+D GENES KO
#
KEGG Orthology (KO) - Campylobacter jejuni subsp. jejuni IA3902
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cji00010]
D CJSA_1451 pgi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJSA_0795 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJSA_0565 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJSA_1332 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJSA_1334 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJSA_1333 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CJSA_0406 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJSA_1583 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJSA_0365 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJSA_1399 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJSA_0503 oorA; 2-oxoglutarate-acceptor oxidoreductase subunit OorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJSA_0504 oorB; 2-oxoglutarate-acceptor oxidoreductase subunit OorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJSA_1105 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJSA_1464 putative NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJSA_1453 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJSA_1338 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJSA_0877 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:cji00020]
D CJSA_1592 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CJSA_0790 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJSA_0498 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CJSA_0503 oorA; 2-oxoglutarate-acceptor oxidoreductase subunit OorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJSA_0504 oorB; 2-oxoglutarate-acceptor oxidoreductase subunit OorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJSA_0505 oorC; 2-oxoglutarate-acceptor oxidoreductase subunit OorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CJSA_0502 oorD; 2-oxoglutarate-acceptor oxidoreductase subunit OorD K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CJSA_0501 sucD; succinyl-coA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJSA_0500 sucC; succinyl-coA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJSA_0410 sdhB; succinate dehydrogenase, iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJSA_0411 sdhB; succinate dehydrogenase, subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJSA_0382 frdA; fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJSA_0383 frdB; fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJSA_0381 frdC; fumarate reductase cytochrome b-556 subunit K25996 frdC; succinate dehydrogenase subunit C
D CJSA_1298 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CJSA_0499 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJSA_0366 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CJSA_0980 pycA; acetyl-CoA carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D CJSA_0878 pycB; putative pyruvate carboxylase B subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D CJSA_0877 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CJSA_1399 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cji00030]
D CJSA_1451 pgi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJSA_0421 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CJSA_1557 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CJSA_0257 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CJSA_0870 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CJSA_1338 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJSA_0863 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CJSA_0388 putative GMC oxidoreductase subunit K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D CJSA_0387 putative oxidoreductase subunit K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D CJSA_0565 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJSA_0795 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:cji00040]
D CJSA_0452 uxaA; putative altronate hydrolase N-terminus K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D CJSA_0453 uxaA; putative altronate hydrolase C-terminus K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D CJSA_1452 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJSA_0421 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:cji00051]
D CJSA_1338 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJSA_0456 short chain dehydrogenase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D CJSA_0451 dapA; putative dihydrodipicolinate synthase K26911 fucH; 2-dehydro-3-deoxy-L-fuconate aldolase [EC:4.1.2.64]
D CJSA_0795 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJSA_0565 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJSA_1332 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJSA_0870 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cji00052]
D CJSA_1073 galE; UDP-GlcNAc/Glc 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJSA_1452 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJSA_1338 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:cji00500]
D CJSA_1452 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJSA_1338 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJSA_1451 pgi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cji00520]
D CJSA_1300 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJSA_0333 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CJSA_0776 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CJSA_0813 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJSA_1587 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJSA_1084 neuC1; putative UDP-N-acetyl-D-glucosamine 2-epimerase K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D CJSA_1083 neuB1; sialic acid synthase (N-acetylneuraminic acid synthetase) K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D CJSA_1085 neuA1; two-domain bifunctional protein (beta-1,4-N-acetylgalactosaminyltransferase/CMP-Neu5Ac synthase) K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D CJSA_0475 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CJSA_1231 pseB; UDP-GlcNAc-specific C4,6 dehydratase/C5 epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CJSA_1232 pseC; C4 aminotransferase specific for PseB product K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]
D CJSA_1251 pseH; N-acetyltransferase specific for PseC product,UDP-4-amino-4,6-dideoxy-beta-L-AltNAc K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D CJSA_1250 pseG; nucleotidase specific for PseC product,UDP-4-amino-4,6-dideoxy-beta-L-AltNAc K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CJSA_1255 pseI; Pse synthetase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CJSA_1249 pseF; putative acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CJSA_1062 pglF; UDP-GlcNAc C4,6 dehydratase K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D CJSA_1063 pglE; UDP-4-keto-6-deoxy-GlcNAc C4 aminotransferase K15910 pglE; UDP-N-acetylbacillosamine transaminase [EC:2.6.1.34]
D CJSA_1065 pglD; acetyltransferase K15913 pglD; UDP-N-acetylbacillosamine N-acetyltransferase [EC:2.3.1.203]
D CJSA_1264 neuC2; putative UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D CJSA_1263 neuB2; N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D CJSA_1267 ptmB; cylneuraminate cytidylyltransferase (flagellin modification) K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D CJSA_1338 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJSA_1452 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJSA_1073 galE; UDP-GlcNAc/Glc 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJSA_1451 pgi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJSA_1258 putative aminotransferase (degT family) K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00620 Pyruvate metabolism [PATH:cji00620]
D CJSA_1453 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJSA_1399 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJSA_0503 oorA; 2-oxoglutarate-acceptor oxidoreductase subunit OorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJSA_0504 oorB; 2-oxoglutarate-acceptor oxidoreductase subunit OorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJSA_1464 putative NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJSA_0653 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJSA_0652 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJSA_0365 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJSA_0415 aacA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJSA_1229 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJSA_1228 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJSA_0118 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJSA_1105 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJSA_1497 putative oxidoreductase K18930 dld; D-lactate dehydrogenase
D CJSA_0461 ald; putative aldehyde dehydrogenase C-terminus K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D CJSA_0765 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CJSA_1225 malate oxidoreductase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CJSA_0980 pycA; acetyl-CoA carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D CJSA_0878 pycB; putative pyruvate carboxylase B subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D CJSA_0499 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJSA_0366 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CJSA_1298 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CJSA_0382 frdA; fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJSA_0383 frdB; fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJSA_0381 frdC; fumarate reductase cytochrome b-556 subunit K25996 frdC; succinate dehydrogenase subunit C
D CJSA_0877 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CJSA_0511 putative membrane protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CJSA_1628 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cji00630]
D CJSA_1453 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJSA_0499 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJSA_1592 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CJSA_0790 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJSA_1151 glcD; glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CJSA_0934 iron-sulfur cluster-binding domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D CJSA_1319 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D CJSA_1171 putative HAD-superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CJSA_1400 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CJSA_0663 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJSA_0375 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJSA_0461 ald; putative aldehyde dehydrogenase C-terminus K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D CJSA_1433 fdhA; putative formate dehydrogenase large subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJSA_1432 fdhB; putative formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CJSA_1431 fdhC; formate dehydrogenase, cytochrome b subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CJSA_0746 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:cji00640]
D CJSA_1453 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJSA_0653 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJSA_0652 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJSA_0415 aacA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJSA_1229 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJSA_1228 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJSA_0118 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJSA_0500 sucC; succinyl-coA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJSA_0501 sucD; succinyl-coA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJSA_0790 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJSA_1105 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cji00650]
D CJSA_0410 sdhB; succinate dehydrogenase, iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJSA_0411 sdhB; succinate dehydrogenase, subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJSA_0382 frdA; fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJSA_0383 frdB; fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJSA_0381 frdC; fumarate reductase cytochrome b-556 subunit K25996 frdC; succinate dehydrogenase subunit C
D CJSA_1399 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJSA_0503 oorA; 2-oxoglutarate-acceptor oxidoreductase subunit OorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJSA_0504 oorB; 2-oxoglutarate-acceptor oxidoreductase subunit OorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJSA_0542 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJSA_0543 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cji00660]
D CJSA_0542 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJSA_0543 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJSA_0500 sucC; succinyl-coA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJSA_0501 sucD; succinyl-coA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJSA_1626 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CJSA_1625 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CJSA_1627 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cji00562]
D CJSA_0119 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CJSA_1332 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cji00190]
D CJSA_1491 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CJSA_1490 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CJSA_1489 nuoC; NADH dehydrogenase I chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CJSA_1488 nuoD; NADH dehydrogenase I chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CJSA_1487 hypothetical protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CJSA_1486 hypothetical protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CJSA_1485 nuoG; putative NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CJSA_1484 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CJSA_1483 nuol; NADH dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CJSA_1482 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CJSA_1481 nuoK; NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CJSA_1480 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CJSA_1479 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CJSA_1478 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CJSA_0410 sdhB; succinate dehydrogenase, iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJSA_0411 sdhB; succinate dehydrogenase, subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJSA_0382 frdA; fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJSA_0383 frdB; fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJSA_0381 frdC; fumarate reductase cytochrome b-556 subunit K25996 frdC; succinate dehydrogenase subunit C
D CJSA_1124 petA; putative ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CJSA_1123 petB; putative ubiquinol-cytochrome C reductase cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJSA_1122 petC; putative ubiquinol-cytochrome C reductase cytochrome C subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CJSA_1413 ccoN; cb-type cytochrome C oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CJSA_1412 ccoO; cb-type cytochrome C oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CJSA_1411 ccoQ; cb-type cytochrome C oxidase subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CJSA_1410 ccoP; cb-type cytochrome C oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CJSA_0074 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CJSA_0075 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CJSA_1093 cytochrome c553 K08738 CYC; cytochrome c
D CJSA_0096 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CJSA_0098 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CJSA_0097 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CJSA_0095 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CJSA_0099 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CJSA_1142 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJSA_0093 atpF'; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJSA_0094 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJSA_0881 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CJSA_0605 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CJSA_1294 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJSA_0572 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cji00680]
D CJSA_1433 fdhA; putative formate dehydrogenase large subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJSA_1432 fdhB; putative formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CJSA_1431 fdhC; formate dehydrogenase, cytochrome b subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CJSA_0375 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJSA_1583 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJSA_0499 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJSA_0565 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJSA_0795 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJSA_0241 molybdopterin containing oxidoreductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D CJSA_0653 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJSA_0652 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJSA_1453 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJSA_0406 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJSA_0837 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJSA_0300 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJSA_0258 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cji00910]
D CJSA_0736 napA; nitrate reductase catalytic subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D CJSA_0739 napB; periplasmic nitrate reductase small subunit (cytochrome C-type protein) K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D CJSA_1292 nrfA; putative periplasmic cytochrome C K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D CJSA_1293 nrfH; putative periplasmic cytochrome C K15876 nrfH; cytochrome c nitrite reductase small subunit
D CJSA_1209 2-nitropropane dioxygenase family oxidoreductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CJSA_0999 carbon-nitrogen family hydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJSA_0663 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJSA_0007 gltB; glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJSA_0009 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CJSA_0214 cynT; carbonic anyhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cji00920]
D CJSA_1521 putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJSA_1591 cysQ; CysQ protein-like protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CJSA_0719 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CJSA_0857 cysM; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cji00061]
D CJSA_0415 aacA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJSA_1229 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJSA_1228 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJSA_0118 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJSA_0413 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CJSA_1242 acpP3; putative acyl carrier protein K02078 acpP; acyl carrier protein
D CJSA_0107 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJSA_0302 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJSA_1241 fabH2; putative 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJSA_0414 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJSA_0407 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJSA_0250 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJSA_1331 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D CJSA_0883 aas; 2-acyl-glycerophospho-ethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:cji00121]
