+D GENES KO
#
KEGG Orthology (KO) - Campylobacter jejuni subsp. jejuni S3
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cjs00010]
D CJS3_1613 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJS3_0884 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJS3_0587 fbaA; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJS3_1496 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJS3_1498 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJS3_1497 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CJS3_0423 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJS3_1754 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJS3_0382 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJS3_1556 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJS3_0526 oorA; 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJS3_0527 oorB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJS3_1209 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJS3_1627 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJS3_1615 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJS3_1502 algC; Phosphomannomutase / Phosphoglucomutase / Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJS3_0974 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:cjs00020]
D CJS3_1761 gltA; Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D CJS3_0879 acnB; Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJS3_0521 icd; Isocitrate dehydrogenase (NADP); Monomeric isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CJS3_0526 oorA; 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJS3_0527 oorB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJS3_0528 oorC; 2-oxoglutarate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CJS3_0525 oorD; 2-oxoglutarate oxidoreductase, delta subunit, putative K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CJS3_0524 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJS3_0523 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJS3_0427 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJS3_0428 Putative succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJS3_0399 Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJS3_0400 Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJS3_0398 frdC; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D CJS3_1462 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CJS3_0522 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJS3_0383 Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CJS3_1086 accC-1; acetyl-CoA carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D CJS3_0975 Pyruvate carboxyl transferase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D CJS3_0974 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CJS3_1556 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cjs00030]
D CJS3_1613 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJS3_0443 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CJS3_1727 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CJS3_0270 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CJS3_0967 rpiB; Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CJS3_1502 algC; Phosphomannomutase / Phosphoglucomutase / Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJS3_0960 prsA; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CJS3_0405 Gluconate 2-dehydrogenase, membrane-bound, flavoprotein K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D CJS3_0404 hypothetical protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D CJS3_0587 fbaA; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJS3_0884 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:cjs00040]
D CJS3_0474 Altronate hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D CJS3_0475 Altronate hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D CJS3_1614 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJS3_0443 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CJS3_1513 capsular polysaccharide biosynthesis protein, putative K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cjs00051]
D CJS3_1502 algC; Phosphomannomutase / Phosphoglucomutase / Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJS3_1520 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CJS3_1513 capsular polysaccharide biosynthesis protein, putative K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CJS3_0477 Putative oxidoreductase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D CJS3_0473 Putative lyase K26911 fucH; 2-dehydro-3-deoxy-L-fuconate aldolase [EC:4.1.2.64]
D CJS3_0884 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJS3_0587 fbaA; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJS3_1496 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJS3_1519 wcbK; GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CJS3_0967 rpiB; Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cjs00052]
D CJS3_1177 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJS3_1614 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJS3_1502 algC; Phosphomannomutase / Phosphoglucomutase / Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:cjs00500]
D CJS3_1614 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJS3_1502 algC; Phosphomannomutase / Phosphoglucomutase / Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJS3_1613 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cjs00520]
D CJS3_1464 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJS3_0350 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CJS3_0865 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CJS3_0902 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJS3_1758 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJS3_0498 Putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CJS3_1390 pseB; UDP-GlcNAc-specific C4,6 dehydratase/C5 epimerase PseB K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CJS3_1391 pseC; C4 aminotransferase specific for PseB product, PseC K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]
D CJS3_1413 pseH; N-Acetyltransferase, PseH K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D CJS3_1412 pseG; UDP-6-deoxy-AltdiNAc hydrolase, PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CJS3_1417 Pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CJS3_1411 Pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CJS3_1167 UDP-N-acetylglucosamine 4,6-dehydratase K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D CJS3_1168 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase K15910 pglE; UDP-N-acetylbacillosamine transaminase [EC:2.6.1.34]
D CJS3_1169 4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase K15913 pglD; UDP-N-acetylbacillosamine N-acetyltransferase [EC:2.3.1.203]
D CJS3_1422 neuC; UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D CJS3_1421 Legionaminic acid synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D CJS3_1425 Legionaminic acid cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D CJS3_1502 algC; Phosphomannomutase / Phosphoglucomutase / Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJS3_1614 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJS3_1177 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJS3_1613 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJS3_1519 wcbK; GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CJS3_1520 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:cjs00620]
D CJS3_1615 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJS3_1556 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJS3_0526 oorA; 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJS3_0527 oorB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJS3_1627 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJS3_0740 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJS3_0739 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJS3_0382 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJS3_0433 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJS3_1388 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJS3_1387 accC-2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJS3_0126 accD; Acetyl-coenzyme A carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJS3_1209 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJS3_1665 Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing protein K18930 dld; D-lactate dehydrogenase
D CJS3_0481 aldA; aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D CJS3_0857 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CJS3_1384 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CJS3_1086 accC-1; acetyl-CoA carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D CJS3_0975 Pyruvate carboxyl transferase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D CJS3_0522 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJS3_0383 Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CJS3_1462 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CJS3_0399 Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJS3_0400 Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJS3_0398 frdC; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D CJS3_0974 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CJS3_1798 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CJS3_0534 Putative integral memnbrane protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cjs00630]
D CJS3_1615 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJS3_0522 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJS3_1761 gltA; Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D CJS3_0879 acnB; Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJS3_1256 (S)-2-hydroxy-acid oxidase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CJS3_1040 Putative oxidoreductase ferredoxin-type protein, clusters with CPO K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D CJS3_1482 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CJS3_1277 Predicted phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CJS3_1557 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CJS3_0750 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJS3_0392 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJS3_0481 aldA; aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D CJS3_1590 fdhA; formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJS3_1591 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJS3_1589 fdhB; Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CJS3_1588 fdhC; Putative formate dehydrogenase, cytochrome B subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CJS3_0838 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:cjs00640]
D CJS3_1615 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJS3_0740 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJS3_0739 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJS3_0433 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJS3_1388 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJS3_1387 accC-2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJS3_0126 accD; Acetyl-coenzyme A carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJS3_0523 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJS3_0524 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJS3_0879 acnB; Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJS3_1209 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cjs00650]
D CJS3_0427 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJS3_0428 Putative succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJS3_0399 Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJS3_0400 Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJS3_0398 frdC; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D CJS3_1556 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJS3_0526 oorA; 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJS3_0527 oorB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJS3_0564 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJS3_0565 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cjs00660]
D CJS3_0564 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJS3_0565 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJS3_0523 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJS3_0524 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJS3_1796 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CJS3_1795 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CJS3_1797 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cjs00562]
D CJS3_0127 Putative fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CJS3_1496 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cjs00190]
D CJS3_1659 nuoA; NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CJS3_1658 nuoB; NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CJS3_1657 nuoC; NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CJS3_1656 nuoD; NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CJS3_1655 nuoE; NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CJS3_1654 hypothetical protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CJS3_1653 nuoG; NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CJS3_1652 nuoH; NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CJS3_1651 nuoI; NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CJS3_1650 nuoJ; NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CJS3_1649 nuoK; NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CJS3_1648 nuoL; NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CJS3_1647 nuoM; NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CJS3_1646 nuoN; NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CJS3_0427 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJS3_0428 Putative succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJS3_0399 Succinate dehydrogenase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJS3_0400 Succinate dehydrogenase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJS3_0398 frdC; Fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D CJS3_1228 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CJS3_1227 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJS3_1226 petC; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CJS3_1570 ccoN; Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CJS3_1569 ccoO; Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CJS3_1568 ccoQ; Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CJS3_1567 ccoP; Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CJS3_0081 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CJS3_0082 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CJS3_1195 cyf; Cytochrome C553 (soluble cytochrome f) K08738 CYC; cytochrome c
D CJS3_0104 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CJS3_0106 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CJS3_0105 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CJS3_0103 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CJS3_0107 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CJS3_1246 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJS3_0101 ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJS3_0102 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJS3_0978 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CJS3_0628 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CJS3_1454 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJS3_0594 UDP-galactose-lipid carrier transferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cjs00680]
D CJS3_1590 fdhA; formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJS3_1591 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJS3_1589 fdhB; Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CJS3_1588 fdhC; Putative formate dehydrogenase, cytochrome B subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CJS3_0392 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJS3_1754 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJS3_0522 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJS3_0587 fbaA; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJS3_0884 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJS3_0740 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJS3_0739 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJS3_1615 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJS3_0423 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJS3_0932 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJS3_0312 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJS3_0271 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cjs00910]
D CJS3_0828 napA; Periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D CJS3_0831 Nitrate reductase cytochrome c550-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D CJS3_1452 nrfA; Cytochrome c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D CJS3_1453 nrfH; Cytochrome c nitrite reductase, small subunit NrfH K15876 nrfH; cytochrome c nitrite reductase small subunit
D CJS3_1315 Putative dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CJS3_1104 Predicted amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJS3_0750 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJS3_0007 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJS3_0008 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CJS3_0226 cynT; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cjs00920]
D CJS3_1690 Possible sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJS3_1760 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CJS3_0811 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CJS3_0953 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJS3_1803 metA; Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cjs00061]
D CJS3_0433 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJS3_1388 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJS3_1387 accC-2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJS3_0126 accD; Acetyl-coenzyme A carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJS3_0431 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D CJS3_1399 Putative acyl carrier protein K02078 acpP; acyl carrier protein
D CJS3_0115 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJS3_0314 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJS3_1398 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJS3_0432 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJS3_0424 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJS3_0263 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJS3_1495 fabI; Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D CJS3_0980 aas; Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:cjs00121]
D CJS3_0855 3-oxoacyl-[acyl-carrier protein] reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cjs00561]
D CJS3_1627 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJS3_0315 plsX; Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CJS3_0348 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJS3_0509 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CJS3_0247 dgkA; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:cjs00564]
D CJS3_1238 gpsA; Glycerol-3-phosphate dehydrogenase NAD(P)+ K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CJS3_0348 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJS3_0509 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CJS3_0247 dgkA; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CJS3_1446 pldA; Phospholipase A1 precursor; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CJS3_0980 aas; Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D CJS3_1442 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CJS3_1161 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CJS3_1162 Phosphatidylserine decarboxylase-related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CJS3_0891 psd; Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CJS3_1114 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CJS3_1691 pgpA; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism [PATH:cjs00565]
D CJS3_1446 pldA; Phospholipase A1 precursor; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D CJS3_1446 pldA; Phospholipase A1 precursor; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D CJS3_1446 pldA; Phospholipase A1 precursor; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:cjs00592]
