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Transcription Machinery - Caldicellulosiruptor hydrothermalis
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E Calhy_1031 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E Calhy_1883 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E Calhy_1882 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E Calhy_0630 conserved hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
E Calhy_1700 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E Calhy_1956 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
E Calhy_0422 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
E Calhy_1049 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Calhy_2232 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Calhy_2228 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03090 sigB; RNA polymerase sigma-B factor
E Calhy_1899 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E Calhy_1900 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E Calhy_1943 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E Calhy_1070 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E Calhy_0715 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
E Calhy_0612 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E Calhy_1687 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E Calhy_1729 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
E Calhy_1205 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
E Calhy_1435 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E Calhy_2605 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E Calhy_2230 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E Calhy_0124 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E Calhy_2229 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E Calhy_1997 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E Calhy_1673 transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024