+D GENES KO #

  KEGG Orthology (KO) - Chlamydia pecorum E58

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cpm00010] D G5S_0002 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D G5S_0983 fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D G5S_0985 pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D G5S_0856 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D G5S_0651 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D G5S_0421 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D G5S_0368 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D G5S_0179 pgm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D G5S_0242 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D G5S_1050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D G5S_0832 pdhA; pyruvate dehydrogenase, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D G5S_0831 pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D G5S_0830 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D G5S_0191 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cpm00020] D G5S_0761 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D G5S_0762 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D G5S_0542 2-oxo acid dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D G5S_0060 sucD; succinyl-Coa synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D G5S_0061 sucC; Succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D G5S_0249 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D G5S_0248 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D G5S_0250 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D G5S_0016 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D G5S_0001 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D G5S_0191 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D G5S_0832 pdhA; pyruvate dehydrogenase, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D G5S_0831 pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D G5S_0830 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cpm00030] D G5S_0002 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D G5S_0902 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D G5S_0901 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D G5S_0778 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D G5S_0954 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D G5S_0140 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D G5S_1064 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D G5S_1011 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D G5S_1081 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D G5S_0856 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D G5S_0983 fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D G5S_0985 pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D G5S_0954 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cpm00051] D G5S_0682 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8] D G5S_0983 fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D G5S_0985 pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D G5S_0856 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D G5S_0651 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D G5S_0983 fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:cpm00500] D G5S_0442 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D G5S_0089 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D G5S_0600 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D G5S_0829 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D G5S_0808 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D G5S_0750 glycosyl hydrolase family protein K01214 ISA; isoamylase [EC:3.2.1.68] D G5S_0002 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpm00520] D G5S_0066 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D G5S_0067 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D G5S_0292 grad; udp-glcnac pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D G5S_0185 UTP--glucose-1-phosphate uridylyltransferase family protein K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D G5S_0488 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D G5S_0048 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D G5S_0002 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D G5S_0682 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8] D G5S_0442 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cpm00620] D G5S_0832 pdhA; pyruvate dehydrogenase, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D G5S_0831 pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D G5S_0830 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D G5S_1050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D G5S_0720 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D G5S_0952 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D G5S_0951 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D G5S_0684 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D G5S_0001 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D G5S_0016 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D G5S_0191 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpm00630] D G5S_0001 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D G5S_0551 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D G5S_0698 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:cpm00640] D G5S_0669 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D G5S_0720 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D G5S_0952 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D G5S_0951 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D G5S_0684 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D G5S_0061 sucC; Succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D G5S_0060 sucD; succinyl-Coa synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D G5S_0249 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D G5S_0248 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D G5S_0250 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit C 00660 C5-Branched dibasic acid metabolism D G5S_0061 sucC; Succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D G5S_0060 sucD; succinyl-Coa synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D G5S_0651 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cpm00190] D G5S_0249 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D G5S_0248 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D G5S_0250 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D G5S_1045 cydA; cytochrome oxidase chain I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D G5S_1044 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D G5S_1059 atpA; V-type ATP synthase alpha chain K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D G5S_1058 atpB; V-type ATP synthase beta chain K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D G5S_1057 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D G5S_1061 ATP synthase subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D G5S_1056 ntpI; V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D G5S_0114 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cpm00680] D G5S_0551 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D G5S_0242 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D G5S_0001 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D G5S_0856 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D G5S_0983 fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D G5S_0179 pgm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:cpm00920] D G5S_0112 Inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D G5S_0517 sulfite reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cpm00061] D G5S_0720 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D G5S_0952 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D G5S_0951 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D G5S_0684 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D G5S_0842 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D G5S_0840 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D G5S_0839 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D G5S_0116 acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D G5S_0841 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D G5S_1097 conserved hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D G5S_0394 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D G5S_0728 putative enoyl-(acyl-carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cpm00561] D G5S_0076 glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D G5S_0073 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D G5S_0111 snglycerol-3-p acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D G5S_0491 glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:cpm00564] D G5S_0187 Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D G5S_0076 glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D G5S_0111 snglycerol-3-p acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D G5S_0491 glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D G5S_0493 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D G5S_0054 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D G5S_0203 Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D G5S_0090 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D G5S_0434 glycerol-3-P phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D G5S_0930 phospholipase D family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cpm00230] D G5S_1081 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D G5S_0880 surE; Acid phosphatase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D G5S_0763 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D G5S_0926 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D G5S_0429 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D G5S_0267 Ham1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D G5S_0927 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D G5S_1027 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D G5S_0053 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D G5S_0052 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D G5S_0139 AMP nucleosidase, putative K01241 amn; AMP nucleosidase [EC:3.2.2.4] D G5S_0898 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D G5S_0019 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:cpm00240] D G5S_0441 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D G5S_0349 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D G5S_0429 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D G5S_0658 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D G5S_0904 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D G5S_0492 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D G5S_0880 surE; Acid phosphatase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D