D CJS3_1446 pldA; Phospholipase A1 precursor; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
D CJS3_0956 Putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cjs00230]
D CJS3_1502 algC; Phosphomannomutase / Phosphoglucomutase / Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJS3_0960 prsA; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CJS3_0192 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CJS3_1296 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CJS3_1420 formyltransferase, putative K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJS3_0183 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJS3_0999 purL; Phosphoribosylformylglycinamidine synthase, synthetase subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CJS3_0506 purS; Phosphoribosylformylglycinamidine synthase, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CJS3_0507 purQ; Phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJS3_1607 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CJS3_0753 purE; Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CJS3_0505 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CJS3_0023 purB-1; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CJS3_0997 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJS3_0969 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CJS3_0280 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJS3_1260 Uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CJS3_1106 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CJS3_0318 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJS3_1472 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CJS3_1468 Putative nucleotide phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CJS3_1294 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJS3_1219 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CJS3_0024 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJS3_0220 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CJS3_1317 GTP pyrophosphokinase, (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CJS3_0344 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CJS3_1281 Possible phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CJS3_1578 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CJS3_0629 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJS3_0490 HIT family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D CJS3_1690 Possible sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJS3_0766 Transthyretin-like periplasmic protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 00240 Pyrimidine metabolism [PATH:cjs00240]
D CJS3_0268 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJS3_1574 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJS3_1145 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CJS3_1237 Amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CJS3_0249 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CJS3_0852 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CJS3_0222 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CJS3_0371 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CJS3_1319 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CJS3_0318 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJS3_0500 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CJS3_0027 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CJS3_0280 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJS3_1383 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CJS3_1389 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CJS3_0024 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJS3_0220 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CJS3_0814 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CJS3_0026 thyX; Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CJS3_0877 Oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cjs00250]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJS3_0084 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CJS3_0029 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CJS3_0086 dcuA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CJS3_0656 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJS3_0973 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJS3_1578 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CJS3_0023 purB-1; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CJS3_1145 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CJS3_0007 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJS3_0008 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CJS3_1582 Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJS3_0750 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJS3_0268 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJS3_1574 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJS3_0507 purQ; Phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJS3_1464 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJS3_0192 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cjs00260]
D CJS3_0572 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJS3_1072 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJS3_0148 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJS3_0133 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CJS3_0860 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CJS3_0392 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJS3_0423 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJS3_0932 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJS3_0312 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJS3_0271 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CJS3_0877 Oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D CJS3_1161 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CJS3_1705 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CJS3_0872 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJS3_0340 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CJS3_0339 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cjs00270]
D CJS3_0811 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CJS3_0953 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJS3_1488 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CJS3_1243 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJS3_1143 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CJS3_0116 mtnA; MTA/SAH nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D CJS3_1260 Uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CJS3_1240 luxS; S-ribosylhomocysteine lyase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CJS3_0590 pyridoxal phosphate-dependent deaminase, putative K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D CJS3_0572 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJS3_1072 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJS3_0148 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJS3_1803 metA; Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CJS3_1804 O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CJS3_0259 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJS3_1209 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJS3_0522 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJS3_1705 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CJS3_0932 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJS3_0312 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cjs00280]
D CJS3_0259 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cjs00290]
D CJS3_0872 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJS3_1796 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CJS3_1795 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CJS3_1797 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CJS3_0564 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJS3_0565 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJS3_0622 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CJS3_0012 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CJS3_0259 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJS3_1798 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CJS3_0534 Putative integral memnbrane protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cjs00300]
D CJS3_0148 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJS3_0572 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJS3_1072 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJS3_0854 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CJS3_0193 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CJS3_1686 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CJS3_0216 argD; Acetylornithine aminotransferase / N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CJS3_1097 dapE; N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CJS3_1609 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CJS3_0300 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CJS3_0168 Carboxynorspermidine dehydrogenase, putative K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D CJS3_1723 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJS3_0843 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D CJS3_0168 Carboxynorspermidine dehydrogenase, putative K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
C 00220 Arginine biosynthesis [PATH:cjs00220]
D CJS3_1043 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CJS3_0656 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJS3_0973 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJS3_0507 purQ; Phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJS3_0750 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJS3_0214 argA; acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D CJS3_0215 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CJS3_0213 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CJS3_0216 argD; Acetylornithine aminotransferase / N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cjs00330]
D CJS3_0812 speA; Arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CJS3_0991 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CJS3_0989 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CJS3_1595 Carboxynorspermidine decarboxylase, putative K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CJS3_1123 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CJS3_1582 Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJS3_0096 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CJS3_0548 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cjs00340]
D CJS3_1678 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CJS3_1685 hisI; Phosphoribosyl-AMP cyclohydrolase / Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CJS3_1682 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CJS3_1415 hisH-1; Imidazole glycerol phosphate synthase glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CJS3_1681 hisH-2; Imidazole glycerol phosphate synthase glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CJS3_1414 hisF-1; Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CJS3_1684 hisF-2; Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CJS3_1680 hisB; Histidinol-phosphatase / Imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CJS3_0303 hisC; Biosynthetic Aromatic amino acid aminotransferase beta / Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJS3_1679 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cjs00350]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJS3_0303 hisC; Biosynthetic Aromatic amino acid aminotransferase beta / Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:cjs00360]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJS3_0303 hisC; Biosynthetic Aromatic amino acid aminotransferase beta / Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cjs00380]
D CJS3_1104 Predicted amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJS3_1482 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cjs00400]
D CJS3_0767 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II / AroA II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CJS3_1057 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CJS3_0066 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CJS3_0395 aroE; Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CJS3_0377 aroK; Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CJS3_0936 aroF; 5-Enolpyruvylshikimate-3-phosphate synthase / AroF K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CJS3_1716 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CJS3_0336 Anthranilate synthase, aminase component / TrpAa K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJS3_0337 Anthranilate synthase, amidotransferase component / Anthranilate phosphoribosyltransferase / TrpAb/TrpB K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D CJS3_0338 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CJS3_0489 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CJS3_0340 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CJS3_0339 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CJS3_0302 pheA; Chorismate mutase I / Prephenate dehydratase / AroHI/PheAIp/ACT domain protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CJS3_0129 tyrA; Prephenate dehydrogenase TyrA K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJS3_0303 hisC; Biosynthetic Aromatic amino acid aminotransferase beta / Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cjs00410]
D CJS3_0282 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CJS3_0283 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cjs00430]
D CJS3_0739 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJS3_0740 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cjs00450]
D CJS3_1488 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CJS3_1243 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJS3_0145 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CJS3_0549 pyridine nucleotide-disulfide oxidoreductase family protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CJS3_1690 Possible sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJS3_1583 Selenide,water dikinase/selenocysteine-containing protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CJS3_1475 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CJS3_0882 metS; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cjs00460]
D CJS3_1104 Predicted amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJS3_0029 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CJS3_0392 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cjs00470]
D CJS3_0946 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJS3_0846 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJS3_0507 purQ; Phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJS3_1734 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CJS3_0421 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJS3_0084 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CJS3_1609 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CJS3_0300 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cjs00480]
D CJS3_1619 Lactam utilization protein LAMB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CJS3_0971 pepA; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJS3_1030 pepD; Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CJS3_0521 icd; Isocitrate dehydrogenase (NADP); Monomeric isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:cjs00540]
D CJS3_0264 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CJS3_0131 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CJS3_0566 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CJS3_0275 hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CJS3_0277 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CJS3_0859 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CJS3_1525 kpsF; Capsular polysaccharide export system protein KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CJS3_0374 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CJS3_0637 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CJS3_0861 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CJS3_0758 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CJS3_1180 waaM; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CJS3_0246 membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJS3_1191 gmhA-1; Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJS3_1517 gmhA-2; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJS3_1192 hldE; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D CJS3_1194 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CJS3_1193 waaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CJS3_1518 D,D-heptose 7-phosphate kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D CJS3_1516 D-glycero-D-manno-heptose 1-phosphate guanosyltransferase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
D CJS3_1179 waaC; Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CJS3_1189 waaF; ADP-heptose--lipooligosaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cjs00541]
D CJS3_1614 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJS3_1177 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJS3_1519 wcbK; GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CJS3_1520 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CJS3_0865 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CJS3_1390 pseB; UDP-GlcNAc-specific C4,6 dehydratase/C5 epimerase PseB K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CJS3_1391 pseC; C4 aminotransferase specific for PseB product, PseC K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]
D CJS3_1413 pseH; N-Acetyltransferase, PseH K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D CJS3_1412 pseG; UDP-6-deoxy-AltdiNAc hydrolase, PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CJS3_1417 Pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CJS3_1411 Pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CJS3_1167 UDP-N-acetylglucosamine 4,6-dehydratase K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D CJS3_0498 Putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:cjs00550]
D CJS3_0902 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJS3_1758 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJS3_1103 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CJS3_0421 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJS3_1723 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJS3_0846 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJS3_0843 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CJS3_0868 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CJS3_0201 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJS3_0422 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJS3_1088 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CJS3_0501 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJS3_0642 ftsI; Cell division protein FtsI (Peptidoglycan synthetase) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJS3_0515 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:cjs00552]
D CJS3_0201 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJS3_1521 capsular polysaccharide biosynthesis protein, putative K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cjs00543]
D CJS3_0811 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cjs00730]
D CJS3_0445 thiC; Thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CJS3_1129 thiD; Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CJS3_1095 thiF; Sulfur carrier protein adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D CJS3_0229 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJS3_1093 thiH; Thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CJS3_0307 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CJS3_1094 thiG; Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CJS3_1092 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CJS3_1128 thiE; Thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CJS3_1539 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CJS3_0629 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJS3_0429 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cjs00740]
