+D GENES KO #

  KEGG Orthology (KO) - Clostridium tetani E88

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ctc00010] D CTC_00230 transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2] D CTC_02404 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTC_02490 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTC_01007 glpX; glpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTC_00604 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CTC_00507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTC_00341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTC_00380 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTC_00378 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTC_00379 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTC_00381 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CTC_00382 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTC_02489 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTC_02014 pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_02526 porA; pyruvate synthase subunit porA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CTC_02525 porB; pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CTC_02528 porC; pyruvate synthase subunit porC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D CTC_02527 porD; pyruvate synthase subunit porD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CTC_01159 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CTC_01741 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CTC_01998 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTC_01366 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CTC_00779 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTC_00454 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CTC_00278 PTS system, glucose-specific IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:ctc00020] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_02562 fumarate hydratase subunit A K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CTC_02561 fumarate hydratase subunit B K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CTC_02224 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CTC_02526 porA; pyruvate synthase subunit porA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CTC_02525 porB; pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CTC_02528 porC; pyruvate synthase subunit porC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D CTC_02527 porD; pyruvate synthase subunit porD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CTC_01159 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CTC_01741 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:ctc00030] D CTC_02404 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTC_01864 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTC_01865 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CTC_01227 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CTC_01332 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CTC_00228 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CTC_00307 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CTC_01994 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CTC_02352 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CTC_00909 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CTC_01389 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CTC_00779 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTC_00454 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CTC_00188 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CTC_00507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTC_00341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTC_01007 glpX; glpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTC_00604 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CTC_02490 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:ctc00040] D CTC_02269 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTC_01227 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CTC_00944 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:ctc00051] D CTC_00339 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CTC_00454 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CTC_00265 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CTC_00944 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D CTC_02490 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTC_01007 glpX; glpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTC_00604 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CTC_00507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTC_00341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTC_00380 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTC_00307 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:ctc00052] D CTC_00865 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CTC_00864 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CTC_00866 galE; UDP-glucose 4-epimerase, galE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTC_01708 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTC_02269 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTC_00779 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTC_00454 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CTC_00230 transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2] D CTC_02490 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:ctc00500] D CTC_02269 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTC_00779 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTC_00454 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CTC_00230 transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2] D CTC_02404 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ctc00520] D CTC_02158 putative anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CTC_02631 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CTC_02543 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTC_02544 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CTC_00187 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CTC_00169 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTC_00314 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTC_02496 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTC_00311 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CTC_02265 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D CTC_02264 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D CTC_01638 pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D CTC_01712 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D CTC_00278 PTS system, glucose-specific IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CTC_00230 transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2] D CTC_00779 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTC_00454 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CTC_02269 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTC_00865 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CTC_00864 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CTC_00866 galE; UDP-glucose 4-epimerase, galE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTC_01708 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTC_02404 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTC_00339 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CTC_00265 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CTC_01707 putative perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:ctc00620] D CTC_02526 porA; pyruvate synthase subunit porA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CTC_02525 porB; pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CTC_02528 porC; pyruvate synthase subunit porC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D CTC_02527 porD; pyruvate synthase subunit porD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CTC_01159 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CTC_01741 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_01441 alcohol dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D CTC_02172 eutE; ethanolamine utilization protein eutE K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D CTC_01366 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CTC_01240 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CTC_01239 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTC_02489 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTC_00132 biotin carboxyl carrier protein of acetyl-coA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTC_00134 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CTC_00478 acetyl-coA:acetoacetyl-coA transferase alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CTC_00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CTC_00976 (S)-2-hydroxy-acid oxidase chain D K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436] D CTC_00974 electron transfer flavoprotein alpha-subunit K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC D CTC_00973 electron transfer flavoprotein beta-subunit K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB D CTC_01998 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTC_02196 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CTC_00356 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CTC_02463 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CTC_02224 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CTC_02562 fumarate hydratase subunit A K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CTC_02561 fumarate hydratase subunit B K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CTC_02014 pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ctc00630] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTC_00706 maoC; (de)hydratase mit maoC domain K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D CTC_02565 mutE; glutamate mutase, mutE K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D CTC_02568 mutS; glutamate mutase, mutS K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D CTC_02563 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D CTC_00171 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_00702 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTC_01863 polyketide cyclase K07130 kynB; arylformamidase [EC:3.5.1.9] C 00640 Propanoate metabolism [PATH:ctc00640] D CTC_00478 acetyl-coA:acetoacetyl-coA transferase alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CTC_00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CTC_01240 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CTC_01239 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_02526 porA; pyruvate synthase subunit porA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CTC_02525 porB; pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CTC_02528 porC; pyruvate synthase subunit porC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D CTC_02527 porD; pyruvate synthase subunit porD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CTC_01387 acyl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00710 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02426 butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00477 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02081 (3-hydroxy)butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00132 biotin carboxyl carrier protein of acetyl-coA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTC_00134 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTC_01998 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTC_00596 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:ctc00650] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTC_02423 3-hydroxybutyryl-coA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CTC_02427 putative crotonase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CTC_00479 3-hydroxybutyryl-coA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CTC_01387 acyl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00710 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02426 butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00477 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02081 (3-hydroxy)butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02545 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D CTC_02546 phosphotransbutyrylase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D CTC_01441 alcohol dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D CTC_02172 eutE; ethanolamine utilization protein eutE K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D CTC_01366 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CTC_00408 NADH-dependent butanol dehydrogenase A K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-] D CTC_00706 maoC; (de)hydratase mit maoC domain K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D CTC_00482 4-hydroxybutyrate coenzyme A transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-] D CTC_02526 porA; pyruvate synthase subunit porA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CTC_02525 porB; pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CTC_02528 porC; pyruvate synthase subunit porC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D CTC_02527 porD; pyruvate synthase subunit porD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CTC_01159 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CTC_01741 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00660 C5-Branched dibasic acid metabolism [PATH:ctc00660] D CTC_02563 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D CTC_02565 mutE; glutamate mutase, mutE K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D CTC_02568 mutS; glutamate mutase, mutS K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] C 00562 Inositol phosphate metabolism [PATH:ctc00562] D CTC_00990 conserved protein, phospholipase C related K01114 plc; phospholipase C [EC:3.1.4.3] D CTC_00511 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CTC_00513 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CTC_00512 iolE; myo-inositol catabolism protein iolE K03335 iolE; inosose dehydratase [EC:4.2.1.44] D CTC_00510 iolD; myo-inositol catabolism protein iolD K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D CTC_00509 iolB; myo-inositol catabolism protein iolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D CTC_00508 iolC; myo-inositol catabolism protein iolC K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D CTC_00380 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ctc00190] D CTC_00999 V-type sodium ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CTC_02328 V-type sodium ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CTC_01000 V-type sodium ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CTC_02327 V-type sodium ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CTC_00997 V-type sodium ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D CTC_02332 V-type sodium ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D CTC_01001 V-type sodium ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CTC_02326 V-type sodium ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CTC_00996 V-type sodium ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CTC_02329 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CTC_00998 V-type sodium ATP synthase subunit G K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D CTC_00993 V-type sodium ATP synthase subunit G K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D CTC_00994 V-type sodium ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CTC_02331 V-type sodium ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CTC_02330 putative ATPase related protein K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CTC_00995 V-type sodium ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CTC_01649 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ctc00680] D CTC_01156 carbon monoxide dehydrogenase beta subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D CTC_00382 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTC_00507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTC_00341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CTC_01007 glpX; glpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CTC_00604 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CTC_02490 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTC_01240 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CTC_01239 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTC_02526 porA; pyruvate synthase subunit porA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CTC_02525 porB; pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CTC_02528 porC; pyruvate synthase subunit porC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D CTC_02527 porD; pyruvate synthase subunit porD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CTC_00381 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CTC_00694 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CTC_00180 conserved protein K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:ctc00910] D CTC_00410 prismane protein-like protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D CTC_00125 conserved protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CTC_01295 NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D CTC_00171 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTC_02420 glutamate synthase (NADPH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CTC_02524 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:ctc00920] D CTC_01393 taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D CTC_01392 tauC; taurine transport system permease protein tauC K15552 tauC; taurine transport system permease protein D CTC_01394 tauB; putative taurine transport ATP-binding protein tauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CTC_01277 mgpA; mgpA protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D CTC_02486 anaerobic sulfite reductase subunit A K16950 asrA; anaerobic sulfite reductase subunit A D CTC_02485 anaerobic sulfite reductase subunit B K16951 asrB; anaerobic sulfite reductase subunit B D CTC_02484 anaerobic sulfite reductase subunit C K00385 asrC; anaerobic sulfite reductase subunit C D CTC_00351 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CTC_01343 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CTC_01152 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ctc00061] D CTC_00132 biotin carboxyl carrier protein of acetyl-coA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTC_00134 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTC_00129 malonyl coA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTC_00127 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CTC_00859 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CTC_00131 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTC_00798 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTC_00130 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTC_00133 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTC_00128 enoyl-[acyl-carrier protein] reductase (NADH) K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ctc00071] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTC_01387 acyl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00710 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02426 butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00477 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02081 (3-hydroxy)butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_01366 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ctc00561] D CTC_00702 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CTC_01762 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D CTC_01761 dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D CTC_01760 hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CTC_00596 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CTC_01758 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CTC_02462 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CTC_01242 plsX; fatty acid/phospholipid synthesis protein plsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CTC_00354 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTC_00551 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTC_02020 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CTC_00947 lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D CTC_00289 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D CTC_00539 phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D CTC_01028 alkaline phosphatase superfamily enzyme K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D CTC_01943 alkaline phosphatase superfamily enzyme K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00564 Glycerophospholipid metabolism [PATH:ctc00564] D CTC_01139 glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CTC_01808 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CTC_02436 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CTC_00354 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTC_00551 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTC_02020 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CTC_00990 conserved protein, phospholipase C related K01114 plc; phospholipase C [EC:3.1.4.3] D CTC_00427 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CTC_02177 eutA; ethanolamine utilization protein eutA K04019 eutA; ethanolamine utilization protein EutA D CTC_02176 ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D CTC_02175 ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D CTC_01266 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CTC_00346 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CTC_01356 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CTC_00080 putative phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CTC_01288 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CTC_00061 putative cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CTC_00117 phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D CTC_00990 conserved protein, phospholipase C related K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D CTC_00881 putative arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ctc00230] D CTC_01035 mutT; phosphohydrolase (mutT family protein) K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CTC_01389 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CTC_00779 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTC_00454 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CTC_00188 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CTC_01965 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CTC_01961 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CTC_01963 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CTC_01029 phosphoribosylformylglycinamidine synthase II K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CTC_01964 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CTC_01966 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CTC_01170 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CTC_01962 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CTC_02200 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CTC_01995 2',3'-cyclic-nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CTC_00147 stationary-phase survival protein sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CTC_01531 purine nucleoside phosphorylase I K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D CTC_01388 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CTC_00203 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CTC_02240 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CTC_02410 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CTC_02388 nucleoside-triphosphatase / Ham1P-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CTC_02386 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D CTC_02409 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CTC_01216 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CTC_00574 ribonucleoside-diphosphate reductase (vitamin B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTC_00257 