D CJSA_0763 7-alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cji00561]
D CJSA_1464 putative NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJSA_0303 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CJSA_0331 putative glycerol 3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJSA_0486 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CJSA_0234 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:cji00564]
D CJSA_1134 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CJSA_0331 putative glycerol 3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJSA_0486 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CJSA_0234 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CJSA_1286 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CJSA_0883 aas; 2-acyl-glycerophospho-ethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D CJSA_1282 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CJSA_1056 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CJSA_1057 phosphatidylserine decarboxylase-related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CJSA_0802 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CJSA_1009 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CJSA_1522 pgpA; putative phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism [PATH:cji00565]
D CJSA_1286 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D CJSA_1286 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D CJSA_1286 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:cji00592]
D CJSA_1286 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
D CJSA_0860 thioesterase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cji00230]
D CJSA_1338 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJSA_0863 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CJSA_0186 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CJSA_1189 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CJSA_0177 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJSA_0900 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CJSA_0483 purS; phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CJSA_0484 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJSA_1445 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CJSA_0666 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CJSA_0482 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CJSA_0023 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CJSA_0898 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJSA_0872 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CJSA_0267 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJSA_1155 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CJSA_1001 guaB; inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CJSA_0306 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJSA_1308 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CJSA_1304 putative nucleotide phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CJSA_1187 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJSA_1115 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CJSA_0024 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJSA_0208 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CJSA_1211 spoT; putative guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CJSA_0327 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CJSA_1175 phosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CJSA_1421 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CJSA_0606 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJSA_0470 Hit family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D CJSA_1521 putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJSA_0679 transthyretin-like periplasmic protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 00240 Pyrimidine metabolism [PATH:cji00240]
D CJSA_0255 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJSA_1417 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJSA_1040 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CJSA_0236 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CJSA_1133 pyrC2; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CJSA_0760 pyrD; dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CJSA_0210 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CJSA_0354 pyrF; orotidine 5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CJSA_1213 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CJSA_0306 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJSA_0477 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CJSA_0027 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CJSA_0267 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJSA_1224 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CJSA_1230 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CJSA_0024 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJSA_0208 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CJSA_0722 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CJSA_0026 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CJSA_0788 putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cji00250]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJSA_0076 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CJSA_0029 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CJSA_0078 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CJSA_0630 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJSA_0876 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJSA_1421 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CJSA_0023 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CJSA_1040 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CJSA_0007 gltB; glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJSA_0009 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CJSA_1425 putA; putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJSA_0663 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJSA_0255 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJSA_1417 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJSA_0484 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJSA_1300 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJSA_0186 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cji00260]
D CJSA_0550 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJSA_0966 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJSA_0140 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJSA_0125 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CJSA_0768 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CJSA_0375 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJSA_0406 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJSA_0837 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJSA_0300 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJSA_0258 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CJSA_0788 putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D CJSA_1056 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CJSA_1536 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CJSA_0783 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJSA_0323 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CJSA_0322 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cji00270]
D CJSA_0719 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CJSA_0857 cysM; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJSA_1325 metC; putative cystathionine beta-lyase, C-terminus K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CJSA_1139 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJSA_1038 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CJSA_0108 mtnA; 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D CJSA_1155 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CJSA_1136 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CJSA_0568 conserved hypothetical protein K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D CJSA_0550 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJSA_0966 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJSA_0140 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJSA_0246 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJSA_1105 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJSA_0499 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJSA_1536 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CJSA_0837 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJSA_0300 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cji00280]
D CJSA_0246 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cji00290]
D CJSA_0783 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJSA_1626 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CJSA_1625 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CJSA_1627 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CJSA_0542 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJSA_0543 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJSA_0599 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CJSA_0013 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CJSA_0246 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJSA_0511 putative membrane protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CJSA_1628 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cji00300]
D CJSA_0140 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJSA_0550 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJSA_0966 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJSA_0762 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CJSA_0187 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CJSA_1517 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CJSA_0204 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CJSA_0991 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CJSA_1447 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CJSA_0288 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CJSA_1553 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJSA_0751 murF; Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
C 00220 Arginine biosynthesis [PATH:cji00220]
D CJSA_0937 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CJSA_0630 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJSA_0876 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJSA_0484 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJSA_0663 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJSA_0202 acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D CJSA_0203 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CJSA_0201 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CJSA_0204 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cji00330]
D CJSA_0720 speE; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CJSA_0894 peptidyl-arginine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CJSA_0892 carbon-nitrogen family hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CJSA_1436 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CJSA_1098 twin-arginine translocation pathway signal K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D CJSA_1018 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CJSA_1425 putA; putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJSA_0088 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CJSA_0525 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cji00340]
D CJSA_1509 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CJSA_1516 hisI; phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CJSA_1513 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CJSA_1512 hisH; imidazole glycerol phosphate synthase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CJSA_1253 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CJSA_1515 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CJSA_1252 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CJSA_1511 hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CJSA_0291 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJSA_1510 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cji00350]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJSA_0291 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:cji00360]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJSA_0291 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cji00380]
D CJSA_0999 carbon-nitrogen family hydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJSA_1319 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cji00400]
D CJSA_0680 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CJSA_0951 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CJSA_0060 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CJSA_0378 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CJSA_0360 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CJSA_0841 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CJSA_1546 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CJSA_0319 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJSA_0320 trpD; anthranilate synthase component II K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D CJSA_0321 trpF; N-(5phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CJSA_0469 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CJSA_0323 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CJSA_0322 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CJSA_0290 pheA; chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CJSA_0121 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJSA_0291 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cji00410]
D CJSA_0270 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CJSA_1098 twin-arginine translocation pathway signal K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D CJSA_0271 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cji00430]
D CJSA_0652 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJSA_0653 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cji00450]
D CJSA_1325 metC; putative cystathionine beta-lyase, C-terminus K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CJSA_1139 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJSA_0137 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CJSA_0526 pyridine nucleotide-disulphide oxidoreductase family protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CJSA_1521 putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJSA_1426 selD; putative selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CJSA_1312 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CJSA_0793 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cji00460]
D CJSA_0999 carbon-nitrogen family hydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJSA_0029 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CJSA_0375 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cji00470]
D CJSA_0851 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJSA_0754 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJSA_0484 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJSA_1564 murL; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CJSA_0404 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJSA_0076 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CJSA_1447 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CJSA_0288 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cji00480]
D CJSA_1457 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CJSA_0874 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJSA_0923 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CJSA_0498 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:cji00540]
D CJSA_0251 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CJSA_0123 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CJSA_0544 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CJSA_0262 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CJSA_0264 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CJSA_0767 lpxK; tetraacyldisaccharide 4-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CJSA_1368 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CJSA_0357 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CJSA_0614 YrbI family phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CJSA_0769 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CJSA_0671 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CJSA_1076 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CJSA_0233 sulfatase, putative K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJSA_1089 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJSA_1090 hldE; D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D CJSA_1092 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CJSA_1091 hldD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CJSA_1075 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CJSA_1088 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cji00541]
D CJSA_1452 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJSA_1073 galE; UDP-GlcNAc/Glc 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJSA_1258 putative aminotransferase (degT family) K13010 per; perosamine synthetase [EC:2.6.1.102]
D CJSA_0776 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CJSA_1084 neuC1; putative UDP-N-acetyl-D-glucosamine 2-epimerase K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D CJSA_1083 neuB1; sialic acid synthase (N-acetylneuraminic acid synthetase) K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D CJSA_1085 neuA1; two-domain bifunctional protein (beta-1,4-N-acetylgalactosaminyltransferase/CMP-Neu5Ac synthase) K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D CJSA_1231 pseB; UDP-GlcNAc-specific C4,6 dehydratase/C5 epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CJSA_1232 pseC; C4 aminotransferase specific for PseB product K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]
D CJSA_1251 pseH; N-acetyltransferase specific for PseC product,UDP-4-amino-4,6-dideoxy-beta-L-AltNAc K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D CJSA_1250 pseG; nucleotidase specific for PseC product,UDP-4-amino-4,6-dideoxy-beta-L-AltNAc K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CJSA_1255 pseI; Pse synthetase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CJSA_1249 pseF; putative acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CJSA_1062 pglF; UDP-GlcNAc C4,6 dehydratase K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D CJSA_0475 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:cji00550]
D CJSA_0813 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJSA_1587 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJSA_0997 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CJSA_0404 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJSA_1553 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJSA_0754 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJSA_0751 murF; Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CJSA_0779 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CJSA_0196 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJSA_0405 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJSA_0982 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CJSA_0478 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJSA_0619 pbpC; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJSA_0492 pbpB; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:cji00552]
