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E CELE_Y106G6H.2 pab-1; Polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein E CELE_F18H3.3 pab-2; Polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein E CELE_E01G4.4 pqn-27; Prion-like-(Q/N-rich)-domain-bearing protein K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 E CELE_F01G4.3 skih-2; Helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E CELE_C11D2.7 C11D2.7; PUA domain-containing protein K07575 MCTS; malignant T-cell-amplified sequence E CELE_Y47D3A.21 Y47D3A.21; Density-regulated protein homolog K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E CELE_T20G5.9 T20G5.9; Partner of Y14 and mago K14294 WIBG; partner of Y14 and mago E CELE_F42A6.7 hrpa-1; Heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E CELE_R10E9.1 msi-1; RNA-binding protein Musashi homolog 1 K14411 MSI; RNA-binding protein Musashi E CELE_K07A12.4 hbs-1; Tr-type G domain-containing protein K14416 HBS1; elongation factor 1 alpha-like protein E CELE_R74.6 pelo-1; Protein pelota homolog K06965 PELO; protein pelota E CELE_C17E4.5 pabp-2; RRM domain-containing protein K14396 PABPN1; polyadenylate-binding protein 2 E CELE_EEED8.12 EEED8.12; Putative RNA-binding protein EEED8.12 K14396 PABPN1; polyadenylate-binding protein 2 E CELE_EEED8.4 EEED8.4; Putative RNA-binding protein EEED8.4 K14396 PABPN1; polyadenylate-binding protein 2 E CELE_T08B6.5 sgnh-1; RRM domain-containing protein K14396 PABPN1; polyadenylate-binding protein 2 E CELE_T07D4.4 ddx-19; RNA helicase K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E CELE_C50F2.3 syf-1; Pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1 E CELE_Y53G8AR.6 Y53G8AR.6; SAP domain-containing protein K18732 SARNP; SAP domain-containing ribonucleoprotein E CELE_C26D10.1 ran-3; Regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation E CELE_F20D1.4 plp-2; DUF3467 domain-containing protein K21772 PURA; transcriptional activator protein Pur-alpha E CELE_F45E4.2 plp-1; Transcriptional activator plp-1 K21772 PURA; transcriptional activator protein Pur-alpha C Surveillance factors D Surveillance complex E CELE_T05H4.6 erfa-1; Eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1 E CELE_H19N07.1 erfa-3; Tr-type G domain-containing protein K03267 ERF3; peptide chain release factor subunit 3 E CELE_C05C10.2 C05C10.2; DNA2/NAM7 helicase-like C-terminal domain-containing protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E CELE_Y48G8AL.6 smg-2; Regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E CELE_Y73B6BL.18 smg-3; MIF4G domain-containing protein K14327 UPF2; regulator of nonsense transcripts 2 E CELE_F46B6.3 smg-4; UPF3 domain-containing protein K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E CELE_F38H4.9 let-92; Serine/threonine-protein phosphatase 2A catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E CELE_F48E8.5 paa-1; putative serine/threonine-protein phosphatase PP2A regulatory subunit K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E CELE_F26E4.1 sur-6; Serine/threonine-protein phosphatase 2A regulatory subunit sur-6 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E CELE_C25A1.9 rsa-1; Serine/threonine-protein phosphatase 2A regulatory subunit rsa-1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E CELE_F43B10.1 F43B10.1; EF-hand domain-containing protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E CELE_C13G3.3 pptr-2; Serine/threonine protein phosphatase 2A regulatory subunit K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E CELE_W08G11.4 pptr-1; Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E CELE_C48B6.6 smg-1; Serine/threonine-protein kinase smg-1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E CELE_Y54F10AL.2 smg-6; PIN domain-containing protein K11124 SMG6; protein SMG6 [EC:3.1.-.