+D GENES KO #

  KEGG Orthology (KO) - Corynebacterium variabile

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cva00010] D CVAR_1140 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2] D CVAR_0678 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CVAR_1795 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CVAR_1921 pfkB; fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CVAR_0399 fda; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CVAR_1481 tpi; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CVAR_1483 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CVAR_1851 gapB; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CVAR_1482 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CVAR_2749 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CVAR_2008 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CVAR_1215 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CVAR_0589 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CVAR_1084 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CVAR_0936 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CVAR_0937 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CVAR_0938 phdC; pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CVAR_1123 sucB; dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2864 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CVAR_0155 adhA1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0791 adhA2; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_1117 adhA4; alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CVAR_0116 aldA; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CVAR_1259 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CVAR_1579 ppgK; polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CVAR_0267 pck; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CVAR_0388 nagE; PTS system N-acetylglucosamine-specific component II K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:cva00020] D CVAR_0632 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CVAR_1455 acn; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CVAR_2249 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CVAR_1853 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_0587 cat2; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CVAR_0586 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CVAR_2762 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CVAR_2761 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CVAR_2763 succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CVAR_1922 fum; Fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CVAR_0899 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CVAR_1651 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CVAR_0553 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CVAR_0267 pck; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CVAR_1084 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CVAR_0936 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CVAR_0937 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CVAR_0938 phdC; pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CVAR_1123 sucB; dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cva00030] D CVAR_0678 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CVAR_1476 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CVAR_1478 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CVAR_1307 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CVAR_3043 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CVAR_1474 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CVAR_1475 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CVAR_0823 rpi; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CVAR_2755 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CVAR_3010 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CVAR_2017 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CVAR_0583 putative carbohydrate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CVAR_2949 putative carbohydrate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CVAR_2950 gntK; gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CVAR_0399 fda; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CVAR_1921 pfkB; fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CVAR_1795 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cva00040] D CVAR_0324 udgA1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CVAR_2068 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CVAR_3043 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CVAR_1683 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] C 00051 Fructose and mannose metabolism [PATH:cva00051] D CVAR_2177 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CVAR_2178 pmmA; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CVAR_2213 pmmB; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CVAR_2182 manC; mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CVAR_1795 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CVAR_1921 pfkB; fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CVAR_1686 mtlD; mannitol 2-dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D CVAR_0399 fda; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CVAR_1481 tpi; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CVAR_0823 rpi; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CVAR_2115 ptsF; PTS system fructose-specific component II K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:cva00052] D CVAR_1259 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CVAR_1263 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CVAR_1262 UDP-glucose-hexose-1-phosphateuridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CVAR_1589 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CVAR_2068 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CVAR_1140 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2] D CVAR_0225 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CVAR_1795 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CVAR_1864 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CVAR_0686 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:cva00053] D CVAR_0324 udgA1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:cva00500] D CVAR_1864 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CVAR_0686 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CVAR_2068 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CVAR_2943 bglB; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D CVAR_0682 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CVAR_0681 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CVAR_0683 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CVAR_0388 nagE; PTS system N-acetylglucosamine-specific component II K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CVAR_0680 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68] D CVAR_0527 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CVAR_0526 otsB; trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D CVAR_2764 hypothetical protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D CVAR_1140 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2] D CVAR_0678 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cva00520] D CVAR_0301 putative secreted protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CVAR_0388 nagE; PTS system N-acetylglucosamine-specific component II K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CVAR_2295 glmS; glucosamine-fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CVAR_2299 pmmC; Phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CVAR_2016 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CVAR_0595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CVAR_2752 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CVAR_1140 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2] D CVAR_1579 ppgK; polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CVAR_2068 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CVAR_0324 udgA1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CVAR_1263 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CVAR_1262 UDP-glucose-hexose-1-phosphateuridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CVAR_1589 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CVAR_0225 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CVAR_0678 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CVAR_2177 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CVAR_2178 pmmA; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CVAR_2213 pmmB; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CVAR_2182 manC; mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CVAR_0682 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cva00620] D CVAR_1084 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CVAR_0936 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CVAR_0937 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CVAR_0938 phdC; pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CVAR_1123 sucB; dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_0155 adhA1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0791 adhA2; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_1117 adhA4; alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CVAR_0456 ack; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CVAR_0455 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CVAR_1215 