G5S_0747 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D G5S_0053 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D G5S_0052 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D G5S_0865 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D G5S_0685 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpm00250] D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D G5S_0066 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:cpm00260] D G5S_1094 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D G5S_1095 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D G5S_0551 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D G5S_0179 pgm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D G5S_0698 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D G5S_0054 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D G5S_1083 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D G5S_1084 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cpm00270] D G5S_0763 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D G5S_1094 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D G5S_1095 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D G5S_0001 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:cpm00280] D G5S_0113 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D G5S_0669 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpm00290] D G5S_0113 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:cpm00300] D G5S_1094 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D G5S_1095 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D G5S_1093 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D G5S_1096 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D G5S_0553 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D G5S_0579 aspartate transaminase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D G5S_0715 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D G5S_0133 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cpm00310] D G5S_0762 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D G5S_0542 2-oxo acid dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:cpm00330] D G5S_1111 Pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:cpm00380] D G5S_1082 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D G5S_0762 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D G5S_0542 2-oxo acid dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpm00400] D G5S_0589 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D G5S_1106 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D G5S_1107 aroE; 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D G5S_1104 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D G5S_1103 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D G5S_1105 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D G5S_1087 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D G5S_1086 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D G5S_1083 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D G5S_1084 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D G5S_0596 phnP; metal dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:cpm00450] D G5S_0359 aminotransferase, class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D G5S_0821 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D G5S_1024 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D G5S_0551 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cpm00470] D G5S_0127 murC; MurC/ddl bifunctional enzyme K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D G5S_0131 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D G5S_0553 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:cpm00480] D G5S_0753 lap; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D G5S_0778 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D G5S_0902 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:cpm00540] D G5S_0395 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D G5S_0393 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D G5S_0834 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D G5S_0069 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D G5S_0540 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D G5S_0543 carbohydrate isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D G5S_0321 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D G5S_0905 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D G5S_0988 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D G5S_1049 acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpm00541] D G5S_0682 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8] D G5S_0292 grad; udp-glcnac pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cpm00550] D G5S_0488 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D G5S_0048 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D G5S_0127 murC; MurC/ddl bifunctional enzyme K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D G5S_0131 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D G5S_0715 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D G5S_0133 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D G5S_0494 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D G5S_0132 mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D G5S_0128 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D G5S_0714 probable penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D G5S_0373 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cpm00730] D G5S_0180 nifs-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0743 Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0647 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D G5S_0898 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D G5S_0019 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cpm00740] D G5S_0169 Riboflavin biosynthesis protein ribA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D G5S_0170 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D G5S_0168 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D G5S_0536 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D G5S_0815 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D G5S_0876 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:cpm00760] D G5S_0880 surE; Acid phosphatase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:cpm00770] D G5S_0438 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D G5S_0822 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:cpm00780] D G5S_0116 acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D G5S_0841 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D G5S_1097 conserved hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D G5S_0394 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D G5S_0728 putative enoyl-(acyl-carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D G5S_0109 oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D G5S_1099 oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D G5S_1101 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D G5S_1100 Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D G5S_1098 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D G5S_0175 bira; biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cpm00785] D G5S_0210 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D G5S_0430 lipoate protein ligase-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D G5S_0695 lplA; lipoate protein ligase-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D G5S_0832 pdhA; pyruvate dehydrogenase, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D G5S_0831 pyruvate dehydrogenase beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D G5S_0830 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D G5S_0761 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D G5S_0762 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D G5S_0542 2-oxo acid dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D G5S_0669 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D G5S_0698 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cpm00790] D G5S_0169 Riboflavin biosynthesis protein ribA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D G5S_1085 trpF; N-(5'phosphoribosyl)anthranilate isomerase K22100 trpF; 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one isomerase/dehydratase [EC:4.2.1.160] C 00670 One carbon pool by folate [PATH:cpm00670] D G5S_0798 folD; FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D G5S_0551 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D G5S_0396 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D G5S_0281 formyltetrahydrofolate cycloligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cpm00860] D G5S_0504 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D G5S_0329 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D G5S_1008 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D G5S_0298 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D G5S_0678 Porphobilinogen deaminase, dipyromethane cofactor binding domain protein K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D G5S_0550 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D G5S_0144 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D G5S_0145 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D G5S_0146 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D G5S_0446 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpm00130] D G5S_0875 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D G5S_0876 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D G5S_0556 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D G5S_0559 radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D G5S_0121 conserved hypothetical protein TIGR00423 K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cpm00900] D G5S_0647 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D G5S_0790 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D G5S_0479 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D G5S_0082 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D G5S_0518 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D G5S_0764 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D G5S_0012 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D G5S_0876 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D G5S_0293 geranyl transtransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D G5S_0494 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D G5S_0140 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:cpm00261] D G5S_1094 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D G5S_1095 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D G5S_1093 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D G5S_1096 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D G5S_0840 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D G5S_0841 