D CJSA_0196 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJSA_1365 tagF; putative CDP glycerol glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cji00543]
D CJSA_0719 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cji00730]
D CJSA_0423 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CJSA_1024 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CJSA_0989 moeB; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D CJSA_0217 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJSA_0987 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CJSA_0295 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CJSA_0988 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CJSA_0986 putative thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CJSA_1023 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CJSA_1382 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CJSA_0606 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJSA_0412 TenA/Thi-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cji00740]
D CJSA_0939 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJSA_0540 ribB; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CJSA_1534 ribD; riboflavin-specific deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CJSA_0356 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CJSA_1156 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CJSA_0557 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CJSA_0724 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cji00750]
D CJSA_0300 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJSA_1177 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CJSA_1176 pdxJ; pyridoxine 5-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CJSA_0768 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cji00760]
D CJSA_0207 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CJSA_0267 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJSA_1335 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CJSA_0766 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CJSA_1005 competence/damage-inducible domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CJSA_0993 npdA; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CJSA_0608 pnk; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cji00770]
D CJSA_0542 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJSA_0543 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJSA_0599 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CJSA_0013 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CJSA_0272 panB; 3-methyl-2-oxobutanoate K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CJSA_0271 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CJSA_0367 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CJSA_0777 dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CJSA_0723 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CJSA_1446 coaE; putative dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CJSA_1340 acpS; 4-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CJSA_0246 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJSA_0270 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:cji00780]
D CJSA_0278 bioC; biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CJSA_0414 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJSA_0407 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJSA_0250 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJSA_1331 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJSA_0279 conserved hypothetical protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D CJSA_0280 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJSA_0281 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CJSA_0282 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CJSA_1594 bioB; putative biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CJSA_0090 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:cji00790]
D CJSA_0184 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CJSA_0669 conserved hypothetical protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D CJSA_0330 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CJSA_0059 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CJSA_0553 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CJSA_1030 folC; olylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CJSA_0939 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJSA_0540 ribB; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CJSA_0815 pabA; para-aminobenzoate synthase glutamine amidotransferase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D CJSA_0816 pabB; para-aminobenzoate synthase glutamine amidotransferase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CJSA_0150 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CJSA_0151 radical SAM domain-containing protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CJSA_0016 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CJSA_1631 putative GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CJSA_0152 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJSA_0229 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CJSA_1439 moaE; putative molybdopterin converting factor,subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CJSA_0689 mogA; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CJSA_1440 moaA2; putative molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CJSA_0812 moeA; putative molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CJSA_1285 mobA; putative molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cji00670]
D CJSA_0810 folD; folD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CJSA_0375 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJSA_0177 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJSA_0898 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJSA_0089 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJSA_0026 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CJSA_0746 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CJSA_1140 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CJSA_1146 putative 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cji00860]
D CJSA_0800 gltX; glutamylglutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_1226 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_0509 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CJSA_0808 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CJSA_0938 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CJSA_0512 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CJSA_1022 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CJSA_1181 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CJSA_0935 hemN; coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D CJSA_0335 putative integral membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CJSA_0473 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CJSA_1525 putative pyridoxamine 5-phosphate oxidase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cji00130]
D CJSA_0155 ubiA; prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CJSA_0513 ubiD; putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D CJSA_0724 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CJSA_0298 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CJSA_1223 conserved hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D CJSA_1302 hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D CJSA_0061 chlorohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D CJSA_0108 mtnA; 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D CJSA_0432 conserved hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D CJSA_1585 conserved hypothetical protein K11785 mqnD; 1,4-dihydroxy-6-naphthoate synthase [EC:1.14.-.-]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cji00900]
D CJSA_0295 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CJSA_1281 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CJSA_1519 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D CJSA_1046 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CJSA_0650 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CJSA_0840 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CJSA_0724 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CJSA_1556 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CJSA_0508 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CJSA_0779 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CJSA_1557 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:cji01054]
D CJSA_0076 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cji00332]
D CJSA_0088 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CJSA_0525 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cji00261]
D CJSA_1521 putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJSA_0550 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJSA_0966 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJSA_0762 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CJSA_0187 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cji00521]
D CJSA_1338 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJSA_0119 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:cji00401]
D CJSA_0121 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJSA_0291 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CJSA_0319 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CJSA_0107 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJSA_0407 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJSA_1331 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CJSA_0413 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CJSA_1242 acpP3; putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cji00999]
D CJSA_1038 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CJSA_0378 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D CJSA_0247 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJSA_1194 putative isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation [PATH:cji00627]
D CJSA_0999 carbon-nitrogen family hydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJSA_0724 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D CJSA_0247 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJSA_1194 putative isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D CJSA_0999 carbon-nitrogen family hydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CJSA_0247 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJSA_1194 putative isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cji03020]
D CJSA_0448 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJSA_0449 rpoC; DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJSA_1507 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJSA_1212 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cji03010]
D CJSA_0839 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CJSA_1120 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CJSA_1610 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CJSA_1506 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CJSA_1599 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CJSA_1012 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CJSA_0463 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CJSA_1602 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CJSA_1402 rpsl; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CJSA_1617 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CJSA_1505 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CJSA_0462 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CJSA_1504 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CJSA_1603 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CJSA_0831 rspO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CJSA_0674 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CJSA_1607 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CJSA_1014 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CJSA_1612 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CJSA_1523 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CJSA_0343 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CJSA_0445 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CJSA_1613 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CJSA_1616 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CJSA_1615 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CJSA_1604 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CJSA_1601 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CJSA_0447 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CJSA_0629 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CJSA_0446 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CJSA_0444 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CJSA_1403 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CJSA_1606 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CJSA_1598 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CJSA_1609 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CJSA_1508 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CJSA_1600 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CJSA_0678 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CJSA_0222 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CJSA_0085 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CJSA_1611 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CJSA_1614 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CJSA_1605 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CJSA_0285 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D CJSA_0086 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CJSA_0420 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CJSA_1608 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CJSA_0146 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CJSA_0304 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CJSA_0441 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CJSA_0906 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CJSA_0221 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CJSA_1503 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CJSA_Cj16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJSA_Cj23SAC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJSA_Cj23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJSA_Cj5SB 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJSA_Cj5SC 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJSA_Cj5SA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cji00970]
D CJSA_t0043 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJSA_t0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJSA_t0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJSA_t0004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJSA_t0037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJSA_t0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJSA_t0011 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJSA_t0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJSA_t0027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CJSA_t0019 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJSA_t0023 tRNA-Val K14221 tRNA-Asp; tRNA Asp
D CJSA_t0034 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CJSA_t0013 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJSA_t0003 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJSA_t0021 tRNA-Arg K14224 tRNA-Glu; tRNA Glu
D CJSA_t0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJSA_t0032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJSA_t0008 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJSA_t0039 tRNA-His K14226 tRNA-His; tRNA His
D CJSA_t0002 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJSA_t0005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJSA_t0015 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJSA_t0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJSA_t0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJSA_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJSA_t0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJSA_t0022 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJSA_t0025 tRNA-Leu K14229 tRNA-Lys; tRNA Lys
D CJSA_t0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJSA_t0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJSA_t0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJSA_t0029 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CJSA_t0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJSA_t0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJSA_t0030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJSA_t0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJSA_t0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJSA_t0009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJSA_t0010 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CJSA_t0007 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CJSA_t0044 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJSA_t0020 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJSA_t0024 tRNA-Lys K14237 tRNA-Val; tRNA Val
D CJSA_t0031 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CJSA_0800 gltX; glutamylglutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_1226 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_1002 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CJSA_1135 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CJSA_0371 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CJSA_0476 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJSA_0607 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJSA_0668 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJSA_1172 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJSA_0197 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJSA_0362 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJSA_1312 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CJSA_0758 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJSA_0793 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJSA_0089 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJSA_0731 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJSA_1033 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJSA_1004 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJSA_0374 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJSA_1113 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJSA_0510 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJSA_0721 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJSA_0843 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJSA_0842 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJSA_1210 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJSA_0361 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cji03060]
D CJSA_1597 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CJSA_0442 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJSA_0212 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJSA_1035 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CJSA_1034 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CJSA_1036 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJSA_0903 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJSA_0887 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJSA_0673 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJSA_CjSRP1 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CJSA_1144 ftsY; putative signal recognition particle protein K03110 ftsY; fused signal recognition particle receptor
