+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Cucumis sativus (cucumber)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 101213750 mediator of RNA polymerase II transcription subunit 36a K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 101206527 probable mediator of RNA polymerase II transcription subunit 36b K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 101216223 nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 101217731 probable nucleolar protein 5-2 K14565 NOP58; nucleolar protein 58 D 101222939 NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 101222784 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 101221716 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 101208691 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 101221807 H/ACA ribonucleoprotein complex subunit 3-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 101203341 H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 B 90S particles C U3 small nucleolar RNA-associated proteins D 101205153 U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 101219175 U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 101215267 U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 101204682 neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 101206925 ribosomal RNA-processing protein 7 homolog A isoform X1 K14545 RRP7; ribosomal RNA-processing protein 7 D 101218104 periodic tryptophan protein 2 K14558 PWP2; periodic tryptophan protein 2 D 101219176 nucleolar protein 14 isoform X1 K14766 NOP14; nucleolar protein 14 D 101211748 something about silencing protein 10 isoform X1 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 101222880 WD repeat-containing protein PCN K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 101221748 WD repeat-containing protein 43 isoform X2 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 101213788 WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 101220805 U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 101222870 probable U3 small nucleolar RNA-associated protein 7 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 101214572 uncharacterized protein At3g06530 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 101210317 probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 101219555 probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 101203980 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 101209097 transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 101207643 U3 small nucleolar RNA-associated protein 14 homolog A K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 101220388 protein SLOW WALKER 1 K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 101221320 WD repeat-containing protein 75 isoform X2 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 101208908 U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 101208846 nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 101208309 small subunit processome component 20 homolog isoform X1 K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 101216698 WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 101220196 nucleolar protein 6 isoform X1 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 101219567 nucleolar protein 6 isoform X1 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 101203154 rRNA-processing protein UTP23 homolog isoform X1 K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 101220343 rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 101210941 U3 small nucleolar RNA-associated protein 25 isoform X1 K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 101221153 ribosomal L1 domain-containing protein 1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 101213480 DEAD-box ATP-dependent RNA helicase 32 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 101209673 DEAD-box ATP-dependent RNA helicase 51 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101222933 DEAD-box ATP-dependent RNA helicase 51 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101214337 DEAD-box ATP-dependent RNA helicase 50 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101219259 DEAD-box ATP-dependent RNA helicase 10 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 101215196 DEAD-box ATP-dependent RNA helicase 36 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 101214706 DEAD-box ATP-dependent RNA helicase 57 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 101218276 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 101221435 ATP-dependent RNA helicase DEAH13 isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 101222664 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 101222795 ribosome biogenesis protein bms1 K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 101206525 apoptosis-enhancing nuclease isoform X2 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 101211187 RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 101207822 lariat debranching enzyme isoform X1 K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 