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D G5S_1097 conserved hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D G5S_0728 putative enoyl-(acyl-carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D G5S_0842 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D G5S_1107 aroE; 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D G5S_0805 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D G5S_0876 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cpm03020] D G5S_1066 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D G5S_1065 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D G5S_0419 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cpm03010] D G5S_0820 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D G5S_0351 rpsB; 30S ribosomal protein K02967 RP-S2; small subunit ribosomal protein S2 D G5S_0404 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D G5S_0310 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D G5S_0414 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D G5S_0085 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D G5S_0514 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D G5S_0411 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D G5S_0895 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D G5S_0516 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D G5S_0418 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D G5S_0513 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D G5S_0417 rpsM; ribosomal protein S13p/S18e K02952 RP-S13; small subunit ribosomal protein S13 D G5S_0100 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14 D G5S_0033 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D G5S_1031 rpsP; 30S ribosomal protein K02959 RP-S16; small subunit ribosomal protein S16 D G5S_0407 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D G5S_0084 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D G5S_0402 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D G5S_0286 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D G5S_0667 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D G5S_1070 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D G5S_0401 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D G5S_0398 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D G5S_0399 rplD; ribosomal protein L4/L1 family K02926 RP-L4; large subunit ribosomal protein L4 D G5S_0410 50S ribosomal protein K02931 RP-L5; large subunit ribosomal protein L5 D G5S_0412 50S ribosomal protein K02933 RP-L6; large subunit ribosomal protein L6 D G5S_1068 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D G5S_0083 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D G5S_1069 50S ribosomal protein K02864 RP-L10; large subunit ribosomal protein L10 D G5S_1071 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D G5S_0894 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D G5S_0408 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D G5S_0415 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D G5S_0405 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D G5S_0420 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D G5S_0413 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D G5S_1029 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D G5S_0042 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D G5S_0520 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D G5S_0403 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D G5S_0400 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D G5S_0409 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D G5S_0087 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D G5S_0521 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D G5S_0806 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D G5S_0406 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D G5S_1036 rpmE; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D G5S_0890 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D G5S_0043 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D G5S_0101 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D G5S_0156 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D G5S_0154 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D G5S_0153 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpm00970] D G5S_0302 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D G5S_0908 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D G5S_0322 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D G5S_0264 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D G5S_0468 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D G5S_0717 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D G5S_1019 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D G5S_0878 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D G5S_0134 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D G5S_0088 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D G5S_0347 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D G5S_0194 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D G5S_0352 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D G5S_0158 tRNA-His K14226 tRNA-His; tRNA His D G5S_0909 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D G5S_0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0474 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0387 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0463 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0423 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0346 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D G5S_0986 tRNA-Met K14230 tRNA-Met; tRNA Met D G5S_0987 tRNA-Met K14230 tRNA-Met; tRNA Met D G5S_1080 tRNA-Met K14230 tRNA-Met; tRNA Met D G5S_0519 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D G5S_0771 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D G5S_0294 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D G5S_0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D G5S_0525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D G5S_0641 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D G5S_0433 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D G5S_0883 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D G5S_0342 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D G5S_1076 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D G5S_1074 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D G5S_0884 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D G5S_0879 tRNA-Val K14237 tRNA-Val; tRNA Val D G5S_0050 tRNA-Val K14237 tRNA-Val; tRNA Val D G5S_0504 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D G5S_0628 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D G5S_0629 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D G5S_0627 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D G5S_0141 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D G5S_0383 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D G5S_0091 edd1; Glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D G5S_0235 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D G5S_0171 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D G5S_0103 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D G5S_1024 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D G5S_0396 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D G5S_1054 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D G5S_0989 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D G5S_1039 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D G5S_0104 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D G5S_0489 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D G5S_0573 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D G5S_0381 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D G5S_0041 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D G5S_0458 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D G5S_0777 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D G5S_0240 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cpm03060] D G5S_0416 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D G5S_1073 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D G5S_0652 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D G5S_0496 protein export proteins secd/secf K12257 secDF; SecD/SecF fusion protein D G5S_0151 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D G5S_0825 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D G5S_0201 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D G5S_1032 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D G5S_0063 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D G5S_1038 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D G5S_0532 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cpm04122] D G5S_0180 nifs-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0743 Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0693 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:cpm03018] D G5S_0242 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D G5S_0034 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D G5S_0568 conserved hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D G5S_0439 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D G5S_0983 fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D G5S_0569 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D G5S_0265 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_1017 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_0068 poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D G5S_0198 pcnB; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cpm03030] D G5S_0724 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0390 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0379 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D G5S_0866 DNA-directed DNA polymerase III chain K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0677 dnaH; DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0756 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D G5S_0795 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D G5S_0432 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D G5S_0094 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D G5S_0752 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein D G5S_1028 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D G5S_0634 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D G5S_0993 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cpm03410] D G5S_0205 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D G5S_0269 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D G5S_0736 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D G5S_0567 methylpurine-DNA glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D G5S_0311 DNA-(Apurinic or apyrimidinic site) lyase