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CTC_02012 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D CTC_02199 putative GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CTC_00336 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D CTC_00338 adenylate cyclase 2 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D CTC_01991 CLV1 receptor kinase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CTC_02583 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CTC_02524 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:ctc00240] D CTC_01706 putative carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CTC_02384 aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CTC_02383 aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CTC_02382 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CTC_00927 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CTC_02379 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D CTC_00930 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D CTC_02380 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D CTC_00929 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D CTC_02378 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CTC_02381 orotidine 5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CTC_01263 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CTC_02076 septum formation protein maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CTC_01315 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CTC_00344 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CTC_01064 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CTC_01995 2',3'-cyclic-nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CTC_00147 stationary-phase survival protein sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CTC_00308 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CTC_01613 pyrR; uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CTC_01991 CLV1 receptor kinase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CTC_00577 inosine-uridine preferring nucleoside hydrolase K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-] D CTC_01993 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D CTC_02019 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CTC_01883 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CTC_00257 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CTC_00574 ribonucleoside-diphosphate reductase (vitamin B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTC_00309 come operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CTC_00220 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CTC_01210 deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CTC_00298 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D CTC_02620 conserved protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CTC_00815 putative NADPH-dependent glutamate synthase beta chain K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CTC_00816 oxidoreductase iron-sulfur protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CTC_01781 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CTC_00926 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CTC_01898 putative N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ctc00250] D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_00823 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CTC_01877 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CTC_00781 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D CTC_00892 alanine dehydrogenase-like protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CTC_00824 aspartate ammonia-lyase, aspartase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CTC_00561 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CTC_00562 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CTC_02384 aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CTC_02383 aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CTC_02420 glutamate synthase (NADPH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CTC_01295 NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D CTC_00171 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTC_01706 putative carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CTC_00566 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CTC_02543 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTC_01965 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ctc00260] D CTC_02356 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTC_01282 aspartokinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTC_02293 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTC_02355 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTC_00886 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTC_02357 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CTC_00570 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CTC_02358 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CTC_01037 L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D CTC_00702 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CTC_00381 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CTC_00694 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_00346 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CTC_01356 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CTC_01981 L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CTC_01982 L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CTC_02624 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CTC_01827 putative L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] C 00270 Cysteine and methionine metabolism [PATH:ctc00270] D CTC_00351 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CTC_01343 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CTC_00825 putative aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CTC_01806 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CTC_00321 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CTC_01312 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CTC_02249 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CTC_01619 5-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CTC_00946 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D CTC_02226 atrazine chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CTC_00945 putative translation initiation factor EIF-2B subunit 1 K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D CTC_02530 Cys/Met metabolism lyase (PLP-dependent) K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D CTC_02356 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTC_01282 aspartokinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTC_02293 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTC_02355 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTC_00886 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTC_01152 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D CTC_01153 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CTC_01738 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01998 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTC_01981 L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CTC_01982 L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CTC_00694 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:ctc00280] D CTC_01738 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_01387 acyl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00710 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02426 butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00477 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02081 (3-hydroxy)butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ctc00290] D CTC_02624 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CTC_01738 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:ctc00300] D CTC_02355 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTC_00886 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CTC_02356 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTC_01282 aspartokinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTC_02293 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTC_02294 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTC_02295 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CTC_01945 XAA-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CTC_02456 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CTC_02532 meso-diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D CTC_01632 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTC_01631 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ctc00310] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTC_00890 L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D CTC_00606 conserved protein K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14] D CTC_02085 hypothetical protein K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14] D CTC_02086 hypothetical protein K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:ctc00220] D CTC_00561 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CTC_00562 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CTC_01763 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D CTC_00566 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CTC_00171 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTC_01295 NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D CTC_02524 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:ctc00330] D CTC_01884 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D CTC_01883 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CTC_02271 arginine/lysine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D CTC_02249 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CTC_01312 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CTC_01763 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D CTC_02431 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CTC_01044 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CTC_01042 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:ctc00340] D CTC_00432 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CTC_01046 histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D CTC_02318 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D CTC_02321 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D CTC_02320 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D CTC_01812 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D CTC_02305 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D CTC_01847 fumarate reductase flavoprotein subunit K17363 urdA; urocanate reductase [EC:1.3.99.33] D CTC_01478 putative histidine decarboxylase K01590 hdc; histidine decarboxylase [EC:4.1.1.22] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:ctc00350] D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01366 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CTC_00818 tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] C 00360 Phenylalanine metabolism [PATH:ctc00360] D CTC_02423 3-hydroxybutyryl-coA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:ctc00380] D CTC_01863 polyketide cyclase K07130 kynB; arylformamidase [EC:3.5.1.9] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTC_01509 tryptophanase 2 (L-tryptophan indole-lyase) K01667 tnaA; tryptophanase [EC:4.1.99.1] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ctc00400] D CTC_01618 putative phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CTC_01620 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CTC_01593 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CTC_01594 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CTC_01617 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CTC_02104 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CTC_01316 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D CTC_00116 chorismate mutase K06209 pheB; chorismate mutase [EC:5.4.99.5] D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ctc00410] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CTC_00815 putative NADPH-dependent glutamate synthase beta chain K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CTC_00816 oxidoreductase iron-sulfur protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CTC_01781 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CTC_00926 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CTC_01898 putative N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CTC_01387 acyl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00710 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02426 butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_00477 acyl-coA/butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CTC_02081 (3-hydroxy)butyryl-coA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:ctc00430] D CTC_00892 alanine dehydrogenase-like protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CTC_01295 NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D CTC_01239 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CTC_01240 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:ctc00440] D CTC_01698 putative phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104] D CTC_01699 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] D CTC_01700 (2-aminoethyl)phosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00450 Selenocompound metabolism [PATH:ctc00450] D CTC_00825 putative aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CTC_01806 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CTC_02530 Cys/Met metabolism lyase (PLP-dependent) K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D CTC_00842 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CTC_02552 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CTC_00243 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ctc00460] D CTC_01877 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CTC_00781 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] C 00470 D-Amino acid metabolism [PATH:ctc00470] D CTC_02513 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CTC_00291 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTC_00683 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTC_00566 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CTC_00259 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CTC_00409 putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CTC_00213 UDP-N-acetylmuramoylalanine-d-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTC_00823 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CTC_02456 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CTC_02312 conserved protein K01780 cntK; histidine racemase [EC:5.1.1.24] C 00480 Glutathione metabolism [PATH:ctc00480] D CTC_01866 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CTC_02317 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CTC_01865 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CTC_01864 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTC_02249 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation D CTC_00234 putative cell wall hydrolase K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96] C 00540 Lipopolysaccharide biosynthesis D CTC_00908 kpsF; polysialic acid capsule expression protein kpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 00542 O-Antigen repeat unit biosynthesis [PATH:ctc00542] D CTC_00310 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ctc00541] D CTC_02269 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CTC_00866 galE; UDP-glucose 4-epimerase, galE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTC_01708 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CTC_00339 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CTC_00265 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CTC_01707 putative perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102] D CTC_00187 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CTC_00311 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CTC_01712 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D CTC_02265 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D CTC_02264 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D CTC_01638 pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00550 Peptidoglycan biosynthesis [PATH:ctc00550] D CTC_00169 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTC_00314 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTC_02496 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTC_00185 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CTC_00213 UDP-N-acetylmuramoylalanine-d-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTC_01632 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTC_00291 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTC_00683 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTC_01631 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CTC_01265 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTC_01360 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTC_00545 bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTC_01630 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTC_01743 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CTC_02242 multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CTC_02071 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CTC_01633 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D CTC_02500 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D CTC_01530 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_01525 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_02051 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_00981 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_00541 UDP-N-acetylmuramyl tripeptide synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D CTC_00540 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:ctc00552] D CTC_00545 bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTC_00310 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CTC_02252 teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D CTC_02053 lytR; membrane-bound protein lytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D CTC_00289 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D CTC_00539 phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D CTC_01028 alkaline phosphatase superfamily enzyme K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D CTC_01943 alkaline phosphatase superfamily enzyme K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ctc00543] D CTC_00310 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CTC_00592 alginate O-acetylation protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D CTC_00351 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ctc00730] D CTC_00828 thiC; thiamine biosynthesis protein thiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CTC_01753 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CTC_01750 moeB; molybdopterin biosynthesis protein moeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D CTC_01459 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_01050 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_01326 thiH; thiH protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D CTC_01748 thiH; thiH protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D CTC_01575 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CTC_01749 thiG; thiG protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D CTC_01752 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CTC_01746 tenI; regulatory protein tenI K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CTC_01751 thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CTC_01226 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CTC_00659 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CTC_01228 thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D CTC_02583 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ctc00740] D CTC_00673 ribA; riboflavin biosynthesis protein ribA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CTC_00671 riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CTC_00674 riboflavin synthase beta subunit K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CTC_00672 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CTC_01279 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CTC_01752 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CTC_01035 mutT; phosphohydrolase (mutT family protein) K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:ctc00750] D CTC_00497 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CTC_00570 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CTC_02358 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:ctc00760] D CTC_00983 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CTC_01531 purine nucleoside phosphorylase I K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D CTC_01388 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CTC_01995 2',3'-cyclic-nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CTC_00147 stationary-phase survival protein sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CTC_02055 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CTC_00069 predicted NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CTC_00679 NH3-dependent NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CTC_00699 pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CTC_00216 regulatory protein, sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CTC_01573 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:ctc00770] D CTC_00207 putative transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D CTC_01217 phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CTC_01234 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CTC_02101 dephospho-coA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CTC_02516 holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CTC_01738 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTC_00815 putative NADPH-dependent glutamate synthase beta chain K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CTC_00816 oxidoreductase iron-sulfur protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CTC_01781 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CTC_00926 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CTC_01898 putative N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:ctc00780] D CTC_00131 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTC_00798 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTC_00130 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTC_00133 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTC_01860 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CTC_01327 biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6] D CTC_00151 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CTC_00852 birA; putative transcriptional repressor of the biotin operon birA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ctc00785] D CTC_02045 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00790 Folate biosynthesis [PATH:ctc00790] D CTC_00659 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CTC_02301 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CTC_00673 ribA; riboflavin biosynthesis protein ribA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CTC_02162 metal dependent hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D CTC_02472 molybdopterin-guanine dinucleotide biosynthesis protein A K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] C 00670 One carbon pool by folate [PATH:ctc00670] D CTC_02304 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CTC_01579 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CTC_02303 formiminotetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D CTC_01963 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CTC_01962 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CTC_02305 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D CTC_01220 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CTC_01806 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CTC_02620 conserved protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CTC_01011 