101207500 casein kinase II subunit alpha-2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 101207095 casein kinase II subunit alpha-2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 101205903 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 101207720 putative casein kinase II subunit beta-4 K03115 CSNK2B; casein kinase II subunit beta D 101211694 casein kinase II subunit beta-1 K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 101203122 putative uncharacterized protein DDB_G0270496 K14782 AATF; protein AATF/BFR2 D 101206095 protein CMSS1 K14784 CMS1; protein CMS1 D 101219867 ribosomal RNA small subunit methyltransferase nep-1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 101206369 ribosomal RNA small subunit methyltransferase NEP1-like K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 101219009 pre-rRNA-processing protein ESF2 K14785 ESF2; ESF2/ABP1 family protein D 101205683 protein KRI1 homolog K14786 KRI1; protein KRI1 D 101211744 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 101206406 multiple RNA-binding domain-containing protein 1 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 101219434 RNA cytidine acetyltransferase 2 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 101217092 RNA cytidine acetyltransferase 1 isoform X1 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 101208150 RNA cytidine acetyltransferase 1 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 101206235 nucleolin 1 isoform X3 K11294 NCL; nucleolin D 101222544 nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2 D 101212635 pumilio homolog 23 K14790 NOP9; nucleolar protein 9 D 101213045 uncharacterized protein LOC101213045 isoform X1 K11135 PINX1; Pin2-interacting protein X1 D 101211367 uncharacterized WD repeat-containing protein C17D11.16 K14791 PWP1; periodic tryptophan protein 1 D 101203634 probable RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 101211680 rRNA biogenesis protein RRP5 K14792 RRP5; rRNA biogenesis protein RRP5 D 101223179 U3 snoRNP-associated protein-like YAO K14793 RRP9; ribosomal RNA-processing protein 9 D 101216060 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 101211431 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 101222639 ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 101207346 DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 101208620 serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 101211928 serine/threonine-protein kinase rio2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 101215363 ribosomal RNA small subunit methyltransferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 101203673 ribosomal RNA small subunit methyltransferase, mitochondrial K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 101217859 18S rRNA (guanine-N(7))-methyltransferase RID2 isoform X1 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 101210097 methyltransferase-like protein 5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 101207233 bystin K14797 ENP1; essential nuclear protein 1 D 101207600 protein LTV1 homolog K14798 LTV1; protein LTV1 D 101221544 RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1 D 101217376 RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1 D 101205989 RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1 D 105434483 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran D 101211465 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran D 105434419 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran D 101219711 GTP-binding nuclear protein Ran1A K07936 RAN; GTP-binding nuclear protein Ran D 101214103 adenylate kinase isoenzyme 6 homolog K18532 AK6; adenylate kinase [EC:2.7.4.3] D 101207904 pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 101210083 pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2 D 101221113 pre-rRNA-processing protein TSR2 isoform X2 K14800 TSR2; pre-rRNA-processing protein TSR2 D 101207685 ribosome biogenesis protein TSR3 homolog isoform X1 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 116403368 LOW QUALITY PROTEIN: ribosome biogenesis protein TSR3 homolog K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 101216735 programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 101213504 programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4 D 101217101 protein EXPORTIN 1A K14290 XPO1; exportin-1 D 101217759 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 101203580 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 101222100 transportin-1 K18752 TNPO1; transportin-1 D 101205689 importin-4 K20221 IPO4; importin-4 D 101218569 LOW QUALITY PROTEIN: importin-5 K20222 IPO5; importin-5 D 101221332 importin-5 K20222 IPO5; importin-5 D 101206810 importin beta-like SAD2 K20223 IPO7; importin-7 D 101216055 importin-9 isoform X1 K20224 IPO9; importin-9 C Other pre-40S particles D 101207069 phospholipid-transporting ATPase 3 isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 101212953 phospholipid-transporting