K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D G5S_0500 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D G5S_0993 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cpm03420] D G5S_0142 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D G5S_1051 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D G5S_0241 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D G5S_0097 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D G5S_0271 ATP-dependent helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D G5S_0993 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cpm03430] D G5S_0095 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D G5S_0228 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D G5S_0271 ATP-dependent helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D G5S_0650 xseA; exonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D G5S_0649 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D G5S_0500 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D G5S_0752 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein D G5S_0379 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D G5S_0795 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D G5S_0866 DNA-directed DNA polymerase III chain K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0677 dnaH; DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0756 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D G5S_0724 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0390 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0993 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cpm03440] D G5S_0500 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D G5S_0752 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein D G5S_0793 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D G5S_0465 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D G5S_0838 recR; recombination protein RecR K06187 recR; recombination protein RecR D G5S_0283 recA; recA protein K03553 recA; recombination protein RecA D G5S_0428 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D G5S_0748 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D G5S_0427 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D G5S_0305 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D G5S_0307 exodeoxyribonuclease v, gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D G5S_1023 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D G5S_0288 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D G5S_0379 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D G5S_0795 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D G5S_0866 DNA-directed DNA polymerase III chain K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0677 dnaH; DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0756 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D G5S_0724 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0390 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0107 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus D G5S_0078 insulinase family/proteinase III K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cpm02010] D G5S_1005 ABC transporter, periplasmic substrate-binding protein, putative K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D G5S_1007 ABC transporter, permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D G5S_1006 mkl; ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D G5S_0594 glnH; amino acid ABC transporter, periplasmic amino acid-binding protein K09996 artJ; arginine transport system substrate-binding protein D G5S_0965 glnP; amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein D G5S_0964 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D G5S_0860 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein D G5S_0859 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein D G5S_0858 dipeptide transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein D G5S_0968 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D G5S_0970 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D G5S_0974 peptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein D G5S_0976 peptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein D G5S_0978 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D G5S_0977 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D G5S_0524 lipo; solute binding protein K09815 znuA; zinc transport system substrate-binding protein D G5S_0523 zinc; ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D G5S_0786 ssaB; periplasmic substrate binding protein TroA K11707 troA; manganese/zinc/iron transport system substrate-binding protein D G5S_0788 ABC transporter, permease protein, putative K11708 troC; manganese/zinc/iron transport system permease protein D G5S_0789 ABC transporter, permease protein K11709 troD; manganese/zinc/iron transport system permease protein D G5S_0787 troB; ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D G5S_0892 permease, putative domain protein K09808 lolC_E; lipoprotein-releasing system permease protein D G5S_0893 ABC transporter ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D G5S_0037 YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D G5S_0038 YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D G5S_0319 abcT2; ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:cpm02060] D G5S_0674 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D G5S_0673 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D G5S_0686 PTS fructose-specific enzyme IIBC component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D G5S_0687 Pts IIA protein with HTH DNA-Binding domain protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cpm03070] D G5S_0340 type III secretion protein SctC K03219 yscC; type III secretion protein C D G5S_0811 conserved hypothetical protein K04058 yscW; type III secretion protein W D G5S_0211 type III secretion protein SctJ K03222 yscJ; type III secretion protein J D G5S_0214 type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R D G5S_0215 YopT tranlocation T K03228 yscT; type III secretion protein T D G5S_0813 type III secretion protein, hrpY/hrcU family K03229 yscU; type III secretion protein U D G5S_0812 type III secretion protein, HrcV family K03230 yscV; type III secretion protein V D G5S_0335 type III secretion cytoplasmic ATPase SctN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D G5S_0213 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L D G5S_0225 Bacterial type II and III secretion system protein K02453 gspD; general secretion pathway protein D D G5S_0223 pilC; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D G5S_0224 Type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D G5S_0496 protein export proteins secd/secf K12257 secDF; SecD/SecF fusion protein D G5S_1073 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D G5S_0652 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D G5S_0416 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D G5S_0151 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D G5S_0825 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D G5S_0201 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D G5S_0063 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D G5S_1032 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:cpm02020] D G5S_0059 serine proteinase, HtrA/DegQ/DegS family K04771 degP; serine protease Do [EC:3.4.21.107] D G5S_0775 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D G5S_0827 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D G5S_0707 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D G5S_0380 sugar phosphate sensor protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D G5S_0472 sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D G5S_0469 rrp; acetate metabolism regulatory protein K07714 atoC; two-component system, NtrC family, response regulator AtoC D G5S_0272 RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D G5S_1045 cydA; cytochrome oxidase chain I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D G5S_1044 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cpm02024] D G5S_0855 amino acid antiporter K20265 gadC; glutamate:GABA antiporter D G5S_0170 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D G5S_0968 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D G5S_0970 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D G5S_0974 peptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein D G5S_0976 peptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein D G5S_0978 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D G5S_0977 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D G5S_0972 peptide ABC transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D G5S_0973 peptide ABC transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D G5S_0451 oligopeptide ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D G5S_0452 oppB; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D G5S_0454 oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D G5S_0365 ABC ATPase dipeptide transport K02031 ddpD; peptide/nickel transport system ATP-binding protein D G5S_0825 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D G5S_0496 protein export proteins secd/secf K12257 secDF; SecD/SecF fusion protein D G5S_1073 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D G5S_0652 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D G5S_0416 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D G5S_0151 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D G5S_0201 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D G5S_0063 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D G5S_1032 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D G5S_0338 flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:cpm02040] D G5S_0182 flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D G5S_0183 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D G5S_0184 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D G5S_0338 flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D G5S_0772 flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA D G5S_0284 sigA; RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D G5S_0272 RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D G5S_0775 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D G5S_0242 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cpm01501] D G5S_0968 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D G5S_0970 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D G5S_0974 peptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein D G5S_0976 peptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein D G5S_0978 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D G5S_0977 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D G5S_0714 probable penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cpm01502] D G5S_0127 murC; MurC/ddl bifunctional enzyme K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D G5S_0133 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D G5S_0132 mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D G5S_0128 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpm01503] D G5S_0716 N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D G5S_0059 serine proteinase, HtrA/DegQ/DegS family K04771 degP; serine protease Do [EC:3.4.21.107] D G5S_0395 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cpm01000] C 01001 Protein kinases [BR:cpm01001] D G5S_1052 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D G5S_0375 sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D G5S_0472 sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cpm01009] D G5S_0983 fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D G5S_0742 PP2C phosphatase family K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cpm01002] D G5S_0532 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D G5S_0927 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D G5S_0956 inclusion membrane protein A, putative K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D G5S_0066 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D G5S_0738 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D G5S_1014 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D G5S_0078 insulinase family/proteinase III K01408 IDE; insulysin [EC:3.4.24.56] D G5S_0056 metalloprotease, insulinase family K06972 PITRM1; presequence protease [EC:3.4.24.