-] E CELE_Y73B6A.4 smg-7; DNA/RNA-binding domain-containing protein K14409 SMG7; protein SMG7 E CELE_K04B12.3 smg-8; Nonsense-mediated mRNA decay factor SMG8 K18734 SMG8; protein SMG8 E CELE_Y54E2A.2 smg-9; Nonsense-mediated mRNA decay factor SMG9 K18735 SMG9; protein SMG9 E CELE_C18H9.3 gyf-1; GYF domain-containing protein gyf-1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E CELE_Y37E11AM.1 smgl-2; ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E CELE_Y38C9A.2 cgp-1; GTP-binding protein cgp-1 K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E CELE_ZK945.3 puf-12; Pumilio domain-containing protein 12 K14844 PUF6; pumilio homology domain family member 6 E CELE_F36D4.3 hum-2; Myosin motor domain-containing protein K10357 MYO5; myosin V E CELE_C43G2.2 bicd-1; Protein bicaudal D homolog K18739 BICD; protein bicaudal D E CELE_C10G6.1 egal-1; Egalitarian protein homolog K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals E CELE_M03F4.2 act-4; Actin-4 K05692 ACTB_G1; actin beta/gamma 1 E CELE_T04C12.4 act-3; Actin-3 K05692 ACTB_G1; actin beta/gamma 1 E CELE_T04C12.6 act-1; Actin-1 K05692 ACTB_G1; actin beta/gamma 1 E CELE_T04C12.5 act-2; Actin-2 K05692 ACTB_G1; actin beta/gamma 1 E CELE_T25C8.2 act-5; Actin K05692 ACTB_G1; actin beta/gamma 1 E CELE_K11G9.6 mtl-1; Metallothionein-1 K14739 MT1_2; metallothionein 1/2 D Trans-acting binding proteins E CELE_C12D8.1 fubl-1; K Homology domain-containing protein K13210 FUBP; far upstream element-binding protein E CELE_F31E3.5 eef-1A.1; Elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E CELE_R03G5.1 eef-1A.2; Elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E CELE_F17C11.9 eef-1G; putative elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma E CELE_F55A4.5 stau-1; DRBM domain-containing protein K17597 STAU; double-stranded RNA-binding protein Staufen E CELE_D2089.4 ptb-1; RRM domain-containing protein K13218 PTBP1; polypyrimidine tract-binding protein 1 E CELE_Y73B6BL.6 sqd-1; RRM domain-containing protein K03102 SQD; squid E CELE_B0414.5 cpb-3; Cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_C30B5.3 cpb-2; Cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_C40H1.1 cpb-1; Cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_Y54E10A.4 fog-1; RRM domain-containing protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E CELE_F56A11.1 gex-2; Cytoplasmic FMR1-interacting protein homolog K05749 CYFIP; cytoplasmic FMR1 interacting protein E CELE_Y119D3B.17 pes-4; K Homology domain-containing protein K21444 PCBP3_4; poly(rC)-binding protein 3/4 E CELE_F46F11.2 cey-2; CSD domain-containing protein K09276 YBX1; Y-box-binding protein 1 E CELE_M01E11.5 cey-3; CSD domain-containing protein K09276 YBX1; Y-box-binding protein 1 E CELE_Y39A1C.3 cey-4; CSD domain-containing protein K09276 YBX1; Y-box-binding protein 1 C mRNA cycle factors D Common to processing body (P body) and stress granule E CELE_Y39G8C.1 xrn-1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E CELE_T07D3.7 alg-2; Protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C E CELE_R09A1.1 ergo-1; Piwi-like protein ergo-1 K11593 ELF2C; eukaryotic translation initiation factor 2C E CELE_F48F7.1 alg-1; Protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C E CELE_C05D9.5 ife-4; Eukaryotic translation initiation factor 4E-4 K03259 EIF4E; translation initiation factor 4E E CELE_R04A9.4 ife-2; Eukaryotic translation initiation factor 4E-2 K03259 EIF4E; translation initiation factor 4E E CELE_Y57A10A.30 ife-5; Eukaryotic translation initiation factor 4E-5 K03259 EIF4E; translation initiation factor 4E E CELE_B0348.6 ife-3; Eukaryotic translation initiation factor 4E-3 K03259 EIF4E; translation initiation factor 4E E CELE_F53A2.6 ife-1; eIF-4F 25 kDa subunit K03259 EIF4E; translation initiation factor 4E E CELE_C05C10.2 C05C10.2; DNA2/NAM7 helicase-like C-terminal domain-containing protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E CELE_Y48G8AL.6 smg-2; Regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E CELE_Y71H2AM.19 laf-1; ATP-dependent RNA helicase laf-1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E CELE_Y54E10A.9 vbh-1; RNA helicase K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E CELE_C07H6.5 cgh-1; ATP-dependent RNA helicase cgh-1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E CELE_F53G12.5 mex-3; K Homology domain-containing protein K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] E CELE_Y18D10A.17 car-1; Protein LSM14 homolog car-1 K18749 LSM14; protein LSM14 E CELE_F46F11.2 cey-2; CSD domain-containing protein K09276 YBX1; Y-box-binding protein 1 E CELE_M01E11.5 cey-3; CSD domain-containing protein K09276 YBX1; Y-box-binding protein 1 E CELE_Y39A1C.3 cey-4; CSD domain-containing protein K09276 YBX1; Y-box-binding protein 1 E CELE_R06A4.4 imb-2; Importin N-terminal domain-containing protein K18752 TNPO1; transportin-1 E CELE_C48B6.6 smg-1; Serine/threonine-protein kinase smg-1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E CELE_Y54F10AL.2 smg-6; PIN domain-containing protein K11124 SMG6; protein SMG6 [EC:3.1.