D CJS3_1045 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJS3_0562 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CJS3_1703 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CJS3_0373 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CJS3_1261 ribE; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CJS3_0579 Riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CJS3_0816 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cjs00750]
D CJS3_0312 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJS3_1283 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CJS3_1282 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CJS3_0860 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cjs00760]
D CJS3_0219 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CJS3_0280 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJS3_1499 nadD; Nicotinate-nucleotide adenylyltransferase / bacterial NadD family K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CJS3_0858 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CJS3_1110 Competence/damage-inducible protein CinA family K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CJS3_1099 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CJS3_0631 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cjs00770]
D CJS3_0564 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJS3_0565 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJS3_0622 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CJS3_0012 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CJS3_0284 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CJS3_0283 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CJS3_0384 Pantothenate kinase type III, CoaX-like protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CJS3_0866 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CJS3_0815 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CJS3_1608 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CJS3_1504 acpS; Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CJS3_0259 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJS3_0282 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:cjs00780]
D CJS3_0290 bioC; Biotin synthesis protein bioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CJS3_0432 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJS3_0424 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJS3_0263 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJS3_1495 fabI; Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJS3_0291 bioG; Biotin synthesis protein bioG K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D CJS3_0292 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJS3_0293 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CJS3_0294 bioD; Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CJS3_1763 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CJS3_0098 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:cjs00790]
D CJS3_0190 folE; GTP cyclohydrolase I type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CJS3_0756 conserved hypothetical protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D CJS3_0347 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CJS3_0065 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CJS3_0575 Alternative dihydrofolate reductase 2 / Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CJS3_1135 folC; folC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CJS3_1045 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJS3_0562 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CJS3_0905 pabA; Para-aminobenzoate synthase, amidotransferase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D CJS3_0906 pabB; Para-aminobenzoate synthase, aminase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CJS3_0158 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CJS3_0159 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CJS3_0016 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CJS3_1801 NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CJS3_0160 Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJS3_0242 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CJS3_1598 Possible molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CJS3_0776 mog; Molybdopterin biosynthesis Mog protein, molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CJS3_0901 Molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CJS3_1600 Putative molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CJS3_1445 Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cjs00670]
D CJS3_0899 Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CJS3_0392 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJS3_1420 formyltransferase, putative K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJS3_0183 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJS3_0997 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJS3_0097 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJS3_1403 formyl transferase domain protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJS3_0026 thyX; Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CJS3_0838 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CJS3_1244 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CJS3_1251 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cjs00860]
D CJS3_0889 gltX-1; Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_1385 gltX-2; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_0532 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CJS3_0897 hemL; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CJS3_1044 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CJS3_0535 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CJS3_1127 hemD; Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CJS3_1288 hemE; Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CJS3_1041 hemN; Coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D CJS3_0352 Hypothetical membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CJS3_0496 Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CJS3_1694 Putative heme oxygenase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cjs00130]
D CJS3_0163 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CJS3_0536 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D CJS3_0816 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CJS3_0310 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CJS3_1382 hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D CJS3_1466 hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D CJS3_0067 Chlorohydrolase/deaminase family protein K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D CJS3_0116 mtnA; MTA/SAH nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D CJS3_0454 radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D CJS3_1756 hypothetical protein K11785 mqnD; 1,4-dihydroxy-6-naphthoate synthase [EC:1.14.-.-]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cjs00900]
D CJS3_0307 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CJS3_1441 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CJS3_1688 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D CJS3_1151 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CJS3_0737 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CJS3_0935 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CJS3_0816 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CJS3_1726 Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CJS3_0531 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CJS3_0868 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CJS3_1727 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:cjs01054]
D CJS3_0084 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cjs00332]
D CJS3_0096 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CJS3_0548 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cjs00261]
D CJS3_1690 Possible sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJS3_0572 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJS3_1072 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJS3_0854 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CJS3_0193 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cjs00521]
D CJS3_1502 algC; Phosphomannomutase / Phosphoglucomutase / Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJS3_0127 Putative fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:cjs00401]
D CJS3_0129 tyrA; Prephenate dehydrogenase TyrA K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJS3_0303 hisC; Biosynthetic Aromatic amino acid aminotransferase beta / Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CJS3_0336 Anthranilate synthase, aminase component / TrpAa K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CJS3_0115 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJS3_0424 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJS3_1495 fabI; Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CJS3_0431 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D CJS3_1399 Putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cjs00999]
D CJS3_1143 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CJS3_0395 aroE; Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cjs00362]
D CJS3_0260 Probable tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJS3_1633 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation [PATH:cjs00627]
D CJS3_1104 Predicted amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJS3_0698 hypothetical protein K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61]
D CJS3_0816 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D CJS3_0260 Probable tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D CJS3_1104 Predicted amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CJS3_0260 Probable tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cjs03020]
D CJS3_0470 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJS3_0471 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJS3_1676 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJS3_1318 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cjs03010]
D CJS3_0934 rpsA; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D CJS3_1224 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D CJS3_1779 rpsC; SSU ribosomal protein S3p K02982 RP-S3; small subunit ribosomal protein S3
D CJS3_1675 rpsD; SSU ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4
D CJS3_1768 rpsE; SSU ribosomal protein S5p K02988 RP-S5; small subunit ribosomal protein S5
D CJS3_1117 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D CJS3_0483 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D CJS3_1771 rpsH; SSU ribosomal protein S8p K02994 RP-S8; small subunit ribosomal protein S8
D CJS3_1559 rpsI; SSU ribosomal protein S9p K02996 RP-S9; small subunit ribosomal protein S9
D CJS3_1786 rpsJ; SSU ribosomal protein S10p K02946 RP-S10; small subunit ribosomal protein S10
D CJS3_1674 rpsK; SSU ribosomal protein S11p K02948 RP-S11; small subunit ribosomal protein S11
D CJS3_0482 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D CJS3_1673 rpsM; SSU ribosomal protein S13p/S18 K02952 RP-S13; small subunit ribosomal protein S13
D CJS3_1772 rpsN; SSU ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14
D CJS3_0926 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D CJS3_0761 rpsP; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D CJS3_1776 rpsQ; SSU ribosomal protein S17p K02961 RP-S17; small subunit ribosomal protein S17
D CJS3_1119 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D CJS3_1781 rpsS; SSU ribosomal protein S19p K02965 RP-S19; small subunit ribosomal protein S19
D CJS3_1692 rpsT; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D CJS3_0360 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D CJS3_0467 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D CJS3_1782 rplB; LSU ribosomal protein L2p K02886 RP-L2; large subunit ribosomal protein L2
D CJS3_1785 rplC; LSU ribosomal protein L3p K02906 RP-L3; large subunit ribosomal protein L3
D CJS3_1784 rplD; LSU ribosomal protein L4p K02926 RP-L4; large subunit ribosomal protein L4
D CJS3_1773 rplE; LSU ribosomal protein L5p K02931 RP-L5; large subunit ribosomal protein L5
D CJS3_1770 rplF; LSU ribosomal protein L6p K02933 RP-L6; large subunit ribosomal protein L6
D CJS3_0469 rplL; LSU ribosomal protein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12
D CJS3_0655 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D CJS3_0468 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D CJS3_0466 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D CJS3_1560 rplM; LSU ribosomal protein L13p K02871 RP-L13; large subunit ribosomal protein L13
D CJS3_1775 rplN; LSU ribosomal protein L14p K02874 RP-L14; large subunit ribosomal protein L14
D CJS3_1767 rplO; LSU ribosomal protein L15p K02876 RP-L15; large subunit ribosomal protein L15
D CJS3_1778 rplP; LSU ribosomal protein L16p K02878 RP-L16; large subunit ribosomal protein L16
D CJS3_1677 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D CJS3_1769 rplR; LSU ribosomal protein L18p K02881 RP-L18; large subunit ribosomal protein L18
D CJS3_0765 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D CJS3_0234 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D CJS3_0093 rplU; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D CJS3_1780 rplV; LSU ribosomal protein L22p K02890 RP-L22; large subunit ribosomal protein L22
D CJS3_1783 rplW; LSU ribosomal protein L23p K02892 RP-L23; large subunit ribosomal protein L23
D CJS3_1774 rplX; LSU ribosomal protein L24p K02895 RP-L24; large subunit ribosomal protein L24
D CJS3_0297 rplY; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D CJS3_0094 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D CJS3_0442 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D CJS3_1777 rpmC; LSU ribosomal protein L29p K02904 RP-L29; large subunit ribosomal protein L29
D CJS3_0154 rpmE; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D CJS3_0316 rpmF; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D CJS3_0463 rpmG; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D CJS3_1005 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D CJS3_0233 rpmI; LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D CJS3_1672 rpmJ; LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D CJS3_1808 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1814 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1827 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1811 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJS3_1830 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJS3_1817 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJS3_1812 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJS3_1831 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJS3_1818 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cjs00970]
D CJS3_1859 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJS3_1809 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJS3_1828 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJS3_1815 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJS3_1853 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJS3_1854 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJS3_1824 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJS3_1842 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJS3_1843 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CJS3_1835 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJS3_1839 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJS3_1850 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CJS3_1826 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJS3_1813 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJS3_1837 tRNA-Arg K14224 tRNA-Glu; tRNA Glu
D CJS3_1848 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJS3_1833 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJS3_1821 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJS3_1855 tRNA-His K14226 tRNA-His; tRNA His
D CJS3_1810 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJS3_1816 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJS3_1829 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJS3_1849 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJS3_1852 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJS3_1834 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJS3_1832 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJS3_1838 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJS3_1841 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJS3_1857 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJS3_1825 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJS3_1844 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJS3_1845 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CJS3_1856 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJS3_1846 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJS3_1858 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJS3_1851 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJS3_1819 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJS3_1822 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJS3_1823 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CJS3_1820 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CJS3_1860 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJS3_1836 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJS3_1840 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJS3_1847 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CJS3_0889 gltX-1; Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_1385 gltX-2; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_1107 gatA; aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CJS3_1239 gatB; aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CJS3_0388 gatC; aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CJS3_0499 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJS3_0630 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJS3_0755 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJS3_1278 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJS3_0202 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJS3_0379 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJS3_1475 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CJS3_0850 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJS3_0882 metS; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJS3_0097 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJS3_1403 formyl transferase domain protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJS3_0823 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJS3_1138 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJS3_1109 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJS3_0391 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJS3_1217 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJS3_0533 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJS3_0813 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJS3_0938 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJS3_0937 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJS3_1316 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJS3_0378 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cjs03060]
D CJS3_1766 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D CJS3_0464 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJS3_0224 secG; Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJS3_1140 secD; Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CJS3_1139 secF; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CJS3_1141 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJS3_1002 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJS3_0984 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJS3_0760 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJS3_1248 ftsY; Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJS3_1218 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CJS3_0569 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJS3_0568 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CJS3_0900 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJS3_0351 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cjs04122]