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ctc00860] D CTC_00977 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTC_00725 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CTC_00730 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CTC_00729 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CTC_00727 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CTC_02538 putative oxygen-independent coproporphyrogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CTC_00728 uroporphyrinogen III synthase/methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CTC_00726 putative precorrin-2 dehydrogenase/oxidase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D CTC_00846 metallo cofactor biosynthesis protein K22226 ahbC; Fe-coproporphyrin III synthase D CTC_00743 cbiK; anaerobic cobalt chelatase cbiK K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CTC_00735 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D CTC_00739 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D CTC_00736 precorrin-3 methylase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D CTC_00737 cbiG; cobalamin biosynthesis protein cbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D CTC_00740 precorrin-6X reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D CTC_00733 cbiD; cobalamin biosynthetic protein cbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D CTC_00734 cbiT; precorrin-6B methylase/decarboxylase cbiT/cbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D CTC_00732 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D CTC_00731 cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D CTC_00746 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CTC_00744 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CTC_00720 cbiP; cobyric acid synthase cbiP K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D CTC_00721 cbiB; cobalamin biosynthesis protein cbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CTC_00718 cobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D CTC_00719 cobS; cobalamin (5-phosphate) synthase cobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D CTC_02290 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CTC_00717 alpha-ribazole-5-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D CTC_00786 conserved protein, kinase domain K16651 pduX; L-threonine kinase [EC:2.7.1.177] D CTC_00722 cobD; aminotransferase cobD K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D CTC_02171 ethanolamine utilization protein K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154] D CTC_02478 heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ctc00900] D CTC_01575 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CTC_01268 1-deoxy-d-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CTC_02626 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CTC_00283 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CTC_00232 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CTC_01270 gcpE; gcpE protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CTC_01314 conserved protein K02945 RP-S1; small subunit ribosomal protein S1 D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTC_01577 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTC_01265 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTC_01360 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CTC_01332 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:ctc01054] D CTC_00823 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:ctc00332] D CTC_01044 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CTC_01042 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ctc00261] D CTC_02356 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTC_01282 aspartokinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTC_02293 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTC_02294 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTC_02295 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ctc00521] D CTC_00230 transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2] D CTC_00779 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CTC_00454 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CTC_00511 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CTC_00513 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CTC_00230 transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CTC_00129 malonyl coA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTC_00798 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTC_00130 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:ctc00998] D CTC_01698 putative phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104] D CTC_01699 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00999 Biosynthesis of various plant secondary metabolites D CTC_00321 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ctc00362] D CTC_02423 3-hydroxybutyryl-coA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:ctc00625] D CTC_01366 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CTC_02523 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CTC_01925 2-haloalkanoic acid dehalogenase I K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D CTC_01925 2-haloalkanoic acid dehalogenase I K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:ctc00633] D CTC_01156 carbon monoxide dehydrogenase beta subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D CTC_02526 porA; pyruvate synthase subunit porA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CTC_02525 porB; pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CTC_02528 porC; pyruvate synthase subunit porC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D CTC_02527 porD; pyruvate synthase subunit porD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation D CTC_00478 acetyl-coA:acetoacetyl-coA transferase alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CTC_00708 acetyl-coA:acetoacetyl-coA transferase alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:ctc00626] D CTC_01366 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ctc03020] D CTC_02609 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTC_02608 DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTC_02578 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ctc03010] D CTC_01519 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D CTC_01314 conserved protein K02945 RP-S1; small subunit ribosomal protein S1 D CTC_01261 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D CTC_02596 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CTC_02579 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D CTC_02605 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D CTC_02589 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D CTC_02571 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D CTC_02580 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D CTC_02606 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D CTC_02581 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D CTC_02611 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D CTC_02598 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CTC_02600 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D CTC_02599 LSU ribosomal protein L1E(= L4P) K02926 RP-L4; large subunit ribosomal protein L4 D CTC_02590 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D CTC_02588 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D CTC_00112 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D CTC_02610 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D CTC_02612 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CTC_02572 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D CTC_02593 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CTC_02585 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CTC_02595 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D CTC_02577 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D CTC_02587 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CTC_01252 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D CTC_02283 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D CTC_02060 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D CTC_02597 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D CTC_02591 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CTC_00878 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D CTC_02058 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D CTC_0r03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r15 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r18 5S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r13 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r16 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ctc00970] D CTC_0t08 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTC_0t27 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTC_0t52 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTC_0t45 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTC_0t04 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTC_0t37 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTC_0t05 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTC_0t19 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTC_0t29 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTC_0t50 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTC_0t12 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CTC_0t21 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CTC_0t34 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CTC_0t26 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTC_0t42 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTC_0t10 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTC_0t30 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTC_0t35 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTC_0t39 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTC_0t38 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTC_0t46 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTC_0t43 tRNA-His K14226 tRNA-His; tRNA His D CTC_0t28 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTC_0t54 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTC_0t51 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTC_0t14 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t33 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t40 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t44 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTC_0t01 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTC_0t41 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTC_0t16 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t15 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t18 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t09 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t53 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t20 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CTC_0t36 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CTC_0t47 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTC_0t31 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTC_0t06 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTC_0t07 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTC_0t03 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTC_0t02 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTC_0t13 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTC_0t22 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTC_0t24 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTC_0t49 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTC_0t48 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CTC_0t23 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CTC_0t25 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CTC_0t11 tRNA-Val K14237 tRNA-Val; tRNA Val D CTC_00977 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTC_02393 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CTC_02392 glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CTC_01055 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTC_02194 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTC_00143 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CTC_00212 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTC_02286 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTC_00081 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTC_02622 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTC_00243 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTC_01220 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CTC_02302 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTC_00337 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTC_00261 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTC_00211 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTC_00966 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTC_02625 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTC_01958 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTC_02278 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTC_02277 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTC_02446 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTC_02453 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ctc03060] D CTC_02584 secY; protein translocase subunit secY K03076 secY; preprotein translocase subunit SecY D CTC_02205 secD; protein translocase subunit secD K03072 secD; preprotein translocase subunit SecD D CTC_02203 secF; protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D CTC_02208 yajC; protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D CTC_00096 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTC_00327 secA; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTC_01249 signal recognition particle, subunit ffh/srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTC_01246 ftsY; signal recognition particle receptor ftsY K03110 ftsY; fused signal recognition particle receptor D CTC_01894 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CTC_01253 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CTC_01615 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ctc04122] D CTC_01459 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_01050 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_01052 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CTC_01457 tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CTC_01750 moeB; molybdopterin biosynthesis protein moeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:ctc03018] D CTC_00382 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTC_01280 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CTC_00384 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTC_01999 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_02184 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_01499 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_01856 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_02090 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CTC_00296 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CTC_01290 hydrolase, predicted metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D CTC_01058 putative Zn-dependent hydrolase (beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-] D CTC_02490 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTC_02031 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D CTC_02413 groE; 60 kDa chaperonin groEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:ctc03030] D CTC_01116 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTC_02491 DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTC_01271 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CTC_00075 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTC_00221 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTC_02041 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTC_00093 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTC_00114 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CTC_02011 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CTC_00108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTC_01681 single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTC_01255 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CTC_02103 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTC_02394 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ctc03410] D CTC_02418 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D CTC_00355 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CTC_01030 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CTC_00242 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CTC_00062 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CTC_01610 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CTC_01745 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CTC_02103 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTC_01744 recJ; single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTC_02394 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ctc03420] D CTC_00194 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CTC_02503 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CTC_02504 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CTC_02497 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CTC_02395 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_00984 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_00692 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_02460 ATP-dependent DNA helicase rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_02103 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTC_02394 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ctc03430] D CTC_01302 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D CTC_02274 mutS; DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2 D CTC_01301 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D CTC_02395 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_00984 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_00692 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_02460 ATP-dependent DNA helicase rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_01578 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CTC_01744 recJ; single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTC_00108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTC_01681 single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTC_02491 DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTC_01271 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CTC_00093 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTC_00075 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTC_02041 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTC_00221 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTC_01116 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTC_02394 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTC_00387 putative adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:ctc03440] D CTC_01744 recJ; single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTC_00108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTC_01681 single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTC_00092 recF; recFprotein K03629 recF; DNA replication and repair protein RecF D CTC_02017 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O) D CTC_00073 recR; recombination protein recR K06187 recR; recombination protein RecR D CTC_01289 recA; recA protein K03553 recA; recombination protein RecA D CTC_02103 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTC_02212 ruvA; holliday junction DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D CTC_02211 ruvB; holliday junction DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CTC_01231 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CTC_00322 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTC_02491 DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTC_01271 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CTC_00093 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTC_00075 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTC_02041 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTC_00221 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTC_01116 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTC_01218 primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ctc02010] D CTC_01393 taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D CTC_01392 tauC; taurine transport system permease protein tauC K15552 tauC; taurine transport system permease protein D CTC_01394 tauB; putative taurine transport ATP-binding protein tauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CTC_00274 iron(III)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D CTC_01703 2-aminoethylphosphonate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CTC_00275 sfuB; iron(III)-transport system permease protein sfuB K02011 afuB; iron(III) transport system permease protein D CTC_01701 transport system permease, iron(III) or 2-aminoethylphosphonate transport K02011 afuB; iron(III) transport system permease protein D CTC_00276 sfuC; iron(III)-transport ATP-binding protein sfuC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CTC_01702 ABC-transporter ATP-binding protein, iron(III) K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CTC_02340 glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CTC_02341 putative glycine-betaine binding permease protein K02001 proW; glycine betaine/proline transport system permease protein D CTC_02342 glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CTC_00373 glycine/betaine transport system permease protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CTC_00374 glycine/betaine transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CTC_00369 tmpC; membrane lipoprotein tmpC precursor K07335 bmpA; basic membrane protein A and related proteins D CTC_00371 mglC; galactoside transport system permease protein mglC K23535 nupB; general nucleoside transport system permease protein D CTC_00372 rbsC; ribose transport system permease protein rbsC K23536 nupC; general nucleoside transport system permease protein D CTC_00370 sugar transport ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D CTC_00907 D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D CTC_02347 D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D CTC_02349 rbsC; ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein D CTC_00906 rbsC; ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein D CTC_00905 rbsA; ribose transport ATP-binding protein rbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CTC_02350 rbsA; ribose transport ATP-binding protein rbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CTC_02351 rbsD; high affinity ribose transport protein rbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D CTC_00860 D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein D CTC_00862 mglC; galactoside transport system permease protein mglC K10541 mglC; methyl-galactoside transport system permease protein D CTC_00861 mglA; galactoside transport ATP-binding protein mglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D CTC_01132 phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D CTC_01133 pstC; phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein D CTC_01134 ABC transporter permease protein K02038 pstA; phosphate transport system permease protein D CTC_01135 pstB; phosphate transport ATP-binding protein pstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CTC_01352 ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CTC_01353 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein D CTC_01355 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CTC_02360 znuA; high-affinity Zinc uptake system protein znuA K09815 znuA; zinc transport system substrate-binding protein D CTC_02362 znuB; high-affinity Zinc uptake system membrane protein znuB K09816 znuB; zinc transport system permease protein D CTC_02361 znuC; high-affinity Zinc uptake system ATP-binding protein znuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CTC_00723 cbiM; cobalt transport protein cbiM K02007 cbiM; cobalt/nickel transport system permease protein D CTC_00724 cbiQ; cobalt transport protein cbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CTC_02091 bioY; bioY protein K03523 bioY; biotin transport system substrate-specific component D CTC_01861 bioY; bioY protein K03523 bioY; biotin transport system substrate-specific component D CTC_02574 cbiQ; cobalt transport protein cbiQ K16785 ecfT; energy-coupling factor transport system permease protein D CTC_00751 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D CTC_02576 cobalt transport ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CTC_02575 cobalt transport ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CTC_01485 natB; Na+ ABC transporter natB K09696 natB; sodium transport system permease protein D CTC_01486 natA; sodium export ATP-binding protein natA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D CTC_01802 membrane spanning protein K19310 bcrB; bacitracin transport system permease protein D CTC_01803 bcrA; bacitracin transport ATP-binding protein bcrA K19309 bcrA; bacitracin transport system ATP-binding protein D CTC_00626 spaE; lantibiotic permease protein spaE/mutE K20491 nisE; lantibiotic transport system permease protein D CTC_00627 spaG; lantibiotic transport-associated permease spaG/mutG K20492 nisG; lantibiotic transport system permease protein D CTC_00625 spaF; lantibiotic transport ATP-binding protein spaF/mutF K20490 nisF; lantibiotic transport system ATP-binding protein D CTC_02509 ftsX; cell division protein ftsX K09811 ftsX; cell division transport system permease protein D CTC_02510 ftsE; cell division ATP-binding protein ftsE K09812 ftsE; cell division transport system ATP-binding protein D CTC_01986 membrane spanning protein K16919 ytrC_D; acetoin utilization transport system permease protein D CTC_01985 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein D CTC_00914 transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CTC_01410 transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CTC_00915 transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CTC_01408 transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CTC_00425 multidrug resistance ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CTC_00426 multidrug resistance ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:ctc02060] D CTC_01771 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CTC_00278 PTS system, glucose-specific IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 03070 Bacterial secretion system [PATH:ctc03070] D CTC_02205 secD; protein translocase subunit secD K03072 secD; preprotein translocase subunit SecD D CTC_02203 secF; protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D CTC_02584 secY; protein translocase subunit secY K03076 secY; preprotein translocase subunit SecY D CTC_02208 yajC; protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D CTC_00096 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTC_00327 secA; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTC_01246 ftsY; signal recognition particle receptor ftsY K03110 ftsY; fused signal recognition particle receptor D CTC_01249 signal recognition particle, subunit ffh/srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:ctc02020] D CTC_01131 phoR; phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CTC_01130 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CTC_00411 phoP; alkaline phosphatase synthesis transcriptional regulatory protein phoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CTC_00659 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CTC_01132 phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D CTC_00192 periplasmic trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTC_00850 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTC_01679 flagellin K02406 fliC; flagellin D CTC_01691 flagellin K02406 fliC; flagellin D CTC_01715 flagellin K02406 fliC; flagellin D CTC_01653 fliA; RNA polymerase sigma factor for flagellar operon fliA K02405 fliA; RNA polymerase sigma factor FliA D CTC_01666 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D CTC_00189 transcriptional regulatory protein K07775 resD; two-component system, OmpR family, response regulator ResD D CTC_00094 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D CTC_p24 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein D CTC_p25 ABC transporter-associated permease K11636 yxdM; putative ABC transport system permease protein D CTC_00805 two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR D CTC_00629 spaK; subtilin biosynthesis sensor protein spaK K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CTC_00598 two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CTC_00628 spaR; subtilin biosynthesis regulatory protein spaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D CTC_00625 spaF; lantibiotic transport ATP-binding protein spaF/mutF K20490 nisF; lantibiotic transport system ATP-binding protein D CTC_00626 spaE; lantibiotic permease protein spaE/mutE K20491 nisE; lantibiotic transport system permease protein D CTC_00627 spaG; lantibiotic transport-associated permease spaG/mutG K20492 nisG; lantibiotic transport system permease protein D CTC_01569 stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D CTC_02557 citC; citC, [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D CTC_02560 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CTC_02467 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CTC_02466 citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D CTC_02559 citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D CTC_02556 citX; citX protein K05964 citX; holo-ACP synthase [EC:2.7.7.61] D CTC_02555 citG; citG protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D CTC_00356 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CTC_02463 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CTC_01486 natA; sodium export ATP-binding protein natA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D CTC_01485 natB; Na+ ABC transporter natB K09696 natB; sodium transport system permease protein D CTC_00171 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTC_02322 transcriptional response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTC_00376 rpoN; RNA polymerase sigma-54 factor rpoN K03092 rpoN; RNA polymerase sigma-54 factor D CTC_01601 conserved protein K02650 pilA; type IV pilus assembly protein PilA D CTC_01732 cheR; chemotaxis protein methyltransferase cheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CTC_01211 tlpA; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein D CTC_01507 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00924 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01536 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01512 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01881 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01857 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01839 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00888 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01308 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00474 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00942 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00952 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01728 cheW; putative chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D CTC_01735 cheW; chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D CTC_01731 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CTC_01729 cheY; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CTC_01733 protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CTC_02488 transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CTC_00566 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CTC_01848 yesM; two-component sensor kinase yesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CTC_01849 transcriptional regulatory protein K07720 yesN; two-component system, response regulator YesN D CTC_00935 transcriptional regulatory protein K07720 yesN; two-component system, response regulator YesN D CTC_00311 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D CTC_01763 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ctc02024] D CTC_02488 transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CTC_00671 riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CTC_00140 conserved membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CTC_01888 tetanolysin O K11031 slo; thiol-activated cytolysin D CTC_01900 periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTC_01379 periplasmic transport protein, nickel or dipeptide transport K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTC_01400 periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTC_01401 transport system permease, nickel or dipeptide K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTC_01901 dppB; dipeptide transport system permease protein dppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTC_01378 putative permease, nickel or dipeptide transport K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTC_01377 putative permease, nickel or dipeptide transport K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTC_01402 transport system permease, dipeptide or nickel K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTC_01902 dppC; dipeptide transport system permease protein dppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTC_01376 putative oligopeptide ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTC_01403 oppD; oligopeptide transport ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTC_01903 dppD; dipeptide transport ATP-binding protein dppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTC_01404 peptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTC_01375 putative oligopeptide ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTC_01904 dppF; dipeptide transport ATP-binding protein dppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTC_00096 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTC_00612 glutamyl endopeptidase precursor K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D CTC_02584 secY; protein translocase subunit secY K03076 secY; preprotein translocase subunit SecY D CTC_02208 yajC; protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D CTC_00327 secA; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTC_01246 ftsY; signal recognition particle receptor ftsY K03110 ftsY; fused signal recognition particle receptor D CTC_01249 signal recognition particle, subunit ffh/srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTC_01569 stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D CTC_00990 conserved protein, phospholipase C related K01114 plc; phospholipase C [EC:3.1.4.3] D CTC_00629 spaK; subtilin biosynthesis sensor protein spaK K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CTC_00598 two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CTC_00628 spaR; subtilin biosynthesis regulatory protein spaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D CTC_00625 spaF; lantibiotic transport ATP-binding protein spaF/mutF K20490 nisF; lantibiotic transport system ATP-binding protein D CTC_00626 spaE; lantibiotic permease protein spaE/mutE K20491 nisE; lantibiotic transport system permease protein D CTC_00627 spaG; lantibiotic transport-associated permease spaG/mutG K20492 nisG; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ctc02030] D CTC_01211 tlpA; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein D CTC_01507 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00924 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01536 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01512 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01881 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01857 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01839 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00888 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01308 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00474 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00942 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00952 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00907 D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D CTC_02347 D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D CTC_00860 D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein D CTC_01731 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CTC_01728 cheW; putative chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D CTC_01735 cheW; chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D CTC_01729 cheY; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CTC_01730 cheC; chemotaxis protein cheC K03410 cheC; chemotaxis protein CheC D CTC_01733 protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CTC_01734 cheD; chemotaxis protein cheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D CTC_01732 cheR; chemotaxis protein methyltransferase cheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CTC_01675 fliG; flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG D CTC_01727 fliM; flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM D CTC_01726 fliN; flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN D CTC_01666 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D CTC_01665 motB; chemotaxis motB protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ctc02040] D CTC_01676 fliF; flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF D CTC_01675 fliG; flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG D CTC_01674 fliH; putative fliH protein K02411 fliH; flagellar assembly protein FliH D CTC_01673 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTC_01672 fliJ; flagellar protein fliJ K02413 fliJ; flagellar protein FliJ D CTC_01671 putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D CTC_01664 fliL; putative flagellar protein fliL K02415 fliL; flagellar protein FliL D CTC_01727 fliM; flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM D CTC_01726 fliN; flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN D CTC_01663 putative flagellar formation protein K02418 fliO; flagellar protein FliO/FliZ D CTC_01662 fliP; flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP D CTC_01657 flhA; flagellar biosynthetic protein flhA K02400 flhA; flagellar biosynthesis protein FlhA D CTC_01660 fliR; flagellar biosynthetic protein fliR/B K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D CTC_01678 flgB; flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB D CTC_01677 flgC; flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC D CTC_01669 flgD; putative basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CTC_01667 flgE; flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE D CTC_01651 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D CTC_01650 flgG; flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG D CTC_01724 flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1 D CTC_01722 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D CTC_01679 flagellin K02406 fliC; flagellin D CTC_01691 flagellin K02406 fliC; flagellin D CTC_01715 flagellin K02406 fliC; flagellin D CTC_01718 fliD; flagellar cap protein fliD K02407 fliD; flagellar hook-associated protein 2 D CTC_01719 fliS; flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS D CTC_01666 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D CTC_01665 motB; chemotaxis motB protein K02557 motB; chemotaxis protein MotB D CTC_02010 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor D CTC_00867 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor D CTC_00376 rpoN; RNA polymerase sigma-54 factor rpoN K03092 rpoN; RNA polymerase sigma-54 factor D CTC_01653 fliA; RNA polymerase sigma factor for flagellar operon fliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CTC_00382 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D CTC_01806 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ctc01501] D CTC_02158 putative anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CTC_02242 multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CTC_02071 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CTC_01204 hypothetical protein K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:ctc01502] D CTC_00805 two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR D CTC_00291 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTC_00683 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTC_02513 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CTC_01631 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CTC_01630 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTC_01743 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ctc01503] D CTC_02570 germination-specific N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_02092 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_00260 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_01009 conserved protein, putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_01537 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_00365 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_00192 periplasmic trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTC_00850 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ctc01000] C 01001 Protein kinases [BR:ctc01001] D CTC_01225 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CTC_01131 phoR; phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CTC_00629 spaK; subtilin biosynthesis sensor protein spaK K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CTC_00598 two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CTC_01524 dpiB; sensor kinase dpiB K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D CTC_01978 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CTC_00934 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CTC_01731 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CTC_01848 yesM; two-component sensor kinase yesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CTC_02178 ethanolamine utilization sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ctc01009] D CTC_02490 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTC_01489 htpG; heat shock protein htpG K04079 HSP90A; molecular chaperone HtpG D CTC_01224 phosphoprotein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:ctc01002] D CTC_01615 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CTC_02411 pilD; type IV prepilin leader peptidase pilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CTC_02040 spore protease K06012 gpr; spore protease [EC:3.4.24.78] D CTC_01125 putative sporulation sigma-E factor processing peptidase K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D CTC_02409 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CTC_00227 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTC_02078 hypothetical lipoprotein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTC_01965 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CTC_02543 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTC_00573 protease I K05520 yhbO; deglycase [EC:3.5.1.124] D CTC_01756 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124] D CTC_01198 conserved protein K07284 srtA; sortase A [EC:3.4.22.70] D CTC_01428 membrane spanning protein K07052 K07052; CAAX protease family protein D CTC_00817 conserved protein, amino terminal protease family K07052 K07052; CAAX protease family protein D CTC_02368 putative protease K07052 K07052; CAAX protease family protein D CTC_01957 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D CTC_p33 colT; collagenase ColT K01387 colA; microbial collagenase [EC:3.4.24.3] D CTC_00595 gamma-D-glutamyl-L-diamino acid endopeptidase I K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11] D CTC_00810 Zn-dependent peptidase, insulinase family K06972 PITRM1; presequence protease [EC:3.4.24.-] D CTC_01866 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CTC_00571 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CTC_01945 XAA-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CTC_00423 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CTC_02317 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CTC_02398 putative amino acid amidohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A D CTC_02582 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CTC_01592 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CTC_p60 tetX; tetanus toxin tetX K08644 tetX; tentoxilysin [EC:3.4.24.68] D CTC_01997 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D CTC_00205 ftsH; cell division protein ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTC_02461 ftsH; cell division protein ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTC_00531 ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTC_01164 htpX; protease htpX-like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CTC_02065 putative stage IV sporulation protein FB, predicted metalloprotease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D CTC_01269 membrane metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CTC_00612 glutamyl endopeptidase precursor K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D CTC_00192 periplasmic trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTC_00850 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTC_00139 intracellular alkaline serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-] D CTC_01530 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_01525 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_02051 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_00981 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_02375 ATP-dependent clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CTC_00113 ATP-dependent protease LA K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CTC_02372 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CTC_02373 ATP-dependent protease La-like protein K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D CTC_01298 lexA; lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CTC_01253 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CTC_02507 tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CTC_00882 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CTC_00281 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D CTC_00530 conserved membrane protein (rhomboid family) K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D CTC_01570 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D CTC_02275 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D CTC_01063 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:ctc01003] D CTC_00289 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D CTC_02242 multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CTC_02252 teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D CTC_00310 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CTC_02455 Cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ctc01005] D CTC_00908 kpsF; polysialic acid capsule expression protein kpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CTC_00310 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ctc01011] D CTC_00169 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTC_00314 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTC_02496 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTC_00185 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CTC_00213 UDP-N-acetylmuramoylalanine-d-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTC_01632 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTC_00291 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTC_00683 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTC_02513 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CTC_00259 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CTC_00409 putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CTC_01630 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTC_01743 