+D GENES KO #

  KEGG Orthology (KO) - Acetivibrio thermocellus DSM 1313

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ctx00010] D Clo1313_0489 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Clo1313_2015 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clo1313_0997 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clo1313_1876 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clo1313_1875 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clo1313_2093 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clo1313_2095 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clo1313_2094 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clo1313_0813 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clo1313_2092 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_2745 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_0966 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_2090 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clo1313_0949 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clo1313_1005 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Clo1313_0022 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0384 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0023 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0385 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0020 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0382 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0383 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0021 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0673 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clo1313_1354 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clo1313_1355 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clo1313_1878 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_1160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_1798 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clo1313_1686 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Clo1313_0993 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clo1313_0415 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:ctx00020] D Clo1313_0578 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Clo1313_0708 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Clo1313_0709 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Clo1313_1944 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Clo1313_1354 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clo1313_1355 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clo1313_1356 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clo1313_1353 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clo1313_0640 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Clo1313_0641 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Clo1313_0415 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Clo1313_0022 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0384 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0023 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0385 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0020 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0382 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0383 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0021 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0673 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:ctx00030] D Clo1313_2015 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clo1313_1661 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clo1313_0074 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clo1313_0075 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clo1313_0296 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clo1313_0295 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clo1313_0184 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clo1313_2615 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Clo1313_2349 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Clo1313_1546 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Clo1313_0993 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clo1313_0218 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clo1313_1875 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clo1313_0997 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clo1313_1876 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:ctx00040] D Clo1313_0500 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Clo1313_2843 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Clo1313_0501 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Clo1313_0901 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clo1313_2847 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clo1313_1661 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clo1313_0076 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Clo1313_1833 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Clo1313_1907 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:ctx00051] D Clo1313_1398 coagulation factor 5/8 type domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Clo1313_0399 Dockerin type 1 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Clo1313_2202 Dockerin type 1 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Clo1313_1832 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Clo1313_0669 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clo1313_2633 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Clo1313_1134 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Clo1313_0666 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clo1313_1907 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Clo1313_0997 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clo1313_1876 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clo1313_0076 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Clo1313_1833 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Clo1313_1875 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clo1313_2093 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clo1313_0184 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:ctx00052] D Clo1313_2047 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_2893 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_0144 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_2847 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clo1313_0993 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clo1313_0489 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Clo1313_2861 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clo1313_2627 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144] D Clo1313_0997 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clo1313_1876 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:ctx00053] D Clo1313_0901 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clo1313_1999 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Clo1313_0892 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:ctx00500] D Clo1313_2847 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clo1313_1002 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clo1313_2020 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Clo1313_0820 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Clo1313_2189 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1396 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1603 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1477 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1659 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2192 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_3023 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1604 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1808 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1809 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1425 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0413 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1694 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2234 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0395 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1816 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2805 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1701 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1788 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1955 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2233 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0349 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0350 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0400 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2856 Carbohydrate binding family 6 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1954 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Clo1313_0539 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Clo1313_0148 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Clo1313_0717 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clo1313_0718 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clo1313_0974 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Clo1313_1947 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Clo1313_2854 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Clo1313_1867 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Clo1313_1426 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Clo1313_2460 glycoside hydrolase 15-related protein K01178 SGA1; glucoamylase [EC:3.2.1.3] D Clo1313_0993 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clo1313_0489 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Clo1313_2015 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clo1313_1832 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ctx00520] D Clo1313_1959 glycoside hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D Clo1313_1904 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Clo1313_2853 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Clo1313_1832 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Clo1313_1099 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clo1313_1098 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Clo1313_0217 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Clo1313_0202 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clo1313_2989 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clo1313_2119 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clo1313_0188 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clo1313_3003 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Clo1313_2895 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Clo1313_2902 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D Clo1313_0229 UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184] D Clo1313_0230 N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D Clo1313_0228 acylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D Clo1313_0133 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Clo1313_0987 Carbohydrate binding family 6 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Clo1313_2860 glycoside hydrolase family 43 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Clo1313_0489 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Clo1313_0993 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clo1313_2847 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clo1313_0901 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clo1313_2047 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_2893 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_0144 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_1999 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Clo1313_0892 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Clo1313_2015 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clo1313_0669 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clo1313_2633 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Clo1313_1134 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Clo1313_0666 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clo1313_0233 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Clo1313_2894 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Clo1313_0148 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Clo1313_0147 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Clo1313_0145 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D Clo1313_0717 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clo1313_0718 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:ctx00620] D Clo1313_1686 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Clo1313_0022 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0384 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0023 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0385 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0020 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0382 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0383 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0021 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0673 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clo1313_1354 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clo1313_1355 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clo1313_1717 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Clo1313_1798 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clo1313_1186 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clo1313_1185 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clo1313_1878 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_1160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_0911 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Clo1313_2418 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Clo1313_1879 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Clo1313_1523 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Clo1313_1712 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clo1313_0640 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Clo1313_0641 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Clo1313_0415 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Clo1313_0949 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clo1313_1005 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Clo1313_0102 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Clo1313_0857 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ctx00630] D Clo1313_1686 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Clo1313_0578 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Clo1313_0709 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Clo1313_1068 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Clo1313_1968 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Clo1313_1357 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2031 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2038 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2303 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_1155 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clo1313_2359 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clo1313_0554 hydrogenase, Fe-only K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] C 00640 Propanoate metabolism [PATH:ctx00640] D Clo1313_1686 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Clo1313_1186 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clo1313_1185 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clo1313_0022 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0384 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0023 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0385 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0020 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0382 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0383 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0021 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_1717 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Clo1313_1878 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_1160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_2136 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:ctx00650] D Clo1313_1798 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clo1313_1712 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clo1313_1524 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clo1313_0968 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Clo1313_1717 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Clo1313_0022 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0384 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0023 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0385 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0020 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0382 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0383 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0021 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0673 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clo1313_1354 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clo1313_1355 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clo1313_0099 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clo1313_0305 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clo1313_0100 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ctx00660] D Clo1313_0099 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clo1313_0305 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clo1313_0100 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clo1313_2884 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Clo1313_2883 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Clo1313_2882 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ctx00562] D Clo1313_0742 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] D Clo1313_2093 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ctx00190] D Clo1313_1793 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Clo1313_1792 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Clo1313_1791 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Clo1313_1677 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Clo1313_0193 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Clo1313_0195 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Clo1313_0194 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Clo1313_0192 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Clo1313_0196 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Clo1313_0189 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Clo1313_0191 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Clo1313_0190 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Clo1313_2940 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Clo1313_2941 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Clo1313_2938 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Clo1313_2942 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Clo1313_2937 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Clo1313_2939 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Clo1313_2934 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Clo1313_2935 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Clo1313_2936 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ctx00680] D Clo1313_0554 hydrogenase, Fe-only K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Clo1313_0390 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clo1313_2034 iron-sulfur cluster-binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Clo1313_1155 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clo1313_2090 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clo1313_1875 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clo1313_0997 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clo1313_1876 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clo1313_1186 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clo1313_1185 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clo1313_1686 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Clo1313_0022 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0384 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0023 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0385 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0020 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0382 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0383 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0021 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_1005 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Clo1313_0813 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clo1313_2092 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_2745 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_0966 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_0586 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clo1313_1931 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Clo1313_1517 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Clo1313_0372 cobalamin B12-binding domain protein K16179 mtbC; dimethylamine corrinoid protein C 00910 Nitrogen metabolism [PATH:ctx00910] D Clo1313_2331 oxidoreductase/nitrogenase component 1 K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clo1313_2332 oxidoreductase/nitrogenase component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clo1313_2339 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clo1313_2198 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Clo1313_1847 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Clo1313_1357 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2031 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2038 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2303 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_1849 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:ctx00920] D Clo1313_0114 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Clo1313_0115 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Clo1313_0116 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Clo1313_0117 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Clo1313_2336 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein D Clo1313_2337 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Clo1313_2338 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clo1313_0120 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clo1313_0119 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clo1313_1227 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Clo1313_0118 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Clo1313_0124 nitrite and sulphite reductase 4Fe-4S region K00385 asrC; anaerobic sulfite reductase subunit C D Clo1313_2724 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clo1313_2532 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clo1313_2326 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clo1313_2537 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Clo1313_0388 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ctx00061] D Clo1313_1284 acyl carrier protein K02078 acpP; acyl carrier protein D Clo1313_2101 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Clo1313_2900 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Clo1313_1282 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clo1313_1281 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clo1313_2100 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clo1313_2102 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clo1313_1285 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clo1313_1283 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clo1313_0213 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clo1313_0720 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Clo1313_1024 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_0677 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_2099 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ctx00071] D Clo1313_1024 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_0677 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_2099 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_1798 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ctx00561] D Clo1313_2359 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clo1313_0073 Carbohydrate kinase, FGGY-like protein K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clo1313_1280 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clo1313_1191 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clo1313_1511 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clo1313_3001 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Clo1313_0728 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clo1313_2059 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Clo1313_2170 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00564 Glycerophospholipid metabolism [PATH:ctx00564] D Clo1313_1192 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Clo1313_1191 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clo1313_1511 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clo1313_0742 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] D Clo1313_1215 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Clo1313_1276 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Clo1313_0853 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Clo1313_0999 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D Clo1313_0742 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism D Clo1313_2861 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ctx00230] D Clo1313_1549 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Clo1313_1546 