ATPase 1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 101206692 phospholipid-transporting ATPase 1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 101212554 eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J D 101210349 PP2C1; probable protein phosphatase 2C 27 isoform X1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101216626 probable protein phosphatase 2C 49 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101207477 probable protein phosphatase 2C 13 isoform X1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101205355 probable protein phosphatase 2C 27 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101211141 probable protein phosphatase 2C 28 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101214910 LOW QUALITY PROTEIN: ABC transporter E family member 2 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D 116405626 LOW QUALITY PROTEIN: ABC transporter E family member 2-like K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 101203955 DEAD-box ATP-dependent RNA helicase 20 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101206160 DEAD-box ATP-dependent RNA helicase 20 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101215674 DEAD-box ATP-dependent RNA helicase 46 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101206347 DEAD-box ATP-dependent RNA helicase 46 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 116401623 DEAD-box ATP-dependent RNA helicase 46-like K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101209673 DEAD-box ATP-dependent RNA helicase 51 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101222933 DEAD-box ATP-dependent RNA helicase 51 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101214337 DEAD-box ATP-dependent RNA helicase 50 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101209696 DEAD-box ATP-dependent RNA helicase 7 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 101209958 DEAD-box ATP-dependent RNA helicase 13 isoform X1 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 101203996 DEAD-box ATP-dependent RNA helicase 28 isoform X1 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 101210430 DEAD-box ATP-dependent RNA helicase 17 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 101217879 DEAD-box ATP-dependent RNA helicase 1 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 101204781 putative DEAD-box ATP-dependent RNA helicase 29 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 101220537 DEAD-box ATP-dependent RNA helicase 18 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 101216490 DEAD-box ATP-dependent RNA helicase 16 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D 101220294 DEAD-box ATP-dependent RNA helicase 5 K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7] D 101205306 DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D 101203071 DExH-box ATP-dependent RNA helicase DExH9 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 101222973 guanine nucleotide-binding protein-like NSN1 K14538 NUG1; nuclear GTP-binding protein D 101210402 guanine nucleotide-binding protein-like NSN1 K14538 NUG1; nuclear GTP-binding protein D 101207909 nuclear/nucleolar GTPase 2 K14537 NUG2; nuclear GTP-binding protein D 101221227 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D 101204423 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D 101216227 GTPase LSG1-2-like K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 101217674 GTPase LSG1-2 K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 101220903 elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 101219566 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D 101213034 small RNA degrading nuclease 1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 101215617 small RNA degrading nuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 101206774 5'-3' exoribonuclease 3 isoform X2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E 101208103 ribonucleases P/MRP protein subunit POP1 isoform X1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 101212457 ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 101220274 probable ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 101218953 protein GAMETOPHYTE DEFECTIVE 1 isoform X1 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases D 101217238 polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 101219258 ABC transporter F family member 1 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 101217729 DNAJ protein JJJ1 homolog K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 101207707 eukaryotic translation initiation factor 6-2 K03264 EIF6; translation initiation factor 6 D 101212091 eukaryotic translation initiation factor 6-2 K03264 EIF6; translation initiation factor 6 D 101210094 stromal 70 kDa heat shock-related protein, chloroplastic K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101215599 heat shock cognate 70 kDa protein 2 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101210925 heat shock cognate 70 kDa protein 