-] D G5S_0753 lap; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D G5S_0022 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D G5S_0227 metallopeptidase family M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D G5S_1003 ap-t; aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D G5S_0035 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D G5S_0791 metalloproteinase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D G5S_0059 serine proteinase, HtrA/DegQ/DegS family K04771 degP; serine protease Do [EC:3.4.21.107] D G5S_0373 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D G5S_0196 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D G5S_0552 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D G5S_0664 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D G5S_1038 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D G5S_0509 prc; carboxy-terminal proteinase precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:cpm01003] D G5S_0089 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpm01005] D G5S_0395 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D G5S_0069 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D G5S_0393 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D G5S_0834 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D G5S_0540 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D G5S_1049 acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D G5S_0988 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D G5S_0321 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D G5S_0905 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D G5S_0543 carbohydrate isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpm01011] D G5S_0488 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D G5S_0048 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D G5S_0127 murC; MurC/ddl bifunctional enzyme K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D G5S_0131 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D G5S_0715 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D G5S_0132 mraY; muramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D G5S_0128 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D G5S_0312 conserved hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D G5S_0714 probable penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D G5S_0373 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D G5S_0956 inclusion membrane protein A, putative K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D G5S_0716 N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cpm01004] D G5S_0840 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D G5S_0839 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D G5S_0116 acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D G5S_0841 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D G5S_1097 conserved hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D G5S_0394 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D G5S_0728 putative enoyl-(acyl-carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D G5S_0076 glycerol-3-P acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D G5S_0073 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D G5S_0111 snglycerol-3-p acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D G5S_0491 glycerol-3-P acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cpm01006] D G5S_0293 geranyl transtransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D G5S_0494 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D G5S_0122 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D G5S_0875 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:cpm01007] D G5S_0504 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D G5S_0777 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D G5S_0240 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D G5S_0103 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D G5S_0489 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D G5S_1024 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D G5S_1039 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D G5S_1054 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D G5S_0989 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D G5S_0104 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D G5S_0383 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D G5S_0381 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D G5S_0171 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D G5S_0573 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D G5S_0235 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D G5S_0141 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D G5S_0041 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D G5S_0458 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D G5S_0303 aromatic AA aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D G5S_0579 aspartate transaminase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D G5S_0109 oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D G5S_1099 oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D G5S_1101 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D G5S_1008 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cpm03000] D G5S_0175 bira; biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D G5S_1088 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D G5S_0363 parB; chromosome partioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D G5S_0966 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D G5S_0572 Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor D G5S_1009 conserved hypothetical protein K07735 algH; putative transcriptional regulator D G5S_0533 dnak suppressor K06204 dksA; RNA polymerase-binding transcription factor D G5S_0534 nrdR; transcriptional regulator, NrdR family K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:cpm03021] D G5S_0419 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D G5S_1066 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D G5S_1065 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D G5S_0284 sigA; RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D G5S_0272 RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D G5S_0775 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D G5S_0819 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D G5S_0047 conserved hypothetical protein K03625 nusB; transcription antitermination protein NusB D G5S_1072 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D G5S_0243 regulatory protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D G5S_0375 sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D G5S_0533 dnak suppressor K06204 dksA; RNA polymerase-binding transcription factor D G5S_0439 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cpm03019] D G5S_0075 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D G5S_0680 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D G5S_0568 conserved hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D G5S_0242 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D G5S_0034 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D G5S_0439 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D G5S_0983 fructose-6-P phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D G5S_0569 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D G5S_0265 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_1017 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_0068 poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D G5S_0198 pcnB; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:cpm03011] D G5S_0820 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D G5S_0351 rpsB; 30S ribosomal protein K02967 RP-S2; small subunit ribosomal protein S2 D G5S_0404 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D G5S_0310 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D G5S_0414 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D G5S_0085 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D G5S_0514 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D G5S_0411 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D G5S_0895 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D G5S_0516 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D G5S_0418 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D G5S_0513 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D G5S_0417 rpsM; ribosomal protein S13p/S18e K02952 RP-S13; small subunit ribosomal protein S13 D G5S_0100 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14 D G5S_0033 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D G5S_1031 rpsP; 30S ribosomal protein K02959 RP-S16; small subunit ribosomal protein S16 D G5S_0407 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D G5S_0084 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D G5S_0402 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D G5S_0286 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D G5S_0667 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D G5S_1070 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D G5S_0401 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D G5S_0398 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D G5S_0399 rplD; ribosomal protein L4/L1 family K02926 RP-L4; large