D CJS3_0229 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJS3_0052 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJS3_1715 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJS3_1598 Possible molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CJS3_0160 Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJS3_1597 Possible molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D CJS3_0242 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CJS3_0776 mog; Molybdopterin biosynthesis Mog protein, molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CJS3_1096 thiS; Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D CJS3_1095 thiF; Sulfur carrier protein adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cjs03018]
D CJS3_0571 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CJS3_1754 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJS3_1299 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CJS3_0621 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJS3_1198 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CJS3_1252 Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CJS3_1788 Zn-dependent hydrolase, RNA-metabolising K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CJS3_0807 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJS3_1264 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJS3_1454 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJS3_0594 UDP-galactose-lipid carrier transferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cjs03030]
D CJS3_0444 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_1349 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_0769 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJS3_1199 dnaX; DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJS3_0574 DNA poymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJS3_0620 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJS3_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJS3_0553 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CJS3_1720 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJS3_pTet0028 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CJS3_1118 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJS3_1718 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CJS3_0009 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CJS3_0576 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cjs03410]
D CJS3_0585 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CJS3_0085 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CJS3_1701 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CJS3_1007 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJS3_0245 xth; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJS3_0028 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJS3_0576 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cjs03420]
D CJS3_1132 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CJS3_0333 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJS3_0675 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CJS3_1291 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CJS3_1148 ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJS3_0825 ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJS3_0576 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cjs03430]
D CJS3_1101 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CJS3_1148 ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJS3_0825 ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJS3_0311 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CJS3_1105 Putative coiled-coil protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CJS3_0028 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJS3_pTet0028 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CJS3_1118 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJS3_0769 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJS3_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJS3_1199 dnaX; DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJS3_0620 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJS3_0574 DNA poymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJS3_0444 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_1349 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_0576 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJS3_0732 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cjs03440]
D CJS3_0028 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJS3_pTet0028 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CJS3_1118 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJS3_1308 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CJS3_1755 recA; RecA protein K03553 recA; recombination protein RecA
D CJS3_0847 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CJS3_1460 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CJS3_1807 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CJS3_0456 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CJS3_1561 Helicase K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CJS3_0769 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJS3_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJS3_1199 dnaX; DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJS3_0620 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJS3_0574 DNA poymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJS3_0444 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_1349 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_0679 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cjs02010]
D CJS3_1618 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CJS3_1617 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D CJS3_1616 ABC-type tungstate transport system, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CJS3_0289 modA; Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D CJS3_0287 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D CJS3_0286 modC; Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CJS3_0171 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CJS3_0170 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CJS3_0169 Putative iron-uptake ABC transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CJS3_1470 Putative periplasmic protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CJS3_1730 Possible ABC transport system periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJS3_1728 Putative ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJS3_1729 Putative ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CJS3_0603 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CJS3_0604 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CJS3_0605 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CJS3_0606 pstB; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CJS3_0963 pebA; Major cell-binding factor precursor PebA K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D CJS3_0961 Putative ABC-type amino-acid transporter permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJS3_0962 Putative ABC-type amino-acid transporter permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJS3_0964 pebC; Amino-acid ABC transporter ATP-binding protein PebC K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CJS3_0786 Histidine-binding protein precursor K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CJS3_0942 Putative amino acid ABC tansporter permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D CJS3_0943 Putative glutamine transport ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CJS3_1067 livK; High-affinity leucine-specific transport system, periplasmic binding protein livK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJS3_1068 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJS3_1066 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D CJS3_1065 livM; Branched-chain amino acid transport system permease protein livM K01998 livM; branched-chain amino acid transport system permease protein
D CJS3_1064 livG; Branched-chain amino acid transport ATP-binding protein livG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJS3_1063 livF; Branched-chain amino acid transport ATP-binding protein livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJS3_1242 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CJS3_0818 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CJS3_0819 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CJS3_0820 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CJS3_0821 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D CJS3_0822 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CJS3_0142 znuA; Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D CJS3_0140 znuB; Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D CJS3_0141 znuC; Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CJS3_1527 kpsE; Capsular polysaccharide export system inner membrane protein KpsE K10107 kpsE; capsular polysaccharide transport system permease protein
D CJS3_1529 kpsM; Capsular polysaccharide ABC transporter, permease protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein
D CJS3_1528 kpsT; Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CJS3_0870 Predicted permease YjgP/YjgQ family K07091 lptF; lipopolysaccharide export system permease protein
D CJS3_0299 Permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D CJS3_0660 ABC-transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CJS3_1321 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CJS3_1322 ftsE; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CJS3_0851 Phospholipid-lipopolysaccharide ABC transporter K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CJS3_0597 macB; Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CJS3_1667 Putative ABC transporter K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:cjs03070]
D CJS3_1080 Probable outer membrane component of multidrug efflux pump K12340 tolC; outer membrane protein
D CJS3_1554 pulD; Type II secretion outermembrane pore forming protein (PulD) K02453 gspD; general secretion pathway protein D
D CJS3_1550 mshG; MSHA biogenesis protein MshG K02455 gspF; general secretion pathway protein F
D CJS3_1437 pulG; Type II secretion envelope pseudopilin protein, PulG K02456 gspG; general secretion pathway protein G
D CJS3_0678 Putative periplasmic protein K02456 gspG; general secretion pathway protein G
D CJS3_1551 pulE; Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CJS3_1140 secD; Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CJS3_1139 secF; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CJS3_0464 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJS3_0224 secG; Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJS3_1766 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D CJS3_1141 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJS3_1002 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJS3_0984 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJS3_1248 ftsY; Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJS3_0760 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJS3_1218 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CJS3_0569 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJS3_0568 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CJS3_pTet0032 TraC protein K03197 virB2; type IV secretion system protein VirB2
D CJS3_pTet0026 type IV secretion system component, putative K03200 virB5; type IV secretion system protein VirB5
D CJS3_pTet0022 type IV secretion system protein VirB9, putative K03204 virB9; type IV secretion system protein VirB9
D CJS3_pTet0025 type IV secretion system component, putative K03201 virB6; type IV secretion system protein VirB6
D CJS3_pTet0023 type IV secretion system protein VirB8, putative K03203 virB8; type IV secretion system protein VirB8
D CJS3_pTet0021 type IV secretion system protein VirB10, putative K03195 virB10; type IV secretion system protein VirB10
D CJS3_pTet0031 type IV secretion system protein VirB4, putative K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D CJS3_pTet0020 type IV secretion system protein VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D CJS3_pTet0019 cmgd4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cjs02020]
D CJS3_0603 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CJS3_1271 htrA; HtrA protease/chaperone protein / Serine protease (Protease DO) K04771 degP; serine protease Do [EC:3.4.21.107]
D CJS3_1433 flaB; Flagellin K02406 fliC; flagellin
D CJS3_1434 flaA; Flagellin K02406 fliC; flagellin
D CJS3_0771 flaC; Flagellin C K02406 fliC; flagellin
D CJS3_0061 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CJS3_0324 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CJS3_0672 Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CJS3_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJS3_0662 Putative anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CJS3_1150 Carbon storage regulator K03563 csrA; carbon storage regulator
D CJS3_1465 Possible nucleotidyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CJS3_0750 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJS3_0279 Sugar phosphate permease K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D CJS3_1234 Putative C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJS3_0661 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D CJS3_1310 hydC; Quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D CJS3_0965 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJS3_1585 tlpA; methyl-accepting chemotaxis protein (tlpA) K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0019 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_1644 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0143 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0253 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0255 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_1157 Putative MCP-type signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0272 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D CJS3_0273 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJS3_1165 cheY; Chemotaxis regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJS3_0966 cheB; Protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJS3_0274 cheV; Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJS3_1228 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CJS3_1227 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJS3_1226 petC; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CJS3_1195 cyf; Cytochrome C553 (soluble cytochrome f) K08738 CYC; cytochrome c
D CJS3_1570 ccoN; Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CJS3_1569 ccoO; Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CJS3_1568 ccoQ; Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CJS3_1567 ccoP; Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CJS3_0081 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CJS3_0082 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CJS3_1080 Probable outer membrane component of multidrug efflux pump K12340 tolC; outer membrane protein
D CJS3_1303 Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CJS3_1228 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cjs02024]
D CJS3_1240 luxS; S-ribosylhomocysteine lyase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CJS3_0336 Anthranilate synthase, aminase component / TrpAa K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJS3_0767 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II / AroA II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CJS3_0778 ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CJS3_0782 Putative ABC transport system permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CJS3_0781 Putative ABC transport system permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CJS3_1067 livK; High-affinity leucine-specific transport system, periplasmic binding protein livK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJS3_1068 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJS3_1066 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D CJS3_1065 livM; Branched-chain amino acid transport system permease protein livM K01998 livM; branched-chain amino acid transport system permease protein
D CJS3_1064 livG; Branched-chain amino acid transport ATP-binding protein livG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJS3_1063 livF; Branched-chain amino acid transport ATP-binding protein livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJS3_1045 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJS3_1703 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CJS3_0355 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJS3_1002 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJS3_0464 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJS3_0224 secG; Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJS3_1766 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D CJS3_1141 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJS3_0984 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJS3_1248 ftsY; Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJS3_0760 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cjs02030]
D CJS3_1585 tlpA; methyl-accepting chemotaxis protein (tlpA) K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0019 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_1644 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0143 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0253 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0255 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_1157 Putative MCP-type signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0273 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJS3_0272 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D CJS3_1165 cheY; Chemotaxis regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJS3_0966 cheB; Protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJS3_0274 cheV; Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJS3_0965 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJS3_0305 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJS3_0060 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJS3_0342 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJS3_0059 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJS3_0324 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CJS3_0323 motB; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D CJS3_0589 Putative periplasmic protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cjs02040]
D CJS3_0516 fliE; Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJS3_0304 fliF; Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D CJS3_0305 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJS3_0306 fliH; Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CJS3_0191 fliI; Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJS3_0041 fliK; Flagellar hook-length control protein fliK K02414 fliK; flagellar hook-length control protein FliK
D CJS3_1503 fliL; Flagellar biosynthesis protein fliL K02415 fliL; flagellar protein FliL
D CJS3_0060 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJS3_0342 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJS3_0059 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJS3_0864 fliP; Flagellar biosynthesis protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D CJS3_1757 fliQ; Flagellar biosynthesis protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJS3_1221 fliR; Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJS3_0924 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJS3_0817 flgA; Flagellar basal-body P-ring formation protein flgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CJS3_0518 flgB; Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CJS3_0517 flgC; Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CJS3_0042 flgD; Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CJS3_1805 flgE-2; Flagellar hook subunit protein K02390 flgE; flagellar hook protein FlgE
D CJS3_0043 flgE; Flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D CJS3_0748 flgF; Flagellar basal-body rod protein flgF K02391 flgF; flagellar basal-body rod protein FlgF
D CJS3_0749 flgG; Flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG
D CJS3_0738 flgH; Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D CJS3_1543 flgI; Flagellar P-ring protein flgI K02394 flgI; flagellar P-ring protein FlgI
D CJS3_1544 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CJS3_1547 flgK; Flagellar hook-associated protein flgK K02396 flgK; flagellar hook-associated protein 1
D CJS3_0928 flgL; Flagellar hook-associated protein flgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D CJS3_1075 Putative lipoprotein K09860 flgP; outer membrane protein FlgP
D CJS3_1074 hypothetical protein K24346 flgQ; flagellar motility protein FlgQ
D CJS3_1433 flaB; Flagellin K02406 fliC; flagellin
D CJS3_1434 flaA; Flagellin K02406 fliC; flagellin
D CJS3_0771 flaC; Flagellin C K02406 fliC; flagellin
D CJS3_0538 fliD; Flagellar hook-associated protein fliD K02407 fliD; flagellar hook-associated protein 2
D CJS3_0539 fliS; Flagellar biosynthesis protein fliS K02422 fliS; flagellar secretion chaperone FliS
D CJS3_0324 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CJS3_0323 motB; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D CJS3_0589 Putative periplasmic protein K02557 motB; chemotaxis protein MotB
D CJS3_1050 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CJS3_0661 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D CJS3_0061 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CJS3_1754 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cjs01501]
D CJS3_0357 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJS3_0356 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJS3_0355 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJS3_1080 Probable outer membrane component of multidrug efflux pump K12340 tolC; outer membrane protein
D CJS3_0501 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJS3_0642 ftsI; Cell division protein FtsI (Peptidoglycan synthetase) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJS3_0515 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJS3_0285 Beta-lactamase K19210 blaOXA-61; beta-lactamase class D OXA-61 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:cjs01502]
D CJS3_0846 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJS3_0946 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJS3_0843 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CJS3_0422 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJS3_1088 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cjs01503]
D CJS3_0246 membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJS3_1314 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJS3_1271 htrA; HtrA protease/chaperone protein / Serine protease (Protease DO) K04771 degP; serine protease Do [EC:3.4.21.107]
D CJS3_0357 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJS3_0356 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJS3_1080 Probable outer membrane component of multidrug efflux pump K12340 tolC; outer membrane protein
D CJS3_0264 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cjs01000]
C 01001 Protein kinases [BR:cjs01001]
D CJS3_1265 dccS; Two-component system histidine kinase DccS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJS3_1269 Putative two-component sensor K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJS3_1307 racS; Two-component system histidine kinase RacS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJS3_0841 flgS; Flagellar sensory histidine kinase FlgS K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CJS3_0273 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cjs01009]
D CJS3_0511 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CJS3_0271 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cjs01002]
D CJS3_0351 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CJS3_0869 Putative processing peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJS3_1309 hydD; Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CJS3_1294 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJS3_1735 Probable lipoprotein K13695 nlpC; probable lipoprotein NlpC
D CJS3_0192 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CJS3_0007 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJS3_1464 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJS3_0940 thiJ; 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CJS3_1146 pepF; Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CJS3_0971 pepA; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJS3_1097 dapE; N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CJS3_1030 pepD; Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CJS3_1036 hipO; hippurate hydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D CJS3_1733 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CJS3_0643 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CJS3_1163 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJS3_1054 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJS3_1115 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CJS3_1271 htrA; HtrA protease/chaperone protein / Serine protease (Protease DO) K04771 degP; serine protease Do [EC:3.4.21.107]
D CJS3_0188 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CJS3_1120 lon; ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CJS3_0682 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D CJS3_0900 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJS3_0504 Putative carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CJS3_0068 pspA; protease IV (PspA) K04773 sppA; protease IV [EC:3.4.21.-]
D CJS3_0654 hslV; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CJS3_0752 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cjs01003]
D CJS3_0501 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJS3_1171 Alpha-1,3-N-acetylgalactosamine transferase PglA K15914 pglA; N,N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase [EC:2.4.1.290]
D CJS3_1175 pglH; Alpha-1,4-N-acetylgalactosamine transferase PglH K17249 pglH; GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase [EC:2.4.1.292]
D CJS3_1174 pglI; Glycosyltransferase PglI K17250 pglI; GalNAc5-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase [EC:2.4.1.293]
D CJS3_1173 pglJ; Alpha-1,4-N-acetylgalactosamine transferase PglJ K17248 pglJ; N-acetylgalactosamine-N,N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase [EC:2.4.1.291]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cjs01005]
D CJS3_0264 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CJS3_0277 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CJS3_0131 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CJS3_0566 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CJS3_0275 hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CJS3_0859 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CJS3_1180 waaM; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CJS3_0758 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CJS3_0246 membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJS3_0374 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CJS3_0861 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CJS3_0637 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CJS3_1525 kpsF; Capsular polysaccharide export system protein KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CJS3_1179 waaC; Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CJS3_1189 waaF; ADP-heptose--lipooligosaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CJS3_1191 gmhA-1; Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJS3_1517 gmhA-2; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJS3_1194 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CJS3_1192 hldE; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D CJS3_1193 waaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cjs01011]
D CJS3_0902 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJS3_1758 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJS3_1103 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CJS3_0421 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJS3_1723 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJS3_0846 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJS3_0946 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJS3_1734 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CJS3_0422 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJS3_1088 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CJS3_0201 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJS3_0849 murJ; putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D CJS3_0501 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJS3_0642 ftsI; Cell division protein FtsI (Peptidoglycan synthetase) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJS3_0515 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJS3_0887 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJS3_0635 Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CJS3_0519 protein YceG like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CJS3_0636 RlpA-like lipoprotein precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJS3_1314 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJS3_pTet0042 cpp23 K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:cjs01004]
D CJS3_0115 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJS3_0314 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJS3_1398 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJS3_0432 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJS3_0424 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJS3_0263 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJS3_1495 fabI; Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJS3_0956 Putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CJS3_1615 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJS3_0315 plsX; Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CJS3_0348 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJS3_0509 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cjs01008]
D CJS3_0084 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:cjs01006]
D CJS3_1726 Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CJS3_0531 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CJS3_0868 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CJS3_0164 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CJS3_0163 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:cjs01007]
D CJS3_0889 gltX-1; Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_1385 gltX-2; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_1316 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJS3_0378 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CJS3_0850 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJS3_1217 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJS3_0882 metS; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJS3_1109 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJS3_0823 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJS3_1138 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJS3_0391 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJS3_0630 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJS3_0813 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJS3_0755 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJS3_1278 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJS3_0379 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJS3_0533 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJS3_0202 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJS3_0499 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJS3_0938 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJS3_0937 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJS3_0810 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJS3_0149 Aspartate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CJS3_0303 hisC; Biosynthetic Aromatic amino acid aminotransferase beta / Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJS3_0292 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJS3_0216 argD; Acetylornithine aminotransferase / N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CJS3_0293 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CJS3_0897 hemL; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CJS3_0259 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJS3_0906 pabB; Para-aminobenzoate synthase, aminase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CJS3_0312 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJS3_0498 Putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cjs00194]
D CJS3_0107 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CJS3_0106 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CJS3_0105 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CJS3_0104 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CJS3_0103 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CJS3_0101 ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJS3_0102 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJS3_0978 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CJS3_1246 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cjs03000]
D CJS3_0358 cmeR; Transcriptional repressor of CmeABC operon, CmeR K18992 cmeR; TetR/AcrR family transcriptional regulator, cmeABC operon repressor
D CJS3_0689 hypothetical protein K18992 cmeR; TetR/AcrR family transcriptional regulator, cmeABC operon repressor
D CJS3_1273 hspR; HspR, transcriptional repressor of DnaK operon K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CJS3_1643 Putative transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D CJS3_0390 fur; Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CJS3_0308 FUR family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CJS3_1640 Putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJS3_0098 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CJS3_1586 N-terminal HTH domain of molybdenum-binding protein family K02019 modE; molybdate transport system regulatory protein
D CJS3_1582 Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJS3_1268 Ribbon-helix-helix protein, copG family domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D CJS3_0503 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CJS3_0100 parB; Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJS3_0805 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CJS3_0429 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CJS3_0124 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:cjs03021]
D CJS3_1676 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJS3_0470 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJS3_0471 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJS3_1318 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CJS3_1050 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CJS3_0661 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D CJS3_0061 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CJS3_0452 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CJS3_0372 nusB; Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D CJS3_0465 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CJS3_0124 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D CJS3_0276 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CJS3_1198 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cjs03019]
D CJS3_1717 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJS3_1788 Zn-dependent hydrolase, RNA-metabolising K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CJS3_1252 Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CJS3_0621 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJS3_1754 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJS3_1299 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CJS3_1198 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CJS3_0807 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJS3_1264 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJS3_1454 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJS3_0594 UDP-galactose-lipid carrier transferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CJS3_0571 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CJS3_1150 Carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:cjs03011]
D CJS3_0934 rpsA; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D CJS3_1224 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D CJS3_1779 rpsC; SSU ribosomal protein S3p K02982 RP-S3; small subunit ribosomal protein S3
D CJS3_1675 rpsD; SSU ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4
D CJS3_1768 rpsE; SSU ribosomal protein S5p K02988 RP-S5; small subunit ribosomal protein S5
D CJS3_1117 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D CJS3_0483 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D CJS3_1771 rpsH; SSU ribosomal protein S8p K02994 RP-S8; small subunit ribosomal protein S8
D CJS3_1559 rpsI; SSU ribosomal protein S9p K02996 RP-S9; small subunit ribosomal protein S9
D CJS3_1786 rpsJ; SSU ribosomal protein S10p K02946 RP-S10; small subunit ribosomal protein S10
D CJS3_1674 rpsK; SSU ribosomal protein S11p K02948 RP-S11; small subunit ribosomal protein S11
D CJS3_0482 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D CJS3_1673 rpsM; SSU ribosomal protein S13p/S18 K02952 RP-S13; small subunit ribosomal protein S13
D CJS3_1772 rpsN; SSU ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14
D CJS3_0926 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D CJS3_0761 rpsP; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D CJS3_1776 rpsQ; SSU ribosomal protein S17p K02961 RP-S17; small subunit ribosomal protein S17
D CJS3_1119 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D CJS3_1781 rpsS; SSU ribosomal protein S19p K02965 RP-S19; small subunit ribosomal protein S19
D CJS3_1692 rpsT; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D CJS3_0360 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D CJS3_0467 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D CJS3_1782 rplB; LSU ribosomal protein L2p K02886 RP-L2; large subunit ribosomal protein L2
D CJS3_1785 rplC; LSU ribosomal protein L3p K02906 RP-L3; large subunit ribosomal protein L3
D CJS3_1784 rplD; LSU ribosomal protein L4p K02926 RP-L4; large subunit ribosomal protein L4
D CJS3_1773 rplE; LSU ribosomal protein L5p K02931 RP-L5; large subunit ribosomal protein L5
D CJS3_1770 rplF; LSU ribosomal protein L6p K02933 RP-L6; large subunit ribosomal protein L6
D CJS3_0655 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D CJS3_0468 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D CJS3_0466 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D CJS3_0469 rplL; LSU ribosomal protein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12
D CJS3_1560 rplM; LSU ribosomal protein L13p K02871 RP-L13; large subunit ribosomal protein L13
D CJS3_1775 rplN; LSU ribosomal protein L14p K02874 RP-L14; large subunit ribosomal protein L14
D CJS3_1767 rplO; LSU ribosomal protein L15p K02876 RP-L15; large subunit ribosomal protein L15
D CJS3_1778 rplP; LSU ribosomal protein L16p K02878 RP-L16; large subunit ribosomal protein L16
D CJS3_1677 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D CJS3_1769 rplR; LSU ribosomal protein L18p K02881 RP-L18; large subunit ribosomal protein L18
D CJS3_0765 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D CJS3_0234 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D CJS3_0093 rplU; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D CJS3_1780 rplV; LSU ribosomal protein L22p K02890 RP-L22; large subunit ribosomal protein L22
D CJS3_1783 rplW; LSU ribosomal protein L23p K02892 RP-L23; large subunit ribosomal protein L23
D CJS3_1774 rplX; LSU ribosomal protein L24p K02895 RP-L24; large subunit ribosomal protein L24
D CJS3_0094 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D CJS3_0442 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D CJS3_1777 rpmC; LSU ribosomal protein L29p K02904 RP-L29; large subunit ribosomal protein L29