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CTC_00545 bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CTC_02255 mviN; virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase D CTC_02261 mviN; virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase D CTC_02242 multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CTC_02071 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CTC_01633 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D CTC_02500 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D CTC_01530 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_01525 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_02051 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_00981 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTC_00227 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTC_02078 hypothetical lipoprotein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CTC_01198 conserved protein K07284 srtA; sortase A [EC:3.4.22.70] D CTC_02100 soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CTC_01061 4-amino-4-deoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CTC_00350 spore-cortex-lytic enzyme precursor K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CTC_00315 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D CTC_02570 germination-specific N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_02092 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_00260 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_01009 conserved protein, putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_01537 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_00365 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ctc01004] D CTC_00129 malonyl coA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTC_00127 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CTC_00859 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CTC_00131 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTC_00798 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTC_00130 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTC_00133 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTC_00128 enoyl-[acyl-carrier protein] reductase (NADH) K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D CTC_00881 putative arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CTC_01242 plsX; fatty acid/phospholipid synthesis protein plsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CTC_00354 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTC_00551 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ctc01008] D CTC_00823 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:ctc01006] D CTC_01577 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTC_01265 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTC_01360 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTC_01300 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:ctc01007] D CTC_00977 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTC_02446 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTC_02453 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CTC_02622 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTC_00966 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTC_00243 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTC_00261 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTC_02302 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTC_00337 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTC_00211 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTC_02194 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTC_00143 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CTC_01958 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTC_00212 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTC_00081 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTC_02625 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTC_02286 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTC_01055 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTC_02278 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTC_02277 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTC_01294 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_01309 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CTC_00825 putative aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CTC_00730 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CTC_01738 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CTC_01700 (2-aminoethyl)phosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D CTC_01638 pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D CTC_01707 putative perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ctc03000] D CTC_00639 transcriptional regulatory protein K13653 K13653; AraC family transcriptional regulator D CTC_01432 transcriptional regulatory protein K13653 K13653; AraC family transcriptional regulator D CTC_00630 transcriptional regulator K13653 K13653; AraC family transcriptional regulator D CTC_00399 transcriptional regulatory protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D CTC_01177 transcriptional regulatory protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D CTC_01212 transcriptional regulatory protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D CTC_00505 iolR; DNA-binding protein iolR K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor D CTC_02015 conserved protein with cbs domain K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D CTC_00863 lacI; transcriptional regulator of the lacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CTC_02346 catabolite control protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CTC_00263 predicted catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CTC_00971 transcriptional regulator, putative pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CTC_01984 gntR; transcriptional regulator, gntR family K07979 ytrA; GntR family transcriptional regulator D CTC_00568 asnC; regulatory protein asnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D CTC_02048 marR; transcriptional regulator, marR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CTC_01057 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CTC_00527 ferric uptake regulation protein (Fe2+/Zn2+) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CTC_02363 putative Zinc uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D CTC_02488 transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CTC_01876 transcriptional regulatory protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CTC_01923 catabolite gene activator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D CTC_01344 RRF2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D CTC_01049 RRF2 protein family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D CTC_01439 putative transcriptional regulatory protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D CTC_00601 padR; putative transcriptional regulator (padR family) K10947 K10947; PadR family transcriptional regulator D CTC_00452 iron-dependent transcriptional repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D CTC_00852 birA; putative transcriptional repressor of the biotin operon birA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CTC_00186 PUR operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D CTC_00556 signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CTC_00072 signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CTC_02428 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor D CTC_01260 codY; codY protein K03706 codY; transcriptional pleiotropic repressor D CTC_00277 transcriptional regulatory protein K03483 mtlR; mannitol operon transcriptional activator D CTC_01886 transcriptional regulatory protein K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D CTC_00196 stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D CTC_00103 parB; chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_01930 parB; chromosome partitioning parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_01936 parB; chromosome partitioning parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_00101 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_01759 glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator D CTC_01572 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CTC_02033 hrcA; heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor D CTC_02636 ctsR; transcriptional regulator ctsR K03708 ctsR; transcriptional regulator of stress and heat shock response D CTC_02531 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D CTC_00377 putative central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator D CTC_01613 pyrR; uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CTC_01129 4-hydroxybenzoate octaprenyltransferase K07738 nrdR; transcriptional repressor NrdR D CTC_01636 mraZ; mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ctc03021] D CTC_02578 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTC_02609 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTC_02608 DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTC_02010 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor D CTC_00867 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor D CTC_00553 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_00608 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_00665 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_00688 sigV; RNA polymerase sigma factor sigV K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_00618 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_01788 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_01786 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_01433 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_01817 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_01790 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CTC_01128 RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CTC_02246 RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CTC_01066 RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CTC_01126 RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CTC_02617 RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor D CTC_00376 rpoN; RNA polymerase sigma-54 factor rpoN K03092 rpoN; RNA polymerase sigma-54 factor D CTC_01653 fliA; RNA polymerase sigma factor for flagellar operon fliA K02405 fliA; RNA polymerase sigma factor FliA D CTC_01273 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D CTC_01581 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CTC_02614 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D CTC_00210 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA D CTC_01908 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA D CTC_00296 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ctc03019] D CTC_02062 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D CTC_01243 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTC_01058 putative Zn-dependent hydrolase (beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-] D CTC_01290 hydrolase, predicted metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D CTC_00384 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTC_00655 putative CMP-binding factor K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D CTC_01999 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_02184 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_01499 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_01856 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_02090 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CTC_00382 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTC_01280 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CTC_00296 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CTC_02490 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTC_02031 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D CTC_02413 groE; 60 kDa chaperonin groEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTC_02495 ATP-binding protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:ctc03011] D CTC_01519 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D CTC_01314 conserved protein K02945 RP-S1; small subunit ribosomal protein S1 D CTC_01261 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D CTC_02596 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CTC_02579 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D CTC_02605 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D CTC_02589 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D CTC_02571 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D CTC_02580 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D CTC_02606 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D CTC_02581 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D CTC_02611 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D CTC_02598 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CTC_02600 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D CTC_02599 LSU ribosomal protein L1E(= L4P) K02926 RP-L4; large subunit ribosomal protein L4 D CTC_02590 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D CTC_02588 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D CTC_00112 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D CTC_02610 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D CTC_02612 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CTC_02572 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D CTC_02593 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CTC_02585 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CTC_02595 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D CTC_02577 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D CTC_02587 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CTC_01252 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D CTC_02283 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D CTC_02060 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D CTC_02597 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D CTC_02591 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CTC_02058 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D CTC_00878 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D CTC_0r01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r13 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r16 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r15 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r18 5S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ctc03009] D CTC_01243 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTC_02018 GTP-binding protein era K03595 era; GTPase D CTC_02056 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D CTC_01273 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D CTC_01581 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CTC_02614 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D CTC_02399 putative ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CTC_00248 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CTC_01222 16S rRNA M(5)C 967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CTC_01232 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CTC_02028 conserved surface protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CTC_00100 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CTC_01635 mraW; S-adenosyl-methyltransferase mraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CTC_00226 corrin/porphyrin methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CTC_01574 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CTC_p27 rRNA (guanine-N1-) methyltransferase (Mycinamicin-resistance protein) K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CTC_02619 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CTC_00165 conserved protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CTC_01223 florfenicol resistance protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CTC_02481 tRNA (uracil-5-) -methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CTC_01941 tRNA (uracil-5-) -methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CTC_01319 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CTC_00986 ribosomal large subunit pseudouridine synthase D K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CTC_01614 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CTC_02052 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CTC_00155 tRNA pseudouridine synthase A K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D CTC_02445 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CTC_01250 rimM; 16S rRNA processing protein rimM K02860 rimM; 16S rRNA processing protein RimM D CTC_01287 Fe-S oxidoreductase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CTC_02029 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CTC_02062 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D CTC_01056 DNA integration/recombination protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CTC_02621 conserved protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D CTC_01999 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_02184 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_01499 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_01856 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CTC_01226 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CTC_01137 GTP-binding protein K03977 engA; GTPase D CTC_01254 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A D CTC_02227 hflX; GTP-binding protein hflX K03665 hflX; GTPase D CTC_00305 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CTC_02199 putative GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CTC_01276 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CTC_01272 protein associated with NUS operon K09748 rimP; ribosome maturation factor RimP D CTC_02021 metal-binding protein K07042 ybeY; probable rRNA maturation factor D CTC_00325 SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor D CTC_01643 GTP-binding protein K06942 ychF; ribosome-binding ATPase D CTC_01241 conserved protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ctc03016] D CTC_02190 metal dependent hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CTC_01205 poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CTC_00977 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTC_02625 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTC_00261 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTC_00337 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTC_00243 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTC_00966 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTC_00211 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTC_02194 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTC_01055 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTC_00143 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CTC_00212 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTC_02286 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTC_00081 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTC_02622 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTC_02302 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTC_01958 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTC_02278 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTC_02277 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTC_02446 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTC_02453 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CTC_02197 D-Tyr-tRNATyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CTC_02026 Hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CTC_00794 SAM-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CTC_01851 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CTC_02573 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CTC_01278 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CTC_01459 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_01050 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_00305 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CTC_01300 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CTC_00098 thdF; thiophene and furan oxidation protein thdF K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CTC_00099 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CTC_00640 putative DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D CTC_00078 cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CTC_00208 nifR; nitrogen regulation protein nifR3 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CTC_01303 miaB; miaB protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CTC_02027 Fe-S oxidoreductase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D CTC_01251 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CTC_02008 conserved protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D CTC_00367 rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CTC_02279 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CTC_01052 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CTC_01457 tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CTC_00320 ATPase of the pp-loop superfamily K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CTC_00831 conserved protein K13628 iscA; iron-sulfur cluster assembly protein D CTC_02210 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CTC_00352 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D CTC_02209 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CTC_00202 mesJ; cell cycle protein mesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CTC_02444 O-sialoglycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CTC_02432 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CTC_02443 ATP/GTP hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CTC_00868 dinucleotide-utilizing enzyme K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CTC_01238 conserved protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D CTC_00384 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTC_01280 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ctc03012] D CTC_01275 bacterial protein translation initiation factor 2 K02519 infB; translation initiation factor IF-2 D CTC_02285 bacterial protein translation initiation factor 3 K02520 infC; translation initiation factor IF-3 D CTC_02429 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CTC_01262 protein translation elongation factor TS K02357 tsf; elongation factor Ts D CTC_02602 protein translation elongation factor TU K02358 tuf; elongation factor Tu D CTC_02616 protein translation elongation factor TU K02358 tuf; elongation factor Tu D CTC_02604 protein translation elongation factor G K02355 fusA; elongation factor G D CTC_02640 protein translation elongation factor G K02355 fusA; elongation factor G D CTC_00302 bacterial peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CTC_01264 ribosome recycling factor K02838 frr; ribosome recycling factor D CTC_00301 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CTC_00193 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CTC_01591 protein translation elongation factor P K02356 efp; elongation factor P D CTC_00328 bacterial peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D CTC_02451 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ctc03110] D CTC_00536 clpB; clpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CTC_02633 mecB; negative regulator of genetic competence mecB/clpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CTC_00060 mecB; negative regulator of genetic competence mecB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CTC_02374 clpX; ATP-dependent clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CTC_01489 htpG; heat shock protein htpG K04079 HSP90A; molecular chaperone HtpG D CTC_02031 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D CTC_02413 groE; 60 kDa chaperonin groEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTC_02030 dnaJ; chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D CTC_02291 hsp33 (redox regulated chaperone) K04083 hslO; molecular chaperone Hsp33 D CTC_02032 grpE; putative grpE protein K03687 GRPE; molecular chaperone GrpE D CTC_02469 heat shock protein, molecular chaperone K13993 HSP20; HSP20 family protein D CTC_00192 periplasmic trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTC_00850 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTC_00205 ftsH; cell division protein ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTC_02461 ftsH; cell division protein ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTC_00531 ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTC_00678 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CTC_00195 putative peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D CTC_00215 putative peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D CTC_02553 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:ctc04131] D CTC_01894 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CTC_00378 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTC_02489 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTC_01489 htpG; heat shock protein htpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:ctc04121] C 03051 Proteasome [BR:ctc03051] D CTC_01489 htpG; heat shock protein htpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ctc03032] D CTC_00094 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D CTC_00114 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CTC_00123 dnaC; DNA replication protein dnaC K02315 dnaC; DNA replication protein DnaC D CTC_02011 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CTC_00108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTC_01681 single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTC_02491 DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTC_01271 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CTC_00093 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTC_02041 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTC_00221 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTC_01116 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTC_00075 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTC_01255 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CTC_02103 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTC_02394 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTC_00387 putative adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CTC_00090 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTC_00091 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTC_01766 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CTC_01767 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CTC_01259 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CTC_00403 DNA topoisomerase I K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D CTC_01836 DNA topoisomerase I K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ctc03036] D CTC_01243 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTC_00094 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D CTC_01081 general stress protein 20U K04047 dps; starvation-inducible DNA-binding protein D CTC_01245 chromosome segregation protein smc2 K03529 smc; chromosome segregation protein D CTC_01529 dihydrofolate reductase K05896 scpA; segregation and condensation protein A D CTC_01528 conserved protein K06024 scpB; segregation and condensation protein B D CTC_01122 ftsA; cell division protein ftsA K03590 ftsA; cell division protein FtsA D CTC_02510 ftsE; cell division ATP-binding protein ftsE K09812 ftsE; cell division transport system ATP-binding protein D CTC_01286 ftsK; putative stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CTC_01634 conserved protein K03586 ftsL; cell division protein FtsL D CTC_01628 ftsQ; cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ D CTC_01629 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D CTC_02509 ftsX; cell division protein ftsX K09811 ftsX; cell division transport system permease protein D CTC_01124 ftsZ; cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ D CTC_02276 conserved protein K09888 zapA; cell division protein ZapA D CTC_02570 germination-specific N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_02092 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_00260 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_01009 conserved protein, putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_01537 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_00365 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_02070 minC; septum site-determining protein minC K03610 minC; septum site-determining protein MinC D CTC_02069 minD; septum site-determining protein minD K03609 minD; septum site-determining protein MinD D CTC_01621 minicell-associated protein K04074 divIVA; cell division initiation protein D CTC_01623 conserved protein K09772 sepF; cell division inhibitor SepF D CTC_02074 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTC_00318 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTC_02073 mreC; rod shape-determining protein mreC K03570 mreC; rod shape-determining protein MreC D CTC_02072 conserved protein K03571 mreD; rod shape-determining protein MreD D CTC_02067 rodA; rod shape-determining protein rodA K05837 rodA; rod shape determining protein RodA D CTC_00102 parA; chromosome partitioning protein parA K03496 parA; chromosome partitioning protein D CTC_01937 sporulation initiation inhibitor soj family protein K03496 parA; chromosome partitioning protein D CTC_00103 parB; chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_01930 parB; chromosome partitioning parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_01936 parB; chromosome partitioning parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_00101 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_01766 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CTC_01767 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CTC_00099 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CTC_00100 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CTC_01532 integrase/recombinase K04763 xerD; integrase/recombinase XerD D CTC_01567 DNA integration/recombination protein K04763 xerD; integrase/recombinase XerD D CTC_01296 putative integrase, recombinase K04763 xerD; integrase/recombinase XerD D CTC_00198 conserved protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D CTC_00636 conserved protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D CTC_02369 GTP-binding protein K03978 engB; GTP-binding protein D CTC_02493 conserved protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:ctc03400] D CTC_01413 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CTC_01030 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CTC_02418 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D CTC_00355 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CTC_01909 mutT; mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CTC_01210 deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CTC_00242 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CTC_00062 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CTC_01610 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CTC_01745 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CTC_01744 recJ; single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTC_02394 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTC_02103 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CTC_02503 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CTC_02504 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CTC_02497 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CTC_02395 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_00984 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_00692 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_02460 ATP-dependent DNA helicase rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTC_02609 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTC_02608 DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTC_02578 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTC_00194 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CTC_01302 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D CTC_02274 mutS; DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2 D CTC_01301 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D CTC_01578 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CTC_02491 DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTC_01271 DNA polymerase III, alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CTC_00093 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTC_02041 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTC_00221 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CTC_01116 DNA polymerase III alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTC_00075 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTC_00108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTC_01681 single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTC_00387 putative adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CTC_00322 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTC_01289 recA; recA protein K03553 recA; recombination protein RecA D CTC_02212 ruvA; holliday junction DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D CTC_02211 ruvB; holliday junction DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CTC_01218 primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CTC_00579 sbcC; exonuclease sbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D CTC_00578 sbcD; exonuclease sbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D CTC_02630 radA; DNA repair protein radA K04485 radA; DNA repair protein RadA/Sms D CTC_00092 recF; recFprotein K03629 recF; DNA replication and repair protein RecF D CTC_01231 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CTC_02017 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O) D CTC_00073 recR; recombination protein recR K06187 recR; recombination protein RecR D CTC_01571 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N) D CTC_00714 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D CTC_00686 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D CTC_01148 maturase-related protein K15342 cas1; CRISP-associated protein Cas1 D CTC_01463 conserved protein, possibly maturase-related K15342 cas1; CRISP-associated protein Cas1 D CTC_00090 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTC_00091 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTC_01259 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CTC_01075 phage-related protein K07455 recT; recombination protein RecT D CTC_02144 recT; recT protein K07455 recT; recombination protein RecT D CTC_02090 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CTC_00437 putative DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CTC_01298 lexA; lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CTC_02337 transcriptional regulatory protein K03565 recX; regulatory protein D CTC_00574 ribonucleoside-diphosphate reductase (vitamin B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTC_01277 mgpA; mgpA protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:ctc03029] D CTC_01275 bacterial protein translation initiation factor 2 K02519 infB; translation initiation factor IF-2 D CTC_02285 bacterial protein translation initiation factor 3 K02520 infC; translation initiation factor IF-3 D CTC_01262 protein translation elongation factor TS K02357 tsf; elongation factor Ts D CTC_02602 protein translation elongation factor TU K02358 tuf; elongation factor Tu D CTC_02616 protein translation elongation factor TU K02358 tuf; elongation factor Tu D CTC_02604 protein translation elongation factor G K02355 fusA; elongation factor G D CTC_02640 protein translation elongation factor G K02355 fusA; elongation factor G D CTC_01368 mitochondrial ATP-dependent RNA helicase suv3 precursor K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D CTC_02018 GTP-binding protein era K03595 era; GTPase D CTC_02446 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTC_00337 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTC_02194 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTC_00212 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTC_00966 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTC_02393 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CTC_02392 glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CTC_00108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CTC_01681 single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTC_02031 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D CTC_02032 grpE; putative grpE protein K03687 GRPE; molecular chaperone GrpE D CTC_02413 groE; 60 kDa chaperonin groEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTC_02030 dnaJ; chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D CTC_01459 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_01050 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_00096 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTC_01489 htpG; heat shock protein htpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ctc02000] D CTC_00914 transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CTC_01410 transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CTC_00915 transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CTC_01408 transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CTC_00425 multidrug resistance ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CTC_00426 multidrug resistance ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CTC_01811 multidrug resistance ABC transporter ATP-binding and permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CTC_01199 multidrug resistance protein 1 K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D CTC_01201 transporter K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D CTC_01163 transporter K15738 uup; ABC transport system ATP-binding/permease protein D CTC_01393 taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D CTC_01392 tauC; taurine transport system permease protein tauC K15552 tauC; taurine transport system permease protein D CTC_01394 tauB; putative taurine transport ATP-binding protein tauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CTC_00274 iron(III)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D CTC_01703 2-aminoethylphosphonate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CTC_00275 sfuB; iron(III)-transport system permease protein sfuB K02011 afuB; iron(III) transport system permease protein D CTC_01701 transport system permease, iron(III) or 2-aminoethylphosphonate transport K02011 afuB; iron(III) transport system permease protein D CTC_00276 sfuC; iron(III)-transport ATP-binding protein sfuC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CTC_01702 ABC-transporter ATP-binding protein, iron(III) K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CTC_02340 glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CTC_02341 putative glycine-betaine binding permease protein K02001 proW; glycine betaine/proline transport system permease protein D CTC_02342 glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CTC_00373 glycine/betaine transport system permease protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CTC_00374 glycine/betaine transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CTC_00407 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CTC_00406 ABC transporter permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CTC_00405 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CTC_00860 D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein D CTC_00862 mglC; galactoside transport system permease protein mglC K10541 mglC; methyl-galactoside transport system permease protein D CTC_00861 mglA; galactoside transport ATP-binding protein mglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D CTC_00907 D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D CTC_02347 D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D CTC_02349 rbsC; ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein D CTC_00906 rbsC; ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein D CTC_00905 rbsA; ribose transport ATP-binding protein rbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CTC_02350 rbsA; ribose transport ATP-binding protein rbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CTC_00369 tmpC; membrane lipoprotein tmpC precursor K07335 bmpA; basic membrane protein A and related proteins D CTC_00371 mglC; galactoside transport system permease protein mglC K23535 nupB; general nucleoside transport system permease protein D CTC_00372 rbsC; ribose transport system permease protein rbsC K23536 nupC; general nucleoside transport system permease protein D CTC_00370 sugar transport ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D CTC_01132 phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D CTC_01133 pstC; phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein D CTC_01134 ABC transporter permease protein K02038 pstA; phosphate transport system permease protein D CTC_01135 pstB; phosphate transport ATP-binding protein pstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CTC_01352 ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CTC_01353 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein D CTC_01355 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CTC_00557 cystine/glutamine-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CTC_00558 cystine/glutamine-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CTC_00559 cystine/glutamine permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D CTC_00560 glnQ; glutamine transport ATP-binding protein glnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CTC_01900 periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTC_01379 periplasmic transport protein, nickel or dipeptide transport K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTC_01400 periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTC_01401 transport system permease, nickel or dipeptide K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTC_01901 dppB; dipeptide transport system permease protein dppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTC_01378 putative permease, nickel or dipeptide transport K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTC_01377 putative permease, nickel or dipeptide transport K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTC_01402 transport system permease, dipeptide or nickel K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTC_01902 dppC; dipeptide transport system permease protein dppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTC_01376 putative oligopeptide ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTC_01403 oppD; oligopeptide transport ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTC_01903 dppD; dipeptide transport ATP-binding protein dppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTC_01404 peptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTC_01375 putative oligopeptide ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTC_01904 dppF; dipeptide transport ATP-binding protein dppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTC_01195 iron(III) dicitrate-binding periplasmic protein K25113 htsA; heme transport system substrate-binding protein D CTC_01196 putative ferrichrome ABC transporter K25114 htsB; heme transport system permease protein D CTC_01197 fepC; ferric enterobactin transport ATP-binding protein fepC K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5] D CTC_00957 hmuT; iron(III) dicitrate-binding periplasmic protein hmuT K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CTC_00960 putative iron(III) dicitrate-binding periplasmic protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CTC_00961 fecD; iron(III) dicitrate transport system permease protein fecD K02015 ABC.FEV.P; iron complex transport system permease protein D CTC_00956 fecD; putative iron(III) dicitrate transport system permease protein fecD/hmuV K02015 ABC.FEV.P; iron complex transport system permease protein D CTC_00962 fecE; putative hemin transport system ATP-binding protein fecE K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CTC_00954 transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CTC_00785 iron(III) dicitrate-binding periplasmic protein K25034 btuF; cobalamin transport system substrate-binding protein D CTC_01372 ferrichrome-binding periplasmic protein K25034 btuF; cobalamin transport system substrate-binding protein D CTC_00784 fecD; iron(III) dicitrate transport system permease protein fecD K25027 btuC; cobalamin transport system permease protein D CTC_01371 fecD; iron(III) dicitrate transport system permease protein fecD K25027 btuC; cobalamin transport system permease protein D CTC_00783 fepC; ferric enterobactin transport ATP-binding protein fepC K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D CTC_01370 fepC; ferric enterobactin transport ATP-binding protein fepC K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D CTC_02360 znuA; high-affinity Zinc uptake system protein znuA K09815 znuA; zinc transport system substrate-binding protein D CTC_02362 znuB; high-affinity Zinc uptake system membrane protein znuB K09816 znuB; zinc transport system permease protein D CTC_02361 znuC; high-affinity Zinc uptake system ATP-binding protein znuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CTC_00724 cbiQ; cobalt transport protein cbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CTC_00723 cbiM; cobalt transport protein cbiM K02007 cbiM; cobalt/nickel transport system permease protein D CTC_02091 bioY; bioY protein K03523 bioY; biotin transport system substrate-specific component D CTC_01861 bioY; bioY protein K03523 bioY; biotin transport system substrate-specific component D CTC_00754 conserved membrane protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D CTC_02574 cbiQ; cobalt transport protein cbiQ K16785 ecfT; energy-coupling factor transport system permease protein D CTC_00751 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D CTC_02576 cobalt transport ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CTC_02575 cobalt transport ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CTC_00753 cobalt transport ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CTC_02442 putative zinc-binding lipoprotein (adhesin B) K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CTC_01485 natB; Na+ ABC transporter natB K09696 natB; sodium transport system permease protein D CTC_01486 natA; sodium export ATP-binding protein natA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D CTC_00626 spaE; lantibiotic permease protein spaE/mutE K20491 nisE; lantibiotic transport system permease protein D CTC_00627 spaG; lantibiotic transport-associated permease spaG/mutG K20492 nisG; lantibiotic transport system permease protein D CTC_00625 spaF; lantibiotic transport ATP-binding protein spaF/mutF K20490 nisF; lantibiotic transport system ATP-binding protein D CTC_01802 membrane spanning protein K19310 bcrB; bacitracin transport system permease protein D CTC_01803 bcrA; bacitracin transport ATP-binding protein bcrA K19309 bcrA; bacitracin transport system ATP-binding protein D CTC_p25 ABC transporter-associated permease K11636 yxdM; putative ABC transport system permease protein D CTC_p24 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein D CTC_01986 membrane spanning protein K16919 ytrC_D; acetoin utilization transport system permease protein D CTC_01985 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein D CTC_02509 ftsX; cell division protein ftsX K09811 ftsX; cell division transport system permease protein D CTC_02510 ftsE; cell division ATP-binding protein ftsE K09812 ftsE; cell division transport system ATP-binding protein D CTC_00802 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_00160 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_01686 