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Clo1313_0993 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clo1313_0218 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clo1313_1009 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clo1313_1013 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Clo1313_1011 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Clo1313_1683 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Clo1313_2654 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Clo1313_0605 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Clo1313_1010 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Clo1313_1008 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Clo1313_0426 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Clo1313_1481 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Clo1313_1012 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clo1313_0908 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clo1313_1056 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clo1313_2341 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clo1313_1306 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Clo1313_2927 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Clo1313_1542 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clo1313_1508 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Clo1313_2044 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Clo1313_1846 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Clo1313_0098 CMP/dCMP deaminase zinc-binding protein K01487 guaD; guanine deaminase [EC:3.5.4.3] D Clo1313_0941 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Clo1313_2179 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Clo1313_1580 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clo1313_1321 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Clo1313_2798 metal-dependent phosphohydrolase HD sub domain K01129 dgt; dGTPase [EC:3.1.5.1] D Clo1313_3022 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Clo1313_0909 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Clo1313_0165 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Clo1313_0164 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Clo1313_0643 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Clo1313_1123 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Clo1313_0466 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Clo1313_0245 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Clo1313_0120 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clo1313_0119 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clo1313_2490 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Clo1313_2491 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Clo1313_2492 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:ctx00240] D Clo1313_1268 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clo1313_2560 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clo1313_1267 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clo1313_2559 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clo1313_1264 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Clo1313_1265 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Clo1313_1270 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Clo1313_1269 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Clo1313_1266 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Clo1313_1211 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Clo1313_1508 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Clo1313_0245 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Clo1313_2144 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Clo1313_2597 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Clo1313_1512 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Clo1313_1891 TGS domain-containing protein K00876 udk; uridine kinase [EC:2.7.1.48] D Clo1313_0185 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Clo1313_1262 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Clo1313_1123 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Clo1313_1545 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Clo1313_1145 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Clo1313_2348 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Clo1313_1580 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clo1313_2239 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Clo1313_2179 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Clo1313_3022 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Clo1313_0186 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Clo1313_2765 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Clo1313_2743 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Clo1313_1030 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ctx00250] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_3018 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Clo1313_2163 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Clo1313_1681 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Clo1313_2054 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clo1313_2055 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clo1313_0643 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Clo1313_1481 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Clo1313_1264 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Clo1313_1849 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Clo1313_1847 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Clo1313_1357 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2031 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2038 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2303 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_1268 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clo1313_2560 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clo1313_1267 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clo1313_2559 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clo1313_1099 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clo1313_1009 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ctx00260] D Clo1313_0873 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clo1313_1255 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clo1313_0872 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clo1313_1938 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clo1313_0867 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Clo1313_1155 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clo1313_2359 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clo1313_0813 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clo1313_2092 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_2745 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_0966 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clo1313_0586 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clo1313_1931 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Clo1313_1517 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Clo1313_2631 Methyltransferase type 11 K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156] D Clo1313_0837 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Clo1313_0836 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Clo1313_1046 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ctx00270] D Clo1313_2724 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clo1313_2532 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clo1313_2326 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clo1313_2325 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clo1313_0389 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clo1313_1581 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clo1313_2924 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clo1313_1509 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Clo1313_1530 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clo1313_1606 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Clo1313_1306 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Clo1313_1058 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Clo1313_1607 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Clo1313_1057 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Clo1313_0873 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clo1313_1255 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clo1313_0872 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clo1313_1938 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clo1313_2537 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Clo1313_0388 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Clo1313_2534 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clo1313_2335 Cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clo1313_1364 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1878 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_1160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_0586 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clo1313_1931 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ctx00280] D Clo1313_1364 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ctx00290] D Clo1313_2884 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Clo1313_2883 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Clo1313_2882 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Clo1313_0099 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clo1313_0305 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clo1313_0100 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clo1313_0101 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Clo1313_0304 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Clo1313_1364 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clo1313_0102 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Clo1313_0857 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ctx00300] D Clo1313_0872 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clo1313_1938 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clo1313_0873 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clo1313_1255 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clo1313_1254 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clo1313_1253 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Clo1313_1090 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Clo1313_2558 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clo1313_0651 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Clo1313_0652 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clo1313_1540 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Clo1313_1295 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D Clo1313_0154 hypothetical protein K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] D Clo1313_1240 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clo1313_1241 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:ctx00220] D Clo1313_2561 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Clo1313_2054 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clo1313_2055 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clo1313_2490 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Clo1313_2491 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Clo1313_2492 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Clo1313_1357 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2031 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2038 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2303 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_1847 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_2150 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Clo1313_2556 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Clo1313_2555 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Clo1313_2558 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clo1313_0154 hypothetical protein K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:ctx00330] D Clo1313_2592 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Clo1313_1529 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Clo1313_1530 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clo1313_1509 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clo1313_1551 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Clo1313_2439 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Clo1313_1967 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:ctx00340] D Clo1313_0422 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Clo1313_0421 histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Clo1313_0430 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Clo1313_0428 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Clo1313_0427 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Clo1313_0429 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Clo1313_0425 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Clo1313_0424 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_1619 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_1499 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Clo1313_0423 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Clo1313_0579 Pyridoxal-dependent decarboxylase K01590 hdc; histidine decarboxylase [EC:4.1.1.22] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:ctx00350] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_0424 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_1619 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_1798 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:ctx00360] D Clo1313_0380 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Clo1313_1614 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_0424 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_1619 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:ctx00380] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ctx00400] D Clo1313_1340 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Clo1313_2468 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Clo1313_1435 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Clo1313_1371 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Clo1313_0068 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Clo1313_1492 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Clo1313_0636 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Clo1313_2470 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Clo1313_1491 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Clo1313_1344 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clo1313_1345 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Clo1313_1346 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Clo1313_1348 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Clo1313_1347 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Clo1313_0837 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Clo1313_0836 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Clo1313_1046 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Clo1313_1513 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D Clo1313_0871 amino acid-binding ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D Clo1313_2469 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Clo1313_2933 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_0424 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_1619 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ctx00410] D Clo1313_1318 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clo1313_1317 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:ctx00430] D Clo1313_1185 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clo1313_1186 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:ctx00450] D Clo1313_0388 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Clo1313_2325 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clo1313_0389 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clo1313_1581 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clo1313_2617 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clo1313_2618 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clo1313_0120 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clo1313_0119 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clo1313_2754 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ctx00460] D Clo1313_1002 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clo1313_2020 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Clo1313_0820 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Clo1313_2163 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Clo1313_1155 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ctx00470] D Clo1313_0288 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clo1313_2609 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clo1313_0236 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clo1313_2608 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Clo1313_1172 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clo1313_0651 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Clo1313_1540 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:ctx00480] D Clo1313_0700 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Clo1313_1944 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Clo1313_1530 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:ctx00515] D Clo1313_0646 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:ctx00514] D Clo1313_0646 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:ctx00511] D Clo1313_2861 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:ctx00542] D Clo1313_0187 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ctx00541] D Clo1313_2847 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clo1313_2047 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_2893 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_0144 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clo1313_0901 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Clo1313_1999 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Clo1313_0892 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Clo1313_1127 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clo1313_0887 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clo1313_0146 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clo1313_0148 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Clo1313_0147 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Clo1313_0145 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D Clo1313_0669 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clo1313_0233 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Clo1313_2894 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Clo1313_0217 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Clo1313_0188 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clo1313_2895 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Clo1313_2902 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D Clo1313_3003 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:ctx00550] D Clo1313_0202 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clo1313_2989 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clo1313_2119 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clo1313_0214 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Clo1313_1172 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clo1313_1240 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clo1313_2609 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clo1313_0236 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clo1313_1241 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Clo1313_1214 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clo1313_2978 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clo1313_1242 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clo1313_1244 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clo1313_2433 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clo1313_1204 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clo1313_2140 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clo1313_1239 penicillin-binding protein transpeptidase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clo1313_0598 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Clo1313_1544 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_0730 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1957 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1025 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1089 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_2572 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clo1313_1780 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Clo1313_1781 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:ctx00552] D Clo1313_2978 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clo1313_0187 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clo1313_0292 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Clo1313_1496 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clo1313_0653 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clo1313_1359 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clo1313_0728 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clo1313_2059 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Clo1313_2170 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Clo1313_3001 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ctx00543] D Clo1313_0187 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clo1313_0667 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF D Clo1313_2724 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ctx00730] D Clo1313_1627 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Clo1313_1629 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Clo1313_1150 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_1503 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_1151 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clo1313_1571 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Clo1313_1630 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Clo1313_1393 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Clo1313_1631 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D Clo1313_1628 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Clo1313_1662 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clo1313_2278 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clo1313_1660 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Clo1313_0466 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ctx00740] D Clo1313_2125 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Clo1313_2127 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Clo1313_2124 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Clo1313_2126 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Clo1313_1229 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Clo1313_1549 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:ctx00750] D Clo1313_0224 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Clo1313_1931 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Clo1313_0867 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:ctx00760] D Clo1313_3018 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Clo1313_3019 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Clo1313_3017 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Clo1313_1082 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Clo1313_1056 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clo1313_2341 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clo1313_0365 cytidyltransferase-related domain protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Clo1313_1016 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Clo1313_0245 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Clo1313_1901 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Clo1313_2165 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Clo1313_1405 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:ctx00770] D Clo1313_0099 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clo1313_0305 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clo1313_0100 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clo1313_0101 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Clo1313_0304 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Clo1313_1316 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Clo1313_1317 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Clo1313_0175 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Clo1313_0943 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Clo1313_0245 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Clo1313_0982 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Clo1313_1335 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Clo1313_1486 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Clo1313_2096 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Clo1313_1364 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clo1313_1318 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:ctx00780] D Clo1313_2208 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Clo1313_1285 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clo1313_1283 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clo1313_0213 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clo1313_0720 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Clo1313_2209 Carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Clo1313_2210 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Clo1313_2207 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Clo1313_2211 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Clo1313_2212 