D CJSA_1114 tatA; Sec-independent protein translocase (TatA/E-like protein) K03116 tatA; sec-independent protein translocase protein TatA
D CJSA_0547 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CJSA_0546 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CJSA_0811 lepP; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJSA_0334 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cji04122]
D CJSA_0217 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJSA_0047 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJSA_1545 putative ATP-binding protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJSA_1439 moaE; putative molybdopterin converting factor,subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CJSA_0152 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJSA_1438 moaD; putative molybdopterin converting factor,subunit 1 K03636 moaD; sulfur-carrier protein
D CJSA_0229 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CJSA_0689 mogA; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CJSA_0990 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D CJSA_0989 moeB; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cji03018]
D CJSA_0549 nidH; dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CJSA_1583 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJSA_1192 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CJSA_0598 putative ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJSA_1096 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CJSA_1147 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CJSA_1619 putative metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CJSA_0715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJSA_1159 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJSA_1294 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJSA_0572 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cji03030]
D CJSA_0422 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJSA_0682 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJSA_1097 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJSA_0552 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJSA_0597 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJSA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJSA_0529 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CJSA_1550 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJSA_1013 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_pVir0014 ssb; putative single stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_1548 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CJSA_0010 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CJSA_0554 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cji03410]
D CJSA_0563 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CJSA_0077 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CJSA_1532 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CJSA_0908 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJSA_0232 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJSA_0028 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJSA_0554 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cji03420]
D CJSA_1027 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CJSA_0316 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJSA_0644 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CJSA_1184 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CJSA_0733 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJSA_1043 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJSA_0554 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cji03430]
D CJSA_0995 mutS; recombination and DNA strand exchange inhibitor K07456 mutS2; DNA mismatch repair protein MutS2
D CJSA_0733 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJSA_1043 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJSA_0299 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CJSA_1000 putative exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CJSA_0028 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJSA_1013 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_pVir0014 ssb; putative single stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_0682 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJSA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJSA_1097 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJSA_0597 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJSA_0552 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJSA_0422 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJSA_0554 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cji03440]
D CJSA_0028 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJSA_1013 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_pVir0014 ssb; putative single stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_1202 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CJSA_1584 recA; recA protein K03553 recA; recombination protein RecA
D CJSA_0755 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CJSA_1296 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CJSA_1633 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CJSA_0434 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CJSA_1404 putative recombination protein RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CJSA_0682 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJSA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJSA_1097 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJSA_0597 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJSA_0552 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJSA_0422 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJSA_0648 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cji02010]
D CJSA_1456 putative tungsten ABC-transport system periplamic substrate binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CJSA_1455 putativetungsten ABC-transport system permease protein K05773 tupB; tungstate transport system permease protein
D CJSA_1454 putative tungsten ABC-transport system ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CJSA_0277 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CJSA_0275 modB; molybdate transport system permease protein K02018 modB; molybdate transport system permease protein
D CJSA_0274 modC; molybdate transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CJSA_0165 iron ABC transporter, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CJSA_0164 iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CJSA_0163 iron ABC transporter, ATP binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CJSA_1306 putative periplasmic toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CJSA_1560 putative ABC transport system periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJSA_1558 iamB; putative ABC transport system permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJSA_1559 iamA; putative ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CJSA_0581 pstS; phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CJSA_0582 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D CJSA_0583 pstA; phosphate ABC transporter, permease protein PstA, putative K02038 pstA; phosphate transport system permease protein
D CJSA_0584 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CJSA_0866 peb1A; bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D CJSA_0864 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJSA_0865 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJSA_0867 pebC; amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CJSA_0698 hisJ; histidine-binding protein precursor K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CJSA_0847 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D CJSA_0848 glnQ; amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CJSA_0961 livK; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJSA_0962 livJ; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJSA_0960 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CJSA_0959 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CJSA_0958 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJSA_0957 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJSA_0726 NLPA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CJSA_0727 NLPA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CJSA_0728 NLPA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CJSA_1138 putative NLPA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CJSA_0729 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D CJSA_0730 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CJSA_0134 cation ABC transporter, periplasmic cation-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CJSA_0132 cation ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CJSA_0133 cation ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CJSA_1370 kpsE; capsular polysaccharide ABC transporter K10107 kpsE; capsular polysaccharide transport system permease protein
D CJSA_1372 kpsM; capsular polysaccharide ABC transporter, permease protein K09688 kpsM; capsular polysaccharide transport system permease protein
D CJSA_1371 kpsT; capsular polysaccharide ABC transporter, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CJSA_0781 putative integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D CJSA_0287 putative integral membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D CJSA_0633 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CJSA_1215 putative integral membrane protein K09811 ftsX; cell division transport system permease protein
D CJSA_1216 putative ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CJSA_0759 msbA; lipid export ABC transport protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CJSA_0575 ABC-type transmembrane transport protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CJSA_1499 putative ABC transporter ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:cji03070]
D CJSA_0974 cmeD; outer membrane component of efflux system (multidrug efflux system CmeDEF) K12340 tolC; outer membrane protein
D CJSA_1397 ctsD; general secretory pathway protein D K02453 gspD; general secretion pathway protein D
D CJSA_1393 general secretory pathway protein F K02455 gspF; general secretion pathway protein F
D CJSA_0647 putative periplasmic protein K02456 gspG; general secretion pathway protein G
D CJSA_1278 putative periplasmic protein K02456 gspG; general secretion pathway protein G
D CJSA_1394 ctsE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CJSA_1035 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CJSA_1034 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CJSA_0442 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJSA_0212 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJSA_1597 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CJSA_1036 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJSA_0903 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJSA_0887 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJSA_1144 ftsY; putative signal recognition particle protein K03110 ftsY; fused signal recognition particle receptor
D CJSA_0673 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJSA_1114 tatA; Sec-independent protein translocase (TatA/E-like protein) K03116 tatA; sec-independent protein translocase protein TatA
D CJSA_0547 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CJSA_0546 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CJSA_pVir0001 virB8; VirB8 K03203 virB8; type IV secretion system protein VirB8
D CJSA_pVir0003 virB10; VirB10 K03195 virB10; type IV secretion system protein VirB10
D CJSA_pVir0005 trbB; conjugative transfer regulon protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D CJSA_pVir0007 virD4; VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cji02020]
D CJSA_0581 pstS; phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CJSA_1166 htrA; serine protease (protease DO) K04771 degP; serine protease Do [EC:3.4.21.107]
D CJSA_0684 flaC; flagellin subunit protein FlaC K02406 fliC; flagellin
D CJSA_1273 flaB; flagellin K02406 fliC; flagellin
D CJSA_1274 flaA; flagellin K02406 fliC; flagellin
D CJSA_0055 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D CJSA_0311 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CJSA_0642 kdpD; truncated KdpD protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CJSA_0638 kdpB; putative potassium-transporting ATPase subunit B N-terminus K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CJSA_0640 kdpB; putative potassium-transporting ATPase subunit B C-terminus K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CJSA_0641 kdpC; potassium-transporting ATPase, C subunit, putative K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CJSA_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJSA_0635 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CJSA_1045 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CJSA_1301 putative nucleotidyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CJSA_0663 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJSA_1130 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJSA_0634 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D CJSA_1204 hydC; Ni/Fe-hydrogenase B-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D CJSA_0868 cheR; putative MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJSA_0019 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0239 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_1428 putative MCP-type signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_1476 putative methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0259 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CJSA_0260 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJSA_1060 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJSA_0869 cheB; putative MCP protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJSA_0261 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJSA_1124 petA; putative ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CJSA_1123 petB; putative ubiquinol-cytochrome C reductase cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJSA_1122 petC; putative ubiquinol-cytochrome C reductase cytochrome C subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CJSA_1093 cytochrome c553 K08738 CYC; cytochrome c
D CJSA_1413 ccoN; cb-type cytochrome C oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CJSA_1412 ccoO; cb-type cytochrome C oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CJSA_1411 ccoQ; cb-type cytochrome C oxidase subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CJSA_1410 ccoP; cb-type cytochrome C oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CJSA_0074 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CJSA_0075 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CJSA_0974 cmeD; outer membrane component of efflux system (multidrug efflux system CmeDEF) K12340 tolC; outer membrane protein
D CJSA_1197 putative phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CJSA_1124 petA; putative ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cji02024]
D CJSA_1136 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CJSA_0319 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJSA_0680 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CJSA_0691 ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CJSA_0695 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CJSA_0694 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CJSA_0696 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CJSA_0961 livK; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJSA_0962 livJ; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJSA_0960 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CJSA_0959 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CJSA_0958 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJSA_0957 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJSA_0939 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJSA_1534 ribD; riboflavin-specific deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CJSA_0338 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJSA_0903 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJSA_0442 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJSA_0212 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJSA_1597 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CJSA_1036 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJSA_0887 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJSA_1144 ftsY; putative signal recognition particle protein K03110 ftsY; fused signal recognition particle receptor
D CJSA_0673 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cji02030]
D CJSA_0019 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0239 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_1428 putative MCP-type signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_1476 putative methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0260 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJSA_0259 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CJSA_1060 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJSA_0869 cheB; putative MCP protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJSA_0261 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJSA_0868 cheR; putative MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJSA_0293 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D CJSA_0054 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJSA_0053 fliY; flagellar motor switch protein FliY K02417 fliN; flagellar motor switch protein FliN
D CJSA_0325 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CJSA_0311 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CJSA_0310 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CJSA_0567 putative OmpA family membrane protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cji02040]
D CJSA_0493 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJSA_0292 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CJSA_0293 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D CJSA_0294 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D CJSA_0185 flil; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJSA_0041 conserved hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D CJSA_1339 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CJSA_0054 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJSA_0053 fliY; flagellar motor switch protein FliY K02417 fliN; flagellar motor switch protein FliN
D CJSA_0325 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CJSA_0775 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJSA_1586 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D CJSA_1117 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJSA_0829 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJSA_0309 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJSA_0725 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CJSA_0495 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CJSA_0494 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CJSA_0042 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CJSA_0043 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D CJSA_1632 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CJSA_0661 flgG2; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CJSA_0662 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CJSA_0651 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D CJSA_1386 flgI; lagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D CJSA_1387 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CJSA_1390 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CJSA_0833 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D CJSA_0969 putative lipoprotein K09860 flgP; outer membrane protein FlgP