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CVAR_2208 accBC1; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_0607 accBC3; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_2518 accBC2; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_1725 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CVAR_0116 aldA; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CVAR_0587 cat2; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CVAR_0586 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CVAR_0548 lldD1; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D CVAR_1081 lldD2; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D CVAR_2864 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CVAR_0825 pqo; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D CVAR_1459 lldA; lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D CVAR_1383 dld1; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D CVAR_1388 dld2; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D CVAR_1899 dld3; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D CVAR_0354 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CVAR_3072 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CVAR_0553 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CVAR_0899 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CVAR_1651 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CVAR_1922 fum; Fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CVAR_1480 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CVAR_0267 pck; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CVAR_0589 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CVAR_2766 aceB; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2506 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cva00630] D CVAR_2767 aceA; Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D CVAR_2766 aceB; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D CVAR_0899 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CVAR_0632 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CVAR_1455 acn; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2517 accD2; acyl-CoA carboxylase complex subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D CVAR_2208 accBC1; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_0607 accBC3; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_2518 accBC2; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_1428 oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D CVAR_1429 oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D CVAR_2491 katA; Catalase K03781 katE; catalase [EC:1.11.1.6] D CVAR_1090 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CVAR_1097 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1118 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1937 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CVAR_0391 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CVAR_0392 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_0393 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CVAR_1755 putative endonuclease K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D CVAR_0987 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CVAR_1853 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CVAR_0895 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:cva00640] D CVAR_0456 ack; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CVAR_0455 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2774 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_2208 accBC1; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_0607 accBC3; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_2518 accBC2; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_0951 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2953 gabT2; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2517 accD2; acyl-CoA carboxylase complex subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D CVAR_0996 hypothetical protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CVAR_0554 prpC; methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D CVAR_0556 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D CVAR_0555 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D CVAR_2864 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CVAR_0097 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:cva00650] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1045 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CVAR_0709 fadB3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CVAR_1037 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_2762 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CVAR_2761 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CVAR_2763 succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CVAR_2979 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CVAR_0951 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2953 gabT2; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_0908 gabD3; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0952 gabD1; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0958 gabD6; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0989 gabD5; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2682 gabD2; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2958 gabD4; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_1945 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0587 cat2; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CVAR_0586 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CVAR_1984 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D CVAR_2086 scoA; 3-oxoacid CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CVAR_3067 pcaI; 3-oxoadipate CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CVAR_2085 scoB; 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CVAR_0894 pcaJ; 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CVAR_1781 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CVAR_1780 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CVAR_0273 alsD; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D CVAR_1004 hypothetical protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D CVAR_1756 hypothetical protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:cva00660] D CVAR_1781 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CVAR_1780 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CVAR_0273 alsD; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D CVAR_1750 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CVAR_1749 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CVAR_1228 hypothetical protein K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CVAR_1770 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cva00562] D CVAR_1206 impA; inositol monophosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CVAR_1578 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CVAR_3002 ino; Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CVAR_0996 hypothetical protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CVAR_1481 tpi; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cva00190] D CVAR_1312 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CVAR_2762 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CVAR_2761 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CVAR_2763 succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CVAR_1134 qcrA; ubiquinol-cytochrome C reductase iron-sulfur protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CVAR_1135 ubiquinol-cytochrome C reductase cytochrome B subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D CVAR_1133 qcrC; ubiquinol-cytochrome C reductase cytochrome C subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D CVAR_1473 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CVAR_1130 ctaF; cytochrome C oxidase subunit K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D CVAR_1132 ctaE; cytochrome C oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D CVAR_0193 ctaD2; cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CVAR_0724 ctaD1; cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CVAR_0740 ctaD3; cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CVAR_1129 ctaC; cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D CVAR_1472 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CVAR_0188 cydA; cytochrome bd-type menaquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CVAR_0187 cydB; cytochrome bd-type menaquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CVAR_1826 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CVAR_1824 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CVAR_1825 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CVAR_1827 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CVAR_1823 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CVAR_1830 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CVAR_1828 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CVAR_1829 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CVAR_0479 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CVAR_2037 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CVAR_0475 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cva00680] D CVAR_1937 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CVAR_2008 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CVAR_1480 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CVAR_0899 