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Clo1313_2531 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Clo1313_0172 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:ctx00790] D Clo1313_2876 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Clo1313_0169 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Clo1313_0170 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Clo1313_0168 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Clo1313_1031 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Clo1313_0864 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Clo1313_2125 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Clo1313_0657 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Clo1313_0658 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Clo1313_0656 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] C 00670 One carbon pool by folate [PATH:ctx00670] D Clo1313_1031 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Clo1313_0030 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Clo1313_1120 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Clo1313_1155 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clo1313_1011 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Clo1313_1012 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clo1313_1669 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clo1313_2897 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clo1313_1581 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clo1313_1030 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Clo1313_2132 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Clo1313_0962 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ctx00860] D Clo1313_0108 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Clo1313_0113 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Clo1313_0112 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Clo1313_0110 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Clo1313_0373 methyltransferase MtaA/CmuA family K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Clo1313_0111 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Clo1313_0109 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Clo1313_1251 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Clo1313_0701 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Clo1313_0702 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Clo1313_0703 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Clo1313_0960 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Clo1313_0704 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Clo1313_0591 Protein of unknown function DUF2383 K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D Clo1313_0592 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ctx00900] D Clo1313_1393 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Clo1313_1216 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Clo1313_0492 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Clo1313_0034 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Clo1313_0497 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Clo1313_1218 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Clo1313_1390 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Clo1313_1214 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Clo1313_0074 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clo1313_0075 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clo1313_0296 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clo1313_0295 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ctx00523] D Clo1313_1127 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clo1313_0887 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clo1313_0146 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Clo1313_1127 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ctx00946] D Clo1313_1002 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clo1313_2020 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Clo1313_0820 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:ctx00311] D Clo1313_0613 Cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] D Clo1313_1091 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:ctx00332] D Clo1313_2439 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Clo1313_1967 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ctx00261] D Clo1313_0120 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clo1313_0119 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clo1313_0873 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clo1313_1255 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clo1313_1254 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clo1313_1253 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Clo1313_1090 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ctx00521] D Clo1313_0489 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Clo1313_0993 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clo1313_1127 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Clo1313_0887 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Clo1313_0146 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Clo1313_0489 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D Clo1313_1127 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ctx00401] D Clo1313_2469 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_0424 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_1619 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Clo1313_1344 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clo1313_1345 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Clo1313_1282 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clo1313_1283 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clo1313_0720 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Clo1313_1284 acyl carrier protein K02078 acpP; acyl carrier protein D Clo1313_2101 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Clo1313_2900 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:ctx00999] D Clo1313_2924 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clo1313_1002 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clo1313_2020 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Clo1313_0820 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ctx00362] D Clo1313_1573 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Clo1313_1712 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clo1313_1524 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clo1313_0968 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:ctx00625] D Clo1313_1798 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clo1313_2911 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clo1313_2332 oxidoreductase/nitrogenase component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clo1313_2339 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Clo1313_2331 oxidoreductase/nitrogenase component 1 K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D Clo1313_1573 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:ctx00633] D Clo1313_0390 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clo1313_2034 iron-sulfur cluster-binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Clo1313_0022 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0384 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Clo1313_0023 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0385 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Clo1313_0020 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0382 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Clo1313_0383 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Clo1313_0021 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D Clo1313_2490 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Clo1313_2491 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Clo1313_2492 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D Clo1313_1573 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:ctx00626] D Clo1313_1798 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ctx03020] D Clo1313_0313 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clo1313_0314 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clo1313_0474 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clo1313_0942 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D Clo1313_1939 helicase c2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ctx03010] D Clo1313_1209 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Clo1313_0451 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Clo1313_0473 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Clo1313_0462 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Clo1313_2851 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Clo1313_0317 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Clo1313_0459 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Clo1313_2455 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Clo1313_0444 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Clo1313_0472 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Clo1313_0316 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Clo1313_0471 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Clo1313_0458 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Clo1313_1804 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Clo1313_1453 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Clo1313_0454 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Clo1313_2849 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Clo1313_0449 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Clo1313_1174 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Clo1313_0905 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Clo1313_0310 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Clo1313_0448 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Clo1313_0445 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Clo1313_0446 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Clo1313_0457 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Clo1313_0460 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Clo1313_0312 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Clo1313_2930 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Clo1313_0311 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Clo1313_0309 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Clo1313_2456 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Clo1313_0455 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Clo1313_0464 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Clo1313_0452 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Clo1313_0475 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Clo1313_0461 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Clo1313_1457 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Clo1313_1034 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Clo1313_2074 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Clo1313_0450 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Clo1313_0447 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Clo1313_0456 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Clo1313_0959 Ribosomal protein L25-like protein K02897 RP-L25; large subunit ribosomal protein L25 D Clo1313_2072 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Clo1313_0979 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Clo1313_0453 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Clo1313_0463 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Clo1313_2831 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Clo1313_1188 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Clo1313_0306 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Clo1313_3033 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Clo1313_1033 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Clo1313_0470 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Clo1313_0315 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Clo1313_0468 hypothetical protein K02875 RP-L14e; large subunit ribosomal protein L14e D Clo1313_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0072 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ctx00970] D Clo1313_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clo1313_R0026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clo1313_R0071 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clo1313_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clo1313_R0011 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clo1313_R0051 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clo1313_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clo1313_R0029 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clo1313_R0038 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clo1313_R0022 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clo1313_R0059 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clo1313_R0056 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clo1313_R0048 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clo1313_R0031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clo1313_R0009 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clo1313_R0021 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clo1313_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clo1313_R0054 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0062 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0057 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0049 tRNA-His K14226 tRNA-His; tRNA His D Clo1313_R0014 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clo1313_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0006 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clo1313_R0047 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clo1313_R0046 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clo1313_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met D Clo1313_R0039 tRNA-Met K14230 tRNA-Met; tRNA Met D Clo1313_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Clo1313_R0008 tRNA-Met K14230 tRNA-Met; tRNA Met D Clo1313_R0035 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clo1313_R0058 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clo1313_R0067 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clo1313_R0055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clo1313_R0042 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clo1313_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clo1313_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clo1313_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clo1313_R0068 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clo1313_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clo1313_R0065 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clo1313_R0061 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clo1313_R0032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clo1313_R0041 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Clo1313_R0024 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clo1313_R0034 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clo1313_R0066 tRNA-Val K14237 tRNA-Val; tRNA Val D Clo1313_R0060 tRNA-Val K14237 tRNA-Val; tRNA Val D Clo1313_R0010 tRNA-Val K14237 tRNA-Val; tRNA Val D Clo1313_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Clo1313_1578 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Clo1313_1182 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clo1313_2305 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clo1313_1183 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clo1313_2304 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clo1313_1181 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clo1313_2306 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clo1313_1301 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Clo1313_0749 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clo1313_0923 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clo1313_2307 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clo1313_2162 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clo1313_0944 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clo1313_1029 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clo1313_0011 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clo1313_2723 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clo1313_2754 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clo1313_1669 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clo1313_2897 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clo1313_1902 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clo1313_1020 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clo1313_1434 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clo1313_0403 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Clo1313_2606 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clo1313_0498 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clo1313_0922 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clo1313_2018 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clo1313_2017 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clo1313_1500 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clo1313_1537 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ctx03060] D Clo1313_0465 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clo1313_0307 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clo1313_2089 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clo1313_1314 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Clo1313_1315 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Clo1313_1259 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clo1313_3030 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clo1313_0863 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clo1313_1452 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clo1313_R0064 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Clo1313_1291 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clo1313_0924 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clo1313_1874 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clo1313_1458 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clo1313_2738 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clo1313_1309 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ctx04122] D Clo1313_1150 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_1503 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_1501 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Clo1313_0122 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Clo1313_1151 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clo1313_0121 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Clo1313_1632 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Clo1313_1629 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Clo1313_0123 Mov34/MPN/PAD-1 family protein K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome C 03018 RNA degradation [PATH:ctx03018] D Clo1313_2090 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clo1313_1803 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Clo1313_2086 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clo1313_2832 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Clo1313_1122 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Clo1313_0955 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clo1313_0997 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clo1313_0933 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clo1313_0433 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clo1313_1448 RNA chaperone Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:ctx03030] D Clo1313_0994 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clo1313_1219 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clo1313_2802 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clo1313_2763 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clo1313_1173 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clo1313_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clo1313_2929 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Clo1313_1323 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Clo1313_0903 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_2850 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_1550 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Clo1313_1461 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Clo1313_1334 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clo1313_1178 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ctx03410] D Clo1313_2726 DNA-(apurinic or apyrimidinic site) lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Clo1313_0975 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clo1313_2371 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clo1313_0660 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clo1313_0659 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clo1313_1762 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Clo1313_1370 Xylose isomerase domain-containing protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Clo1313_1334 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clo1313_0907 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clo1313_1178 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ctx03420] D Clo1313_0220 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Clo1313_1916 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Clo1313_1918 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Clo1313_0326 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Clo1313_0417 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_1249 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_2004 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_2027 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_1334 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clo1313_1178 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clo1313_1939 helicase c2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:ctx03430] D Clo1313_1445 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Clo1313_1201 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clo1313_1446 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Clo1313_0417 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_1249 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_2004 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_2027 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_1388 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Clo1313_1389 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Clo1313_0907 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clo1313_0903 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_2850 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_0994 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clo1313_1219 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clo1313_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clo1313_2802 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clo1313_1173 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clo1313_2763 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clo1313_1178 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clo1313_2275 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:ctx03440] D Clo1313_0907 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clo1313_0903 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_2850 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Clo1313_1148 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Clo1313_2800 recombination protein RecR K06187 recR; recombination protein RecR D Clo1313_1163 recA protein K03553 recA; recombination protein RecA D Clo1313_1334 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clo1313_2052 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Clo1313_2051 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Clo1313_2053 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Clo1313_0980 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clo1313_0431 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clo1313_0739 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clo1313_2922 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clo1313_0994 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clo1313_1219 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clo1313_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clo1313_2802 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clo1313_1173 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clo1313_2763 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clo1313_1671 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ctx02010] D Clo1313_0114 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Clo1313_0115 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Clo1313_0116 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Clo1313_0117 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Clo1313_2336 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein D Clo1313_2337 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Clo1313_2338 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clo1313_2354 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Clo1313_2352 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Clo1313_2353 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clo1313_1475 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Clo1313_1474 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Clo1313_1473 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Clo1313_1472 