D CJSA_0968 hypothetical protein K24346 flgQ; flagellar motility protein FlgQ
D CJSA_0684 flaC; flagellin subunit protein FlaC K02406 fliC; flagellin
D CJSA_1273 flaB; flagellin K02406 fliC; flagellin
D CJSA_1274 flaA; flagellin K02406 fliC; flagellin
D CJSA_0515 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D CJSA_0516 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CJSA_0311 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CJSA_0310 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CJSA_0567 putative OmpA family membrane protein K02557 motB; chemotaxis protein MotB
D CJSA_0944 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CJSA_0634 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D CJSA_0055 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CJSA_1583 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cji01501]
D CJSA_0340 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJSA_0339 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJSA_0338 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJSA_0974 cmeD; outer membrane component of efflux system (multidrug efflux system CmeDEF) K12340 tolC; outer membrane protein
D CJSA_0478 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJSA_0619 pbpC; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJSA_0492 pbpB; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJSA_0273 putative periplasmic beta-lactamase K19210 blaOXA-61; beta-lactamase class D OXA-61 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:cji01502]
D CJSA_0754 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJSA_0851 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJSA_0751 murF; Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CJSA_0405 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJSA_0982 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cji01503]
D CJSA_0233 sulfatase, putative K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJSA_1208 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJSA_1166 htrA; serine protease (protease DO) K04771 degP; serine protease Do [EC:3.4.21.107]
D CJSA_0340 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJSA_0339 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJSA_0974 cmeD; outer membrane component of efflux system (multidrug efflux system CmeDEF) K12340 tolC; outer membrane protein
D CJSA_0251 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cji01000]
C 01001 Protein kinases [BR:cji01001]
D CJSA_0642 kdpD; truncated KdpD protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CJSA_1160 dccS; two-component sensor (histidine kinase) K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJSA_1164 two-component sensor (histidine kinase) K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJSA_1201 racS; two-component sensor (histidine kinase) K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJSA_0749 flgS; sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CJSA_0260 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cji01009]
D CJSA_0488 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D CJSA_0258 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cji01002]
D CJSA_0334 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CJSA_0780 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJSA_1203 hydD; putative hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CJSA_1187 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJSA_1348 putative amidotransferase K23150 E3.5.1.129; N5-(cytidine 5'-diphosphoramidyl)-L-glutamine hydrolase [EC:3.5.1.129]
D CJSA_1565 nlpC; putative lipoprotein nlpC K13695 nlpC; probable lipoprotein NlpC
D CJSA_0186 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CJSA_0007 gltB; glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJSA_1300 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJSA_0845 thiJ; 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CJSA_1041 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CJSA_0874 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJSA_0991 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CJSA_0923 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CJSA_0928 hipO; hippurate hydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D CJSA_1563 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CJSA_0620 M24 family peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CJSA_1058 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJSA_0948 putative membrane bound ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJSA_1010 membrane-associated zinc metalloprotease, putative K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CJSA_1166 htrA; serine protease (protease DO) K04771 degP; serine protease Do [EC:3.4.21.107]
D CJSA_0182 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CJSA_1015 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CJSA_0811 lepP; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJSA_0481 ctpA; carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CJSA_0062 sppA; signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D CJSA_0628 hslV; ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CJSA_0665 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cji01003]
D CJSA_0478 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJSA_1067 pglA; GalNAc transferase K15914 pglA; N,N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase [EC:2.4.1.290]
D CJSA_1071 pglH; GalNAc transferase/polymerase K17249 pglH; GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase [EC:2.4.1.292]
D CJSA_1070 pgll; glucosyl transferase K17250 pglI; GalNAc5-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase [EC:2.4.1.293]
D CJSA_1069 pglJ; GalNAc transferase K17248 pglJ; N-acetylgalactosamine-N,N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase [EC:2.4.1.291]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cji01005]
D CJSA_0251 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CJSA_0264 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CJSA_0123 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CJSA_0544 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CJSA_0262 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CJSA_0767 lpxK; tetraacyldisaccharide 4-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CJSA_1076 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CJSA_0671 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CJSA_0233 sulfatase, putative K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJSA_0357 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CJSA_0769 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CJSA_0614 YrbI family phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CJSA_1368 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CJSA_1075 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CJSA_1088 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CJSA_1089 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJSA_1092 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CJSA_1090 hldE; D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D CJSA_1091 hldD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cji01011]
D CJSA_0813 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJSA_1587 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJSA_0997 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CJSA_0404 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJSA_1553 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJSA_0754 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJSA_0851 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJSA_1564 murL; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CJSA_0405 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJSA_0982 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CJSA_0196 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJSA_0757 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CJSA_0478 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJSA_0619 pbpC; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJSA_0492 pbpB; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJSA_0798 soluble lytic murein transglycosylase, putative K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJSA_0612 putative secreted transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CJSA_0496 putative aminodeoxychorismate lyase family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CJSA_0613 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJSA_1208 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cji01004]
D CJSA_0107 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJSA_0302 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJSA_1241 fabH2; putative 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJSA_0414 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJSA_0407 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJSA_0250 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJSA_1331 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJSA_0860 thioesterase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CJSA_1453 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJSA_0303 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CJSA_0331 putative glycerol 3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJSA_0486 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cji01008]
D CJSA_0076 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:cji01006]
D CJSA_1556 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CJSA_0508 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CJSA_0779 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CJSA_0156 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CJSA_0155 ubiA; prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:cji01007]
D CJSA_0800 gltX; glutamylglutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_1226 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_1210 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJSA_0361 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CJSA_0758 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJSA_1113 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJSA_0793 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJSA_1004 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJSA_0731 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJSA_1033 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJSA_0374 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJSA_0607 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJSA_0721 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJSA_0668 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJSA_1172 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJSA_0362 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJSA_0510 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJSA_0197 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJSA_0476 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJSA_0843 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJSA_0842 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJSA_0718 aspB; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJSA_0141 aspartate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CJSA_0291 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJSA_0280 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJSA_0204 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CJSA_0281 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CJSA_0808 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CJSA_0246 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJSA_0816 pabB; para-aminobenzoate synthase glutamine amidotransferase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CJSA_0300 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJSA_0475 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CJSA_1258 putative aminotransferase (degT family) K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cji00194]
D CJSA_0099 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CJSA_0098 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CJSA_0097 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CJSA_0096 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CJSA_0095 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CJSA_0093 atpF'; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJSA_0094 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJSA_0881 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CJSA_1142 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cji03000]
D CJSA_0341 cmeR; TetR family transcriptional regulator K18992 cmeR; TetR/AcrR family transcriptional regulator, cmeABC operon repressor
D CJSA_1168 hspR; heat shock transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CJSA_0373 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CJSA_0296 perR; FUR family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CJSA_1474 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJSA_0090 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CJSA_1425 putA; putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJSA_1163 putative hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D CJSA_0480 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CJSA_0092 ParB family chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJSA_0713 hcrA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D CJSA_0412 TenA/Thi-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CJSA_0116 dksA-like protein K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:cji03021]
D CJSA_1507 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJSA_0448 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJSA_0449 rpoC; DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJSA_1212 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CJSA_0944 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CJSA_0634 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D CJSA_0055 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D CJSA_0430 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CJSA_0355 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D CJSA_0443 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CJSA_0116 dksA-like protein K06204 dksA; RNA polymerase-binding transcription factor
D CJSA_0263 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CJSA_1096 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cji03019]
D CJSA_1547 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJSA_1619 putative metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CJSA_1147 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CJSA_0598 putative ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJSA_1583 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJSA_1192 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CJSA_1096 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CJSA_0715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJSA_1159 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJSA_1294 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJSA_0572 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CJSA_0549 nidH; dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CJSA_1045 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:cji03011]
D CJSA_0839 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CJSA_1120 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CJSA_1610 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CJSA_1506 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CJSA_1599 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CJSA_1012 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CJSA_0463 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CJSA_1602 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CJSA_1402 rpsl; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CJSA_1617 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CJSA_1505 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CJSA_0462 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CJSA_1504 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CJSA_1603 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CJSA_0831 rspO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CJSA_0674 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CJSA_1607 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CJSA_1014 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CJSA_1612 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CJSA_1523 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CJSA_0343 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CJSA_0445 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CJSA_1613 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CJSA_1616 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CJSA_1615 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CJSA_1604 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CJSA_1601 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CJSA_0629 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CJSA_0446 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CJSA_0444 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CJSA_0447 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CJSA_1403 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CJSA_1606 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CJSA_1598 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CJSA_1609 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CJSA_1508 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CJSA_1600 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CJSA_0678 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CJSA_0222 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CJSA_0085 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CJSA_1611 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CJSA_1614 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CJSA_1605 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CJSA_0086 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CJSA_0420 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CJSA_1608 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CJSA_0146 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CJSA_0304 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CJSA_0441 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CJSA_0906 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CJSA_0221 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CJSA_1503 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CJSA_0285 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D CJSA_Cj5SB 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJSA_Cj5SC 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJSA_Cj5SA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJSA_Cj16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJSA_Cj23SAC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJSA_Cj23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cji03009]
D CJSA_1547 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJSA_0626 era; GTP-binding protein Era K03595 era; GTPase
D CJSA_0087 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D CJSA_0116 dksA-like protein K06204 dksA; RNA polymerase-binding transcription factor