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CVAR_0399 fda; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CVAR_1921 pfkB; fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CVAR_1795 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CVAR_0456 ack; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CVAR_0455 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CVAR_0589 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CVAR_2749 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CVAR_1777 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CVAR_0631 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CVAR_0725 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:cva00910] D CVAR_2362 narT; nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CVAR_2364 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D CVAR_2365 nirD; nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D CVAR_2582 hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CVAR_1718 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CVAR_1097 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1118 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1493 gltB2; glutamate synthase subunit aplpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CVAR_2900 gltB; glutamate synthase subunit aplpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CVAR_2899 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CVAR_0508 bca; beta-type carbonic anhydrase-like protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cva00920] D CVAR_2259 susA; sulfate ABC transport system substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CVAR_2258 susB; sulfate ABC transport system permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein D CVAR_2257 susC; sulfate ABC transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein D CVAR_2256 susD; sulfate ABC transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CVAR_0010 tauB; taurine ABC transport system substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CVAR_0009 tauC; taurine ABC transport system permease protein K15552 tauC; taurine transport system permease protein D CVAR_0011 tauA; taurine ABC transport system ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CVAR_0008 tauD1; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D CVAR_0646 putative secreted protein K00299 ssuE; FMN reductase [EC:1.5.1.38] D CVAR_0452 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CVAR_0451 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CVAR_0652 cysQ; inositol-1-monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CVAR_3042 cysH; adenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CVAR_1494 cysJ; sulfite reductase NADPH flavoprotein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D CVAR_2363 narB; nitrate reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D CVAR_0448 cysI; sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D CVAR_2207 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_0387 sseB1; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_1001 sseB2; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_0592 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CVAR_0311 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CVAR_2255 cysK2; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CVAR_0593 cysK1; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CVAR_0603 putative cysteine synthase/cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CVAR_2251 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CVAR_1331 putative acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CVAR_0151 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CVAR_2642 fadD12; acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cva00061] D CVAR_2208 accBC1; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_0607 accBC3; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_2518 accBC2; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_1083 putative acyl carrier protein K02078 acpP; acyl carrier protein D CVAR_2516 fas; fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CVAR_1785 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_1233 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_2643 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_2036 fadD8; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_0227 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_1053 fadD9; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation [PATH:cva00062] D CVAR_1037 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00071 Fatty acid degradation [PATH:cva00071] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_1037 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_2774 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D CVAR_0504 fadE2; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D CVAR_0420 fadE3; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D CVAR_0943 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CVAR_2036 fadD8; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_0227 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_1053 fadD9; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_0139 alkB; alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D CVAR_0135 ferredoxin-NAD+ reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CVAR_0113 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CVAR_0155 adhA1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0791 adhA2; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cva00561] D CVAR_0987 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CVAR_1117 adhA4; alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CVAR_0097 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CVAR_2209 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CVAR_1265 hypothetical protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D CVAR_1141 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CVAR_0180 hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CVAR_2771 putative secreted protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CVAR_0244 cmtC; trehalose corynomycolyl transferase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CVAR_0541 lip3; triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:cva00564] D CVAR_1747 gpsA; Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CVAR_0179 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CVAR_1141 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CVAR_0180 hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CVAR_0032 glpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CVAR_3077 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CVAR_1699 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CVAR_1557 Phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CVAR_1625 pgsA2; Phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CVAR_1989 hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D CVAR_0463 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism D CVAR_3057 putative flavoprotein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] C 00600 Sphingolipid metabolism [PATH:cva00600] D CVAR_1079 putative secreted protein K12349 ASAH2; neutral ceramidase [EC:3.5.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:cva00592] D CVAR_2774 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] C 01040 Biosynthesis of unsaturated fatty acids [PATH:cva01040] D CVAR_2721 hypothetical protein K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D CVAR_2720 hypothetical protein K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D CVAR_2774 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D CVAR_1552 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cva00230] D CVAR_2017 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CVAR_2341 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CVAR_0543 Phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CVAR_2103 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CVAR_0437 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CVAR_0566 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D CVAR_0564 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D CVAR_0565 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CVAR_0571 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CVAR_2201 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CVAR_2200 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CVAR_0561 purC; phosphoribosylaminoimidazole-succinocarboxamidesynthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CVAR_0549 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CVAR_2102 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CVAR_1540 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CVAR_2212 deoD; purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D CVAR_1166 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CVAR_0416 inosine-uridine preferring nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D CVAR_2285 hypothetical protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CVAR_2286 guaB; inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CVAR_0918 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CVAR_0736 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CVAR_2577 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D CVAR_2578 xdhB; xanthine dehydrogenase large subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D