2-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101212307 stromal 70 kDa heat shock-related protein, chloroplastic K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101211905 heat shock cognate 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101215564 heat shock 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101222102 mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4 D 101217835 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D 105434483 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran D 101211465 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran D 105434419 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran D 101219711 GTP-binding nuclear protein Ran1A K07936 RAN; GTP-binding nuclear protein Ran D 101219700 cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 K14816 REI1; pre-60S factor REI1 D 101215380 ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 101217101 protein EXPORTIN 1A K14290 XPO1; exportin-1 D 101217759 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 101203580 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 101222100 transportin-1 K18752 TNPO1; transportin-1 D 101205689 importin-4 K20221 IPO4; importin-4 D 101218569 LOW QUALITY PROTEIN: importin-5 K20222 IPO5; importin-5 D 101221332 importin-5 K20222 IPO5; importin-5 D 101206810 importin beta-like SAD2 K20223 IPO7; importin-7 D 101216055 importin-9 isoform X1 K20224 IPO9; importin-9 D 101204244 probable inactive dual specificity protein phosphatase-like At4g18593 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] D 101221921 dual specificity protein phosphatase 12 isoform X1 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 101213652 uncharacterized protein LOC101213652 isoform X1 K14827 IPI1; pre-rRNA-processing protein IPI1 D 101212515 protein ROOT INITIATION DEFECTIVE 3 K14829 IPI3; pre-rRNA-processing protein IPI3 D 101204364 protein ROOT INITIATION DEFECTIVE 3 K14829 IPI3; pre-rRNA-processing protein IPI3 D 101211650 protein ROOT INITIATION DEFECTIVE 3 K14829 IPI3; pre-rRNA-processing protein IPI3 D 101206515 pre-rRNA-processing protein las1 K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D 101219451 E3 ubiquitin-protein ligase listerin isoform X1 K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 101216700 transcription factor 25 K24970 TCF25; transcription factor 25 D 101208866 nuclear export mediator factor Nemf K24971 NEMF; nuclear export mediator factor NEMF D 101220994 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase D 101205889 cell division cycle protein 48 homolog isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase D 101219394 cell division control protein 48 homolog E K13525 VCP; transitional endoplasmic reticulum ATPase D 101208166 NPL4-like protein 1 K14015 NPLOC4; nuclear protein localization protein 4 D 101204569 ubiquitin fusion degradation protein 1 homolog isoform X1 K14016 UFD1; ubiquitin fusion degradation protein 1 D 101214271 ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1 K14016 UFD1; ubiquitin fusion degradation protein 1 D 101206751 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] D 101216211 ankyrin repeat and zinc finger domain-containing protein 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 101210334 ribosome biogenesis protein BRX1 homolog 1 K14820 BRX1; ribosome biogenesis protein BRX1 D 116403918 ribosome biogenesis protein BRX1 homolog 2-like K14820 BRX1; ribosome biogenesis protein BRX1 D 116404988 ribosome biogenesis protein BRX1 homolog 1-like K14820 BRX1; ribosome biogenesis protein BRX1 D 116402004 ribosome biogenesis protein BRX1 homolog 1-like isoform X1 K14820 BRX1; ribosome biogenesis protein BRX1 D 101222807 zinc finger protein 593 K14821 BUD20; bud site selection protein 20 D 101216173 probable rRNA-processing protein EBP2 homolog K14823 EBP2; rRNA-processing protein EBP2 D 101220511 ribosome biogenesis protein BOP1 homolog K14824 ERB1; ribosome biogenesis protein ERB1 D 101208577 peptidyl-prolyl cis-trans isomerase FKBP53 K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D 101209576 peptidyl-prolyl cis-trans isomerase FKBP43 K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D 101204825 p21-activated protein kinase-interacting protein 1-like K14830 MAK11; protein MAK11 D 101215487 protein MAK16 homolog K14831 MAK16; protein MAK16 D 101213276 CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21 D 101210104 midasin K14572 MDN1; midasin D 101222851 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 101210259 nucleolar complex protein 2 homolog isoform X2 K14833 NOC2; nucleolar complex protein 2 D 101220861 nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2 D 101213821 nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 101211286 probable 28S rRNA (cytosine-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 101217384 RNA-binding protein 28 K14573 NOP4; nucleolar protein 4 D 101206555 uncharacterized LOC101206555 K14837 NOP12; nucleolar protein 12 D 101206517 uncharacterized