D CJSA_0430 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CJSA_0355 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D CJSA_0443 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CJSA_1620 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CJSA_0147 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CJSA_0940 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CJSA_0657 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CJSA_0145 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CJSA_0556 tlyA; putative hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CJSA_0144 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CJSA_0117 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CJSA_1622 putative radical SAM domain protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CJSA_1618 putative ribosomal pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CJSA_0022 RNA pseudouridylate synthase family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJSA_0672 putative ribosomal pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJSA_1219 putative ribosomal pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJSA_0676 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CJSA_1378 putative radical SAM domain family protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CJSA_1059 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CJSA_0602 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CJSA_0359 engA; GTP-binding protein EngA K03977 engA; GTPase
D CJSA_1211 spoT; putative guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CJSA_0128 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CJSA_0129 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CJSA_1336 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D CJSA_0112 putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D CJSA_0875 GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:cji03016]
D CJSA_0745 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CJSA_0800 gltX; glutamylglutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_1226 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_0510 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJSA_1004 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJSA_1033 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJSA_0793 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJSA_1113 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJSA_0374 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJSA_0607 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJSA_0476 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJSA_0197 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJSA_0362 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJSA_0758 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJSA_0731 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJSA_0721 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJSA_0843 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJSA_0842 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJSA_1210 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJSA_0361 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CJSA_0844 putative histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CJSA_1217 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CJSA_0782 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CJSA_1044 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CJSA_1381 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D CJSA_0217 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJSA_0156 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CJSA_0901 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CJSA_1126 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CJSA_1426 selD; putative selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CJSA_1591 cysQ; CysQ protein-like protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CJSA_0905 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CJSA_CjrnpB1 rnpB; RNA component of RNase P K01978 rnpB; M1 RNA
D CJSA_0668 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJSA_1172 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJSA_0114 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CJSA_0428 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CJSA_0558 putative SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CJSA_0919 putative methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D CJSA_0786 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D CJSA_0677 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CJSA_0850 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CJSA_0466 putative methyltransferase domain protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CJSA_0047 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJSA_1545 putative ATP-binding protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJSA_0109 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CJSA_1207 mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D CJSA_0545 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CJSA_0016 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CJSA_0150 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CJSA_0151 radical SAM domain-containing protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CJSA_1631 putative GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CJSA_0249 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D CJSA_0471 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CJSA_0953 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CJSA_1377 tilS; putative tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CJSA_0124 putative glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CJSA_1279 putative DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CJSA_0632 putative ATP/GTP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CJSA_0268 ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CJSA_0598 putative ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJSA_1192 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cji03012]
D CJSA_0127 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CJSA_0198 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CJSA_1119 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CJSA_0440 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJSA_0464 fusA; elongation factor G K02355 fusA; elongation factor G
D CJSA_1313 selB; putative selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D CJSA_1524 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CJSA_0211 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CJSA_0686 HemK family modification methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CJSA_0286 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CJSA_1502 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CJSA_0518 efp; elongation factor P K02356 efp; elongation factor P
D CJSA_1379 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cji03110]
D CJSA_1050 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CJSA_0479 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CJSA_0252 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CJSA_0627 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CJSA_0488 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D CJSA_0715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJSA_1159 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJSA_1199 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CJSA_0977 adenylosuccinate lyase K03686 dnaJ; molecular chaperone DnaJ
D CJSA_1167 cbpA; co-chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein
D CJSA_0899 DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein
D CJSA_0714 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CJSA_1158 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D CJSA_1166 htrA; serine protease (protease DO) K04771 degP; serine protease Do [EC:3.4.21.107]
D CJSA_1058 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJSA_0948 putative membrane bound ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJSA_1142 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJSA_0854 putative periplasmic protein K09796 pccA; periplasmic copper chaperone A
D CJSA_0595 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CJSA_0591 hypB; hydrogenase isoenzymes formation protein K04652 hypB; hydrogenase nickel incorporation protein HypB
D CJSA_1109 ppi; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CJSA_0658 putative periplasmic protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CJSA_0106 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CJSA_0564 peb4; major antigenic peptide PEB-cell binding facto K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CJSA_0138 trxA; thioredoxin K03671 TXN; thioredoxin
D CJSA_1314 putative periplasmic protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJSA_0571 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:cji04131]
D CJSA_0306 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJSA_1334 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJSA_0365 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJSA_0488 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cji03051]
D CJSA_0488 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cji03032]
D CJSA_1548 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CJSA_0858 hupB; DNA-binding protein HU-like protein K03530 hupB; DNA-binding protein HU-beta
D CJSA_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJSA_0529 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CJSA_1550 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJSA_1013 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_pVir0014 ssb; putative single stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_0682 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJSA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJSA_0597 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJSA_0552 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJSA_0422 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJSA_1097 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJSA_0010 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CJSA_0554 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJSA_0970 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CJSA_0003 gyrB; DNA gyrase B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CJSA_1595 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJSA_pVir0012 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cji03036]
D CJSA_1547 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJSA_0858 hupB; DNA-binding protein HU-like protein K03530 hupB; DNA-binding protein HU-beta
D CJSA_1167 cbpA; co-chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein
D CJSA_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJSA_1450 putative bacterioferritin K04047 dps; starvation-inducible DNA-binding protein
D CJSA_0659 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CJSA_1216 putative ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CJSA_0492 pbpB; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJSA_0832 ftsK; putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CJSA_0981 putative cell division/peptidoglycan biosynthesis protein K03588 ftsW; cell division protein FtsW
D CJSA_1215 putative integral membrane protein K09811 ftsX; cell division transport system permease protein
D CJSA_0660 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJSA_1208 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJSA_0340 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJSA_0253 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJSA_0254 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CJSA_1220 mrdB; RodA protein-like protein K05837 rodA; rod shape determining protein RodA
D CJSA_0091 ParA family chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D CJSA_pVir0024 putative plasmid partioning ParA protein K03496 parA; chromosome partitioning protein
D CJSA_0092 ParB family chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJSA_1126 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CJSA_0940 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CJSA_0817 xerD; DNA recombinase K04763 xerD; integrase/recombinase XerD
D CJSA_1518 mrp; putative ATP/GTP-binding protein (Mrp protein-like protein) K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CJSA_0617 engB; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cji03400]
D CJSA_0791 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CJSA_0077 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CJSA_1532 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CJSA_0563 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CJSA_0908 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJSA_0232 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJSA_0028 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJSA_0554 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJSA_0316 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJSA_0644 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CJSA_1184 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CJSA_0733 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJSA_1043 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJSA_0448 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJSA_0449 rpoC; DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJSA_1507 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJSA_1212 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CJSA_1027 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CJSA_0995 mutS; recombination and DNA strand exchange inhibitor K07456 mutS2; DNA mismatch repair protein MutS2
D CJSA_0299 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CJSA_1000 putative exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CJSA_0682 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJSA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJSA_0597 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJSA_0552 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJSA_0422 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJSA_1097 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJSA_1013 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_pVir0014 ssb; putative single stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_1404 putative recombination protein RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CJSA_1584 recA; recA protein K03553 recA; recombination protein RecA
D CJSA_0755 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CJSA_1296 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CJSA_1633 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CJSA_0648 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CJSA_0033 putative cytoplasmic protein K03546 sbcC; DNA repair protein SbcC/Rad50
D CJSA_1143 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CJSA_0434 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CJSA_1202 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CJSA_0609 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CJSA_1442 cas1; CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1
D CJSA_0970 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CJSA_0003 gyrB; DNA gyrase B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CJSA_1595 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJSA_pVir0012 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJSA_0858 hupB; DNA-binding protein HU-like protein K03530 hupB; DNA-binding protein HU-beta
D CJSA_0024 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJSA_0208 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cji03029]
D CJSA_1123 petB; putative ubiquinol-cytochrome C reductase cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJSA_0127 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CJSA_0198 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CJSA_1119 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CJSA_0440 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJSA_0464 fusA; elongation factor G K02355 fusA; elongation factor G
D CJSA_0626 era; GTP-binding protein Era K03595 era; GTPase
D CJSA_1210 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJSA_1033 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJSA_0607 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJSA_1113 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJSA_1002 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CJSA_1135 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CJSA_0371 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CJSA_0562 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CJSA_1013 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_pVir0014 ssb; putative single stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CJSA_0120 OMP85 family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D CJSA_0715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJSA_0714 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CJSA_1159 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJSA_1158 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D CJSA_1199 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CJSA_0977 adenylosuccinate lyase K03686 dnaJ; molecular chaperone DnaJ
D CJSA_0217 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJSA_1518 mrp; putative ATP/GTP-binding protein (Mrp protein-like protein) K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CJSA_0903 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJSA_0856 SCO1/SenC family protein K07152 SCO1; protein SCO1
D CJSA_0488 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cji02000]
D CJSA_0759 msbA; lipid export ABC transport protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CJSA_1072 pglK; ABC transporter, permease/ATP-binding protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D CJSA_0575 ABC-type transmembrane transport protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CJSA_1499 putative ABC transporter ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D CJSA_0834 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CJSA_0277 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CJSA_0275 modB; molybdate transport system permease protein K02018 modB; molybdate transport system permease protein
D CJSA_0274 modC; molybdate transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CJSA_1456 putative tungsten ABC-transport system periplamic substrate binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CJSA_1455 putativetungsten ABC-transport system permease protein K05773 tupB; tungstate transport system permease protein
D CJSA_1454 putative tungsten ABC-transport system ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CJSA_0165 iron ABC transporter, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CJSA_0164 iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CJSA_0163 iron ABC transporter, ATP binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CJSA_0691 ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CJSA_0695 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CJSA_0694 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CJSA_0696 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CJSA_1560 putative ABC transport system periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJSA_1558 iamB; putative ABC transport system permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJSA_1559 iamA; putative ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CJSA_1561 putative lipoprotein K18480 linN; cholesterol transport system auxiliary component