subunit ribosomal protein L4 D G5S_0410 50S ribosomal protein K02931 RP-L5; large subunit ribosomal protein L5 D G5S_0412 50S ribosomal protein K02933 RP-L6; large subunit ribosomal protein L6 D G5S_0083 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D G5S_1069 50S ribosomal protein K02864 RP-L10; large subunit ribosomal protein L10 D G5S_1071 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D G5S_1068 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D G5S_0894 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D G5S_0408 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D G5S_0415 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D G5S_0405 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D G5S_0420 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D G5S_0413 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D G5S_1029 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D G5S_0042 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D G5S_0520 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D G5S_0403 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D G5S_0400 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D G5S_0409 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D G5S_0521 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D G5S_0806 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D G5S_0406 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D G5S_1036 rpmE; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D G5S_0890 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D G5S_0043 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D G5S_0101 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D G5S_0087 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D G5S_0153 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D G5S_0156 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D G5S_0154 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cpm03009] D G5S_0680 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D G5S_0522 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D G5S_0533 dnak suppressor K06204 dksA; RNA polymerase-binding transcription factor D G5S_0819 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D G5S_0047 conserved hypothetical protein K03625 nusB; transcription antitermination protein NusB D G5S_1072 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D G5S_0645 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D G5S_0372 RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D G5S_0444 methyltransferase, putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D G5S_0712 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D G5S_0758 SAM-dependent methytransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D G5S_0537 sam dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D G5S_0177 RNA pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D G5S_0735 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D G5S_0324 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D G5S_0889 MiaB-like tRNA modifying enzyme YliG, TIGR01125 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D G5S_0075 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D G5S_0903 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D G5S_0199 GTP-binding protein engA K03977 engA; GTPase D G5S_0597 GTP binding protein K03665 hflX; GTPase D G5S_0869 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D G5S_0817 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D G5S_0117 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D G5S_0564 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D G5S_0814 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D G5S_0074 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cpm03016] D G5S_0662 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D G5S_0504 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D G5S_0573 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D G5S_1039 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D G5S_0989 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D G5S_1024 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D G5S_0489 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D G5S_0104 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D G5S_0383 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D G5S_0141 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D G5S_0235 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D G5S_0171 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D G5S_0103 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D G5S_1054 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D G5S_0381 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D G5S_0041 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D G5S_0458 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D G5S_0777 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D G5S_0240 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D G5S_0583 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D G5S_0478 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D G5S_0816 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D G5S_0180 nifs-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0743 Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0869 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D G5S_0122 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D G5S_0204 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D G5S_0431 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D G5S_0112 Inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D G5S_0091 edd1; Glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D G5S_0032 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D G5S_0276 putative TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D G5S_0598 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D G5S_1030 tRNA (Guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D G5S_0385 spoU rRNA methylase family protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D G5S_0538 spoU rRNA methylase family protein K03437 spoU; RNA methyltransferase, TrmH family D G5S_0693 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D G5S_0881 PP-loop type ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D G5S_0918 tgtB; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D G5S_0036 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D G5S_0967 o-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D G5S_0389 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D G5S_0568 conserved hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D G5S_0034 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cpm03012] D G5S_0818 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D G5S_0044 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D G5S_0350 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D G5S_1075 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D G5S_0515 fusA; translation elongation factor G K02355 fusA; elongation factor G D G5S_1035 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D G5S_0348 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D G5S_1034 protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D G5S_0086 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D G5S_1077 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D G5S_0138 efp; translation elongation factor P K02356 efp; elongation factor P D G5S_0953 Elongation factor P K02356 efp; elongation factor P D G5S_0482 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:cpm03110] D G5S_1004 clpB; ATP-dependent Clp protease, subunit B K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D G5S_0694 endopeptidase Clp ATP-binding chain clpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D G5S_0197 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D G5S_0569 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D G5S_0265 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_1017 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_0668 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D G5S_0571 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D G5S_1016 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES D G5S_0059 serine proteinase, HtrA/DegQ/DegS family K04771 degP; serine protease Do [EC:3.4.21.107] D G5S_0035 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D G5S_0386 trx; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cpm04131] D G5S_0429 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D G5S_0421 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D G5S_0179 pgm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D G5S_1050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:cpm03032] D G5S_0718 himA; Bacterial histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D G5S_0827 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D G5S_0707 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D G5S_0432 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D G5S_0094 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D G5S_0752 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein D G5S_0379 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D G5S_0795 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D G5S_0756 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D G5S_0724 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0390 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0866 DNA-directed DNA polymerase III chain K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0677 dnaH; DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_1028 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D G5S_0634 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D G5S_0993 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D G5S_0864 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D G5S_0327 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D G5S_0863 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D G5S_0328 DNA gyrase B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D G5S_0275 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cpm03036] D G5S_0680 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D G5S_0718 himA; Bacterial histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D G5S_0827 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D G5S_0707 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D G5S_0714 probable penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D G5S_0160 DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D G5S_0129 rodA; cell division protein FtsW K03588 ftsW; cell division protein FtsW D G5S_0716 N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D G5S_0192 rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins D G5S_0174 rod; rod shape protein K05837 rodA; rod shape determining protein RodA D