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Clo1313_2554 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clo1313_2342 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Clo1313_2346 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Clo1313_2347 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Clo1313_2345 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein D Clo1313_0077 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Clo1313_1828 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Clo1313_0079 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Clo1313_1829 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Clo1313_0078 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Clo1313_1830 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Clo1313_1826 RbsD or FucU transport K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D Clo1313_2952 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Clo1313_2953 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Clo1313_2954 ABC transporter related protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Clo1313_2321 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Clo1313_2322 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Clo1313_2323 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D Clo1313_2497 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein D Clo1313_2496 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein D Clo1313_2495 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein D Clo1313_2494 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D Clo1313_2493 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D Clo1313_0510 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Clo1313_0514 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Clo1313_0513 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Clo1313_0512 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clo1313_0511 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clo1313_1690 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Clo1313_1688 ABC-3 protein K09816 znuB; zinc transport system permease protein D Clo1313_1689 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Clo1313_2476 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Clo1313_2475 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Clo1313_2474 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Clo1313_2171 BioY protein K03523 bioY; biotin transport system substrate-specific component D Clo1313_0488 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Clo1313_0476 Cobalt ATP-binding cassette-like protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clo1313_0487 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clo1313_0494 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Clo1313_0493 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Clo1313_2291 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein D Clo1313_2292 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein D Clo1313_2865 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Clo1313_2866 ABC transporter related protein K19083 braD; bacitracin transport system ATP-binding protein D Clo1313_2551 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clo1313_2552 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clo1313_2262 ABC transporter transmembrane region K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_1825 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_0698 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_0699 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_2261 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_1824 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_1703 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Clo1313_2943 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ctx02060] D Clo1313_0325 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Clo1313_0324 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Clo1313_2114 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Clo1313_2084 phosphoryl transfer system HPr K02784 ptsH; phosphocarrier protein HPr C 03070 Bacterial secretion system [PATH:ctx03070] D Clo1313_1314 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Clo1313_1315 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Clo1313_0307 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clo1313_2089 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clo1313_0465 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clo1313_1259 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clo1313_3030 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clo1313_0863 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clo1313_1291 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clo1313_1452 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:ctx02020] D Clo1313_0856 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clo1313_0855 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clo1313_2416 integral membrane sensor signal transduction histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Clo1313_0839 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clo1313_0972 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_1969 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_0805 TIR protein K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_2909 flagellin domain protein K02406 fliC; flagellin D Clo1313_2910 flagellin domain protein K02406 fliC; flagellin D Clo1313_1725 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Clo1313_0056 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clo1313_2993 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clo1313_2994 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Clo1313_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clo1313_2292 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein D Clo1313_2291 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein D Clo1313_2865 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Clo1313_2866 ABC transporter related protein K19083 braD; bacitracin transport system ATP-binding protein D Clo1313_2293 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clo1313_2867 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clo1313_2294 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Clo1313_2868 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Clo1313_1422 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Clo1313_2572 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clo1313_0637 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clo1313_1409 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clo1313_1879 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Clo1313_0493 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Clo1313_0494 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Clo1313_0947 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clo1313_3021 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clo1313_0024 putative lipoprotein K07800 agrD; AgrD protein D Clo1313_2818 putative autoinducer prepeptide K07800 agrD; AgrD protein D Clo1313_0945 signal transduction histidine kinase regulating citrate/malate metabolism K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clo1313_2912 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Clo1313_0990 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clo1313_0914 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clo1313_1599 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clo1313_0915 Type II secretion system F domain K12510 tadB; tight adherence protein B D Clo1313_0916 Type II secretion system F domain K12511 tadC; tight adherence protein C D Clo1313_1357 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2031 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2038 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2303 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_1109 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clo1313_1110 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clo1313_0408 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1507 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1413 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1940 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_2956 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_0407 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0581 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0252 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_1440 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_1929 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0707 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2259 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2193 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2195 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0587 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0405 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_0580 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1729 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1341 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1412 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2151 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2194 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2196 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2959 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_0406 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1730 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1411 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_2958 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_0868 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_0937 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1741 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_2066 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1410 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1416 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_0409 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1731 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1414 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_2955 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_2351 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clo1313_0715 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clo1313_2498 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clo1313_2350 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clo1313_0188 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clo1313_0500 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Clo1313_2189 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1396 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1603 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1477 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1659 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2192 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_3023 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1604 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1808 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1809 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1425 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0413 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1694 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2234 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0395 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1816 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2805 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1701 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1788 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_1955 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2233 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0349 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0350 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_0400 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2856 Carbohydrate binding family 6 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clo1313_2919 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ctx02024] D Clo1313_1448 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clo1313_1344 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clo1313_1345 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Clo1313_2578 glycosyl transferase family 28 K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Clo1313_2579 glycosyl transferase family 28 K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Clo1313_2843 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Clo1313_0501 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Clo1313_1021 PKD domain containing protein K20276 bapA; large repetitive protein D Clo1313_1024 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_0677 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_2099 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_1398 coagulation factor 5/8 type domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Clo1313_0399 Dockerin type 1 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Clo1313_2202 Dockerin type 1 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Clo1313_2127 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Clo1313_0024 putative lipoprotein K07800 agrD; AgrD protein D Clo1313_2818 putative autoinducer prepeptide K07800 agrD; AgrD protein D Clo1313_0947 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clo1313_3021 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clo1313_0945 signal transduction histidine kinase regulating citrate/malate metabolism K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clo1313_1422 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Clo1313_0510 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Clo1313_0514 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Clo1313_0513 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Clo1313_0512 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clo1313_0511 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clo1313_1703 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Clo1313_1308 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clo1313_3030 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clo1313_0307 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clo1313_2089 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clo1313_0465 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clo1313_1259 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clo1313_0863 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clo1313_1291 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clo1313_1452 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clo1313_0637 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clo1313_1409 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clo1313_0742 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ctx02030] D Clo1313_0407 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0581 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0252 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_1440 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_1929 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0707 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2259 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2193 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2195 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0587 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0077 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Clo1313_1828 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Clo1313_0406 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1730 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1411 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_2958 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_0405 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_0580 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1729 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1341 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1412 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2151 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2194 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2196 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2959 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_0868 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_0937 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1741 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_2066 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1410 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1416 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1728 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Clo1313_0037 hypothetical protein K03409 cheX; chemotaxis protein CheX D Clo1313_1083 CheC domain protein K03409 cheX; chemotaxis protein CheX D Clo1313_2105 CheC domain protein K03409 cheX; chemotaxis protein CheX D Clo1313_2981 CheC domain protein K03409 cheX; chemotaxis protein CheX D Clo1313_0409 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1731 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1414 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_2955 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1727 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Clo1313_0408 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1507 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1413 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1940 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_2956 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1754 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clo1313_1743 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Clo1313_1742 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Clo1313_0056 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clo1313_0057 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ctx02040] D Clo1313_1756 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Clo1313_1755 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Clo1313_1754 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clo1313_1753 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Clo1313_1752 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clo1313_1751 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Clo1313_1749 Flagellar hook-length control protein-like, C-terminal domain K02414 fliK; flagellar hook-length control protein FliK D Clo1313_1743 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Clo1313_1742 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Clo1313_1740 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Clo1313_1739 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clo1313_1738 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clo1313_1737 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Clo1313_1735 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clo1313_1736 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clo1313_1758 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Clo1313_1757 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Clo1313_1748 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Clo1313_1746 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Clo1313_0207 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Clo1313_0208 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D Clo1313_0209 Flagellar protein FlgJ-like protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Clo1313_2916 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Clo1313_2917 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Clo1313_2915 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Clo1313_2909 flagellin domain protein K02406 fliC; flagellin D Clo1313_2910 flagellin domain protein K02406 fliC; flagellin D Clo1313_2891 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Clo1313_2890 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Clo1313_0056 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clo1313_0057 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Clo1313_2919 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Clo1313_1324 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Clo1313_1725 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Clo1313_2090 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D Clo1313_1581 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ctx01501] D Clo1313_1904 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Clo1313_0510 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Clo1313_0514 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Clo1313_0513 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Clo1313_0512 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clo1313_0511 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clo1313_1844 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_0680 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_0697 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_2484 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_2485 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_0696 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_1845 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_1091 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Clo1313_2433 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clo1313_1204 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clo1313_2140 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ctx01502] D Clo1313_2609 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clo1313_0236 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clo1313_0288 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clo1313_1241 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Clo1313_1242 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clo1313_1244 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clo1313_2572 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ctx01503] D Clo1313_1176 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_2048 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_2477 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_1198 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_0972 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_1969 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_0805 TIR protein K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ctx01000] C 01001 Protein kinases [BR:ctx01001] D Clo1313_1663 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Clo1313_1593 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Clo1313_1889 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Clo1313_0440 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clo1313_0442 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clo1313_0736 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clo1313_0242 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Clo1313_0890 capsular exopolysaccharide family K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D Clo1313_0856 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clo1313_2416 integral membrane sensor signal transduction histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Clo1313_0839 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clo1313_2993 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clo1313_2293 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clo1313_2867 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clo1313_1422 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Clo1313_0990 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clo1313_0945 signal transduction histidine kinase regulating citrate/malate metabolism K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clo1313_1655 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Clo1313_0495 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Clo1313_0496 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Clo1313_0406 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1730 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1411 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_2958 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_2351 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clo1313_2500 response regulator receiver sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ctx01009] D Clo1313_1057 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Clo1313_0997 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clo1313_1687 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG D Clo1313_1693 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Clo1313_1664 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Clo1313_1592 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:ctx01002] D Clo1313_1309 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Clo1313_0919 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clo1313_1368 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clo1313_1692 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Clo1313_1175 spore protease K06012 gpr; spore protease [EC:3.4.24.78] D Clo1313_1774 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D Clo1313_1846 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Clo1313_2820 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Clo1313_1703 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Clo1313_0555 Peptidoglycan-binding lysin domain K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-] D Clo1313_0044 NLP/P60 protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13] D Clo1313_1009 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clo1313_1099 