D CJSA_1306 putative periplasmic toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CJSA_0581 pstS; phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CJSA_0582 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D CJSA_0583 pstA; phosphate ABC transporter, permease protein PstA, putative K02038 pstA; phosphate transport system permease protein
D CJSA_0584 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CJSA_0866 peb1A; bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D CJSA_0864 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJSA_0865 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJSA_0867 pebC; amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CJSA_0698 hisJ; histidine-binding protein precursor K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CJSA_0847 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D CJSA_0848 glnQ; amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CJSA_0961 livK; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJSA_0962 livJ; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJSA_0960 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CJSA_0959 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CJSA_0958 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJSA_0957 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJSA_0726 NLPA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CJSA_0727 NLPA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CJSA_0728 NLPA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CJSA_1138 putative NLPA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CJSA_0729 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D CJSA_0730 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CJSA_0925 cjaA; putative amino-acid transporter periplasmic solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CJSA_0772 glnH; putative glutamine binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CJSA_0437 paqP; amino-acid ABC transporter integral membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJSA_0438 amino-acid ABC transporter integral membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJSA_0885 glnP; amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJSA_0439 paqQ; amino-acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CJSA_1496 putative peptide ABC-transport system periplasmic peptide-binding protein K25103 nikZ; nickel transport system substrate-binding protein
D CJSA_1495 putative peptide ABC-transport system permease protein K25104 nikY; nickel transport system permease protein
D CJSA_1494 putative peptide ABC-transport system permease protein K25105 nikX; nickel transport system permease protein
D CJSA_1493 putative peptide ABC-transport system ATP-binding protein K25106 nikW; nickel transport system ATP-binding protein [EC:7.2.2.11]
D CJSA_1492 putative peptide ABC-transport system ATP-binding protein K25107 nikV; nickel transport system ATP-binding protein [EC:7.2.2.11]
D CJSA_1290 ceuE; enterochelin ABC transporter, periplasmic enterochelin-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CJSA_1288 ceuC; enterochelin ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D CJSA_1287 ceuB; enterochelin ABC transporter, permease protein K25284 yclN; iron-siderophore transport system permease protein
D CJSA_1289 ceuD; enterochelin ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CJSA_1529 chuD; putative hemin uptake system periplasmic hemin-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CJSA_1527 chuB; putative hemin uptake system permease protein K25027 btuC; cobalamin transport system permease protein
D CJSA_1528 chuC; putative hemin uptake system ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CJSA_0134 cation ABC transporter, periplasmic cation-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CJSA_0132 cation ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CJSA_0133 cation ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CJSA_1372 kpsM; capsular polysaccharide ABC transporter, permease protein K09688 kpsM; capsular polysaccharide transport system permease protein
D CJSA_1370 kpsE; capsular polysaccharide ABC transporter K10107 kpsE; capsular polysaccharide transport system permease protein
D CJSA_1371 kpsT; capsular polysaccharide ABC transporter, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CJSA_0781 putative integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D CJSA_0287 putative integral membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D CJSA_0633 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CJSA_1215 putative integral membrane protein K09811 ftsX; cell division transport system permease protein
D CJSA_1216 putative ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CJSA_1572 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CJSA_1573 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CJSA_0886 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CJSA_1118 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJSA_1574 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJSA_0527 putative MATE family transport protein K26937 dinF; MATE family, multidrug efflux pump
D CJSA_0457 fucP; L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CJSA_1531 kgtP; alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D CJSA_1500 Putative MFS (Major Facilitator Superfamily) transport protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CJSA_0227 major facilitator superfamily protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CJSA_0313 major facilitator family transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D CJSA_0983 putative MFS (Major Facilitator Superfamily) transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CJSA_0035 MFS family drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CJSA_1196 putative efflux pump K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D CJSA_1179 putative MFS (Major Facilitator Superfamily) transporter protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CJSA_0431 putative MFS (Major Facilitator Superfamily) transport protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CJSA_0213 putative integral membrane protein K19416 yccA; modulator of FtsH protease
D CJSA_0215 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D CJSA_0311 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CJSA_0310 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CJSA_0567 putative OmpA family membrane protein K02557 motB; chemotaxis protein MotB
D CJSA_0169 exbB1; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CJSA_1540 exbB2; exbB/tolQ family transport protein K03561 exbB; biopolymer transport protein ExbB
D CJSA_0101 exbD3; putative exbD/tolR family transport protein K03559 exbD; biopolymer transport protein ExbD
D CJSA_0170 exbD1; biopolymer ExbD/TolR family transporter K03559 exbD; biopolymer transport protein ExbD
D CJSA_1541 exbD2; exbB/tolQ family transport protein K03559 exbD; biopolymer transport protein ExbD
D CJSA_0690 corA; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D CJSA_0487 crcB; CrcB protein-like protein K06199 crcB; fluoride exporter
D CJSA_0173 putative integral membrane protein with hemolysin domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CJSA_1401 cadF; outer membrane fibronectin-binding protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CJSA_1588 putative lipoprotein K12689 capA; campylobacter adhesion protein
D CJSA_0712 cfrA; ferric enterobactin uptake receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CJSA_0168 TonB-dependent colicin receptor protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D CJSA_1526 chuA; hemin uptake system outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJSA_0974 cmeD; outer membrane component of efflux system (multidrug efflux system CmeDEF) K12340 tolC; outer membrane protein
D CJSA_0338 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJSA_0120 OMP85 family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D CJSA_1016 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D CJSA_0616 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D CJSA_1191 putative periplasmic protein K04744 lptD; LPS-assembly protein
D CJSA_1101 cation efflux family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CJSA_0893 cation efflux family protein K13283 fieF; ferrous-iron efflux pump FieF
D CJSA_0240 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D CJSA_0339 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJSA_0284 SMR family multidrug efflux pump K18924 ykkC; paired small multidrug resistance pump
D CJSA_0283 SMR family multidrug efflux pump K18925 ykkD; paired small multidrug resistance pump
D CJSA_1112 SMR family multidrug efflux pump K11742 mdtI; spermidine export protein MdtI
D CJSA_1111 SMR family multidrug efflux pump K11743 mdtJ; spermidine export protein MdtJ
D CJSA_0006 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D CJSA_0079 dcuA; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CJSA_0635 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CJSA_0069 lctP; L-lactate permease K03303 lutP; lactate permease
D CJSA_1424 putP; putative sodium/proline permease K11928 putP; sodium/proline symporter
D CJSA_1130 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJSA_1039 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D CJSA_1566 nhaA2; Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D CJSA_1567 nhaA1; Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D CJSA_1169 kefB; putative glutathione-regulated potassium-efflux system protein K03455 KEA1_2_3; K+:H+ antiporter
D CJSA_1221 ktrB; putative K+ uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D CJSA_1222 ktrA; putative K+ uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D CJSA_1303 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CJSA_1537 sdaC; amino acid transporter K03837 sdaC; serine transporter
D CJSA_0491 Na/Pi-cotransporter, putative K03324 yjbB; phosphate:Na+ symporter
D CJSA_1125 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D CJSA_0757 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CJSA_0882 putative integral membrane protein K24180 mleP; malate permease and related proteins
D CJSA_0992 putative LysE family transporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CJSA_1053 MarC family integral membrane protein K05595 marC; multiple antibiotic resistance protein
D CJSA_0981 putative cell division/peptidoglycan biosynthesis protein K03588 ftsW; cell division protein FtsW
D CJSA_0157 putative integral membrane protein K23242 mntP; manganese efflux pump family protein
D CJSA_1569 putative FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D CJSA_1570 p19; periplasmic protein p19 K07230 p19; periplasmic iron binding protein
D CJSA_0102 TonB domain-containing protein K03832 tonB; periplasmic protein TonB
D CJSA_0171 tonB1; TonB transport protein K03832 tonB; periplasmic protein TonB
D CJSA_0710 tonB3; TonB transport protein K03832 tonB; periplasmic protein TonB
D CJSA_1542 tonB2; putative TonB transport protein K03832 tonB; periplasmic protein TonB
D CJSA_0104 pal; peptidoglycan-associated lipoprotein Omp18 K03640 pal; peptidoglycan-associated lipoprotein
D CJSA_0103 tolB; translocation protein TolB K03641 tolB; TolB protein
D CJSA_0241 molybdopterin containing oxidoreductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D CJSA_0340 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJSA_0574 putative secretion protein HlyD K13888 macA; membrane fusion protein, macrolide-specific efflux system
D CJSA_1328 putative ferrous iron transport protein K04758 feoA; ferrous iron transport protein A
D CJSA_1329 feoB; ferrous iron transport protein K04759 feoB; ferrous iron transport protein B
D CJSA_0172 putative transporter K17938 sbmA; peptide/bleomycin uptake transporter
D CJSA_0679 transthyretin-like periplasmic protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:cji02044]
D CJSA_0974 cmeD; outer membrane component of efflux system (multidrug efflux system CmeDEF) K12340 tolC; outer membrane protein
D CJSA_1397 ctsD; general secretory pathway protein D K02453 gspD; general secretion pathway protein D
D CJSA_1394 ctsE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CJSA_1393 general secretory pathway protein F K02455 gspF; general secretion pathway protein F
D CJSA_0647 putative periplasmic protein K02456 gspG; general secretion pathway protein G
D CJSA_1278 putative periplasmic protein K02456 gspG; general secretion pathway protein G
D CJSA_0780 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJSA_0799 YGGT family protein K02221 yggT; YggT family protein
D CJSA_0011 comEA; competence protein ComEA K02237 comEA; competence protein ComEA
D CJSA_1149 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D CJSA_0971 putative purine/pyrimidine phosphoribosyltransferase K02242 comFC; competence protein ComFC
D CJSA_0829 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJSA_0309 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJSA_0803 FlhB domain protein K04061 flhB2; flagellar biosynthesis protein
D CJSA_0292 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CJSA_0294 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D CJSA_0185 flil; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJSA_0053 fliY; flagellar motor switch protein FliY K02417 fliN; flagellar motor switch protein FliN
D CJSA_0325 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CJSA_0775 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJSA_1586 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D CJSA_1117 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJSA_pVir0001 virB8; VirB8 K03203 virB8; type IV secretion system protein VirB8
D CJSA_pVir0003 virB10; VirB10 K03195 virB10; type IV secretion system protein VirB10
D CJSA_pVir0005 trbB; conjugative transfer regulon protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D CJSA_pVir0007 virD4; VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CJSA_pVir0002 virB9; VirB9 K12049 comB9; ComB9 competence protein
D CJSA_pVir0011 hypothetical protein K12052 comB6; ComB6 competence protein
D CJSA_pVir0052 virB4; VirB4 K12053 comB4; ComB4 competence protein
D CJSA_1314 putative periplasmic protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJSA_1588 putative lipoprotein K12689 capA; campylobacter adhesion protein
D CJSA_0887 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJSA_1035 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CJSA_0442 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJSA_1034 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CJSA_0212 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJSA_1597 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CJSA_0673 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJSA_1144 ftsY; putative signal recognition particle protein K03110 ftsY; fused signal recognition particle receptor
D CJSA_1036 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJSA_0903 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJSA_1114 tatA; Sec-independent protein translocase (TatA/E-like protein) K03116 tatA; sec-independent protein translocase protein TatA
D CJSA_0547 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CJSA_0546 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cji02042]
D CJSA_0072 cdtA; cytolethal distending toxin A K11013 cdtA; cytolethal distending toxin subunit A
D CJSA_0071 cdtB; cytolethal distending toxin B K11014 cdtB; cytolethal distending toxin subunit B
D CJSA_0070 cdtC; cytolethal distending toxin C K11015 cdtC; cytolethal distending toxin subunit C
D CJSA_0173 putative integral membrane protein with hemolysin domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cji02022]
D CJSA_0642 kdpD; truncated KdpD protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CJSA_1160 dccS; two-component sensor (histidine kinase) K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJSA_1164 two-component sensor (histidine kinase) K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJSA_1201 racS; two-component sensor (histidine kinase) K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJSA_1200 racR; two-component regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJSA_0329 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJSA_1165 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJSA_0836 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJSA_0749 flgS; sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CJSA_0967 flgR; sigma-54 associated transcriptional activator K02481 flgR; two-component system, NtrC family, response regulator
D CJSA_0260 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJSA_1060 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJSA_0869 cheB; putative MCP protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJSA_0261 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
C 02035 Bacterial motility proteins [BR:cji02035]
D CJSA_0260 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJSA_0259 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CJSA_0868 cheR; putative MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJSA_0869 cheB; putative MCP protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJSA_1060 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJSA_0261 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJSA_0019 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0239 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_1428 putative MCP-type signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_1476 putative methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJSA_0294 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D CJSA_0185 flil; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJSA_0775 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJSA_1586 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D CJSA_1117 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJSA_0829 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJSA_0309 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJSA_0293 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D CJSA_0054 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJSA_0053 fliY; flagellar motor switch protein FliY K02417 fliN; flagellar motor switch protein FliN
D CJSA_0325 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CJSA_0292 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CJSA_1386 flgI; lagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D CJSA_0725 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CJSA_0651 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D CJSA_1339 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CJSA_0493 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJSA_0041 conserved hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D CJSA_0495 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CJSA_0494 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CJSA_0042 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CJSA_0661 flgG2; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CJSA_0662 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CJSA_1387 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CJSA_0043 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D CJSA_1632 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CJSA_1390 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CJSA_0833 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D CJSA_0969 putative lipoprotein K09860 flgP; outer membrane protein FlgP