-.-] E CELE_Y73B6A.4 smg-7; DNA/RNA-binding domain-containing protein K14409 SMG7; protein SMG7 E CELE_F02E9.2 lin-28; Protein lin-28 K18754 LIN28; protein lin-28 E CELE_M7.3 bcc-1; SAM domain-containing protein K18756 BICC1; protein bicaudal C E CELE_F42A6.7 hrpa-1; Heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E CELE_ZK909.2 kin-1; Protein kinase domain-containing protein K04345 PKA; protein kinase A [EC:2.7.11.11] E CELE_R144.7 larp-1; La-related protein 1 K18757 LARP1; la-related protein 1 D P-body specific factors E CELE_F52G2.1 dcap-2; m7GpppN-mRNA hydrolase dcap-2 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E CELE_Y55F3AM.12 dcap-1; mRNA-decapping enzyme 1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E CELE_F40F8.9 lsm-1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E CELE_T10G3.6 gut-2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E CELE_Y62E10A.12 lsm-3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E CELE_F32A5.7 lsm-4; putative U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E CELE_F28F8.3 lsm-5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E CELE_Y71G12B.14 lsm-6; Sm domain-containing protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E CELE_ZK593.7 lsm-7; Sm domain-containing protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E CELE_Y73B6BL.32 lsm-8; U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E CELE_C18C4.10 klc-2; Kinesin light chain K10407 KLC; kinesin light chain E CELE_M7.2 klc-1; Kinesin light chain K10407 KLC; kinesin light chain E CELE_F36D4.3 hum-2; Myosin motor domain-containing protein K10357 MYO5; myosin V E CELE_C44B11.3 mec-12; Detyrosinated tubulin alpha-3 chain K07374 TUBA; tubulin alpha E CELE_F44F4.11 tba-4; Tubulin alpha chain K07374 TUBA; tubulin alpha E CELE_F26E4.8 tba-1; Tubulin alpha chain K07374 TUBA; tubulin alpha E CELE_F16D3.1 tba-5; Tubulin alpha chain K07374 TUBA; tubulin alpha E CELE_F32H2.9 tba-6; Tubulin alpha chain K07374 TUBA; tubulin alpha E CELE_C47B2.3 tba-2; Tubulin alpha-2 chain K07374 TUBA; tubulin alpha E CELE_T28D6.2 tba-7; Tubulin alpha chain K07374 TUBA; tubulin alpha E CELE_F40F4.5 tba-9; Tubulin alpha chain K07374 TUBA; tubulin alpha E CELE_ZK899.4 tba-8; Tubulin alpha-8 chain K07374 TUBA; tubulin alpha E CELE_B0414.5 cpb-3; Cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_C30B5.3 cpb-2; Cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_C40H1.1 cpb-1; Cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_Y54E10A.4 fog-1; RRM domain-containing protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E CELE_F57B9.2 let-711; CCR4-NOT transcription complex subunit let-711 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E CELE_B0286.4 ntl-2; NOT2/NOT3/NOT5 C-terminal domain-containing protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E CELE_Y56A3A.1 ntl-3; Not3 domain-containing protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E CELE_C49H3.5 ntl-4; CCR4-NOT transcription complex subunit 4 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E CELE_ZC518.3 ccr-4; poly(A)-specific ribonuclease K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E CELE_Y56A3A.20 ccf-1; CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E CELE_F48E8.6 disl-2; DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E CELE_F31E3.4 panl-2; PAN (PolyA-specific riboNucLease) subunit K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E CELE_ZK632.7 panl-3; PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E CELE_C03C11.2 fog-3; Anti-proliferative protein domain-containing protein K14443 TOB; protein Tob/BTG E CELE_F56F3.1 