CVAR_2283 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CVAR_2663 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D CVAR_1503 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CVAR_0218 nrdE1; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CVAR_0720 nrdE2; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CVAR_0850 nrdF3; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CVAR_0722 nrdF2; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CVAR_0222 nrdF1; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CVAR_1071 hypothetical protein K01129 dgt; dGTPase [EC:3.1.5.1] D CVAR_1539 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CVAR_2005 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CVAR_2745 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CVAR_2445 cya; adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CVAR_0408 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CVAR_2234 hypothetical protein K01488 add; adenosine deaminase [EC:3.5.4.4] D CVAR_2333 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CVAR_1558 hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D CVAR_0452 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CVAR_0451 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CVAR_2631 hypothetical protein K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D CVAR_2661 hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D CVAR_0634 hypothetical protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D CVAR_2662 hypothetical protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D CVAR_2625 glutamate racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D CVAR_2629 hypothetical protein K01466 allB; allantoinase [EC:3.5.2.5] D CVAR_2630 hypothetical protein K01477 alc; allantoicase [EC:3.5.3.4] D CVAR_2593 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CVAR_2594 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D CVAR_2596 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:cva00240] D CVAR_1506 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CVAR_1507 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CVAR_1509 pyrB; aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CVAR_1508 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CVAR_1448 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CVAR_0395 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CVAR_1505 pyrF; orotidine-5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CVAR_1701 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CVAR_0918 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CVAR_2206 hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CVAR_1274 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CVAR_1281 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CVAR_2215 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CVAR_1510 pyrR; PyrR DNA-binding transcription regulator K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CVAR_0102 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CVAR_2648 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CVAR_0323 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CVAR_0218 nrdE1; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CVAR_0720 nrdE2; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CVAR_0850 nrdF3; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CVAR_0722 nrdF2; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CVAR_0222 nrdF1; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CVAR_2173 tmk; thymidilate synthase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CVAR_1575 dut1; deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CVAR_0847 dut2; deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CVAR_0103 deoA; Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D CVAR_0651 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CVAR_1631 thyX2; probable thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CVAR_0854 thyX1; probable thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CVAR_1015 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cva00250] D CVAR_2622 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CVAR_1128 ltsA; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CVAR_0328 alaT; alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CVAR_1326 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CVAR_1434 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CVAR_2507 putative fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CVAR_1255 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CVAR_1256 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CVAR_0408 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CVAR_0549 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CVAR_1509 pyrB; aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CVAR_2979 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CVAR_0951 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2953 gabT2; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_0908 gabD3; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0952 gabD1; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0958 gabD6; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0989 gabD5; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2682 gabD2; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2958 gabD4; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_1945 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_1493 gltB2; glutamate synthase subunit aplpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CVAR_2900 gltB; glutamate synthase subunit aplpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CVAR_2899 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CVAR_1718 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CVAR_0183 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CVAR_1097 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1118 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1506 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CVAR_1507 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CVAR_1223 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CVAR_0565 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CVAR_2295 glmS; glucosamine-fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CVAR_2341 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cva00260] D CVAR_2500 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CVAR_2499 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CVAR_1840 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CVAR_1839 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CVAR_1529 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CVAR_1937 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CVAR_0987 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CVAR_2749 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CVAR_1777 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CVAR_0631 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CVAR_0725 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CVAR_0391 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CVAR_0392 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_0393 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CVAR_2656 D-aspartate oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D CVAR_1534 betA1; choline dehydrogenase K17755 codA; choline oxidase [EC:1.1.3.17] D CVAR_1535 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D CVAR_2044 hypothetical protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D CVAR_2045 hypothetical protein K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D CVAR_2042 hypothetical protein K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10] D CVAR_2040 solA2; putative sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D CVAR_1034 solA1; putative sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D CVAR_2047 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CVAR_1803 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CVAR_1213 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CVAR_1212 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cva00270] D CVAR_0592 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CVAR_0311 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CVAR_2255 cysK2; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CVAR_0593 cysK1; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CVAR_0603 putative cysteine synthase/cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CVAR_1048 aecD; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CVAR_1284 metH; 5-methyltetrahydrofolate-homocysteinemethyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D CVAR_0431 metE1; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CVAR_0598 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CVAR_0599 metE2; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CVAR_1500 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CVAR_2342 hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CVAR_1166 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CVAR_2973 putative amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CVAR_2693 DNA cytosine-5-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CVAR_2174 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CVAR_2500 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CVAR_2499 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CVAR_1840 