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clo1313_1681 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Clo1313_0547 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D Clo1313_0947 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clo1313_3021 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clo1313_0556 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Clo1313_0048 Abortive infection protein K07052 K07052; CAAX protease family protein D Clo1313_2605 Abortive infection protein K07052 K07052; CAAX protease family protein D Clo1313_2835 Abortive infection protein K07052 K07052; CAAX protease family protein D Clo1313_0082 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Clo1313_0017 peptidase M14 carboxypeptidase A K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11] D Clo1313_2572 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clo1313_1466 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Clo1313_0700 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Clo1313_0467 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Clo1313_1696 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Clo1313_1372 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Clo1313_2880 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D Clo1313_2926 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clo1313_2950 AAA ATPase central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clo1313_2133 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D Clo1313_1217 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Clo1313_1844 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_0680 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_0697 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_2484 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_0972 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_1969 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_0805 TIR protein K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_0689 peptidase S8 and S53 subtilisin kexin sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66] D Clo1313_1544 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_0730 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1957 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1025 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1089 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_0329 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Clo1313_2396 peptidase S14 ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Clo1313_2149 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Clo1313_0331 Sigma 54 interacting domain protein K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D Clo1313_1449 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Clo1313_2881 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Clo1313_0924 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clo1313_1874 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clo1313_1458 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clo1313_2738 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clo1313_2601 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Clo1313_2549 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Clo1313_0829 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D Clo1313_2878 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D Clo1313_1165 Rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D Clo1313_1408 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D Clo1313_1205 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Clo1313_2744 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Clo1313_1558 HflC protein K04087 hflC; modulator of FtsH protease HflC D Clo1313_1559 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:ctx01003] D Clo1313_0646 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Clo1313_3001 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Clo1313_0728 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clo1313_0974 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Clo1313_1947 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Clo1313_2433 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clo1313_2578 glycosyl transferase family 28 K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Clo1313_2579 glycosyl transferase family 28 K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Clo1313_0667 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF D Clo1313_0292 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Clo1313_0187 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clo1313_1036 glycosyltransferase 36 K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ctx01005] D Clo1313_0645 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Clo1313_0648 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Clo1313_0187 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ctx01011] D Clo1313_0202 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clo1313_2989 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clo1313_2119 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clo1313_0214 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Clo1313_1172 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clo1313_1240 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clo1313_2609 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clo1313_0236 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clo1313_0288 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clo1313_2608 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Clo1313_1242 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clo1313_1244 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clo1313_2978 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clo1313_0225 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Clo1313_1162 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Clo1313_2433 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clo1313_1204 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clo1313_2140 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clo1313_1239 penicillin-binding protein transpeptidase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clo1313_0598 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Clo1313_1544 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_0730 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1957 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1025 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_1089 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clo1313_0556 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Clo1313_2572 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clo1313_0555 Peptidoglycan-binding lysin domain K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-] D Clo1313_1336 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clo1313_1207 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Clo1313_2624 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clo1313_0046 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clo1313_0203 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clo1313_1256 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clo1313_1176 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_2048 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_2477 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_1198 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ctx01004] D Clo1313_1282 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clo1313_1281 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clo1313_2100 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clo1313_2102 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clo1313_1285 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clo1313_1283 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clo1313_0213 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clo1313_0720 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Clo1313_1686 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Clo1313_1024 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_0677 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_2099 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_1994 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Clo1313_1280 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clo1313_1191 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clo1313_1511 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ctx01006] D Clo1313_1390 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Clo1313_1214 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clo1313_1447 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Clo1313_0592 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:ctx01007] D Clo1313_0403 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Clo1313_1301 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Clo1313_1578 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Clo1313_1500 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clo1313_1537 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Clo1313_2723 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clo1313_2606 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clo1313_2754 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clo1313_1434 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clo1313_1902 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clo1313_1020 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clo1313_0923 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clo1313_2307 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clo1313_2162 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clo1313_0922 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clo1313_0944 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clo1313_0011 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clo1313_0498 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clo1313_1029 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clo1313_0749 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clo1313_2018 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clo1313_2017 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clo1313_1467 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_1657 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Clo1313_0652 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clo1313_1858 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D Clo1313_0424 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_1619 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clo1313_2210 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Clo1313_0389 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clo1313_2558 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clo1313_2207 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Clo1313_0113 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Clo1313_1364 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clo1313_1931 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Clo1313_0233 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Clo1313_2894 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ctx00194] D Clo1313_0196 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Clo1313_0195 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Clo1313_0194 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Clo1313_0193 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Clo1313_0192 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Clo1313_0191 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Clo1313_0190 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Clo1313_0189 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ctx03000] D Clo1313_0348 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Clo1313_0223 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Clo1313_0205 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D Clo1313_0089 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clo1313_0396 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clo1313_2023 transcriptional regulator, LacI family K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D Clo1313_0412 TipAS antibiotic-recognition domain-containing protein K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D Clo1313_1691 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Clo1313_0527 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Clo1313_0360 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Clo1313_2200 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Clo1313_0107 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clo1313_1504 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clo1313_2535 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clo1313_2536 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clo1313_2324 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clo1313_1100 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Clo1313_1984 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Clo1313_2568 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Clo1313_2595 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Clo1313_1608 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Clo1313_0847 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Clo1313_2485 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_0696 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_1845 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_0172 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Clo1313_0365 cytidyltransferase-related domain protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Clo1313_2225 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Clo1313_0026 helix-turn-helix domain protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator D Clo1313_0215 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Clo1313_2553 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator D Clo1313_1799 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Clo1313_2471 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Clo1313_0289 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Clo1313_2758 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Clo1313_0244 stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Clo1313_0008 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clo1313_3025 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clo1313_0491 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Clo1313_1406 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Clo1313_0931 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Clo1313_2465 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D Clo1313_2160 phage shock protein C, PspC K03973 pspC; phage shock protein C D Clo1313_1156 phage shock protein C, PspC K03973 pspC; phage shock protein C D Clo1313_0995 tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D Clo1313_1262 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Clo1313_1770 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Clo1313_1236 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ctx03021] D Clo1313_1939 helicase c2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Clo1313_0474 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clo1313_0313 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clo1313_0314 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clo1313_0942 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Clo1313_1324 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Clo1313_0127 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clo1313_0320 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clo1313_0543 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clo1313_1330 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clo1313_2232 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clo1313_0811 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clo1313_0441 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily K03090 sigB; RNA polymerase sigma-B factor D Clo1313_1772 RNA polymerase, sigma 28 subunit, SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clo1313_1773 RNA polymerase, sigma 28 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clo1313_1203 RNA polymerase, sigma 28 subunit, SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clo1313_2111 RNA polymerase, sigma 28 subunit, SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clo1313_2716 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor D Clo1313_0104 RNA polymerase, sigma 28 subunit, SigI K03093 sigI; RNA polymerase sigma-I factor D Clo1313_0525 RNA polymerase, sigma 28 subunit, SigI K03093 sigI; RNA polymerase sigma-I factor D Clo1313_0986 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03093 sigI; RNA polymerase sigma-I factor D Clo1313_1818 RNA polymerase, sigma 28 subunit, SigI K03093 sigI; RNA polymerase sigma-I factor D Clo1313_1911 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Clo1313_1961 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Clo1313_2174 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Clo1313_2778 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Clo1313_1725 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Clo1313_1222 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Clo1313_1387 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Clo1313_0891 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Clo1313_0308 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Clo1313_1889 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Clo1313_2825 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Clo1313_1654 response regulator receiver protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Clo1313_2148 protein serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Clo1313_0439 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Clo1313_0440 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clo1313_0442 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clo1313_0736 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clo1313_0577 transcription elongation factor GreA/GreB domain-containing protein K03624 greA; transcription elongation factor GreA D Clo1313_0438 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Clo1313_2832 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ctx03019] D Clo1313_2075 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Clo1313_1286 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clo1313_0955 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clo1313_1122 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Clo1313_2086 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clo1313_2090 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clo1313_1803 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Clo1313_2832 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Clo1313_0997 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clo1313_0933 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clo1313_0433 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clo1313_1448 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clo1313_2912 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Clo1313_2118 hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:ctx03011] D Clo1313_0468 hypothetical protein K02875 RP-L14e; large subunit ribosomal protein L14e D Clo1313_1209 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Clo1313_0451 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Clo1313_0473 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Clo1313_0462 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Clo1313_2851 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Clo1313_0317 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Clo1313_0459 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Clo1313_2455 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Clo1313_0444 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Clo1313_0472 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Clo1313_0316 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Clo1313_0471 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Clo1313_0458 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Clo1313_1804 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Clo1313_1453 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Clo1313_0454 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Clo1313_2849 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Clo1313_0449 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Clo1313_1174 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Clo1313_0905 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Clo1313_0310 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Clo1313_0448 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Clo1313_0445 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Clo1313_0446 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Clo1313_0457 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Clo1313_0460 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Clo1313_2930 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Clo1313_0311 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Clo1313_0309 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Clo1313_0312 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Clo1313_2456 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Clo1313_0455 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Clo1313_0464 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Clo1313_0452 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Clo1313_0475 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Clo1313_0461 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Clo1313_1457 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Clo1313_1034 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Clo1313_2074 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Clo1313_0450 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Clo1313_0447 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Clo1313_0456 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Clo1313_2072 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Clo1313_0979 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Clo1313_0453 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Clo1313_0463 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Clo1313_2831 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Clo1313_1188 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Clo1313_0306 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Clo1313_3033 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Clo1313_1033 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Clo1313_0470 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Clo1313_0959 Ribosomal protein L25-like protein K02897 RP-L25; large subunit ribosomal protein L25 D Clo1313_0315 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Clo1313_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0072 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ctx03009] D Clo1313_1286 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clo1313_1146 GTP-binding protein Era K03595 era; GTPase D Clo1313_2071 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Clo1313_1222 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Clo1313_1387 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Clo1313_0891 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Clo1313_0308 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Clo1313_0712 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Clo1313_2750 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Clo1313_1666 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Clo1313_0477 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Clo1313_0981 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Clo1313_0936 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Clo1313_3026 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Clo1313_1237 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Clo1313_2759 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Clo1313_0731 hypothetical protein K18845 rmt; 16S rRNA (guanine(1405)-N(7))-methyltransferase [EC:2.1.1.179] D Clo1313_1394 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Clo1313_2718 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Clo1313_2987 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Clo1313_1951 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Clo1313_2283 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Clo1313_1665 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Clo1313_2425 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Clo1313_1531 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Clo1313_2634 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Clo1313_1310 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clo1313_1418 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clo1313_1950 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clo1313_2447 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Clo1313_1455 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Clo1313_1275 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Clo1313_0935 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Clo1313_2075 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Clo1313_2080 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Clo1313_2719 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Clo1313_1662 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clo1313_2278 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clo1313_1190 ribosome-associated GTPase EngA K03977 engA; GTPase D Clo1313_1459 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D Clo1313_2740 GTP-binding proten HflX K03665 hflX; GTPase D