D CJS3_0154 rpmE; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D CJS3_0316 rpmF; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D CJS3_0463 rpmG; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D CJS3_1005 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D CJS3_0233 rpmI; LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D CJS3_1672 rpmJ; LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D CJS3_0297 rplY; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D CJS3_1812 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJS3_1831 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJS3_1818 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJS3_1808 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1814 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1827 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1811 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJS3_1830 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJS3_1817 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cjs03009]
D CJS3_1717 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJS3_0652 era; GTP-binding protein Era K03595 era; GTPase
D CJS3_0095 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D CJS3_0124 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D CJS3_0452 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CJS3_0372 nusB; Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D CJS3_0465 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CJS3_1789 ksgA; Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CJS3_0155 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CJS3_1046 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CJS3_0744 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CJS3_0153 Tetrapyrrole (Corrin-Porphyrin) methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CJS3_0578 RNA binding methyltransferase FtsJ like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CJS3_0152 rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CJS3_0125 ybeA; LSU m3Psi1915 methyltransferase ybeA K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CJS3_1791 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CJS3_1787 Putative ribosomal pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CJS3_0759 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJS3_1325 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJS3_0022 Putative ribosomal pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJS3_1402 acetyltransferase, GNAT family K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CJS3_0763 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CJS3_1535 Ribosomal protein S12p Asp88 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CJS3_1164 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CJS3_0625 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CJS3_0376 engA; GTP-binding protein EngA K03977 engA; GTPase
D CJS3_1317 GTP pyrophosphokinase, (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CJS3_0136 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CJS3_0137 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CJS3_1500 Iojap-related protein K09710 ybeB; ribosome-associated protein
D CJS3_0120 predicted metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D CJS3_0972 ychF; GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:cjs03016]
D CJS3_0837 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CJS3_0889 gltX-1; Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_1385 gltX-2; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_0533 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJS3_1109 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJS3_1138 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJS3_0882 metS; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJS3_1217 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJS3_0391 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJS3_0630 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJS3_0499 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJS3_0202 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJS3_0379 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJS3_0850 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJS3_0823 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJS3_0813 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJS3_0938 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJS3_0937 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJS3_1316 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJS3_0378 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CJS3_0939 HIT-family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CJS3_1323 trmB; tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CJS3_0871 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CJS3_1149 tRNA pseudouridine synthase B / Psi55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CJS3_1538 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D CJS3_0229 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJS3_0164 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CJS3_1000 trmE; GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CJS3_1230 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CJS3_1583 Selenide,water dikinase/selenocysteine-containing protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CJS3_1760 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CJS3_1004 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CJS3_0755 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJS3_1278 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJS3_0122 dusB; tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CJS3_0450 miaB; tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CJS3_0580 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CJS3_1026 tRNA (5-methoxyuridine) 34 synthase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D CJS3_0875 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D CJS3_0764 trmD; tRNA (Guanine-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CJS3_0945 Putative RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CJS3_0486 O-methyltransferase, putative K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CJS3_0052 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJS3_1715 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJS3_0117 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CJS3_1313 Predicted glycine/D-amino acid oxidase (deaminating) K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D CJS3_0567 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CJS3_0016 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CJS3_0158 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CJS3_0159 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CJS3_1801 NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CJS3_0262 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D CJS3_0491 Selenophosphate-dependent tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CJS3_1059 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CJS3_1534 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CJS3_0132 metal-dependent-like protease, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CJS3_1438 essential endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CJS3_0659 yjeE; ATPase YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CJS3_0281 MoeB/thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CJS3_0621 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJS3_1299 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cjs03012]
D CJS3_0135 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CJS3_0203 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CJS3_1223 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D CJS3_0462 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJS3_0484 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D CJS3_1476 selB; Selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D CJS3_1693 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CJS3_0223 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor
D CJS3_0773 hemK; Methylase, HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CJS3_0298 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CJS3_1671 infA; Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D CJS3_0541 efp; Translation elongation factor P K02356 efp; elongation factor P
D CJS3_1536 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cjs03110]
D CJS3_1155 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CJS3_0502 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CJS3_0265 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CJS3_0653 hslU; ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CJS3_0511 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CJS3_0807 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJS3_1264 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJS3_1083 Possible dnaJ-like protein K03686 dnaJ; molecular chaperone DnaJ
D CJS3_1305 dnaJ-2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CJS3_1272 cbpA; DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D CJS3_0998 djlA; DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D CJS3_0806 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CJS3_1263 groES; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D CJS3_1271 htrA; HtrA protease/chaperone protein / Serine protease (Protease DO) K04771 degP; serine protease Do [EC:3.4.21.107]
D CJS3_1163 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJS3_1054 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJS3_1246 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJS3_0950 Copper metallochaperone K09796 pccA; periplasmic copper chaperone A
D CJS3_0617 hypA; [NiFe] hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CJS3_0613 hypB; [NiFe] hydrogenase nickel incorporation-associated protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CJS3_1213 ppiB; Peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CJS3_0745 ppiD; Peptidyl-prolyl cis-trans isomerase ppiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CJS3_0114 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CJS3_0586 Cell binding factor 2 precursor K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CJS3_0146 trx; Thioredoxin K03671 TXN; thioredoxin
D CJS3_1477 Putative periplasmic protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJS3_0593 dsbD; Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:cjs04131]
D CJS3_0318 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJS3_1498 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJS3_0382 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJS3_0511 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cjs03051]
D CJS3_0511 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cjs03032]
D CJS3_1718 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CJS3_0954 hup; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CJS3_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJS3_0553 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CJS3_1720 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJS3_pTet0028 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CJS3_1118 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJS3_0769 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJS3_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJS3_0620 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJS3_0574 DNA poymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJS3_0444 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_1349 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_1199 dnaX; DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJS3_0009 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CJS3_0576 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJS3_0732 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJS3_1076 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CJS3_0003 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CJS3_1764 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJS3_pTet0013 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cjs03036]
D CJS3_1717 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJS3_0954 hup; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CJS3_1272 cbpA; DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D CJS3_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJS3_1612 Possible bacterioferritin K04047 dps; starvation-inducible DNA-binding protein
D CJS3_0746 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CJS3_1322 ftsE; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CJS3_0515 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJS3_0927 ftsK; Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CJS3_1087 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CJS3_1321 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CJS3_0747 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJS3_1314 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJS3_0357 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJS3_0266 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJS3_0267 mreC; Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CJS3_1326 RodA-like protein K05837 rodA; rod shape determining protein RodA
D CJS3_0099 parA; Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D CJS3_0100 parB; Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJS3_1230 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CJS3_1046 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CJS3_0907 Integrase-recombinase protein XERCD family K04763 xerD; integrase/recombinase XerD
D CJS3_1687 putative ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CJS3_1631 MloA protein, putative K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CJS3_0640 engB; GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cjs03400]
D CJS3_0880 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CJS3_0085 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CJS3_1701 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CJS3_0585 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CJS3_1007 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJS3_0245 xth; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJS3_0028 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJS3_0576 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJS3_0333 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJS3_0675 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CJS3_1291 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CJS3_1148 ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJS3_0825 ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJS3_0470 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJS3_0471 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJS3_1676 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJS3_1318 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CJS3_1132 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CJS3_1101 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CJS3_0311 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CJS3_1105 Putative coiled-coil protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CJS3_0769 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJS3_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJS3_0620 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJS3_0574 DNA poymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJS3_0444 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_1349 Exonuclease, possibly dna polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJS3_1199 dnaX; DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJS3_pTet0028 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CJS3_1118 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJS3_0732 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJS3_1561 Helicase K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CJS3_1755 recA; RecA protein K03553 recA; recombination protein RecA
D CJS3_0847 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CJS3_1460 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CJS3_1807 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CJS3_0679 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CJS3_1247 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CJS3_0456 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CJS3_1308 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CJS3_0632 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CJS3_1602 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D CJS3_1076 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CJS3_0003 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CJS3_1764 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJS3_0954 hup; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CJS3_0682 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D CJS3_0024 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJS3_0220 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cjs03029]
D CJS3_1227 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJS3_0135 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CJS3_0203 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CJS3_1223 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D CJS3_0462 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJS3_0484 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D CJS3_0652 era; GTP-binding protein Era K03595 era; GTPase
D CJS3_1316 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJS3_1138 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJS3_0630 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJS3_1217 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJS3_1107 gatA; aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CJS3_1239 gatB; aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CJS3_0388 gatC; aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CJS3_0584 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CJS3_pTet0028 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CJS3_1118 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJS3_0128 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D CJS3_0807 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJS3_0806 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CJS3_1264 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJS3_1263 groES; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D CJS3_1083 Possible dnaJ-like protein K03686 dnaJ; molecular chaperone DnaJ
D CJS3_1305 dnaJ-2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CJS3_0229 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJS3_1687 putative ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CJS3_1002 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJS3_0952 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D CJS3_0511 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cjs02000]
D CJS3_0851 Phospholipid-lipopolysaccharide ABC transporter K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CJS3_1176 Phospholipid-lipopolysaccharide ABC transporter K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D CJS3_0597 macB; Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CJS3_1667 Putative ABC transporter K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D CJS3_0929 ABC transport system ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CJS3_0289 modA; Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D CJS3_0287 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D CJS3_0286 modC; Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CJS3_1618 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CJS3_1617 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D CJS3_1616 ABC-type tungstate transport system, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CJS3_0171 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CJS3_0170 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CJS3_0169 Putative iron-uptake ABC transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CJS3_0778 ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CJS3_0782 Putative ABC transport system permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CJS3_0781 Putative ABC transport system permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CJS3_1730 Possible ABC transport system periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJS3_1728 Putative ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJS3_1729 Putative ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CJS3_1731 Putative lipoprotein K18480 linN; cholesterol transport system auxiliary component