RNA-binding protein C1827.05c K14838 NOP15; nucleolar protein 15 D 101209910 uncharacterized protein LOC101209910 K14839 NOP16; nucleolar protein 16 D 101219902 ribosome biogenesis protein NOP53 K14840 NOP53; nucleolar protein 53 D 101214043 LOW QUALITY PROTEIN: WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 101218145 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 101217027 pescadillo homolog K14843 PES1; pescadillo D 101210633 pumilio homolog 24 isoform X1 K14844 PUF6; pumilio homology domain family member 6 D 101211367 uncharacterized WD repeat-containing protein C17D11.16 K14791 PWP1; periodic tryptophan protein 1 D 101211450 decapping nuclease DXO homolog, chloroplastic K14845 RAI1; RAT1-interacting protein D 101216502 cell division control protein 48 homolog C K14571 RIX7; ribosome biogenesis ATPase D 101209843 ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 101208938 ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 101209751 glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1 D 101212182 ribosomal RNA processing protein 1 homolog K14849 RRP1; ribosomal RNA-processing protein 1 D 101221148 ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 101216060 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 101211431 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 101209969 ribosomal RNA-processing protein 17 isoform X1 K14851 RRP17; ribosomal RNA-processing protein 17 D 101216908 ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 101217619 notchless protein homolog K14855 RSA4; ribosome assembly protein 4 D 101218876 protein SDA1 homolog K14856 SDA1; protein SDA1 D 101209556 adoMet-dependent rRNA methyltransferase spb1 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 101206002 peter Pan-like protein K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 101215477 uncharacterized protein LOC101215477 isoform X1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 101217615 ribosome biogenesis protein WDR12 homolog K14863 WDR12; ribosome biogenesis protein D 101208978 zinc finger HIT domain-containing protein 3 isoform X5 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 101218410 protein BCCIP homolog K15262 BCP1; protein BCP1 C 101207334 UBP1-associated proteins 1C K15263 LYER; cell growth-regulating nucleolar protein C 101212715 probable 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 101220884 uncharacterized protein LOC101220884 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 101204144 GTPase ERA-like, chloroplastic K03595 era; GTPase C 101207216 GTP-binding protein ERG K03595 era; GTPase C 101206707 uncharacterized protein LOC101206707 isoform X2 K26142 NOPCHAP1; NOP protein chaperone 1 C 101208937 ERBB-3 BINDING PROTEIN 1 K26736 PA2G4; ERBB-3 binding protein C 101222327 DAR GTPase 2, mitochondrial K19828 MTG1; mitochondrial GTPase 1 C 101211288 short integuments 2, mitochondrial isoform X1 K19828 MTG1; mitochondrial GTPase 1 C 101222432 DAR GTPase 3, chloroplastic K19828 MTG1; mitochondrial GTPase 1 C 101215455 NO-associated protein 1, chloroplastic/mitochondrial K13427 NOA1; nitric-oxide synthase, plant [EC:1.14.13.39] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 101216223 nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 101218399 60S ribosomal protein L7a-2 isoform X1 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D 101213286 60S ribosomal protein L7a-1 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D 101213044 60S ribosomal protein L7a-1 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 101222784 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 101221807 H/ACA ribonucleoprotein complex subunit 3-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors D 101213733 uncharacterized protein LOC101213733 isoform X1 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D 101219448 uncharacterized protein LOC101219448 K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D 101221749 uncharacterized protein LOC101221749 K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D 101212996 uncharacterized protein LOC101212996 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D 101212823 uncharacterized protein LOC101212823 K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D 101220649 putative RNA methyltransferase At5g10620 isoform X2 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D 101210124 uncharacterized protein LOC101210124 K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D 101221561 uncharacterized protein LOC101221561 K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D 101212823 uncharacterized protein LOC101212823 K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D 101213921 RNA pseudouridine synthase 2, chloroplastic K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors B rRNA processing factors C 101205919 uncharacterized protein LOC101205919 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases B GTPases C 101204144 GTPase ERA-like, chloroplastic K03595 era; GTPase C 101207216 