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CVAR_2251 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CVAR_1331 putative acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CVAR_0151 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CVAR_2250 metY; O-acetylhomoserine lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CVAR_1125 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CVAR_2207 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_0387 sseB1; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_1001 sseB2; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_2864 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CVAR_0899 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CVAR_2047 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CVAR_1777 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CVAR_0631 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:cva00280] D CVAR_1125 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_0504 fadE2; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D CVAR_0420 fadE3; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D CVAR_2090 acyl-CoA dehydrogenase domain-containing protein K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_1037 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D CVAR_2517 accD2; acyl-CoA carboxylase complex subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D CVAR_2208 accBC1; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_0607 accBC3; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_2518 accBC2; acyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CVAR_0996 hypothetical protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CVAR_0951 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2953 gabT2; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2091 acyl-CoA carboxylase alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D CVAR_2092 acyl-CoA decarboxylase alpha subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D CVAR_2086 scoA; 3-oxoacid CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CVAR_3067 pcaI; 3-oxoadipate CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CVAR_2085 scoB; 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CVAR_0894 pcaJ; 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1984 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cva00290] D CVAR_1803 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CVAR_1750 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CVAR_1749 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CVAR_1228 hypothetical protein K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CVAR_1770 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CVAR_1781 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CVAR_1780 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CVAR_1779 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CVAR_1784 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CVAR_1125 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CVAR_0328 alaT; alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CVAR_1326 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CVAR_2506 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cva00300] D CVAR_1840 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CVAR_2500 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CVAR_2499 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CVAR_1630 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CVAR_1632 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CVAR_1871 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CVAR_1252 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CVAR_0600 hypothetical protein K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CVAR_1869 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CVAR_1607 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CVAR_1841 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CVAR_1679 pdxR; GntR-family transcription regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D CVAR_1157 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CVAR_1158 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cva00310] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_0943 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_1037 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0951 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2953 gabT2; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_0908 gabD3; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0952 gabD1; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0958 gabD6; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0989 gabD5; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2682 gabD2; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2958 gabD4; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_1945 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:cva00220] D CVAR_1253 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CVAR_1255 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CVAR_1256 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CVAR_2593 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CVAR_2594 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D CVAR_2596 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D CVAR_1223 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CVAR_0565 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CVAR_1097 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1118 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1718 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CVAR_0328 alaT; alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CVAR_1326 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CVAR_1250 N-acetylglutamate-acetylornithineacetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CVAR_0465 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D CVAR_1251 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CVAR_1249 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CVAR_1252 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cva00330] D CVAR_2653 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D CVAR_2648 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CVAR_2956 puo; putrescine oxidase K03343 puo; putrescine oxidase [EC:1.4.3.10] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CVAR_1317 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_0205 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_0280 putative oxidoreductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CVAR_2743 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CVAR_0183 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CVAR_0925 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CVAR_0926 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D CVAR_2656 D-aspartate oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00340 Histidine metabolism [PATH:cva00340] D CVAR_1435 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CVAR_1436 hisEC; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CVAR_1208 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CVAR_1205 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CVAR_1204 hisH; Glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CVAR_1207 hisF; imidazoleglycerol-phosphate synthase cyclase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CVAR_1202 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CVAR_1201 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_2566 aroT; aromatic amino acid aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_0679 hypothetical protein K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D CVAR_1200 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:cva00350] D CVAR_1201 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_2566 aroT; aromatic amino acid aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_0155 adhA1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0791 adhA2; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0908 gabD3; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0952 gabD1; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0958 gabD6; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0989 gabD5; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2682 gabD2; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2958 gabD4; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_1945 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0513 fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism [PATH:cva00360] D CVAR_1935 echA1; enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_1045 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CVAR_0709 fadB3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CVAR_1201 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_2566 aroT; aromatic amino acid aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_2163 katG; catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D CVAR_1317 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_0205 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_0135 ferredoxin-NAD+ reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CVAR_0113 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:cva00380] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_0943 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_1037 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CVAR_1317 