Clo1313_0182 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Clo1313_0909 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Clo1313_1226 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Clo1313_1221 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Clo1313_0003 S4 domain protein YaaA K14761 rlbA; ribosome-associated protein D Clo1313_1019 iojap-like protein K09710 ybeB; ribosome-associated protein D Clo1313_1144 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Clo1313_2069 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Clo1313_0416 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Clo1313_1342 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Clo1313_1187 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ctx03016] D Clo1313_1539 CBS domain containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Clo1313_0859 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Clo1313_1979 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Clo1313_0498 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clo1313_1434 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clo1313_1020 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clo1313_2754 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clo1313_1301 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Clo1313_2606 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clo1313_0923 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clo1313_2307 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clo1313_0749 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clo1313_2162 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clo1313_0944 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clo1313_1029 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clo1313_0011 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clo1313_2723 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clo1313_1902 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clo1313_0922 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clo1313_2018 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clo1313_2017 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clo1313_1500 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clo1313_1537 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Clo1313_0910 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Clo1313_0883 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Clo1313_2129 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Clo1313_0490 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Clo1313_1228 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Clo1313_1150 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_1503 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_0182 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Clo1313_1447 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Clo1313_3028 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Clo1313_3027 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Clo1313_3032 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Clo1313_R0040 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Clo1313_2045 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Clo1313_1719 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Clo1313_0610 phosphotransferase KptA/Tpt1 K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D Clo1313_0403 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Clo1313_1578 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Clo1313_0085 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Clo1313_0275 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Clo1313_1438 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Clo1313_2083 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Clo1313_2314 Methyltransferase type 12 K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Clo1313_1759 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Clo1313_1456 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Clo1313_1327 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Clo1313_2104 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Clo1313_2760 Methyltransferase type 11 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Clo1313_1035 RNA methyltransferase, TrmH family, group 3 K03437 spoU; RNA methyltransferase, TrmH family D Clo1313_1501 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Clo1313_2845 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Clo1313_1257 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Clo1313_0656 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Clo1313_0657 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Clo1313_0658 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Clo1313_2067 4Fe-4S ferredoxin iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clo1313_2050 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Clo1313_1258 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Clo1313_0734 tRNA-guanine transglycosylase, various specificities K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D Clo1313_1151 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clo1313_2928 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Clo1313_2448 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Clo1313_0332 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Clo1313_2449 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Clo1313_0661 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Clo1313_0956 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Clo1313_2086 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clo1313_1803 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ctx03012] D Clo1313_1225 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Clo1313_1032 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Clo1313_2472 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Clo1313_1210 translation elongation factor Ts K02357 tsf; elongation factor Ts D Clo1313_0319 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clo1313_0318 translation elongation factor G K02355 fusA; elongation factor G D Clo1313_2467 translation elongation factor G K02355 fusA; elongation factor G D Clo1313_0180 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Clo1313_1212 ribosome recycling factor K02838 frr; ribosome recycling factor D Clo1313_0059 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Clo1313_0219 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Clo1313_0469 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Clo1313_1373 translation elongation factor P K02356 efp; elongation factor P D Clo1313_1856 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D Clo1313_1896 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ctx03110] D Clo1313_1040 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Clo1313_2462 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Clo1313_1914 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Clo1313_0330 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Clo1313_1687 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG D Clo1313_0933 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clo1313_0433 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clo1313_0934 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Clo1313_2544 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Clo1313_0932 GrpE protein K03687 GRPE; molecular chaperone GrpE D Clo1313_0678 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Clo1313_2197 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Clo1313_0432 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Clo1313_0972 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_1969 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_0805 TIR protein K04771 degP; serine protease Do [EC:3.4.21.107] D Clo1313_2926 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clo1313_2950 AAA ATPase central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clo1313_0189 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Clo1313_0569 hydrogenase expression/synthesis HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Clo1313_0568 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Clo1313_0689 peptidase S8 and S53 subtilisin kexin sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66] D Clo1313_2164 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Clo1313_0221 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Clo1313_1862 thioredoxin K03671 TXN; thioredoxin D Clo1313_1993 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:ctx04131] D Clo1313_1508 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Clo1313_2095 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clo1313_0813 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clo1313_1687 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:ctx03051] D Clo1313_1687 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ctx03032] D Clo1313_1550 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Clo1313_0638 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clo1313_0246 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clo1313_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clo1313_2929 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Clo1313_0049 AAA ATPase K02315 dnaC; DNA replication protein DnaC D Clo1313_1323 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Clo1313_0903 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_2850 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_0994 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clo1313_1219 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clo1313_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clo1313_1173 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clo1313_2763 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clo1313_2802 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clo1313_1461 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Clo1313_1334 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clo1313_1178 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clo1313_2275 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clo1313_1921 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clo1313_3024 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clo1313_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clo1313_1922 DNA gyrase subunit B domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clo1313_1760 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Clo1313_0092 DNA topoisomerase type IA central domain protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ctx03036] D Clo1313_1286 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clo1313_0638 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clo1313_0246 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clo1313_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clo1313_1448 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clo1313_1290 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Clo1313_1536 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Clo1313_1535 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Clo1313_1776 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Clo1313_0250 Septum formation initiator K13052 divIC; cell division protein DivIC D Clo1313_2552 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clo1313_0590 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Clo1313_1589 FHA domain containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Clo1313_1118 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Clo1313_2642 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Clo1313_1238 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Clo1313_1778 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Clo1313_1243 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D Clo1313_2551 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clo1313_1775 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clo1313_2746 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Clo1313_1176 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_2048 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_2477 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_1198 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_2139 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Clo1313_2138 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Clo1313_2137 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Clo1313_1433 DivIVA domain K04074 divIVA; cell division initiation protein D Clo1313_1430 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF D Clo1313_0206 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clo1313_2143 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clo1313_2142 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Clo1313_2141 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Clo1313_1235 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Clo1313_0007 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Clo1313_0008 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clo1313_3025 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clo1313_3027 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Clo1313_3026 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Clo1313_1759 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Clo1313_1547 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Clo1313_1495 integrase family protein K04763 xerD; integrase/recombinase XerD D Clo1313_1633 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein D Clo1313_2115 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:ctx03400] D Clo1313_2319 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Clo1313_2726 DNA-(apurinic or apyrimidinic site) lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Clo1313_0975 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clo1313_2371 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clo1313_1939 helicase c2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Clo1313_2248 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clo1313_2374 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clo1313_0679 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clo1313_2743 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Clo1313_0660 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clo1313_0659 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clo1313_1762 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Clo1313_1370 Xylose isomerase domain-containing protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Clo1313_0907 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clo1313_1178 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clo1313_1334 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clo1313_1916 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Clo1313_1918 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Clo1313_0326 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Clo1313_0417 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_1249 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_2004 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_2027 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clo1313_0313 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clo1313_0314 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clo1313_0474 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clo1313_0942 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Clo1313_0220 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Clo1313_1445 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Clo1313_1201 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clo1313_1446 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Clo1313_1388 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Clo1313_1389 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Clo1313_0994 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clo1313_1219 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clo1313_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clo1313_1173 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clo1313_2763 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clo1313_2802 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clo1313_0903 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_2850 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_2275 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clo1313_0739 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clo1313_2922 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clo1313_1163 recA protein K03553 recA; recombination protein RecA D Clo1313_2052 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Clo1313_2051 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Clo1313_2053 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Clo1313_1671 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Clo1313_1273 Rad50 zinc hook domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Clo1313_0042 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Clo1313_1272 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Clo1313_2459 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Clo1313_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Clo1313_0980 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clo1313_0431 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clo1313_1148 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Clo1313_2800 recombination protein RecR K06187 recR; recombination protein RecR D Clo1313_1407 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Clo1313_2694 recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Clo1313_2695 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Clo1313_2970 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Clo1313_1921 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clo1313_3024 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clo1313_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clo1313_1922 DNA gyrase subunit B domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clo1313_1760 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Clo1313_0638 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clo1313_0246 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clo1313_2742 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Clo1313_1449 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Clo1313_2881 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Clo1313_1164 regulatory protein RecX K03565 recX; regulatory protein D Clo1313_1645 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Clo1313_2179 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Clo1313_1227 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:ctx03029] D Clo1313_1225 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Clo1313_1032 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Clo1313_1210 translation elongation factor Ts K02357 tsf; elongation factor Ts D Clo1313_0319 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clo1313_0318 translation elongation factor G K02355 fusA; elongation factor G D Clo1313_2467 translation elongation factor G K02355 fusA; elongation factor G D Clo1313_1146 GTP-binding protein Era K03595 era; GTPase D Clo1313_1500 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clo1313_1020 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clo1313_0923 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clo1313_2307 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clo1313_0944 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clo1313_2606 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clo1313_1182 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clo1313_2305 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clo1313_1183 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clo1313_2304 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clo1313_1181 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clo1313_2306 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clo1313_1085 protein of unknown function DUF155 K23499 RMND1; required for meiotic nuclear division protein 1 D Clo1313_0903 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_2850 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clo1313_0933 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clo1313_0932 GrpE protein K03687 GRPE; molecular chaperone GrpE D Clo1313_0433 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clo1313_0432 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Clo1313_0934 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Clo1313_1150 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_1503 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_3030 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clo1313_1687 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ctx02000] D Clo1313_2262 ABC transporter transmembrane region K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_1825 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_0698 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_0699 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_2261 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_1824 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clo1313_0549 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clo1313_1703 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Clo1313_2943 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein D Clo1313_0114 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Clo1313_0115 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Clo1313_0116 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Clo1313_0117 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Clo1313_2336 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein D Clo1313_2337 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Clo1313_2338 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clo1313_2354 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Clo1313_2352 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Clo1313_2353 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clo1313_1475 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Clo1313_1474 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Clo1313_1473 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Clo1313_1472 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Clo1313_0391 extracellular solute-binding protein family 3 K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clo1313_0162 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clo1313_2774 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clo1313_0379 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clo1313_0392 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clo1313_0161 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clo1313_0378 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clo1313_0160 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clo1313_2776 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clo1313_0393 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clo1313_2554 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clo1313_0077 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Clo1313_1828 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Clo1313_0079 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Clo1313_1829 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Clo1313_0078 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Clo1313_1830 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Clo1313_2342 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Clo1313_2346 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Clo1313_2347 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Clo1313_2345 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein D Clo1313_1194 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clo1313_2628 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clo1313_2786 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clo1313_1167 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clo1313_1195 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Clo1313_2784 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Clo1313_1196 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clo1313_2783 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clo1313_2952 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Clo1313_2953 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Clo1313_2954 ABC transporter related protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Clo1313_2321 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Clo1313_2322 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Clo1313_2323 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D Clo1313_2497 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein D Clo1313_2496 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein D Clo1313_2495 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein D Clo1313_2494 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D Clo1313_2493 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D Clo1313_0793 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Clo1313_0531 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Clo1313_0794 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Clo1313_0795 ABC transporter related protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Clo1313_0510 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Clo1313_0514 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Clo1313_0513 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Clo1313_0512 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clo1313_0511 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clo1313_1308 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clo1313_2428 