GTP-binding protein ERG K03595 era; GTPase C 101206221 small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C 101219907 uncharacterized protein LOC101219907 isoform X2 K03665 hflX; GTPase B Other maturation factors C 101218637 yrdC domain-containing protein, mitochondrial isoform X1 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C 101215399 probable ribosome-binding factor A, chloroplastic K02834 rbfA; ribosome-binding factor A C 101213060 uncharacterized protein LOC101213060 K07574 yhbY; RNA-binding protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions D 116402988 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 116402985 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 116402289 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 116402288 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 116402287 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 116402286 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 116404818 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 116404817 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 116403013 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18 D 116403012 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18 D 116401847 small nucleolar RNA SNORD24 K14867 SNORD24; small nucleolar RNA SNORD24 D 116401850 small nucleolar RNA Z195/SNORD33/SNORD32 family K14881 SNORD32_33; small nucleolar RNA SNORD32/33 D 116404198 small nucleolar RNA SNORD34 K14888 SNORD34; small nucleolar RNA SNORD34 D 116402305 small nucleolar RNA SNORD34 K14888 SNORD34; small nucleolar RNA SNORD34 D 116402294 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36 D 116405329 small nucleolar RNA Z159/U59 K14880 SNORD59; small nucleolar RNA SNORD59 D 116403019 small nucleolar RNA R64/Z200 family K14904 SNORD104; small nucleolar RNA SNORD104 C SnoRNAs act as guides for 2'-O-ribose methylation D 116402307 small nucleolar RNA R38 K14869 SNORD1; small nucleolar RNA SNORD1 D 116402306 small nucleolar RNA R38 K14869 SNORD1; small nucleolar RNA SNORD1 D 116404833 small nucleolar RNA SNORD96 family K14870 SNORD2; small nucleolar RNA SNORD2 D 116404196 small nucleolar RNA SNORD96 family K14870 SNORD2; small nucleolar RNA SNORD2 D 116405327 small nucleolar RNA SNORD25 K14882 SNORD25; small nucleolar RNA SNORD25 D 116401846 small nucleolar RNA SNORD25 K14882 SNORD25; small nucleolar RNA SNORD25 D 116402271 small nucleolar RNA U30 K26298 SNORD30; small nucleolar RNA SNORD30 D 116401868 small nucleolar RNA U31b K14893 SNORD31; small nucleolar RNA SNORD31 D 116401851 small nucleolar RNA Z196/R39/R59 family K14885 SNORD51; small nucleolar RNA SNORD51 D 116403033 small nucleolar RNA U61 K26311 SNORD61; small nucleolar RNA SNORD61 D 116404845 small nucleolar RNA snoR77Y K14903 SNORD65; small nucleolar RNA SNORD65 D 116401856 small nucleolar RNA R44/J54/Z268 family K14890 SNORD74; small nucleolar RNA SNORD74 D 116404841 small nucleolar RNA R44/J54/Z268 family K14890 SNORD74; small nucleolar RNA SNORD74 D 116401853 small nucleolar RNA snR60/Z15/Z230/Z193/J17 K14886 SNORD77_80; small nucleolar RNA SNORD77/80 D 116401860 small nucleolar RNA U83 K27134 SNORD83; small nucleolar RNA SNORD83 D 116404195 small nucleolar RNA R30/Z108 K27121 SNORD100; small nucleolar RNA SNORD100 D 116404206 small nucleolar RNA snoR60 K27122 SNORD101; small nucleolar RNA SNORD101 D 116403025 small nucleolar RNA snoR60 K27122 SNORD101; small nucleolar RNA SNORD101 D 116403024 small nucleolar RNA snoR60 K27122 SNORD101; small nucleolar RNA SNORD101 D 116402972 small nucleolar RNA snoR14 K27129 SNORD110; small nucleolar RNA SNORD110 D 116403014 small nucleolar RNA Z105 K14876 SNR50; small nucleolar RNA SNR50 D 116404203 small nucleolar RNA R160 K14891 SNR65; small nucleolar RNA SNR65 D 116402274 small nucleolar RNA snoR137 K14894 SNR68; small nucleolar RNA SNR68 D 116404812 small nucleolar RNA snoR137 K14894 SNR68; small nucleolar RNA SNR68 D 116401861 small nucleolar RNA snoR69Y K26476 SNR69; small nucleolar RNA SNR69 D 116401862 small nucleolar RNA snoR69Y K26476 SNR69; small nucleolar RNA SNR69 D 116402321 small nucleolar RNA snoR69Y K26476 SNR69; small nucleolar RNA SNR69 D 116402320 small nucleolar RNA snoR69Y K26476 SNR69; small nucleolar RNA SNR69 D 116403581 small nucleolar RNA Z122 K14898 SNR72; small nucleolar RNA SNR72 D 116403582 small nucleolar RNA Z122 K14898 SNR72; small nucleolar RNA SNR72 D 116403583 small nucleolar RNA Z122 K14898 SNR72; small nucleolar RNA SNR72 D 116402992 small nucleolar RNA SNOR75 K14901 SNR75; small nucleolar RNA SNR75 D 116402993 small nucleolar RNA SNOR75 K14901 SNR75; small nucleolar RNA SNR75 D 116402982 small nucleolar RNA snoR118 K14902 SNR76; small nucleolar RNA SNR76 B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation D 116404207 small nucleolar RNA snoR31/Z110/Z27 K14918 SNORA1; small nucleolar RNA SNORA1 D 116403589 small nucleolar RNA snoR138 K14922 SNORA2_34; small nucleolar RNA SNORA2/34 B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024