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_00241 hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_01492 membrane spanning protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_00646 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_01358 putative permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_01891 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_00800 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_00801 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CTC_00633 transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_00240 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_01892 transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_00803 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_01987 transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_01685 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_00162 ABC-type multidrug transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_p37 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_01493 transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_01357 bcrA; ABC-transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_p31 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_00647 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CTC_00486 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_01418 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_01915 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_00919 membrane-spanning protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_01820 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_p53 putative ABC transporter-associated permease K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_00396 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_00959 membrane-spanning protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_02097 membrane spanning protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_02099 membrane spanning protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_p16 ABC transporter-associated permease K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_00796 conserved protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_00918 membrane-spanning protein K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_p54 putative ABC transporter-associated permease K02004 ABC.CD.P; putative ABC transport system permease protein D CTC_00485 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_00394 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_01419 transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_01821 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_01916 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_02098 transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_p15 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_p52 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_00920 transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CTC_00756 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D CTC_02161 putative Na(+)/H(+) antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 D CTC_01799 Na+ driven multidrug efflux pump K26939 norM; MATE family, multidrug efflux pump D CTC_02405 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CTC_00443 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CTC_01362 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CTC_00419 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CTC_00603 mviN; Na+ driven multidrug efflux pump (mviN domain) K26937 dinF; MATE family, multidrug efflux pump D CTC_01173 transporter, MFS superfamily K26602 yihN; MFS transporter, GlpU family, inner membrane protein D CTC_01771 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CTC_00278 PTS system, glucose-specific IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CTC_01760 hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CTC_01996 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D CTC_00923 putative formate transporter K21993 fdhC; formate transporter D CTC_02487 nitrite transporter K02598 nirC; nitrite transporter D CTC_00429 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D CTC_00481 putative mechanosensitive ion-channel K03442 mscS; small conductance mechanosensitive channel D CTC_00107 aefA; aefA protein K22044 ybiO; moderate conductance mechanosensitive channel D CTC_01350 mgtE; Mg2+ transporter mgtE K06213 mgtE; magnesium transporter D CTC_01666 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D CTC_01665 motB; chemotaxis motB protein K02557 motB; chemotaxis protein MotB D CTC_00462 putative S-layer protein/N-acetylmuramoyl-L-alanine amidase K21449 ata; trimeric autotransporter adhesin D CTC_00777 putative surface/cell-adhesion protein K21449 ata; trimeric autotransporter adhesin D CTC_01825 conserved protein, putative murein hydrolase exporter K06518 cidA; holin-like protein D CTC_00286 spore germination protein A2 K06289 gerAB; spore germination protein AB D CTC_02094 spore germination protein KB K06296 gerKB; spore germination protein KB D CTC_01778 spore germination protein KB K06296 gerKB; spore germination protein KB D CTC_00304 zinc uptake transporter K07238 TC.ZIP; zinc transporter, ZIP family D CTC_01320 gufA; gufA protein K07238 TC.ZIP; zinc transporter, ZIP family D CTC_00140 conserved membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CTC_02311 transport protein (putative Na+/H+ antiporter) K07084 yuiF; putative amino acid transporter D CTC_02310 transport protein (putative Na+/H+ antiporter) K07084 yuiF; putative amino acid transporter D CTC_00701 putative gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CTC_00972 L-lactate permease K03303 lutP; lactate permease D CTC_02239 putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter D CTC_02306 sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family D CTC_02324 sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family D CTC_00901 nhaC; Na+/H+ antiporter nhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D CTC_01853 Na(+)/H(+) antiporter K11105 cvrA; potassium/hydrogen antiporter D CTC_01183 Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter D CTC_00235 trkH; potassium uptake protein trkH K03498 trkH; trk/ktr system potassium uptake protein D CTC_02281 potassium transport protein K03498 trkH; trk/ktr system potassium uptake protein D CTC_00236 trkA; potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein D CTC_02280 trkA; trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein D CTC_01612 uracil permease K02824 uraA; uracil permease D CTC_00434 xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CTC_01973 guanine-hypoxanthine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CTC_02001 chloride channel protein K03281 clcA; chloride channel protein, CIC family D CTC_00660 chromate transport protein K07240 chrA; chromate transporter D CTC_00661 chromate transport protein K07240 chrA; chromate transporter D CTC_01424 low affinity sulphate transporter 3 K03321 TC.SULP; sulfate permease, SulP family D CTC_00877 sodium-dependent phosphate transport protein K03324 yjbB; phosphate:Na+ symporter D CTC_01894 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CTC_01341 sodium/proton antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D CTC_01340 sodium/proton antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CTC_01339 shaD; sodium/proton antiporter shaD K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CTC_01338 shaA; sodium/proton antiporter shaA K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CTC_01342 shaE; sodium/proton antiporter shaE K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CTC_00197 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D CTC_00988 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D CTC_00987 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D CTC_02255 mviN; virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase D CTC_02261 mviN; virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase D CTC_00331 riboflavin transporter K23675 fmnP; riboflavin transporter D CTC_00254 conserved membrane protein K16789 thiT; thiamine transporter D CTC_01003 conserved protein K16788 niaX; niacin transporter D CTC_01629 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D CTC_00526 integral membrane protein K23242 mntP; manganese efflux pump family protein D CTC_00383 vacuolar-type H+-pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D CTC_00145 ccdA; cytochrome c-type biogenesis protein ccdA K06196 ccdA; cytochrome c-type biogenesis protein D CTC_01207 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D CTC_00968 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D CTC_00451 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D CTC_00843 putative Mg2+ transport protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:ctc02044] D CTC_02411 pilD; type IV prepilin leader peptidase pilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CTC_01601 conserved protein K02650 pilA; type IV pilus assembly protein PilA D CTC_01604 general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB D CTC_01603 pilC; putative general secretion pathway protein F K02653 pilC; type IV pilus assembly protein PilC D CTC_01119 pilT; pili retraction protein pilT K02669 pilT; twitching motility protein PilT D CTC_02050 come operon protein 1 K02237 comEA; competence protein ComEA D CTC_00309 come operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CTC_00821 come-like protein, metallo beta-lactamase superfamily hydrolase K02238 comEC; competence protein ComEC D CTC_00550 comE; comE operon protein K02238 comEC; competence protein ComEC D CTC_01364 hypothetical membrane spanning protein K02238 comEC; competence protein ComEC D CTC_01437 conserved protein K02238 comEC; competence protein ComEC D CTC_02042 comE; putative integral membrane protein comE K02238 comEC; competence protein ComEC D CTC_00324 competence protein F K02242 comFC; competence protein ComFC D CTC_01657 flhA; flagellar biosynthetic protein flhA K02400 flhA; flagellar biosynthesis protein FlhA D CTC_01676 fliF; flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF D CTC_01674 fliH; putative fliH protein K02411 fliH; flagellar assembly protein FliH D CTC_01673 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTC_01726 fliN; flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN D CTC_01663 putative flagellar formation protein K02418 fliO; flagellar protein FliO/FliZ D CTC_01662 fliP; flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP D CTC_01660 fliR; flagellar biosynthetic protein fliR/B K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D CTC_00327 secA; protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTC_02205 secD; protein translocase subunit secD K03072 secD; preprotein translocase subunit SecD D CTC_02203 secF; protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D CTC_02584 secY; protein translocase subunit secY K03076 secY; preprotein translocase subunit SecY D CTC_01249 signal recognition particle, subunit ffh/srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTC_01246 ftsY; signal recognition particle receptor ftsY K03110 ftsY; fused signal recognition particle receptor D CTC_02208 yajC; protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D CTC_00096 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:ctc02042] D CTC_p60 tetX; tetanus toxin tetX K08644 tetX; tentoxilysin [EC:3.4.24.68] D CTC_01888 tetanolysin O K11031 slo; thiol-activated cytolysin D CTC_00586 hemolysin III K11068 hlyIII; hemolysin III D CTC_00990 conserved protein, phospholipase C related K01114 plc; phospholipase C [EC:3.1.4.3] D CTC_p33 colT; collagenase ColT K01387 colA; microbial collagenase [EC:3.4.24.3] C 02022 Two-component system [BR:ctc02022] D CTC_01131 phoR; phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CTC_01130 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CTC_00411 phoP; alkaline phosphatase synthesis transcriptional regulatory protein phoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CTC_00189 transcriptional regulatory protein K07775 resD; two-component system, OmpR family, response regulator ResD D CTC_00805 two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR D CTC_00629 spaK; subtilin biosynthesis sensor protein spaK K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CTC_00598 two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CTC_00628 spaR; subtilin biosynthesis regulatory protein spaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D CTC_01482 transcriptional activator protein K02483 K02483; two-component system, OmpR family, response regulator D CTC_01906 transcriptional regulatory protein K02483 K02483; two-component system, OmpR family, response regulator D CTC_01569 stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D CTC_01524 dpiB; sensor kinase dpiB K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D CTC_01523 transcriptional regulatory protein K02475 K02475; two-component system, CitB family, response regulator D CTC_01978 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CTC_00934 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CTC_01979 transcriptional regulatory protein K02477 K02477; two-component system, LytTR family, response regulator D CTC_02322 transcriptional response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CTC_01731 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CTC_01729 cheY; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CTC_01733 protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CTC_01848 yesM; two-component sensor kinase yesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CTC_01849 transcriptional regulatory protein K07720 yesN; two-component system, response regulator YesN D CTC_00935 transcriptional regulatory protein K07720 yesN; two-component system, response regulator YesN D CTC_02178 ethanolamine utilization sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D CTC_02179 ethanolamine utilization response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:ctc02035] D CTC_01731 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CTC_01728 cheW; putative chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D CTC_01735 cheW; chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D CTC_01730 cheC; chemotaxis protein cheC K03410 cheC; chemotaxis protein CheC D CTC_01734 cheD; chemotaxis protein cheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D CTC_01732 cheR; chemotaxis protein methyltransferase cheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CTC_01733 protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CTC_01729 cheY; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CTC_01211 tlpA; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein D CTC_01507 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00924 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01536 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01512 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01881 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01857 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01839 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00888 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01308 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00474 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00942 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_00952 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CTC_01674 fliH; putative fliH protein K02411 fliH; flagellar assembly protein FliH D CTC_01673 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTC_01672 fliJ; flagellar protein fliJ K02413 fliJ; flagellar protein FliJ D CTC_01663 putative flagellar formation protein K02418 fliO; flagellar protein FliO/FliZ D CTC_01662 fliP; flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP D CTC_01660 fliR; flagellar biosynthetic protein fliR/B K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D CTC_01657 flhA; flagellar biosynthetic protein flhA K02400 flhA; flagellar biosynthesis protein FlhA D CTC_01675 fliG; flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG D CTC_01727 fliM; flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM D CTC_01726 fliN; flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN D CTC_01676 fliF; flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF D CTC_01664 fliL; putative flagellar protein fliL K02415 fliL; flagellar protein FliL D CTC_01671 putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D CTC_01678 flgB; flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB D CTC_01677 flgC; flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC D CTC_01669 flgD; putative basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CTC_01651 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D CTC_01650 flgG; flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG D CTC_01667 flgE; flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE D CTC_01724 flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1 D CTC_01722 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D CTC_01679 flagellin K02406 fliC; flagellin D CTC_01691 flagellin K02406 fliC; flagellin D CTC_01715 flagellin K02406 fliC; flagellin D CTC_01718 fliD; flagellar cap protein fliD K02407 fliD; flagellar hook-associated protein 2 D CTC_01719 fliS; flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS D CTC_01653 fliA; RNA polymerase sigma factor for flagellar operon fliA K02405 fliA; RNA polymerase sigma factor FliA D CTC_01666 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D CTC_01665 motB; chemotaxis motB protein K02557 motB; chemotaxis protein MotB D CTC_01721 conserved protein K13626 fliW; flagellar assembly factor FliW D CTC_01720 flagellin K06603 flaG; flagellar protein FlaG D CTC_01656 flhF; flagellar biosynthesis protein flhF K02404 flhF; flagellar biosynthesis protein FlhF D CTC_01655 fleN; flagellar synthesis regulator fleN K04562 flhG; flagellar biosynthesis protein FlhG D CTC_01119 pilT; pili retraction protein pilT K02669 pilT; twitching motility protein PilT D CTC_01601 conserved protein K02650 pilA; type IV pilus assembly protein PilA D CTC_01604 general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB D CTC_01603 pilC; putative general secretion pathway protein F K02653 pilC; type IV pilus assembly protein PilC D CTC_02411 pilD; type IV prepilin leader peptidase pilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] C 03037 Cilium and associated proteins [BR:ctc03037] D CTC_02161 putative Na(+)/H(+) antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 C 04812 Cytoskeleton proteins [BR:ctc04812] D CTC_02074 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTC_00318 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTC_p13 hypothetical protein K18640 parM; plasmid segregation protein ParM D CTC_01124 ftsZ; cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ D CTC_01122 ftsA; cell division protein ftsA K03590 ftsA; cell division protein FtsA D CTC_02070 minC; septum site-determining protein minC K03610 minC; septum site-determining protein MinC D CTC_02069 minD; septum site-determining protein minD K03609 minD; septum site-determining protein MinD D CTC_00102 parA; chromosome partitioning protein parA K03496 parA; chromosome partitioning protein D CTC_01937 sporulation initiation inhibitor soj family protein K03496 parA; chromosome partitioning protein D CTC_00103 parB; chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_01930 parB; chromosome partitioning parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_01936 parB; chromosome partitioning parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTC_00101 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ctc04147] D CTC_01489 htpG; heat shock protein htpG K04079 HSP90A; molecular chaperone HtpG D CTC_00382 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTC_00378 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTC_00379 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTC_02489 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTC_00571 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CTC_00894 putative peroxiredoxin, alkyl hydroperoxide reductase C22 protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CTC_02413 groE; 60 kDa chaperonin groEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTC_02031 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D CTC_02404 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTC_02410 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CTC_02602 protein translation elongation factor TU K02358 tuf; elongation factor Tu D CTC_02616 protein translation elongation factor TU K02358 tuf; elongation factor Tu D CTC_02026 Hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CTC_01998 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CTC_00312 acetyl-coA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CTC_02583 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CTC_02200 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CTC_00562 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CTC_00561 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CTC_01781 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CTC_00865 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CTC_01758 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CTC_02462 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CTC_00171 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CTC_00729 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CTC_00659 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CTC_00694 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CTC_01962 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CTC_02047 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTC_02082 electron transfer flavoprotein alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D CTC_02424 electron transfer flavoprotein alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D CTC_01864 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTC_00380 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:ctc02048] D CTC_01148 maturase-related protein K15342 cas1; CRISP-associated protein Cas1 D CTC_01463 conserved protein, possibly maturase-related K15342 cas1; CRISP-associated protein Cas1 D CTC_01465 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D CTC_01146 ATP-dependent RNA helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D CTC_01143 conserved protein K19088 cst1; CRISPR-associated protein Cst1 D CTC_01144 conserved protein K19075 cst2; CRISPR-associated protein Cst2 D CTC_01147 conserved protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CTC_01464 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CTC_01145 conserved protein K19090 cas5t; CRISPR-associated protein Cas5t D CTC_01469 conserved protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D CTC_01142 conserved protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D CTC_01468 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1 D CTC_01467 hypothetical protein K19115 csh2; CRISPR-associated protein Csh2 D CTC_01466 hypothetical protein K19116 cas5h; CRISPR-associated protein Cas5h D CTC_00387 putative adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CTC_02250 bstV; modification methylase bstVI K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CTC_02134 phage-related protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D CTC_01933 death on curing protein K07341 doc; death on curing protein D CTC_01124 ftsZ; cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ D CTC_02074 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTC_00318 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTC_01766 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CTC_01767 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CTC_00977 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTC_01459 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTC_01050 cysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:ctc04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:ctc04090] C 