D CJS3_1470 Putative periplasmic protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CJS3_0603 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D CJS3_0604 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CJS3_0605 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CJS3_0606 pstB; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CJS3_0963 pebA; Major cell-binding factor precursor PebA K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D CJS3_0961 Putative ABC-type amino-acid transporter permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJS3_0962 Putative ABC-type amino-acid transporter permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJS3_0964 pebC; Amino-acid ABC transporter ATP-binding protein PebC K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CJS3_0786 Histidine-binding protein precursor K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CJS3_0942 Putative amino acid ABC tansporter permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D CJS3_0943 Putative glutamine transport ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CJS3_1067 livK; High-affinity leucine-specific transport system, periplasmic binding protein livK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJS3_1068 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJS3_1066 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D CJS3_1065 livM; Branched-chain amino acid transport system permease protein livM K01998 livM; branched-chain amino acid transport system permease protein
D CJS3_1064 livG; Branched-chain amino acid transport ATP-binding protein livG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJS3_1063 livF; Branched-chain amino acid transport ATP-binding protein livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJS3_1242 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CJS3_0818 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CJS3_0819 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CJS3_0820 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CJS3_0821 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D CJS3_0822 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CJS3_1032 Putative amino-acid transporter periplasmic solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CJS3_0863 Glutamine-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CJS3_0460 Amino-acid ABC transporter integral membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJS3_0459 Amino-acid ABC transporter integral membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJS3_0982 Putative glutamine transport system permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJS3_0461 Amino-acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CJS3_1664 Putative peptide ABC-transport system periplasmic peptide-binding protein K25103 nikZ; nickel transport system substrate-binding protein
D CJS3_1663 Putative peptide ABC-transport system permease protein K25104 nikY; nickel transport system permease protein
D CJS3_1662 Putative peptide ABC-transport system permease protein K25105 nikX; nickel transport system permease protein
D CJS3_1661 Putative peptide ABC-transport system ATP-binding protein K25106 nikW; nickel transport system ATP-binding protein [EC:7.2.2.11]
D CJS3_1660 Putative peptide ABC-transport system ATP-binding protein K25107 nikV; nickel transport system ATP-binding protein [EC:7.2.2.11]
D CJS3_1450 Enterochelin uptake periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CJS3_1448 ceuC; Enterochelin uptake permease CeuC K25283 yclO; iron-siderophore transport system permease protein
D CJS3_1447 ceuB; Enterochelin uptake permease CeuB K25284 yclN; iron-siderophore transport system permease protein
D CJS3_1449 ceuD; Enterochelin uptake ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CJS3_1698 hemin uptake system periplasmic hemin-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CJS3_1696 hemin uptake system permease protein K25027 btuC; cobalamin transport system permease protein
D CJS3_1697 hemin uptake system ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CJS3_0142 znuA; Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D CJS3_0140 znuB; Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D CJS3_0141 znuC; Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CJS3_1529 kpsM; Capsular polysaccharide ABC transporter, permease protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein
D CJS3_1527 kpsE; Capsular polysaccharide export system inner membrane protein KpsE K10107 kpsE; capsular polysaccharide transport system permease protein
D CJS3_1528 kpsT; Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CJS3_0870 Predicted permease YjgP/YjgQ family K07091 lptF; lipopolysaccharide export system permease protein
D CJS3_0299 Permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D CJS3_0660 ABC-transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CJS3_1321 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CJS3_1322 ftsE; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CJS3_0983 Lipoprotein releasing system transmembrane protein LolC K02004 ABC.CD.P; putative ABC transport system permease protein
D CJS3_1743 Possible ABC transport system permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CJS3_1744 membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CJS3_1745 Putative ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJS3_1222 Putative ABC transporter ATP binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJS3_0478 fucP; L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CJS3_1700 kgtP; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D CJS3_1668 L-Proline/Glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CJS3_0240 L-Proline/Glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CJS3_0326 Putative transmembrane transport protein K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D CJS3_0476 Transmembrane transport protein K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D CJS3_1089 Putative transmembrane transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CJS3_0279 Sugar phosphate permease K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D CJS3_0035 Putative efflux protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CJS3_1302 Putative efflux pump K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D CJS3_1636 transporter, putative K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CJS3_1286 Putative transmembrane transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CJS3_0453 Putative integral membrane protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CJS3_0225 membrane protein K19416 yccA; modulator of FtsH protease
D CJS3_0227 membrane protein K16052 ynaI; MscS family membrane protein
D CJS3_0324 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CJS3_0323 motB; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D CJS3_0589 Putative periplasmic protein K02557 motB; chemotaxis protein MotB
D CJS3_1709 exbB-2; Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CJS3_0175 exbB; Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CJS3_1710 exbD; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D CJS3_0109 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D CJS3_0176 Ferric siderophore transport system, biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D CJS3_0777 corA; Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CJS3_0510 Protein crcB-like protein K06199 crcB; fluoride exporter
D CJS3_0179 transporter, putative K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CJS3_1558 Outer membrane fibronectin-binding protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CJS3_0804 cfrA; Ferric receptor CfrA K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CJS3_0174 Putative outer membrane siderophore receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D CJS3_1695 hemin uptake system outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJS3_1080 Probable outer membrane component of multidrug efflux pump K12340 tolC; outer membrane protein
D CJS3_0355 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJS3_0128 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D CJS3_1121 Putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D CJS3_0639 OstA family organic solvent tolerance protein K09774 lptA; lipopolysaccharide export system protein LptA
D CJS3_1298 Outer membrane protein Imp K04744 lptD; LPS-assembly protein
D CJS3_1205 czcD; Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CJS3_0990 Cobalt-zinc-cadmium resistance protein K13283 fieF; ferrous-iron efflux pump FieF
D CJS3_0254 zupT; Zinc transporter zupT K07238 TC.ZIP; zinc transporter, ZIP family
D CJS3_0356 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJS3_0296 SMR family multidrug efflux pump K18924 ykkC; paired small multidrug resistance pump
D CJS3_0295 SMR family multidrug efflux pump K18925 ykkD; paired small multidrug resistance pump
D CJS3_1216 mdtI; Spermidine export protein mdtI K11742 mdtI; spermidine export protein MdtI
D CJS3_1215 mdtJ; Spermidine export protein mdtJ K11743 mdtJ; spermidine export protein MdtJ
D CJS3_0006 yuiF; Histidine permease YuiF K07084 yuiF; putative amino acid transporter
D CJS3_0087 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CJS3_0662 Putative anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CJS3_0076 lctP; L-lactate permease K03303 lutP; lactate permease
D CJS3_1581 putP; Proline/sodium symporter/Propionate/sodium symporter, PutP K11928 putP; sodium/proline symporter
D CJS3_1234 Putative C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJS3_1144 Sodium/dicarboxylate symporter K07862 sstT; serine/threonine transporter
D CJS3_1736 nhaA-1; Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D CJS3_1737 nhaA-2; Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D CJS3_1380 ktrB; Potassium uptake protein, integral membrane component, KtrB K03498 trkH; trk/ktr system potassium uptake protein
D CJS3_1381 ktrA; Potassium uptake protein, integral membrane component, KtrA K03499 trkA; trk/ktr system potassium uptake protein
D CJS3_1467 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CJS3_1706 sdaC; Serine transporter K03837 sdaC; serine transporter
D CJS3_0514 Sodium-dependent phosphate transporter K03324 yjbB; phosphate:Na+ symporter
D CJS3_1229 Putative arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D CJS3_1642 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D CJS3_0849 murJ; putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D CJS3_0979 membrane protein K24180 mleP; malate permease and related proteins
D CJS3_1098 membrane protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CJS3_1158 marC; Multiple antibiotic resistance protein marC K05595 marC; multiple antibiotic resistance protein
D CJS3_1087 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CJS3_0165 membrane protein K23242 mntP; manganese efflux pump family protein
D CJS3_1740 Putative high-affinity iron permease K07243 FTR; high-affinity iron transporter
D CJS3_1741 Periplasmic protein p19 involved in high-affinity Fe2+ transport K07230 p19; periplasmic iron binding protein
D CJS3_0110 TonB-like; putative TolA function K03832 tonB; periplasmic protein TonB
D CJS3_0177 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D CJS3_0803 tonB; Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D CJS3_0112 Outer membrane lipoprotein omp16 precursor K03640 pal; peptidoglycan-associated lipoprotein
D CJS3_0111 tolB protein precursor K03641 tolB; TolB protein
D CJS3_0357 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJS3_0596 macA; Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D CJS3_1491 Ferrous iron transport protein A, putative K04758 feoA; ferrous iron transport protein A
D CJS3_1493 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CJS3_0178 Transmembrane transport protein K17938 sbmA; peptide/bleomycin uptake transporter
D CJS3_0766 Transthyretin-like periplasmic protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:cjs02044]
D CJS3_1080 Probable outer membrane component of multidrug efflux pump K12340 tolC; outer membrane protein
D CJS3_1554 pulD; Type II secretion outermembrane pore forming protein (PulD) K02453 gspD; general secretion pathway protein D
D CJS3_1551 pulE; Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CJS3_1550 mshG; MSHA biogenesis protein MshG K02455 gspF; general secretion pathway protein F
D CJS3_1437 pulG; Type II secretion envelope pseudopilin protein, PulG K02456 gspG; general secretion pathway protein G
D CJS3_0678 Putative periplasmic protein K02456 gspG; general secretion pathway protein G
D CJS3_0869 Putative processing peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJS3_0888 membrane protein K02221 yggT; YggT family protein
D CJS3_0010 Periplasmic dsDNA and ssDNA-binding protein K02237 comEA; competence protein ComEA
D CJS3_1254 Competence protein K02238 comEC; competence protein ComEC
D CJS3_1077 Possible purine/pyrimidine phosphoribosyltransferase K02242 comFC; competence protein ComFC
D CJS3_0924 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJS3_0892 cytoplasmic domain of flagellar protein FhlB-like protein K04061 flhB2; flagellar biosynthesis protein
D CJS3_0304 fliF; Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D CJS3_0306 fliH; Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CJS3_0191 fliI; Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJS3_0342 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJS3_0059 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJS3_0864 fliP; Flagellar biosynthesis protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D CJS3_1757 fliQ; Flagellar biosynthesis protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJS3_1221 fliR; Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJS3_pTet0032 TraC protein K03197 virB2; type IV secretion system protein VirB2
D CJS3_pTet0031 type IV secretion system protein VirB4, putative K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D CJS3_pTet0026 type IV secretion system component, putative K03200 virB5; type IV secretion system protein VirB5
D CJS3_pTet0025 type IV secretion system component, putative K03201 virB6; type IV secretion system protein VirB6
D CJS3_pTet0023 type IV secretion system protein VirB8, putative K03203 virB8; type IV secretion system protein VirB8
D CJS3_pTet0022 type IV secretion system protein VirB9, putative K03204 virB9; type IV secretion system protein VirB9
D CJS3_pTet0021 type IV secretion system protein VirB10, putative K03195 virB10; type IV secretion system protein VirB10
D CJS3_pTet0020 type IV secretion system protein VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D CJS3_pTet0019 cmgd4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CJS3_1477 Putative periplasmic protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJS3_pTet0018 cpp44 K12097 cag12; cag pathogenicity island protein 12
D CJS3_0984 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJS3_1140 secD; Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CJS3_0464 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJS3_1139 secF; Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CJS3_0224 secG; Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJS3_1766 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D CJS3_0760 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJS3_1248 ftsY; Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJS3_1141 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJS3_1002 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJS3_1218 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CJS3_0569 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJS3_0568 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cjs02042]
D CJS3_0079 cdtA; Cytolethal distending toxin subunit A K11013 cdtA; cytolethal distending toxin subunit A
D CJS3_0078 cdtB; Cytolethal distending toxin subunit B K11014 cdtB; cytolethal distending toxin subunit B
D CJS3_0077 cdtC; Cytolethal distending toxin subunit C K11015 cdtC; cytolethal distending toxin subunit C
D CJS3_0179 transporter, putative K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cjs02022]
D CJS3_1265 dccS; Two-component system histidine kinase DccS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJS3_1269 Putative two-component sensor K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJS3_1307 racS; Two-component system histidine kinase RacS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJS3_1306 racR; Two-component system response regulator RacR K02483 K02483; two-component system, OmpR family, response regulator
D CJS3_0346 Two-component regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJS3_1270 Putative two-component regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJS3_0931 Two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJS3_0841 flgS; Flagellar sensory histidine kinase FlgS K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CJS3_1073 flgR; Signal-transduction regulatory protein FlgR K02481 flgR; two-component system, NtrC family, response regulator
D CJS3_0273 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJS3_1165 cheY; Chemotaxis regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJS3_0966 cheB; Protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJS3_0274 cheV; Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
C 02035 Bacterial motility proteins [BR:cjs02035]
D CJS3_0273 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJS3_0272 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D CJS3_0965 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJS3_0966 cheB; Protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJS3_1165 cheY; Chemotaxis regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJS3_0274 cheV; Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJS3_1585 tlpA; methyl-accepting chemotaxis protein (tlpA) K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0019 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_1644 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0143 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0253 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0255 Methyl-accepting chemotaxis signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_1157 Putative MCP-type signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D CJS3_0306 fliH; Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CJS3_0191 fliI; Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJS3_0864 fliP; Flagellar biosynthesis protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D CJS3_1757 fliQ; Flagellar biosynthesis protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJS3_1221 fliR; Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJS3_0924 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJS3_0305 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJS3_0060 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJS3_0342 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJS3_0059 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJS3_0304 fliF; Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D CJS3_1543 flgI; Flagellar P-ring protein flgI K02394 flgI; flagellar P-ring protein FlgI
D CJS3_0817 flgA; Flagellar basal-body P-ring formation protein flgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CJS3_0738 flgH; Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D CJS3_1503 fliL; Flagellar biosynthesis protein fliL K02415 fliL; flagellar protein FliL
D CJS3_0516 fliE; Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJS3_0041 fliK; Flagellar hook-length control protein fliK K02414 fliK; flagellar hook-length control protein FliK
D CJS3_0518 flgB; Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CJS3_0517 flgC; Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CJS3_0042 flgD; Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CJS3_0748 flgF; Flagellar basal-body rod protein flgF K02391 flgF; flagellar basal-body rod protein FlgF
D CJS3_0749 flgG; Flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG
D CJS3_1544 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CJS3_1805 flgE-2; Flagellar hook subunit protein K02390 flgE; flagellar hook protein FlgE