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Clo1313_2427 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Clo1313_2426 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Clo1313_1690 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Clo1313_1688 ABC-3 protein K09816 znuB; zinc transport system permease protein D Clo1313_1689 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Clo1313_2475 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Clo1313_2476 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Clo1313_2474 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Clo1313_2171 BioY protein K03523 bioY; biotin transport system substrate-specific component D Clo1313_0488 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Clo1313_0476 Cobalt ATP-binding cassette-like protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clo1313_0487 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clo1313_0494 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Clo1313_0493 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Clo1313_0298 ABC-2 type transporter K25151 gldF; gliding motility-associated transport system permease protein D Clo1313_0297 ABC transporter related protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D Clo1313_0299 ABC-type uncharacterized transport system K25153 gldG; gliding motility-associatede transport system auxiliary component D Clo1313_2291 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein D Clo1313_2292 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein D Clo1313_2865 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Clo1313_2866 ABC transporter related protein K19083 braD; bacitracin transport system ATP-binding protein D Clo1313_2551 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clo1313_2552 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clo1313_1071 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein D Clo1313_1072 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein D Clo1313_1070 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein D Clo1313_2299 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clo1313_0617 membrane spanning protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clo1313_0616 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clo1313_2300 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clo1313_0519 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clo1313_2965 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clo1313_0833 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clo1313_1401 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clo1313_1697 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clo1313_2415 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clo1313_2328 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clo1313_0723 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clo1313_2770 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clo1313_1838 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clo1313_0721 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clo1313_0211 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clo1313_1698 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clo1313_2414 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clo1313_2436 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clo1313_2329 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clo1313_2769 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clo1313_2041 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 D Clo1313_2979 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Clo1313_1479 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clo1313_1928 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clo1313_0803 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clo1313_1055 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Clo1313_0012 major facilitator superfamily MFS_1 K23677 SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter D Clo1313_0325 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Clo1313_0324 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Clo1313_2114 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Clo1313_2084 phosphoryl transfer system HPr K02784 ptsH; phosphocarrier protein HPr D Clo1313_2260 ammonium transporter K03320 amt; ammonium transporter, Amt family D Clo1313_0625 Protein of unknown function DUF3520 K07114 yfbK; Ca-activated chloride channel homolog D Clo1313_0684 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Clo1313_0094 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D Clo1313_2610 magnesium transporter K06213 mgtE; magnesium transporter D Clo1313_0056 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clo1313_0057 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Clo1313_2888 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Clo1313_0411 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clo1313_1553 spore germination protein K06296 gerKB; spore germination protein KB D Clo1313_1556 spore germination protein K06296 gerKB; spore germination protein KB D Clo1313_2721 spore germination protein K06311 yndE; spore germination protein D Clo1313_0670 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Clo1313_0181 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Clo1313_2256 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Clo1313_0724 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Clo1313_0346 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter D Clo1313_0733 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Clo1313_0732 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Clo1313_1007 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Clo1313_2844 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D Clo1313_0398 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D Clo1313_2168 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D Clo1313_1101 arsenical-resistance protein K03325 ACR3; arsenite transporter D Clo1313_0614 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D Clo1313_0278 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D Clo1313_0225 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Clo1313_1162 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Clo1313_1006 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Clo1313_0822 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Clo1313_0821 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Clo1313_2276 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein D Clo1313_1243 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D Clo1313_0830 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein D Clo1313_0823 Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Clo1313_1712 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clo1313_1523 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Clo1313_1526 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Clo1313_1524 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clo1313_0968 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Clo1313_2620 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Clo1313_0242 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Clo1313_0241 lipopolysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D Clo1313_0890 capsular exopolysaccharide family K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D Clo1313_0364 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Clo1313_0846 FeoA family protein K04758 feoA; ferrous iron transport protein A D Clo1313_1609 FeoA family protein K04758 feoA; ferrous iron transport protein A D Clo1313_1610 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Clo1313_0845 Ferrous iron transport protein B domain-containing protein K04759 feoB; ferrous iron transport protein B D Clo1313_2593 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:ctx02044] D Clo1313_0919 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clo1313_1368 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clo1313_1109 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clo1313_1110 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clo1313_1106 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Clo1313_1367 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Clo1313_1108 Type II secretion system F domain K02653 pilC; type IV pilus assembly protein PilC D Clo1313_0276 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Clo1313_1569 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Clo1313_1107 twitching motility protein K02669 pilT; twitching motility protein PilT D Clo1313_1972 twitching motility protein K02669 pilT; twitching motility protein PilT D Clo1313_1692 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Clo1313_0914 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clo1313_1599 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clo1313_0915 Type II secretion system F domain K12510 tadB; tight adherence protein B D Clo1313_0916 Type II secretion system F domain K12511 tadC; tight adherence protein C D Clo1313_1431 protein of unknown function YGGT K02221 yggT; YggT family protein D Clo1313_1026 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Clo1313_0186 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Clo1313_1623 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Clo1313_0341 hypothetical protein K02238 comEC; competence protein ComEC D Clo1313_1369 Late competence development protein ComFB K02241 comFB; competence protein ComFB D Clo1313_1735 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clo1313_1736 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clo1313_1463 type III secretion exporter K04061 flhB2; flagellar biosynthesis protein D Clo1313_1755 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Clo1313_1753 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Clo1313_1752 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clo1313_1742 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Clo1313_1740 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Clo1313_1739 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clo1313_1738 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clo1313_1737 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Clo1313_0863 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clo1313_1314 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Clo1313_0307 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clo1313_1315 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Clo1313_2089 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clo1313_0465 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clo1313_1452 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clo1313_1291 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clo1313_1259 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clo1313_3030 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:ctx02042] D Clo1313_0411 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clo1313_0742 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] C 02022 Two-component system [BR:ctx02022] D Clo1313_0856 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clo1313_0855 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clo1313_2416 integral membrane sensor signal transduction histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Clo1313_0839 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clo1313_2993 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clo1313_2994 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Clo1313_2293 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clo1313_2867 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clo1313_2294 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Clo1313_2868 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Clo1313_1422 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Clo1313_0841 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Clo1313_0970 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Clo1313_0990 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clo1313_0637 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clo1313_1409 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clo1313_0945 signal transduction histidine kinase regulating citrate/malate metabolism K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clo1313_1655 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Clo1313_0495 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Clo1313_0496 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Clo1313_0406 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1730 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1411 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_2958 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_0868 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_0937 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1741 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_2066 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1410 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1416 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_0409 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1731 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1414 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_2955 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_2351 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clo1313_0715 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clo1313_2498 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clo1313_2350 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clo1313_2030 ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR D Clo1313_2500 response regulator receiver sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:ctx02035] D Clo1313_0406 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1730 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_1411 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_2958 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clo1313_0405 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_0580 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1729 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1341 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_1412 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2151 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2194 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2196 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_2959 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clo1313_0037 hypothetical protein K03409 cheX; chemotaxis protein CheX D Clo1313_1083 CheC domain protein K03409 cheX; chemotaxis protein CheX D Clo1313_2105 CheC domain protein K03409 cheX; chemotaxis protein CheX D Clo1313_2981 CheC domain protein K03409 cheX; chemotaxis protein CheX D Clo1313_1728 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Clo1313_1727 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Clo1313_0408 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1507 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1413 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_1940 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_2956 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clo1313_0409 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1731 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_1414 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_2955 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clo1313_0868 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_0937 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1741 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_2066 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1410 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_1416 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clo1313_0407 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0581 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0252 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_1440 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_1929 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0707 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2259 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2193 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_2195 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_0587 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clo1313_1753 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Clo1313_1752 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clo1313_1751 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Clo1313_1740 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Clo1313_1739 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clo1313_1738 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clo1313_1737 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Clo1313_1735 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clo1313_1736 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clo1313_1754 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clo1313_1743 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Clo1313_1742 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Clo1313_1755 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Clo1313_1756 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Clo1313_1749 Flagellar hook-length control protein-like, C-terminal domain K02414 fliK; flagellar hook-length control protein FliK D Clo1313_1758 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Clo1313_1757 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Clo1313_1748 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Clo1313_0207 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Clo1313_0208 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D Clo1313_0209 Flagellar protein FlgJ-like protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Clo1313_1746 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Clo1313_2916 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Clo1313_2917 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Clo1313_2915 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Clo1313_2909 flagellin domain protein K02406 fliC; flagellin D Clo1313_2910 flagellin domain protein K02406 fliC; flagellin D Clo1313_2891 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Clo1313_2890 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Clo1313_1725 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Clo1313_0056 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clo1313_0057 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Clo1313_2913 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW D Clo1313_2919 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Clo1313_2892 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Clo1313_1745 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD D Clo1313_1734 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D Clo1313_1733 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Clo1313_1107 twitching motility protein K02669 pilT; twitching motility protein PilT D Clo1313_1972 twitching motility protein K02669 pilT; twitching motility protein PilT D Clo1313_1109 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clo1313_1110 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clo1313_1106 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Clo1313_1367 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Clo1313_1108 Type II secretion system F domain K02653 pilC; type IV pilus assembly protein PilC D Clo1313_0919 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clo1313_1368 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clo1313_0276 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Clo1313_1569 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Clo1313_1692 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Clo1313_0914 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clo1313_1599 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins [BR:ctx03037] D Clo1313_2041 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 C 04812 Cytoskeleton proteins [BR:ctx04812] D Clo1313_1093 AMMECR1 domain protein K06990 MEMO1; MEMO1 family protein D Clo1313_0206 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clo1313_2143 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clo1313_1775 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clo1313_1776 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Clo1313_2139 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Clo1313_2138 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Clo1313_2137 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Clo1313_0007 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Clo1313_0008 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clo1313_3025 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ctx04147] D Clo1313_1687 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG D Clo1313_2090 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clo1313_2095 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clo1313_2094 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clo1313_1466 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Clo1313_0433 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clo1313_0933 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clo1313_2015 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clo1313_1542 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clo1313_0319 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clo1313_0883 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Clo1313_1878 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_1160 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clo1313_1024 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_0677 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_2099 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clo1313_1057 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Clo1313_0466 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Clo1313_0908 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clo1313_2055 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clo1313_2054 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clo1313_2854 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Clo1313_0073 Carbohydrate kinase, FGGY-like protein K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clo1313_1357 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2031 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2038 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_2303 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clo1313_0112 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Clo1313_0586 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clo1313_1012 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clo1313_2093 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clo1313_0813 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ctx02048] D Clo1313_2970 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Clo1313_2969 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Clo1313_0764 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Clo1313_2972 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Clo1313_2974 CRISPR-associated autoregulator, DevR family K19075 cst2; CRISPR-associated protein Cst2 D Clo1313_0765 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Clo1313_2971 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Clo1313_2973 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t D Clo1313_2976 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Clo1313_0750 CRISPR-associated protein TM1802-like protein K19114 csh1; CRISPR-associated protein Csh1 D Clo1313_0757 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10 D Clo1313_2710 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10 D Clo1313_2711 protein of unknown function DUF324 K09002 csm3; CRISPR-associated protein Csm3 D Clo1313_2274 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D Clo1313_2275 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clo1313_0478 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D Clo1313_0480 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Clo1313_2408 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Clo1313_0290 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Clo1313_0289 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Clo1313_2225 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Clo1313_2160 phage shock protein C, PspC K03973 pspC; phage shock protein C D Clo1313_1156 phage shock protein C, PspC K03973 pspC; phage shock protein C D Clo1313_2372 hypothetical protein K19165 phd; antitoxin Phd D Clo1313_1775 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clo1313_0206 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clo1313_2143 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clo1313_1150 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clo1313_1503 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ctx01504] D Clo1313_0731 hypothetical protein K18845 rmt; 16S rRNA (guanine(1405)-N(7))-methyltransferase [EC:2.1.1.179] D Clo1313_2201 small GTP-binding protein K18220 tetM; ribosomal protection tetracycline resistance protein D Clo1313_2943 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein D Clo1313_1844 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_0680 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_0697 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_2484 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Clo1313_2485 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_0696 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_1845 