D CJSA_0968 hypothetical protein K24346 flgQ; flagellar motility protein FlgQ
D CJSA_0684 flaC; flagellin subunit protein FlaC K02406 fliC; flagellin
D CJSA_1273 flaB; flagellin K02406 fliC; flagellin
D CJSA_1274 flaA; flagellin K02406 fliC; flagellin
D CJSA_0515 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D CJSA_0516 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CJSA_0055 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D CJSA_0311 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CJSA_0310 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CJSA_0567 putative OmpA family membrane protein K02557 motB; chemotaxis protein MotB
D CJSA_1017 flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D CJSA_0514 flaG; flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D CJSA_0058 flhF; flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CJSA_0057 ParaA family ATPase K04562 flhG; flagellar biosynthesis protein FlhG
D CJSA_0780 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cji04812]
D CJSA_0253 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJSA_0660 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJSA_0659 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CJSA_0091 ParA family chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D CJSA_pVir0024 putative plasmid partioning ParA protein K03496 parA; chromosome partitioning protein
D CJSA_0092 ParB family chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cji04147]
D CJSA_0488 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D CJSA_1583 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJSA_1334 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJSA_1333 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CJSA_0365 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJSA_0308 ahpC; alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CJSA_1159 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJSA_0715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJSA_1451 pgi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJSA_1001 guaB; inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CJSA_0440 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJSA_0844 putative histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CJSA_1105 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJSA_0606 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJSA_0872 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CJSA_0876 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJSA_0630 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJSA_0795 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJSA_0663 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJSA_0938 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CJSA_0837 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJSA_0898 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJSA_1332 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJSA_1463 Blc protein-like protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:cji02048]
D CJSA_1442 cas1; CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1
D CJSA_1441 cas2; CRISPR-associated Cas2 family protein K09951 cas2; CRISPR-associated protein Cas2
D CJSA_1443 putative CRISPR-associated protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D CJSA_1465 hsdR; putative type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CJSA_1467 hsdS; putative type I restriction enzyme S protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CJSA_1469 hsdM; putative type I restriction enzyme M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CJSA_0032 type II restriction-modification enzyme K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CJSA_0199 D12 class N6 adenine-specific DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CJSA_0130 McrBC restriction endonuclease system, McrB subunit, putative K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CJSA_0131 conserved hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D CJSA_1163 putative hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D CJSA_pVir0046 putative RelE/StbE family addiction module toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D CJSA_0660 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJSA_0253 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJSA_0800 gltX; glutamylglutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_1226 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJSA_0217 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cji01504]
D CJSA_0273 putative periplasmic beta-lactamase K19210 blaOXA-61; beta-lactamase class D OXA-61 [EC:3.5.2.6]
D CJSA_1235 hypothetical protein K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D CJSA_1236 putative N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D CJSA_0193 tetO; tetracycline resistance protein K18220 tetM; ribosomal protection tetracycline resistance protein
D CJSA_0431 putative MFS (Major Facilitator Superfamily) transport protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CJSA_0340 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJSA_0339 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJSA_0338 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJSA_0974 cmeD; outer membrane component of efflux system (multidrug efflux system CmeDEF) K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cji03100]
D CJSA_t0043 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJSA_t0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJSA_t0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJSA_t0004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJSA_t0037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJSA_t0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJSA_t0011 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJSA_t0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJSA_t0027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CJSA_t0019 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJSA_t0023 tRNA-Val K14221 tRNA-Asp; tRNA Asp
D CJSA_t0034 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CJSA_t0013 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJSA_t0003 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJSA_t0021 tRNA-Arg K14224 tRNA-Glu; tRNA Glu
D CJSA_t0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJSA_t0032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJSA_t0008 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJSA_t0039 tRNA-His K14226 tRNA-His; tRNA His
D CJSA_t0002 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJSA_t0005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJSA_t0015 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJSA_t0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJSA_t0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJSA_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJSA_t0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJSA_t0022 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJSA_t0025 tRNA-Leu K14229 tRNA-Lys; tRNA Lys
D CJSA_t0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJSA_t0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJSA_t0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJSA_t0029 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CJSA_t0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJSA_t0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJSA_t0030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJSA_t0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJSA_t0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJSA_t0009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJSA_t0010 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CJSA_t0007 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CJSA_t0044 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJSA_t0020 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJSA_t0024 tRNA-Lys K14237 tRNA-Val; tRNA Val
D CJSA_t0031 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CJSA_Cj16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJSA_Cj23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJSA_Cj23SAC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJSA_Cj23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJSA_Cj5SB 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJSA_Cj5SC 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJSA_Cj5SA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJSA_CjSRP1 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CJSA_CjrnpB1 rnpB; RNA component of RNase P K01978 rnpB; M1 RNA
D CJSA_CjtmRNA1 ssrA; 10Sa RNA (tmRNA) K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CJSA_0162 saccharopine dehydrogenase K27502 E1.5.1.55; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D CJSA_1461 MdaB protein-like protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D CJSA_0823 putative cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D CJSA_0604 msrA; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CJSA_1054 msrB; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CJSA_0352 putative sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D CJSA_0020 ccpA-1; cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CJSA_0332 ccpA-2; cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CJSA_0248 anti-oxidant AhpCTSA family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJSA_0735 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJSA_1205 hydB; Ni/Fe-hydrogenase large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D CJSA_1330 hydA2; putative Ni/Fe-hydrogenase small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D CJSA_1206 hydA; Ni/Fe-hydrogenase small chain K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D CJSA_0580 cft; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CJSA_0205 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CJSA_1121 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CJSA_0336 coproporphyrinogen III oxidase K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]
D CJSA_1037 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CJSA_0269 putative acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D CJSA_1051 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CJSA_0978 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D CJSA_1068 pglB; oligosaccharide transferase to N-glycosylate proteins K17251 pglB; undecaprenyl-diphosphooligosaccharide---protein glycotransferase [EC:2.4.99.19]
D CJSA_0380 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CJSA_1346 cysC; adenylylsulfate kinase K23148 E2.7.1.224; cytidine diphosphoramidate kinase [EC:2.7.1.224]
D CJSA_1349 hypothetical protein K22424 E2.7.3.13; glutamine kinase [EC:2.7.3.13]
D CJSA_1347 putative sugar nucleotidyltransferase K01009 E2.7.7.103; L-glutamine-phosphate cytidylyltransferase [EC:2.7.7.103]
D CJSA_1066 pglC; galactosyltransferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D CJSA_0910 putative acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CJSA_0945 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CJSA_0611 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CJSA_0922 putative secreted nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CJSA_0181 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CJSA_1322 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CJSA_0178 putative kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CJSA_0459 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D CJSA_1580 DNA liagase K26441 lig; DNA ligase [EC:6.5.1.1]
D CJSA_1099 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D CJSA_0068 putative oxidoreductase iron-sulfur subunit K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CJSA_0067 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CJSA_0066 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CJSA_1430 fdhD; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D CJSA_0216 NifU family protein K13819 K13819; NifU-like protein
D CJSA_0741 napD; NapD protein-like protein K02570 napD; periplasmic nitrate reductase NapD
D CJSA_1316 fldA; lavodoxin FldA K03839 fldA; flavodoxin I
D CJSA_0737 napG; quinol dehydrogenase periplasmic component K02573 napG; ferredoxin-type protein NapG
D CJSA_0738 napH; quinol dehydrogenase membrane component K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CJSA_0683 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D CJSA_0796 mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D CJSA_0895 putative lipoprotein K03668 hslJ; heat shock protein HslJ
D CJSA_1049 clpS; ATP-dependent Clp protease adaptor protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CJSA_0183 tig; trigger factor K03545 tig; trigger factor
D CJSA_0351 putative ferric reductase-like transmembrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D CJSA_1047 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CJSA_0592 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D CJSA_0593 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CJSA_0594 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CJSA_0590 hypF; [NiFe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D CJSA_0180 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D CJSA_1025 putative nuclease K07457 K07457; endonuclease III related protein
D CJSA_0139 conserved hypothetical protein K07460 yraN; putative endonuclease
D CJSA_0601 dprA; DNA processing protein A K04096 smf; DNA processing protein
D CJSA_0188 recombination factor protein RarA K07478 ycaJ; putative ATPase
D CJSA_1074 wlaX; polysaccharide biosynthesis protein K07501 K07501; 3'-5' exonuclease
C 99979 Viral proteins
C 99998 Others
D CJSA_0596 prophage Lp2 protein 6 K07504 K07504; predicted type IV restriction endonuclease
D CJSA_1554 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CJSA_0976 cmeF; integral membrane component of efflux system (multidrug efflux system CmeDEF) K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CJSA_0621 MFS di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CJSA_0623 MFS di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CJSA_1132 possible phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CJSA_0569 sodium-dependent transporter, putative K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJSA_0879 putative sodium:amino-acid symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJSA_0880 putative sodium:amino-acid symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJSA_0849 putative amino-acid transport protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D CJSA_0902 conserved hypothetical protein K06346 jag; spoIIIJ-associated protein
D CJSA_1458 putative allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
C 99993 Cell motility
D CJSA_0082 putative lipoprotein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D CJSA_0862 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein
D CJSA_0039 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D CJSA_0347 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CJSA_0888 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D CJSA_1305 putative periplasmic protein (VacJ-like protein) K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CJSA_1344 kpsS; capsule polysaccharide export protein KpsS K07265 kpsS; capsular polysaccharide export protein
D CJSA_1345 kpsC; capsule polysaccharide export protein KpsC K07266 kpsC; capsular polysaccharide export protein
C 99994 Others
D CJSA_0064 hemerythrin family non-heme iron protein K07216 hr; hemerythrin
D CJSA_0065 hemerythrin family non-heme iron protein K07216 hr; hemerythrin
D CJSA_1162 hemerythrin family non-heme iron protein K07216 hr; hemerythrin
D CJSA_0218 putative iron-binding protein K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CJSA_0372 colicin V production protein-like protein K03558 cvpA; membrane protein required for colicin V production
D CJSA_1448 putative periplasmic protein K03796 bax; Bax protein
D CJSA_0435 ctb; group III truncated hemoglobin K06886 glbN; hemoglobin
D CJSA_1150 rbn; putative ribonuclease BN K07058 K07058; membrane protein
D CJSA_0377 conserved hypothetical protein K03749 dedD; DedD protein
D CJSA_0014 putative integral membrane protein K08996 yagU; putative membrane protein
D CJSA_0175 PhnA domain-containing protein K06193 phnA; protein PhnA
C 99997 Function unknown
D CJSA_0789 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein
D CJSA_1320 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein
D CJSA_1218 putative fibronectin domain-containing lipoprotein K06882 K06882; uncharacterized protein
D CJSA_0748 conserved hypothetical protein K06921 K06921; uncharacterized protein
D CJSA_1026 putative ATP/GTP-binding protein K06923 K06923; uncharacterized protein
D CJSA_0784 CoA-binding domain-containing protein K06929 K06929; uncharacterized protein
D CJSA_0467 conserved hypothetical protein K06940 K06940; uncharacterized protein
D CJSA_0025 sodium/dicarboxylate symporter K06956 K06956; uncharacterized protein
D CJSA_0675 conserved hypothetical protein K06960 K06960; uncharacterized protein
D CJSA_0052 peptidase family protein K06992 K06992; uncharacterized protein
D CJSA_1307 putative ntegral membrane protein K07003 K07003; uncharacterized protein
D CJSA_1310 putative periplasmic protein K07017 K07017; uncharacterized protein
D CJSA_1473 putative permease K07089 K07089; uncharacterized protein
D CJSA_0317 putative integral membrane protein K07090 K07090; uncharacterized protein
D CJSA_1392 putative integral membrane protein K07090 K07090; uncharacterized protein
D CJSA_0136 putative TAT (Twin-Arginine Translocation) pathway signal sequence domain protein K07093 K07093; uncharacterized protein
D CJSA_0828 hypothetical protein K07097 K07097; uncharacterized protein
D CJSA_0801 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D CJSA_1422 putative inner membrane protein K07112 K07112; uncharacterized protein
D CJSA_1470 conserved hypothetical protein K07118 K07118; uncharacterized protein
D CJSA_0386 putative periplasmic protein K07126 K07126; uncharacterized protein
D CJSA_1449 putative helix-turn-helix containing protein K07133 K07133; uncharacterized protein
D CJSA_0670 conserved hypothetical protein K07164 K07164; uncharacterized protein
D CJSA_0904 conserved hypothetical protein K08998 K08998; uncharacterized protein
D CJSA_0541 putative GatB/Yqey family protein K09117 K09117; uncharacterized protein
D CJSA_1416 putative integral membrane protein K09792 K09792; uncharacterized protein
D CJSA_0419 conserved hypothetical protein K09794 K09794; uncharacterized protein
D CJSA_0578 putative periplasmic protein K09795 K09795; uncharacterized protein
D CJSA_0034 putative periplasmic protein K09797 K09797; uncharacterized protein
D CJSA_0600 putative periplasmic protein K09798 K09798; uncharacterized protein
D CJSA_1418 conserved hypothetical protein K09804 K09804; uncharacterized protein
D CJSA_1514 conserved hypothetical protein K09805 K09805; uncharacterized protein
D CJSA_1011 hypothetical protein K09824 virK; uncharacterized protein
D CJSA_0080 putative lipoprotein K09859 K09859; uncharacterized protein
D CJSA_0927 conserved hypothetical protein K09861 K09861; uncharacterized protein
D CJSA_0785 putative integral membrane protein K09943 K09943; uncharacterized protein
D CJSA_0952 TrkA domain-containing protein K09944 K09944; uncharacterized protein
D CJSA_1373 hypothetical protein K09979 K09979; uncharacterized protein
D CJSA_1102 hypothetical protein K09981 K09981; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 27, 2024