G5S_0236 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D G5S_0363 parB; chromosome partioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D G5S_0431 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D G5S_0660 site-specific recombinase, phage integrase family K03733 xerC; integrase/recombinase XerC D G5S_0003 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:cpm03400] D G5S_0456 DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D G5S_0269 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D G5S_0567 methylpurine-DNA glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D G5S_0736 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D G5S_0205 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D G5S_0685 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D G5S_0311 DNA-(Apurinic or apyrimidinic site) lyase K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D G5S_0500 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D G5S_0993 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D G5S_1051 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D G5S_0241 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D G5S_0097 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D G5S_0271 ATP-dependent helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D G5S_1066 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D G5S_1065 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D G5S_0419 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D G5S_0142 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D G5S_0095 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D G5S_0228 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D G5S_0650 xseA; exonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D G5S_0649 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D G5S_0379 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D G5S_0795 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D G5S_0756 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D G5S_0724 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0390 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D G5S_0866 DNA-directed DNA polymerase III chain K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0677 dnaH; DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D G5S_0752 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein D G5S_0305 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D G5S_0307 exodeoxyribonuclease v, gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D G5S_1023 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D G5S_0288 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D G5S_0283 recA; recA protein K03553 recA; recombination protein RecA D G5S_0428 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D G5S_0748 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D G5S_0427 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D G5S_0107 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D G5S_0679 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D G5S_0793 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D G5S_0465 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D G5S_0838 recR; recombination protein RecR K06187 recR; recombination protein RecR D G5S_0864 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D G5S_0327 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D G5S_0863 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D G5S_0328 DNA gyrase B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D G5S_0275 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D G5S_0718 himA; Bacterial histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D G5S_0053 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D G5S_0052 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cpm03029] D G5S_0818 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D G5S_0044 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D G5S_0350 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D G5S_1075 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D G5S_0515 fusA; translation elongation factor G K02355 fusA; elongation factor G D G5S_0777 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D G5S_0989 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D G5S_0383 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D G5S_0489 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D G5S_0628 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D G5S_0629 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D G5S_0627 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D G5S_0752 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein D G5S_0836 omp1; omp85 analog K07277 SAM50; outer membrane protein insertion porin family D G5S_0569 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D G5S_0571 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D G5S_0265 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_1017 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_1016 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES D G5S_0668 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D G5S_0180 nifs-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0743 Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0825 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cpm02000] D G5S_0017 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D G5S_0910 ABC transport ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D G5S_1005 ABC transporter, periplasmic substrate-binding protein, putative K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D G5S_1007 ABC transporter, permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D G5S_1006 mkl; ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D G5S_0594 glnH; amino acid ABC transporter, periplasmic amino acid-binding protein K09996 artJ; arginine transport system substrate-binding protein D G5S_0965 glnP; amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein D G5S_0964 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D G5S_0860 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein D G5S_0859 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein D G5S_0858 dipeptide transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein D G5S_0445 glutamine binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D G5S_0968 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D G5S_0970 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D G5S_0974 peptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein D G5S_0976 peptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein D G5S_0978 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D G5S_0977 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D G5S_0972 peptide ABC transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D G5S_0973 peptide ABC transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D G5S_0451 oligopeptide ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D G5S_0452 oppB; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D G5S_0454 oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D G5S_0365 ABC ATPase dipeptide transport K02031 ddpD; peptide/nickel transport system ATP-binding protein D G5S_0524 lipo; solute binding protein K09815 znuA; zinc transport system substrate-binding protein D G5S_0523 zinc; ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D G5S_0786 ssaB; periplasmic substrate binding protein TroA K11707 troA; manganese/zinc/iron transport system substrate-binding protein D G5S_0788 ABC transporter, permease protein, putative K11708 troC; manganese/zinc/iron transport system permease protein D G5S_0789 ABC transporter, permease protein K11709 troD; manganese/zinc/iron transport system permease protein D G5S_0787 troB; ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D G5S_0037 YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D G5S_0038 YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D G5S_0319 abcT2; ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D G5S_0892 permease, putative domain protein K09808 lolC_E; lipoprotein-releasing system permease protein D G5S_0893 ABC transporter ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D G5S_0357 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D G5S_0380 sugar phosphate sensor protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D G5S_0674 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D G5S_0673 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D G5S_0686 PTS fructose-specific enzyme IIBC component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D G5S_0687 Pts IIA protein with HTH DNA-Binding domain protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D G5S_0853 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D G5S_0256 tolr; ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD D G5S_0255 tolQ; MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ D G5S_0563 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D G5S_0745 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D G5S_0353 major outer membrane protein K03162 ompA; major outer membrane protein D G5S_0188 Outer membrane protein B precursor K08719 K08719; outer membrane protein B D G5S_0836 omp1; omp85 analog K07277 SAM50; outer membrane protein insertion porin family D G5S_1112 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease D G5S_0855 amino acid antiporter K20265 gadC; glutamate:GABA antiporter D G5S_0065 tyrP; aromatic amino acid transport protein K03834 tyrP; tyrosine-specific transport protein D G5S_0015 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family D G5S_0312 conserved hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D G5S_0920 conserved hypothetical integral membrane protein subfamily K09125 yhhQ; queuosine precursor transporter D G5S_0021 membrane protein, putative K05595 marC; multiple antibiotic resistance protein D G5S_0129 rodA; cell division protein FtsW K03588 ftsW; cell division protein FtsW D G5S_0260 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D G5S_0259 tolB; TolB protein precursor K03641 tolB; TolB protein C 02044 Secretion system [BR:cpm02044] D G5S_0225 Bacterial type II and III secretion system protein K02453 gspD; general secretion pathway protein D D G5S_0224 Type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D G5S_0223 pilC; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D G5S_0340 type III secretion protein SctC K03219 yscC; type III secretion protein C D G5S_0211 type III secretion protein SctJ K03222 yscJ; type III secretion protein J D G5S_0213 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L D G5S_0335 type III secretion cytoplasmic ATPase SctN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D G5S_0214 type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R D G5S_0215 YopT tranlocation T K03228 yscT; type III secretion protein