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clo1313_1091 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Clo1313_2572 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ctx00537] D Clo1313_1466 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ctx03100] D Clo1313_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clo1313_R0026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clo1313_R0071 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clo1313_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clo1313_R0011 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clo1313_R0051 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clo1313_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clo1313_R0029 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clo1313_R0038 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clo1313_R0022 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clo1313_R0059 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clo1313_R0056 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clo1313_R0048 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clo1313_R0031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clo1313_R0009 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clo1313_R0021 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clo1313_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clo1313_R0054 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0062 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0057 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clo1313_R0049 tRNA-His K14226 tRNA-His; tRNA His D Clo1313_R0014 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clo1313_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0006 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clo1313_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clo1313_R0047 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clo1313_R0046 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clo1313_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met D Clo1313_R0039 tRNA-Met K14230 tRNA-Met; tRNA Met D Clo1313_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Clo1313_R0008 tRNA-Met K14230 tRNA-Met; tRNA Met D Clo1313_R0035 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clo1313_R0058 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clo1313_R0067 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clo1313_R0055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clo1313_R0042 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clo1313_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clo1313_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clo1313_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clo1313_R0068 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clo1313_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clo1313_R0065 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clo1313_R0061 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clo1313_R0032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clo1313_R0041 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Clo1313_R0024 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clo1313_R0034 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clo1313_R0066 tRNA-Val K14237 tRNA-Val; tRNA Val D Clo1313_R0060 tRNA-Val K14237 tRNA-Val; tRNA Val D Clo1313_R0010 tRNA-Val K14237 tRNA-Val; tRNA Val D Clo1313_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Clo1313_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0072 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clo1313_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clo1313_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clo1313_R0064 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Clo1313_R0040 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Clo1313_R0012 ssrA; tmRNA as predicted by Rfam (RF00023), score 196.10 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Clo1313_1289 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D Clo1313_2130 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D Clo1313_1616 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Clo1313_1615 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Clo1313_2637 alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Clo1313_2228 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Clo1313_2638 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Clo1313_1883 ferredoxin K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D Clo1313_1885 NADH-quinone oxidoreductase, E subunit K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3] D Clo1313_1882 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D Clo1313_1881 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D Clo1313_2215 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2] D Clo1313_1848 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Clo1313_1102 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Clo1313_2221 hypothetical protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Clo1313_1579 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clo1313_1716 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clo1313_1094 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clo1313_2344 (Formate-C-acetyltransferase)-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clo1313_0634 rRNA (guanine-N(2)-)-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Clo1313_0282 galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D Clo1313_1039 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Clo1313_1078 transglutaminase domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Clo1313_0665 glycosidase related protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D Clo1313_0283 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Clo1313_0293 polysaccharide pyruvyl transferase CsaB K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Clo1313_1853 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Clo1313_1233 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Clo1313_1676 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Clo1313_2458 DNA integrity scanning, DisA, linker region K07067 disA; diadenylate cyclase [EC:2.7.7.85] D Clo1313_1095 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Clo1313_2112 anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D Clo1313_2121 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Clo1313_2463 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Clo1313_2715 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Clo1313_2925 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Clo1313_0998 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Clo1313_0271 stage II sporulation protein E, protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D Clo1313_0886 Protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Clo1313_0243 Protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Clo1313_0336 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Clo1313_1365 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Clo1313_2931 phosphoesterase RecJ domain protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D Clo1313_1143 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Clo1313_2753 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Clo1313_2635 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clo1313_2530 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clo1313_0522 glycoside hydrolase family 11 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clo1313_2777 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clo1313_0177 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clo1313_1305 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clo1313_2022 glycoside hydrolase family 16 K01216 bglS; licheninase [EC:3.2.1.73] D Clo1313_0849 glycosyl hydrolase 53 domain protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D Clo1313_2216 alpha-L-arabinofuranosidase B K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D Clo1313_0563 Carbohydrate binding family 6 K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136] D Clo1313_0851 Dockerin type 1 K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155] D Clo1313_2747 glycoside hydrolase family 48 K20829 celS; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.176] D Clo1313_2380 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_0370 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clo1313_1670 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Clo1313_2576 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clo1313_0521 glycoside hydrolase family 11 K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clo1313_1139 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D Clo1313_0387 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Clo1313_1159 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clo1313_1076 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clo1313_1976 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clo1313_2785 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clo1313_0183 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Clo1313_2630 UV-endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D Clo1313_0287 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Clo1313_1983 Carbohydrate binding family 6 K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23] D Clo1313_2755 Protein of unknown function DUF2600 K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130] D Clo1313_2533 PP-loop domain protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Clo1313_1852 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Clo1313_0655 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Clo1313_2877 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Clo1313_0062 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Clo1313_0061 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Clo1313_0066 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Clo1313_2591 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clo1313_0255 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clo1313_1985 cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Clo1313_0523 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D Clo1313_0063 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Clo1313_0064 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Clo1313_0065 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Clo1313_1502 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Clo1313_2334 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB D Clo1313_0575 NADH/Ubiquinone/plastoquinone (complex I) K14086 echA; ech hydrogenase subunit A D Clo1313_0574 respiratory-chain NADH dehydrogenase subunit 1 K14087 echB; ech hydrogenase subunit B D Clo1313_0573 NADH ubiquinone oxidoreductase 20 kDa subunit K14088 echC; ech hydrogenase subunit C D Clo1313_0572 ech hydrogenase, subunit EchD, putative K14089 echD; ech hydrogenase subunit D D Clo1313_0571 NADH-ubiquinone oxidoreductase chain 49kDa K14090 echE; ech hydrogenase subunit E D Clo1313_0570 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K14091 echF; ech hydrogenase subunit F C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Clo1313_1429 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Clo1313_3013 cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase D Clo1313_1986 copper amine oxidase-like domain-containing protein K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D Clo1313_0253 ABC-1 domain-containing protein K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism D Clo1313_2235 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Clo1313_2545 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Clo1313_2626 Tex-like protein K06959 tex; protein Tex D Clo1313_0940 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A D Clo1313_0005 hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D Clo1313_0251 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein D Clo1313_1618 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Clo1313_1041 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Clo1313_2464 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator D Clo1313_0328 trigger factor K03545 tig; trigger factor D Clo1313_2488 Urease accessory protein UreF K03188 ureF; urease accessory protein D Clo1313_2487 urease accessory protein UreG K03189 ureG; urease accessory protein D Clo1313_2486 Urease accessory protein UreD K03190 ureD; urease accessory protein D Clo1313_0337 SsrA-binding protein K03664 smpB; SsrA-binding protein D Clo1313_0566 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Clo1313_0565 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Clo1313_0564 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Clo1313_1154 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE D Clo1313_0567 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Clo1313_1765 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Clo1313_2146 Negative regulator of genetic competence K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D Clo1313_2546 methylated-DNA/protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Clo1313_0599 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Clo1313_1465 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Clo1313_2005 SMC domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Clo1313_1464 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease D Clo1313_1761 DNA protecting protein DprA K04096 smf; DNA processing protein D Clo1313_1612 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Clo1313_2375 Integrase catalytic region K07482 K07482; transposase, IS30 family D Clo1313_0816 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_0827 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_0885 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_0644 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_2087 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_0662 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_1710 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_1375 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_1898 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_2585 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_2686 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Clo1313_1421 transposase mutator type K07493 K07493; putative transposase D Clo1313_1782 transposase mutator type K07493 K07493; putative transposase D Clo1313_1850 transposase mutator type K07493 K07493; putative transposase D Clo1313_1864 transposase mutator type K07493 K07493; putative transposase D Clo1313_1868 transposase mutator type K07493 K07493; putative transposase D Clo1313_2008 transposase mutator type K07493 K07493; putative transposase D Clo1313_0766 transposase mutator type K07493 K07493; putative transposase D Clo1313_0785 transposase mutator type K07493 K07493; putative transposase D Clo1313_0790 transposase mutator type K07493 K07493; putative transposase D Clo1313_2574 transposase mutator type K07493 K07493; putative transposase D Clo1313_2508 transposase mutator type K07493 K07493; putative transposase D Clo1313_2224 transposase mutator type K07493 K07493; putative transposase D Clo1313_0602 transposase mutator type K07493 K07493; putative transposase D Clo1313_0150 transposase mutator type K07493 K07493; putative transposase D Clo1313_1066 transposase mutator type K07493 K07493; putative transposase D Clo1313_1248 transposase mutator type K07493 K07493; putative transposase D Clo1313_1104 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Clo1313_1298 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Clo1313_1651 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Clo1313_1865 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Clo1313_1935 Integrase catalytic region K07497 K07497; putative transposase D Clo1313_0773 Integrase catalytic region K07497 K07497; putative transposase D Clo1313_2663 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Clo1313_2700 Integrase catalytic region K07497 K07497; putative transposase D Clo1313_2369 Integrase catalytic region K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Clo1313_2801 Uncharacterized protein family UPF0133 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Clo1313_0551 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Clo1313_1617 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth D Clo1313_0358 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D Clo1313_0019 pro-sigmaK processing inhibitor BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery D Clo1313_2188 Spore coat protein CotH K06330 cotH; spore coat protein H D Clo1313_1129 spore coat protein, CotS family K06331 cotI; spore coat protein I D Clo1313_1806 spore coat protein CotJB K06333 cotJB; spore coat protein JB D Clo1313_1807 manganese containing catalase K06334 cotJC; spore coat protein JC D Clo1313_1130 spore coat protein, CotS family K06337 cotS; spore coat-associated protein S D Clo1313_1128 glycosyl transferase group 1 K06338 cotSA; spore coat protein SA D Clo1313_3029 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein D Clo1313_2757 nucleoside recognition domain protein K06373 spmA; spore maturation protein A D Clo1313_2756 nucleoside recognition domain protein K06374 spmB; spore maturation protein B D Clo1313_2113 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Clo1313_2821 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Clo1313_1548 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M D Clo1313_0927 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D Clo1313_2594 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D Clo1313_1376 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D Clo1313_1377 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB D Clo1313_1378 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D Clo1313_1379 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD D Clo1313_1380 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE D Clo1313_1381 stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF D Clo1313_1382 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG D Clo1313_1383 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH D Clo1313_1193 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D Clo1313_0486 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Clo1313_2376 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Clo1313_2378 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Clo1313_0964 Recombinase K06400 spoIVCA; site-specific DNA recombinase D Clo1313_2109 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D Clo1313_2108 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D Clo1313_2106 stage V sporulation protein ae K06407 spoVAE; stage V sporulation protein AE D Clo1313_2107 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D Clo1313_1801 dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A D Clo1313_1800 dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B D Clo1313_0216 SpoVG family protein K06412 spoVG; stage V sporulation protein G D Clo1313_1054 SpoVR family protein K06415 spoVR; stage V sporulation protein R D Clo1313_1288 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Clo1313_1124 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Clo1313_2903 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D Clo1313_0727 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP) D Clo1313_2016 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clo1313_3012 hypothetical protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D Clo1313_1080 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor) D Clo1313_0031 sporulation peptidase YabG K06436 yabG; spore coat assemly protein D Clo1313_0091 peptidase U57 YabG K06436 yabG; spore coat assemly protein D Clo1313_1141 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein D Clo1313_1557 GerA spore germination protein K06295 gerKA; spore germination protein KA D Clo1313_1555 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Clo1313_2722 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Clo1313_2046 Lipoprotein LpqB, GerMN domain K06298 gerM; germination protein M D Clo1313_2614 Lipoprotein LpqB, GerMN domain K06298 gerM; germination protein M D Clo1313_2720 GerA spore germination protein K06310 yndD; spore germination protein D Clo1313_0047 germination protein YpeB K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D Clo1313_1208 GTP-binding protein TypA K06207 typA; GTP-binding protein D Clo1313_1812 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Clo1313_1142 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Clo1313_0953 PhoH family protein K07175 phoH2; PhoH-like ATPase D Clo1313_1052 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase C 99992 Structural proteins D Clo1313_2435 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Clo1313_2782 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D Clo1313_0671 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Clo1313_2980 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Clo1313_2249 hypothetical protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D Clo1313_2120 PHP domain protein K04477 ycdX; putative hydrolase D Clo1313_0866 Patatin K07001 K07001; NTE family protein D Clo1313_1705 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Clo1313_2848 ribonuclease BN K07058 K07058; membrane protein D Clo1313_1892 hypothetical protein K04750 phnB; PhnB protein D Clo1313_2243 hypothetical protein K01421 yhgE; putative membrane protein D Clo1313_0093 protein of unknown function DUF368 K08974 K08974; putative membrane protein C 99997 Function unknown D Clo1313_0784 Ankyrin K06867 K06867; uncharacterized protein D Clo1313_1312 Radical SAM domain protein K06871 K06871; uncharacterized protein D Clo1313_1822 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Clo1313_0051 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Clo1313_1937 hypothetical protein K06888 K06888; uncharacterized protein D Clo1313_2887 hypothetical protein K06889 K06889; uncharacterized protein D Clo1313_1945 protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Clo1313_2736 CoA-binding domain protein K06929 K06929; uncharacterized protein D Clo1313_2267 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Clo1313_1454 nucleic acid binding protein K06960 K06960; uncharacterized protein D Clo1313_1667 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein D Clo1313_2242 hypothetical protein K07003 K07003; uncharacterized protein D Clo1313_2012 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein D Clo1313_0967 amidohydrolase 2 K07045 K07045; uncharacterized protein D Clo1313_2691 amidohydrolase 2 K07045 K07045; uncharacterized protein D Clo1313_0173 amidohydrolase 2 K07045 K07045; uncharacterized protein D Clo1313_2204 Nucleotidyltransferase, predicted K07074 K07074; uncharacterized protein D Clo1313_1992 aldo/keto reductase K07079 K07079; uncharacterized protein D Clo1313_1103 permease K07089 K07089; uncharacterized protein D Clo1313_1042 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Clo1313_1043 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Clo1313_0167 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Clo1313_2014 metallophosphoesterase K07098 K07098; uncharacterized protein D Clo1313_2569 metallophosphoesterase K07098 K07098; uncharacterized protein D Clo1313_2828 metallophosphoesterase K07098 K07098; uncharacterized protein D Clo1313_0327 metallophosphoesterase K07099 K07099; uncharacterized protein D Clo1313_1097 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K07137 K07137; uncharacterized protein D Clo1313_2310 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 K07138; uncharacterized protein D Clo1313_1851 conserved hypothetical protein K07139 K07139; uncharacterized protein D Clo1313_3031 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Clo1313_0906 GatB/YqeY domain protein K09117 K09117; uncharacterized protein D Clo1313_0335 protein of unknown function DUF402 K09145 K09145; uncharacterized protein D Clo1313_2271 protein of unknown function DUF438 K09155 K09155; uncharacterized protein D Clo1313_1811 protein of unknown function DUF711 K09157 K09157; uncharacterized protein D Clo1313_1313 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein D Clo1313_2264 hypothetical protein K09700 K09700; uncharacterized protein D Clo1313_1668 protein of unknown function DUF116 K09729 K09729; uncharacterized protein D Clo1313_1724 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Clo1313_0041 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Clo1313_0729 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Clo1313_1653 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D Clo1313_1153 Protein of unknown function DUF2225 K09766 K09766; uncharacterized protein D Clo1313_2764 protein of unknown function DUF327 K09770 K09770; uncharacterized protein D Clo1313_1391 acid phosphatase/vanadium-dependent haloperoxidase related protein K09775 K09775; uncharacterized protein D Clo1313_2616 protein of unknown function DUF458 K09776 K09776; uncharacterized protein D Clo1313_2732 protein of unknown function DUF378 K09779 K09779; uncharacterized protein D Clo1313_1053 sporulation protein YhbH K09786 K09786; uncharacterized protein D Clo1313_1451 helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein D Clo1313_0266 GumN family protein K09973 K09973; uncharacterized protein D Clo1313_1987 hypothetical protein K01163 K01163; uncharacterized protein D Clo1313_2073 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein D Clo1313_0552 putative phosphate transport regulator K07220 K07220; uncharacterized protein D Clo1313_1223 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024