D CJS3_0043 flgE; Flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D CJS3_1547 flgK; Flagellar hook-associated protein flgK K02396 flgK; flagellar hook-associated protein 1
D CJS3_0928 flgL; Flagellar hook-associated protein flgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D CJS3_1075 Putative lipoprotein K09860 flgP; outer membrane protein FlgP
D CJS3_1074 hypothetical protein K24346 flgQ; flagellar motility protein FlgQ
D CJS3_1433 flaB; Flagellin K02406 fliC; flagellin
D CJS3_1434 flaA; Flagellin K02406 fliC; flagellin
D CJS3_0771 flaC; Flagellin C K02406 fliC; flagellin
D CJS3_0538 fliD; Flagellar hook-associated protein fliD K02407 fliD; flagellar hook-associated protein 2
D CJS3_0539 fliS; Flagellar biosynthesis protein fliS K02422 fliS; flagellar secretion chaperone FliS
D CJS3_0061 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CJS3_0324 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CJS3_0323 motB; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D CJS3_0589 Putative periplasmic protein K02557 motB; chemotaxis protein MotB
D CJS3_1122 Transmembrane protein K13626 fliW; flagellar assembly factor FliW
D CJS3_0537 Possible flagellar protein K06603 flaG; flagellar protein FlaG
D CJS3_0064 flhF; Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CJS3_0063 fleN; Flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D CJS3_0869 Putative processing peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cjs04812]
D CJS3_0266 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJS3_0747 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJS3_0746 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CJS3_0099 parA; Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D CJS3_0100 parB; Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cjs04147]
D CJS3_0511 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CJS3_1754 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJS3_1498 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJS3_1497 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CJS3_0382 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJS3_0320 Alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CJS3_1264 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJS3_0807 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJS3_1613 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJS3_1106 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CJS3_0462 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJS3_0939 HIT-family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CJS3_1209 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJS3_0629 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJS3_0969 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CJS3_0973 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJS3_0656 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJS3_0884 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJS3_0750 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJS3_1044 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CJS3_0932 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJS3_0997 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJS3_1496 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cjs02048]
D CJS3_1602 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D CJS3_1601 cas2; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CJS3_1628 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CJS3_1630 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CJS3_1632 hsdM; Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CJS3_0732 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJS3_0031 Putative type IIS restriction/modification enzyme, N-terminal protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CJS3_0204 dam; DNA modification methylase (Adenine-specific methyltransferase) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CJS3_1330 Adenine-specific methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CJS3_0619 Type III restriction-modification system DNA endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D CJS3_0618 Type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CJS3_1378 HNH endonuclease domain protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CJS3_0138 McrBC restriction endonuclease system, McrB subunit, putative K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CJS3_0139 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D CJS3_1375 toxin-antitoxin protein, putative K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CJS3_1268 Ribbon-helix-helix protein, copG family domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D CJS3_0747 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJS3_0266 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJS3_0889 gltX-1; Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_1385 gltX-2; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJS3_0229 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cjs01504]
D CJS3_0285 Beta-lactamase K19210 blaOXA-61; beta-lactamase class D OXA-61 [EC:3.5.2.6]
D CJS3_1394 Aminoglycoside N3'-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D CJS3_1408 hypothetical protein K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D CJS3_pTet0010 TetO K18220 tetM; ribosomal protection tetracycline resistance protein
D CJS3_0453 Putative integral membrane protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CJS3_0357 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJS3_0356 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJS3_0355 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJS3_1080 Probable outer membrane component of multidrug efflux pump K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cjs03100]
D CJS3_1859 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJS3_1809 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJS3_1828 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJS3_1815 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJS3_1853 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJS3_1854 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJS3_1824 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJS3_1842 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJS3_1843 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CJS3_1835 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJS3_1839 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJS3_1850 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CJS3_1826 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJS3_1813 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJS3_1837 tRNA-Arg K14224 tRNA-Glu; tRNA Glu
D CJS3_1848 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJS3_1833 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJS3_1821 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJS3_1855 tRNA-His K14226 tRNA-His; tRNA His
D CJS3_1810 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJS3_1816 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJS3_1829 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJS3_1849 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJS3_1852 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJS3_1834 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJS3_1832 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJS3_1838 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJS3_1841 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJS3_1857 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJS3_1825 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJS3_1844 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJS3_1845 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CJS3_1856 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJS3_1846 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJS3_1858 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJS3_1851 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJS3_1819 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJS3_1822 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJS3_1823 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CJS3_1820 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CJS3_1860 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJS3_1836 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJS3_1840 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJS3_1847 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CJS3_1808 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1814 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1827 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJS3_1811 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJS3_1830 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJS3_1817 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJS3_1812 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJS3_1831 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJS3_1818 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CJS3_1623 MdaB-like protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D CJS3_0919 Cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D CJS3_0918 Cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D CJS3_0627 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CJS3_1159 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CJS3_0369 Putative sulfite oxidase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D CJS3_0349 ccpA-2; Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CJS3_0020 ccpA-1; Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CJS3_0261 Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJS3_0827 tpx; Thiol peroxidase, Tpx-type K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJS3_1311 hydB; Quinone-reactive Ni/Fe-hydrogenase large chain K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D CJS3_1494 hydrogenase, (NiFe)/(NiFeSe) small subunit family K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D CJS3_1312 hydA; Quinone-reactive Ni/Fe-hydrogenase small chain precursor K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D CJS3_0602 ftn; Nonheme iron-containing ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CJS3_1641 arsC; Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CJS3_0217 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CJS3_1225 Putative cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CJS3_0353 Oxygen-independent coproporphyrinogen III oxidase, putative K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]
D CJS3_1142 cutE; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CJS3_1156 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CJS3_1084 putative arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D CJS3_1172 pglB; Oligosaccharyltransferase PglB K17251 pglB; undecaprenyl-diphosphooligosaccharide---protein glycotransferase [EC:2.4.99.19]
D CJS3_0397 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CJS3_1170 Lipid carrier : UDP-N-acetylgalactosaminyltransferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D CJS3_1009 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CJS3_1051 phosphohistidine phosphatase SixA, putative K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CJS3_0634 ycfH; Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CJS3_1029 Thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CJS3_0187 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CJS3_1485 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CJS3_0184 YjeF protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CJS3_0480 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D CJS3_1751 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D CJS3_1203 Lead; Copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D CJS3_0075 ykgE; Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CJS3_0074 ykgF; Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CJS3_0073 ykgG; Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CJS3_1587 fdhD; Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D CJS3_0228 nifU; Iron-sulfur cluster assembly scaffold protein NifU K13819 K13819; NifU-like protein
D CJS3_0833 napD; Periplasmic nitrate reductase component NapD K02570 napD; periplasmic nitrate reductase NapD
D CJS3_1479 fldA; Flavodoxin 1 K03839 fldA; flavodoxin I
D CJS3_0829 napG; Ferredoxin-type protein NapG (periplasmic nitrate reductase) K02573 napG; ferredoxin-type protein NapG
D CJS3_0830 napH; Polyferredoxin NapH (periplasmic nitrate reductase) K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CJS3_0770 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CJS3_1190 Beta-1,4-galactosyltransferase K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D CJS3_0885 Putative ATP/GTP binding protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CJS3_1343 hypothetical protein K07741 antB; anti-repressor protein
C 99974 Translation
C 99975 Protein processing
D CJS3_0992 Putative lipoprotein K03668 hslJ; heat shock protein HslJ
D CJS3_1154 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CJS3_0189 tig; Cell division trigger factor K03545 tig; trigger factor
D CJS3_0368 membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D CJS3_1152 smpB; tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D CJS3_0614 hypC; [NiFe] hydrogenase metallocenter assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D CJS3_0615 hypD; [NiFe] hydrogenase metallocenter assembly protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CJS3_0616 hypE; [NiFe] hydrogenase metallocenter assembly protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CJS3_0612 hypF; [NiFe] hydrogenase metallocenter assembly protein HypF K04656 hypF; hydrogenase maturation protein HypF
D CJS3_0186 Mg(2+) Chelatase family protein / ComM-related protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D CJS3_1130 Endonuclease III K07457 K07457; endonuclease III related protein
D CJS3_0147 Predicted endonuclease K07460 yraN; putative endonuclease
D CJS3_0624 dprA; SMF family protein, DNA processing chain A (dprA) K04096 smf; DNA processing protein
D CJS3_0194 Helicase-like protein K07478 ycaJ; putative ATPase
D CJS3_pTet0043 cpp22 K06919 K06919; putative DNA primase/helicase
D CJS3_1178 wlaX; Polysaccharide biosynthesis protein WlaX K07501 K07501; 3'-5' exonuclease
D CJS3_0802 transposase K07496 K07496; putative transposase
D CJS3_0685 bacteriophage DNA transposition protein A, putative K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CJS3_1724 Transcriptional regulatory protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CJS3_1082 Acriflavin resistance protein / Multidrug efflux system CmeDEF K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CJS3_0199 CitM, H+/citrate symporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D CJS3_0644 Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CJS3_1236 low-affinity inorganic phosphate transporter, putative K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CJS3_0976 Putative transmembrane transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJS3_0977 Putative transmembrane transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJS3_0591 Putative sodium-dependent transmembrane transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJS3_0944 Putative amino-acid transport protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D CJS3_1001 hypothetical protein K06346 jag; spoIIIJ-associated protein
D CJS3_1620 Allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
C 99993 Cell motility
D CJS3_0090 Putative lipoprotein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D CJS3_0039 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CJS3_0364 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CJS3_0985 lolA; Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D CJS3_1469 putative periplasmic protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CJS3_1508 kpsS; Capsular polysaccharide export system protein KpsS K07265 kpsS; capsular polysaccharide export protein
D CJS3_1509 kpsC; Capsular polysaccharide export system protein KpsC K07266 kpsC; capsular polysaccharide export protein
C 99994 Others
D CJS3_0071 Hemerythrin-like iron-binding protein K07216 hr; hemerythrin
D CJS3_0072 Hemerythrin-like iron-binding protein K07216 hr; hemerythrin
D CJS3_1267 Hemerythrin-like iron-binding protein K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CJS3_0389 Putative integral membrane protein K03558 cvpA; membrane protein required for colicin V production
D CJS3_1610 Possible periplasmic protein K03796 bax; Bax protein
D CJS3_0457 hypothetical protein K06886 glbN; hemoglobin
D CJS3_1255 rbn; Ribonuclease BN K07058 K07058; membrane protein
D CJS3_0394 membrane protein K03749 dedD; DedD protein
D CJS3_0181 phnA; Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D CJS3_0878 Ankyrin repeat-containing possible periplasmic protein K06867 K06867; uncharacterized protein
D CJS3_1483 Ankyrin-repeat containing protein K06867 K06867; uncharacterized protein
D CJS3_1324 Putative fibronectin domain-containing lipoprotein K06882 K06882; uncharacterized protein
D CJS3_0716 baseplate assembly protein W, putative K06903 W; Bacteriophage baseplate protein W
D CJS3_0731 tail protein D, putative K06905 D; Bacteriophage probable baseplate hub protein
D CJS3_0729 phage tail protein, putative K06906 gpU; phage tail protein
D CJS3_0723 major tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D CJS3_0724 phage major tail tube protein, putative K06908 FII; Bacteriophage tail tube protein
D CJS3_0840 hypothetical protein K06921 K06921; uncharacterized protein
D CJS3_1131 Putative ATP/GTP-binding protein K06923 K06923; uncharacterized protein
D CJS3_0873 CoA-binding domain protein K06929 K06929; uncharacterized protein
D CJS3_0487 hypothetical protein K06940 K06940; uncharacterized protein
D CJS3_0025 Putative transmembrane symporter K06956 K06956; uncharacterized protein
D CJS3_0762 ylqC; KH domain RNA binding protein YlqC K06960 K06960; uncharacterized protein
D CJS3_0058 Putative periplasmic protein K06992 K06992; uncharacterized protein
D CJS3_1471 membrane protein K07003 K07003; uncharacterized protein
D CJS3_1639 membrane protein K07089 K07089; uncharacterized protein
D CJS3_0334 membrane protein K07090 K07090; uncharacterized protein
D CJS3_1549 yfcA; Putative membrane protein YfcA K07090 K07090; uncharacterized protein
D CJS3_0144 Putative phosphatase K07093 K07093; uncharacterized protein
D CJS3_0923 Predicted phosphohydrolase (DHH superfamily) K07097 K07097; uncharacterized protein
D CJS3_0890 Predicted phosphohydrolase K07098 K07098; uncharacterized protein
D CJS3_1579 membrane protein K07112 K07112; uncharacterized protein
D CJS3_0403 Putative periplasmic protein K07126 K07126; uncharacterized protein
D CJS3_1611 Putative helix-turn-helix containing protein K07133 K07133; uncharacterized protein
D CJS3_0757 Zn-ribbon protein, possibly nucleic acid-binding protein K07164 K07164; uncharacterized protein
D CJS3_1003 yidD; YidD K08998 K08998; uncharacterized protein
D CJS3_0563 Hypothetical protein K09117 K09117; uncharacterized protein
D CJS3_1573 membrane copper tolerance protein, putative K09792 K09792; uncharacterized protein
D CJS3_0441 Hypothetical protein K09794 K09794; uncharacterized protein
D CJS3_0600 Putative periplasmic protein K09795 K09795; uncharacterized protein
D CJS3_0034 Putative periplasmic protein K09797 K09797; uncharacterized protein
D CJS3_0623 Putative periplasmic protein K09798 K09798; uncharacterized protein
D CJS3_1575 Hypothetical protein probably associated with Carbamoyl-phosphate synthase K09804 K09804; uncharacterized protein
D CJS3_1683 hypothetical protein K09805 K09805; uncharacterized protein
D CJS3_1116 hypothetical protein K09824 virK; uncharacterized protein
D CJS3_0088 Putative lipoprotein K09859 K09859; uncharacterized protein
D CJS3_1035 yaaA; UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D CJS3_0874 membrane protein K09943 K09943; uncharacterized protein
D CJS3_1058 TrkA domain protein K09944 K09944; uncharacterized protein
D CJS3_1530 Hypothetical protein K09979 K09979; uncharacterized protein
D CJS3_1206 hypothetical protein K09981 K09981; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024