T D G5S_0813 type III secretion protein, hrpY/hrcU family K03229 yscU; type III secretion protein U D G5S_0812 type III secretion protein, HrcV family K03230 yscV; type III secretion protein V D G5S_0811 conserved hypothetical protein K04058 yscW; type III secretion protein W D G5S_0772 flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA D G5S_0182 flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D G5S_0183 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D G5S_0184 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D G5S_0338 flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D G5S_0201 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D G5S_0496 protein export proteins secd/secf K12257 secDF; SecD/SecF fusion protein D G5S_1073 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D G5S_0652 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D G5S_0416 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D G5S_1032 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D G5S_0063 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D G5S_0151 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D G5S_0825 60 kDa inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cpm02042] D G5S_0563 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D G5S_0745 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:cpm02022] D G5S_0472 sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D G5S_0469 rrp; acetate metabolism regulatory protein K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:cpm02035] D G5S_0183 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D G5S_0184 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D G5S_0772 flagellar secretion protein K02400 flhA; flagellar biosynthesis protein FlhA D G5S_0338 flagellar motor switch domain/YscQ family K02417 fliN; flagellar motor switch protein FliN D G5S_0182 flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D G5S_0775 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cpm04812] D G5S_0192 rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins D G5S_0236 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D G5S_0363 parB; chromosome partioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cpm04147] D G5S_0242 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D G5S_0421 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D G5S_0368 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D G5S_1050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D G5S_0263 tsa; antioxidant, AhpC/Tsa family K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D G5S_0265 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_1017 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D G5S_0569 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D G5S_0002 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D G5S_0926 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D G5S_1075 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D G5S_0583 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D G5S_0898 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D G5S_0019 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D G5S_0600 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D G5S_0298 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D G5S_0209 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D G5S_0902 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D G5S_0651 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D G5S_0179 pgm; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cpm02048] D G5S_0192 rod shape protein-sugar kinase K03569 mreB; rod shape-determining protein MreB and related proteins D G5S_0504 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D G5S_0180 nifs-related aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D G5S_0743 Aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cpm00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cpm03100] D G5S_0302 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D G5S_0908 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D G5S_0322 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D G5S_0264 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D G5S_0468 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D G5S_0717 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D G5S_1019 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D G5S_0878 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D G5S_0134 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D G5S_0088 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D G5S_0347 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D G5S_0194 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D G5S_0352 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D G5S_0158 tRNA-His K14226 tRNA-His; tRNA His D G5S_0909 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D G5S_0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0474 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0387 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0463 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0423 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D G5S_0346 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D G5S_0986 tRNA-Met K14230 tRNA-Met; tRNA Met D G5S_0987 tRNA-Met K14230 tRNA-Met; tRNA Met D G5S_1080 tRNA-Met K14230 tRNA-Met; tRNA Met D G5S_0519 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D G5S_0771 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D G5S_0294 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D G5S_0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D G5S_0525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D G5S_0641 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D G5S_0433 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D G5S_0883 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D G5S_0342 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D G5S_1076 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D G5S_1074 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D G5S_0884 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D G5S_0879 tRNA-Val K14237 tRNA-Val; tRNA Val D G5S_0050 tRNA-Val K14237 tRNA-Val; tRNA Val D G5S_0156 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D G5S_0154 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D G5S_0153 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D G5S_0105 thioredoxin disulfide isomerase K01829 dsbH; disulfide reductase [EC:1.8.-.-] D G5S_0392 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D G5S_0824 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D G5S_0797 Thiamine biosynthesis lipoprotein apbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D G5S_1046 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D G5S_0343 arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D G5S_0251 deoxyribonuclease, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D G5S_0653 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D G5S_0384 Peptidyl-prolyl cis-trans isomerase Mip precursor K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D G5S_0299 nqrA; NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D G5S_0703 nqrB; NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D G5S_0702 nqrC; NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D G5S_0701 nqrD; NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D G5S_0700 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D G5S_0152 nqrF; NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D G5S_0173 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D G5S_0181 NifU-like protein K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D G5S_0867 lysophospholipase esterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D G5S_0344 UvrB/uvrC motif domain protein K19411 mcsA; protein arginine kinase activator D G5S_0195 trigger factor K03545 tig; trigger factor D G5S_0796 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D G5S_0055 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D G5S_0800 Late transcription unit B protein K08275 ltuB; late transcription unit B protein D G5S_0676 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D G5S_0784 ADP,ATP carrier protein 1 K03301 TC.AAA; ATP:ADP antiporter, AAA family D G5S_0435 ADP, ATP carrier protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D G5S_0367 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D G5S_0586 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D G5S_0848 na-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D G5S_0541 gltP; glutamate symport K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D G5S_0165 sodium/alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D G5S_0531 D-Ala/Gly permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D G5S_0206 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D G5S_0981 sodium:sulfate symporter family protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D G5S_1041 phosphate starvation-inducible protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D G5S_0835 OmpH-like protein precursor K06142 hlpA; outer membrane protein C 99994 Others D G5S_0125 cutA; periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D G5S_0358 ABC transporter permease K09015 sufD; Fe-S cluster assembly protein SufD D G5S_0960 ribonuclease BN family protein K07058 K07058; membrane protein D G5S_0558 conserved hypothetical protein K07081 K07081; putative periplasmic solute-binding protein D G5S_0309 rhodanese-like domain protein K07146 K07146; UPF0176 protein C 99997 Function unknown D G5S_0642 conserved hypothetical protein K06888 K06888; uncharacterized protein D G5S_0984 dienelactone hydrolase family protein K06889 K06889; uncharacterized protein D G5S_0990 conserved hypothetical protein K06889 K06889; uncharacterized protein D G5S_0064 transport permease K06890 K06890; uncharacterized protein D G5S_0126 KH domain protein K06960 K06960; uncharacterized protein D G5S_0323 KH domain protein K06960 K06960; uncharacterized protein D G5S_0356 sufB; FeS assembly protein SufB K07033 K07033; uncharacterized protein D G5S_0882 protein translocase subunit K07039 K07039; uncharacterized protein D G5S_0480 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein D G5S_0443 phosphohydrolase K07099 K07099; uncharacterized protein D G5S_0163 set domain protein K07117 K07117; uncharacterized protein D G5S_0545 conserved hypothetical protein K07164 K07164; uncharacterized protein D G5S_0461 alpha-hemolysin K08998 K08998; uncharacterized protein D G5S_1010 conserved hypothetical protein K08999 K08999; uncharacterized protein D G5S_0576 conserved hypothetical protein K09131 K09131; uncharacterized protein D G5S_0626 conserved hypothetical protein K09779 K09779; uncharacterized protein D G5S_0366 conserved hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024