ifet-1; Translational repressor ifet-1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E CELE_F43G6.9 patr-1; Protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E CELE_Y73B6BL.18 smg-3; MIF4G domain-containing protein K14327 UPF2; regulator of nonsense transcripts 2 E CELE_F46B6.3 smg-4; UPF3 domain-containing protein K14328 UPF3; regulator of nonsense transcripts 3 E CELE_C12C8.3 lin-41; Protein lin-41 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E CELE_Y54E10BR.6 rpb-7; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D Stress granule specific factors E CELE_Y46G5A.13 tiar-2; RRM domain-containing protein K13201 TIA1; nucleolysin TIA-1/TIAR E CELE_C18A3.5 tiar-1; RRM domain-containing protein K13201 TIA1; nucleolysin TIA-1/TIAR E CELE_Y106G6H.2 pab-1; Polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein E CELE_F18H3.3 pab-2; Polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein E CELE_F55A4.5 stau-1; DRBM domain-containing protein K17597 STAU; double-stranded RNA-binding protein Staufen E CELE_K08F4.2 gtbp-1; ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E CELE_E04D5.1 eif-2A; Eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A E CELE_Y54E2A.11 eif-3.B; Eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B E CELE_F57B9.3 F57B9.3; RNA helicase K03257 EIF4A; translation initiation factor 4A E CELE_F57B9.6 inf-1; Eukaryotic initiation factor 4A K03257 EIF4A; translation initiation factor 4A E CELE_Y65B4A.6 eif-4A3; RNA helicase K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E CELE_F33D11.10 F33D11.10; RNA helicase K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E CELE_M110.4 ifg-1; MIF4G domain-containing protein K03260 EIF4G; translation initiation factor 4G E CELE_T01H8.1 rskn-1; Ribosomal protein S6 kinase K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E CELE_K04D7.1 rack-1; Small ribosomal subunit protein RACK1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E CELE_C15H11.3 nxf-1; Nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor E CELE_C15H11.6 nxf-2; Nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor E CELE_F41H10.6 hda-6; Histone deacetylase 6 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] E CELE_Y50D4C.3 Y50D4C.3; Tudor domain-containing protein K18404 TDRD3; tudor domain-containing protein 3 E CELE_T12F5.5 larp-5; HTH La-type RNA-binding domain-containing protein K18763 LARP4; la-related protein 4 B mRNA degradation factors C 5'-3' decay D Decapping complex E CELE_Y55F3AM.12 dcap-1; mRNA-decapping enzyme 1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E CELE_F52G2.1 dcap-2; m7GpppN-mRNA hydrolase dcap-2 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E CELE_C07H6.5 cgh-1; ATP-dependent RNA helicase cgh-1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E CELE_F43G6.9 patr-1; Protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E CELE_F40F8.9 lsm-1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E CELE_T10G3.6 gut-2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E CELE_Y62E10A.12 lsm-3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E CELE_F32A5.7 lsm-4; putative U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E CELE_F28F8.3 lsm-5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E CELE_Y71G12B.14 lsm-6; Sm domain-containing protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E CELE_ZK593.7 lsm-7; Sm domain-containing protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E CELE_Y73B6BL.32 lsm-8; U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E CELE_Y39G8C.1 xrn-1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E CELE_Y48B6A.3 xrn-2; 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Other 5'-3' decay factors E CELE_Y113G7A.9 dcs-1; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] C 3'-5' decay D Core exosome factors E CELE_Y48A6B.5 exos-1; Exosome complex component CSL4 homolog K07573 CSL4; exosome complex component CSL4 E CELE_Y73B6BL.3 exos-2; Exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4 E CELE_F59C6.4 exos-3; Ribosomal RNA-processing protein 40 K03681 RRP40; exosome complex component RRP40 E CELE_EXOS-4.1 exos-4.1; Putative exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41 E CELE_C14A4.5 crn-5; Exosome complex component RRP46 homolog K12590 RRP46; exosome complex component RRP46 E CELE_Y6D11A.1 exos-4.2; Exoribonuclease phosphorolytic domain-containing protein K12587 MTR3; exosome complex component MTR3 E CELE_F31D4.1 exos-7; Exoribonuclease phosphorolytic domain-containing protein K12589 RRP42; exosome complex component RRP42 E CELE_F37C12.13 exos-9; Exosome complex component RRP45 K12586 RRP43; exosome complex component RRP43 D Exosome cofactors E CELE_C04G2.6 dis-3; putative exosome complex exonuclease RRP44 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E CELE_C14A4.4 crn-3; Exosome complex component 10 homolog K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E CELE_Y51H7C.7 Y51H7C.7; Nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1 E CELE_F29A7.6 F29A7.6; Protein F29A7.6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type E CELE_C28H8.3 C28H8.3; putative helicase C28H8.3 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] D TRAMP complex E CELE_ZK858.1 gld-4; Poly(A) RNA polymerase gld-4 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E CELE_W08D2.7 mtr-4; mRNA transport homolog 4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E CELE_F01G4.3 skih-2; Helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] D Ccr4-NOT complex E CELE_ZC518.3 ccr-4; poly(A)-specific ribonuclease K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E CELE_F57B9.2 let-711; CCR4-NOT transcription complex subunit let-711 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E CELE_B0286.4 ntl-2; NOT2/NOT3/NOT5 C-terminal domain-containing protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E CELE_Y56A3A.1 ntl-3; Not3 domain-containing protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E CELE_C49H3.5 ntl-4; CCR4-NOT transcription complex subunit 4 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E CELE_Y56A3A.20 ccf-1; CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E CELE_C26E6.3 ntl-9; CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9 D Pan complex E CELE_F31E3.4 panl-2; PAN (PolyA-specific riboNucLease) subunit K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E CELE_ZK632.7 panl-3; PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E CELE_K10C8.1 parn-1; 3'-5' exoribonuclease parn-1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E CELE_C03C11.2 fog-3; Anti-proliferative protein domain-containing protein K14443 TOB; protein Tob/BTG E CELE_T07A9.5 eri-1; 3'-5' exonuclease eri-1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] E CELE_Y113G7A.9 dcs-1; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E CELE_R17.2 pde-12; Endonuclease/exonuclease/phosphatase domain-containing protein K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E CELE_T01E8.5 nrde-2; Nuclear exosome regulator NRDE2 K26109 NRDE2; nuclear exosome regulator NRDE2 C Other degradation factors D RNases E CELE_C30F12.1 rege-1; Endoribonuclease rege-1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E CELE_F26E4.10 drsh-1; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] E CELE_C08B6.8 C08B6.8; putative oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E CELE_T21B10.2 enol-1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E CELE_BE0003N10.1 BE0003N10.1; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E CELE_C50F4.2 pfk-1.2; ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] E CELE_Y71H10A.1 pfk-1.1; ATP-dependent 6-phosphofructokinase 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E CELE_C37H5.8 hsp-6; Heat shock protein hsp-6 K04043 dnaK; molecular chaperone DnaK E CELE_Y22D7AL.5 hsp-60; Chaperonin homolog Hsp-60, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E CELE_Y73B6BL.3 exos-2; Exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4 E CELE_Y48A6B.5 exos-1; Exosome complex component CSL4 homolog K07573 CSL4; exosome complex component CSL4 D Cofactors E CELE_EXOS-4.1 exos-4.1; Putative exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41 E CELE_F31D4.1 exos-7; Exoribonuclease phosphorolytic domain-containing protein K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024