01504 Antimicrobial resistance genes [BR:ctc01504] D CTC_01425 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D CTC_00805 two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ctc00537] D CTC_00659 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CTC_00571 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ctc03100] D CTC_0t08 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTC_0t27 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTC_0t52 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTC_0t45 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTC_0t04 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTC_0t37 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTC_0t05 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTC_0t19 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTC_0t29 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTC_0t50 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTC_0t12 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CTC_0t21 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CTC_0t34 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CTC_0t26 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTC_0t42 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTC_0t10 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTC_0t30 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTC_0t35 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTC_0t39 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTC_0t38 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTC_0t46 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTC_0t43 tRNA-His K14226 tRNA-His; tRNA His D CTC_0t28 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTC_0t54 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTC_0t51 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTC_0t14 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t33 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t40 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTC_0t44 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTC_0t01 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTC_0t41 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTC_0t16 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t15 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t18 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t09 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t53 tRNA-Met K14230 tRNA-Met; tRNA Met D CTC_0t20 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CTC_0t36 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CTC_0t47 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTC_0t31 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTC_0t06 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTC_0t07 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTC_0t03 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTC_0t02 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTC_0t13 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTC_0t22 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTC_0t24 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTC_0t49 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTC_0t48 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CTC_0t23 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CTC_0t25 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CTC_0t11 tRNA-Val K14237 tRNA-Val; tRNA Val D CTC_0r03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r15 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r18 5S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTC_0r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTC_0r01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r13 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTC_0r16 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CTC_00375 N5-(carboxyethyl)ornithine synthase K00298 ceo; N5-(carboxyethyl)ornithine synthase [EC:1.5.1.24] D CTC_01004 flavodoxin K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D CTC_00149 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CTC_00797 putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CTC_02454 desulfoferrodoxin-like protein K05919 dfx; superoxide reductase [EC:1.15.1.2] D CTC_00138 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D CTC_02421 dihydroorotate dehydrogenase electron transfer subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CTC_00258 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D CTC_00937 pyruvate formate-lyase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CTC_01166 pyruvate formate-lyase 1 activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CTC_01448 benzylsuccinate synthase activating enzyme K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-] D CTC_01337 shaA; sodium/proton antiporter shaA K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D CTC_01889 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CTC_00420 methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D CTC_00916 putative maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CTC_00643 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D CTC_00251 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CTC_01027 apbE; thiamine biosynthesis lipoprotein apbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CTC_01829 apbE; putative thiamine biosynthesis lipoprotein apbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CTC_01230 degV; degV protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CTC_00122 ATP/GTP-binding protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D CTC_01911 reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CTC_02629 putative DNA-binding protein K07067 disA; diadenylate cyclase [EC:2.7.7.85] D CTC_02549 conserved protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CTC_02247 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D CTC_01010 serine kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D CTC_02634 arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D CTC_02087 putative bile acid-inducible operon protein F K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D CTC_01399 conserved protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D CTC_00206 dihydrolipoamide acyltransferase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D CTC_00201 stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D CTC_00111 MGPA protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D CTC_02023 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D CTC_00244 tatD; deoxyribonuclease tatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CTC_00246 DNA primase K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D CTC_01180 spore peptidoglycan hydrolase (N-acetylglucosaminidase) K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-] D CTC_p55 putative N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTC_01219 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CTC_02251 chitooligosaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D CTC_00233 translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CTC_00361 moxR; methanol dehydrogenase regulatory protein (moxR) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CTC_00762 moxR; regulatory protein moxR K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CTC_00306 phosphotyrosine protein phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D CTC_01174 conserved protein K23248 oiaC; 3-oxoisoapionate decarboxylase [EC:4.1.1.120] D CTC_00900 spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D CTC_01855 67 kDa myosin-crossreactive streptococcal antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53] D CTC_02515 conserved protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CTC_00071 threonine dehydratase biosynthetic K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D CTC_01449 formate acetyltransferase 2 K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4] D CTC_00903 hypothetical protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D CTC_00282 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D CTC_00135 acetyl-coA carboxylase carboxyl transferase subunit beta/alpha K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D CTC_01020 rnfD; rnfD/nqrB K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D CTC_01019 rnfC; rnfC/nqrF K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D CTC_01024 rnfB; rnfB/polyferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D CTC_02043 putative calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D CTC_01647 calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D CTC_00664 putative calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D CTC_01955 Zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D CTC_00070 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D CTC_01021 rnfG; rnfG/nqrC K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D CTC_00675 electron transport complex protein (RnfG/NqrC) K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D CTC_01022 rnfE; rnfE/nqrD K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D CTC_01023 rnfA; rnfA/nqrE K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D CTC_01051 nifU; nifU protein K04488 iscU; nitrogen fixation protein NifU and related proteins D CTC_01843 flavoprotein K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D CTC_01480 napH; conserved protein, putative ferredoxin-type protein napH K02574 napH; ferredoxin-type protein NapH D CTC_00711 fixA; electron transfer flavoprotein beta subunit fixA K03521 fixA; electron transfer flavoprotein beta subunit D CTC_02425 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D CTC_00368 degV; degV protein K25232 fakB; fatty acid kinase fatty acid binding subunit D CTC_00884 degV; degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D CTC_02164 ethanolamine permease K04023 eutH; ethanolamine transporter D CTC_00847 ethanolamine utilization protein K04023 eutH; ethanolamine transporter D CTC_01444 eutJ; ethanolamine utilization protein eutJ K04024 eutJ; ethanolamine utilization protein EutJ D CTC_02168 eutJ; ethanolamine utilization protein eutJ K04024 eutJ; ethanolamine utilization protein EutJ D CTC_02174 eutL; ethanolamine utilization protein eutL K04026 eutL; ethanolamine utilization protein EutL D CTC_02180 eutP; ethanolamine utilization protein eutP K04029 eutP; ethanolamine utilization protein EutP D CTC_01446 lysine-sensitive aspartokinase III K04029 eutP; ethanolamine utilization protein EutP D CTC_01443 transcriptional regulator K04030 eutQ; ethanolamine utilization protein EutQ D CTC_02163 ethanolamine utilization protein (transcriptional regulator) K04030 eutQ; ethanolamine utilization protein EutQ D CTC_02181 eutS; ethanolamine utilization protein eutS K04031 eutS; ethanolamine utilization protein EutS D CTC_01447 eutS; ethanolamine utilization protein eutS K04031 eutS; ethanolamine utilization protein EutS D CTC_02185 putative lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein D CTC_01624 proline synthetase associated protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CTC_02551 spore-cortex-lytic enzyme K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D CTC_01323 aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein D CTC_00584 mtrF; putative efflux pump component mtrF K12942 abgT; aminobenzoyl-glutamate transport protein D CTC_02316 aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D CTC_02149 phage-related protein K07741 antB; anti-repressor protein D CTC_01071 kilA; kilA protein, putative phage-related DNA binding protein K07741 antB; anti-repressor protein D CTC_00330 transcription accessory protein K06959 tex; protein Tex C 99974 Translation D CTC_00200 ribosomal protein K07571 K07571; S1 RNA binding domain protein D CTC_00978 cleavage and polyadenylation specificity factor K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D CTC_02635 clpC; putative clpC ATPase K19411 mcsA; protein arginine kinase activator D CTC_02376 trigger factor K03545 tig; trigger factor D CTC_00385 SsrA-binding protein K03664 smpB; SsrA-binding protein D CTC_01257 Mg(2+) chelatase family protein K07391 comM; magnesium chelatase family protein D CTC_01880 alcohol dehydrogenase [cytochrome c-553], gamma chain-like protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D CTC_02153 ribonuclease HI K06993 K06993; ribonuclease H-related protein D CTC_02075 radC; DNA repair protein radC K03630 radC; DNA repair protein RadC D CTC_01256 endonuclease K07460 yraN; putative endonuclease D CTC_01258 SMF protein, putative DNA processing chain A K04096 smf; DNA processing protein D CTC_01085 phage terminase small subunit K07474 xtmA; phage terminase small subunit D CTC_01048 ATPase associated with chromosome architecture/replication K07478 ycaJ; putative ATPase D CTC_00389 transposase K18320 IS15; transposase, IS6 family D CTC_00450 transposase K07483 K07483; transposase D CTC_00517 transposase K07483 K07483; transposase D CTC_00224 transposase K07483 K07483; transposase D CTC_00136 tranposase-like K07483 K07483; transposase D CTC_00175 transposase K07483 K07483; transposase D CTC_01989 transposase-related protein K07483 K07483; transposase D CTC_01407 hypothetical protein K07483 K07483; transposase D CTC_00789 transposase K07483 K07483; transposase D CTC_00829 transposase K07483 K07483; transposase D CTC_p18 transposase-related protein K07491 rayT; REP-associated tyrosine transposase D CTC_p40 transposase-related protein K07491 rayT; REP-associated tyrosine transposase D CTC_00496 conserved protein K07491 rayT; REP-associated tyrosine transposase D CTC_00621 transposase K07491 rayT; REP-associated tyrosine transposase D CTC_01206 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D CTC_01158 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D CTC_01694 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D CTC_00363 transposase K07496 K07496; putative transposase D CTC_01809 transposase K07496 K07496; putative transposase D CTC_01878 transposase K07496 K07496; putative transposase D CTC_00623 transposase K07496 K07496; putative transposase D CTC_p39 transposase K07496 K07496; putative transposase D CTC_p17 transposase K07496 K07496; putative transposase D CTC_00449 transposase K07497 K07497; putative transposase D CTC_00516 transposase K07497 K07497; putative transposase D CTC_00223 transposase K07497 K07497; putative transposase D CTC_00137 transposase K07497 K07497; putative transposase D CTC_00176 transposase K07497 K07497; putative transposase D CTC_01990 putative transposase K07497 K07497; putative transposase D CTC_01141 transposase K07497 K07497; putative transposase D CTC_01406 putative transposase K07497 K07497; putative transposase D CTC_00788 transposase K07497 K07497; putative transposase D CTC_00830 transposase K07497 K07497; putative transposase D CTC_01934 putative transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CTC_00074 transcriptional regulatory protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CTC_00932 rocC; putative amino acid permease rocC K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D CTC_00514 putative sodium/myo-inositol cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CTC_00928 sodium/pantothenate symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CTC_01508 putative sodium- and chloride- dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CTC_00819 sodium- and chloride-dependent transporter, putative tyrosine transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CTC_01190 sodium-dependent amino acid transporter (proline, tryptophan) K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CTC_01947 sodium dependent amino acid transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CTC_00564 Na+-linked D-alanine/glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTC_01187 alsT; amino acid carrier protein alsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTC_01975 Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTC_01172 Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTC_01868 branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CTC_00787 branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CTC_02192 branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CTC_02088 branched chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CTC_01390 nupC; nucleoside permease nupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D CTC_01874 hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D CTC_00870 spore coat protein K06334 cotJC; spore coat protein JC D CTC_00097 conserved protein, JAG-family K06346 jag; spoIIIJ-associated protein D CTC_00238 spore maturation protein A K06373 spmA; spore maturation protein A D CTC_00239 spore maturation protein B K06374 spmB; spore maturation protein B D CTC_02248 anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D CTC_01533 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M D CTC_02038 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D CTC_02037 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D CTC_00288 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D CTC_01589 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D CTC_01588 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB D CTC_01586 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE D CTC_01585 stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF D CTC_01584 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG D CTC_01583 stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH D CTC_01140 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D CTC_02152 DNA integration/recombination protein K06400 spoIVCA; site-specific DNA recombinase D CTC_01067 site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase D CTC_02245 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D CTC_02244 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D CTC_02243 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D CTC_01041 stage V sporulation protein R K06415 spoVR; stage V sporulation protein R D CTC_01710 spsF; spore coat polysaccharide biosynthesis protein spsF K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D CTC_00279 conserved protein K06436 yabG; spore coat assemly protein D CTC_02024 putative stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein D CTC_01776 spore germination protein KA K06295 gerKA; spore germination protein KA D CTC_02096 spore germination protein KA K06295 gerKA; spore germination protein KA D CTC_02448 spore germination protein KA K06295 gerKA; spore germination protein KA D CTC_01777 spore germination protein KC K06297 gerKC; spore germination protein KC D CTC_02095 spore germination protein KC K06297 gerKC; spore germination protein KC D CTC_02447 spore germination protein B3/KC K06297 gerKC; spore germination protein KC D CTC_00285 spore germination protein B1 K06310 yndD; spore germination protein D CTC_00287 spore germination protein A3 K06312 yndF; spore germination protein D CTC_00290 conserved membrane-associated protein K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D CTC_02234 terD; tellurium resistance protein terD K05795 terD; tellurium resistance protein TerD D CTC_02233 general stress protein K05795 terD; tellurium resistance protein TerD D CTC_02228 general stress protein K05795 terD; tellurium resistance protein TerD D CTC_01060 lepA; GTP-binding protein lepA K06207 typA; GTP-binding protein D CTC_01039 prkA; prkA protein K07180 prkA; serine protein kinase C 99992 Structural proteins D CTC_00484 conserved membrane-associated protein K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D CTC_02359 dcrH; hemerythrin-like domain protein dcrH K07216 hr; hemerythrin B B 09194 Poorly characterized C 99996 General function prediction only D CTC_01168 acetyltransferase K02348 elaA; ElaA protein D CTC_02536 putative DNA polymerase beta K04477 ycdX; putative hydrolase D CTC_02498 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D CTC_02522 ribonuclease BN K07058 K07058; membrane protein D CTC_00358 lemA; lemA-like protein K03744 lemA; LemA protein D CTC_00492 phage infection protein K01421 yhgE; putative membrane protein D CTC_01237 putative sodium-glucose/galactose cotransporter K08984 yjdF; putative membrane protein D CTC_00938 membrane-spanning protein K08986 ycgQ; putative membrane protein C 99997 Function unknown D CTC_02206 transcriptional regulatory protein K06871 K06871; uncharacterized protein D CTC_00359 conserved protein K06872 K06872; uncharacterized protein D CTC_00965 thymidylate kinase K06888 K06888; uncharacterized protein D CTC_00121 conserved protein K06929 K06929; uncharacterized protein D CTC_01373 DNA-binding protein K06933 K06933; uncharacterized protein D CTC_01209 hypothetical protein K06934 K06934; uncharacterized protein D CTC_02003 hypothetical protein K06940 K06940; uncharacterized protein D CTC_02618 tetracycline resistance protein K06962 K06962; uncharacterized protein D CTC_01221 conserved protein K06973 K06973; uncharacterized protein D CTC_00899 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein D CTC_00757 conserved protein K07033 K07033; uncharacterized protein D CTC_01841 PTS system, fructose-specific IIBC component K07035 K07035; uncharacterized protein D CTC_00939 transporter K07089 K07089; uncharacterized protein D CTC_01944 transporter K07090 K07090; uncharacterized protein D CTC_02354 putative phosphoesterase K07095 K07095; uncharacterized protein D CTC_01815 putative phosphoesterase K07095 K07095; uncharacterized protein D CTC_02387 putative phosphoesterase K07095 K07095; uncharacterized protein D CTC_01157 phosphoesterase K07098 K07098; uncharacterized protein D CTC_00334 putative phosphohydrolase K07099 K07099; uncharacterized protein D CTC_00087 transcriptional regulator K07105 K07105; uncharacterized protein D CTC_01179 transporter K07112 K07112; uncharacterized protein D CTC_00400 putative transporter K07112 K07112; uncharacterized protein D CTC_01176 membrane spanning protein K07112 K07112; uncharacterized protein D CTC_00398 conserved membrane protein K07112 K07112; uncharacterized protein D CTC_00397 putative permease protein K07112 K07112; uncharacterized protein D CTC_01175 transporter K07112 K07112; uncharacterized protein D CTC_02535 hetN; ketoacyl reductase hetN K07124 K07124; uncharacterized protein D CTC_01907 conserved protein K07129 K07129; uncharacterized protein D CTC_00118 NAD(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein D CTC_02547 NAD(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein D CTC_00179 Fe-S oxidoreductase K07139 K07139; uncharacterized protein D CTC_02482 transporter K07150 K07150; uncharacterized protein D CTC_02006 hypothetical protein K07164 K07164; uncharacterized protein D CTC_02025 conserved cytosolic protein K09117 K09117; uncharacterized protein D CTC_00086 conserved membrane protein K09118 K09118; uncharacterized protein D CTC_01351 conserved protein K09126 K09126; uncharacterized protein D CTC_01873 conserved protein K09155 K09155; uncharacterized protein D CTC_01034 glycerol-3-phosphate dehydrogenase (NAD(P)+) K09157 K09157; uncharacterized protein D CTC_00912 conserved protein K09163 K09163; uncharacterized protein D CTC_01736 conserved protein K09749 K09749; uncharacterized protein D CTC_00335 conserved protein K09766 K09766; uncharacterized protein D CTC_02403 emg2 protein K09768 K09768; uncharacterized protein D CTC_00667 conserved protein K09770 K09770; uncharacterized protein D CTC_01040 conserved protein K09786 K09786; uncharacterized protein D CTC_01247 signal recognition particle associated protein K09787 K09787; uncharacterized protein D CTC_01814 periplasmic immunogenic protein K09807 K09807; uncharacterized protein D CTC_00652 S1 RNA binding domain K00243 K00243; uncharacterized protein D CTC_00834 conserved protein K09975 K09975; uncharacterized protein D CTC_00813 conserved protein K01163 K01163; uncharacterized protein D CTC_00967 conserved protein K07502 yprB; uncharacterized protein D CTC_02059 hypothetical protein K07584 ysxB; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 27, 2024