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_0205 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_2491 katA; Catalase K03781 katE; catalase [EC:1.11.1.6] D CVAR_2163 katG; catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cva00400] D CVAR_1145 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CVAR_1515 aroB; 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D CVAR_1514 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CVAR_2160 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CVAR_1516 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CVAR_1209 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CVAR_1131 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CVAR_1205 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CVAR_1211 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CVAR_1213 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CVAR_1212 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CVAR_2111 csm; Chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D CVAR_2555 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CVAR_3044 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D CVAR_1201 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_2566 aroT; aromatic amino acid aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cva00410] D CVAR_0493 panD1; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CVAR_2846 panD2; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CVAR_2979 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CVAR_0951 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2953 gabT2; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_1681 putative aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D CVAR_0997 putative aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CVAR_0492 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CVAR_1015 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_2774 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D CVAR_0996 hypothetical protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:cva00430] D CVAR_2979 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CVAR_1681 putative aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D CVAR_0997 putative aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D CVAR_0455 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CVAR_0456 ack; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cva00450] D CVAR_0151 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CVAR_1048 aecD; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CVAR_0431 metE1; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CVAR_0598 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CVAR_0599 metE2; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CVAR_1464 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CVAR_3026 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CVAR_0452 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CVAR_0451 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CVAR_2058 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cva00460] D CVAR_2943 bglB; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D CVAR_1937 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cva00470] D CVAR_1746 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CVAR_1223 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CVAR_0565 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CVAR_0733 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CVAR_1160 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CVAR_2622 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CVAR_1607 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CVAR_1841 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CVAR_2656 D-aspartate oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00480 Glutathione metabolism [PATH:cva00480] D CVAR_0609 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CVAR_0471 hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D CVAR_1124 pepB1; putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CVAR_1866 pepB2; putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CVAR_0808 Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CVAR_2249 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CVAR_1307 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CVAR_1476 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CVAR_2980 gpx; Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:cva00515] D CVAR_2062 putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:cva00514] D CVAR_2062 putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:cva00542] D CVAR_1833 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cva00541] D CVAR_2068 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CVAR_1589 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CVAR_0225 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CVAR_0324 udgA1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CVAR_2718 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CVAR_2724 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CVAR_2719 rmlC; dTDP-4-dehydrorhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CVAR_2184 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CVAR_2177 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CVAR_2178 pmmA; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CVAR_2213 pmmB; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CVAR_2016 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cva00550] D CVAR_0595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CVAR_2752 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CVAR_1163 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CVAR_1160 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CVAR_1157 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CVAR_1746 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CVAR_1158 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CVAR_1064 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CVAR_1446 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CVAR_1159 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CVAR_1162 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CVAR_1156 ftsI; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CVAR_0063 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D CVAR_2235 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CVAR_0482 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CVAR_2509 hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D CVAR_2510 hypothetical protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cva00552] D CVAR_1446 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CVAR_1833 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cva00543] D CVAR_0317 hypothetical protein K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ D CVAR_1833 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CVAR_0592 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CVAR_0311 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cva00730] D CVAR_1995 thiC; thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CVAR_1309 thiD; hydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CVAR_1813 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CVAR_1109 thiO; glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D CVAR_1571 dxs; 1-deoxyxylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CVAR_1108 thiG; thiazole biosynthesis protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D CVAR_1311 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CVAR_3070 thiE2; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CVAR_1310 thiE1; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CVAR_1744 thiL; Thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CVAR_2161 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CVAR_0147 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CVAR_2333 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CVAR_2054 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:cva00740] D CVAR_1490 ribAB; GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CVAR_1492 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-5-phosphoribosylamino uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CVAR_1489 ribH; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CVAR_1491 ribC; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CVAR_1635 riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CVAR_0646 putative secreted protein K00299 ssuE; FMN reductase [EC:1.5.1.38] D CVAR_1311 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] C 00750 Vitamin B6 metabolism [PATH:cva00750] D CVAR_2654 pdxH; pyridoxine/pyridoxamine 5-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D CVAR_1324 putative phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CVAR_0631 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CVAR_1529 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CVAR_1553 pdxS; pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D CVAR_1551 pdxT; amidotransferase involved in pyridoxine biosynthesis K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cva00760] D CVAR_1182 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CVAR_1183 nadC; Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CVAR_0729 hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CVAR_2212 deoD; purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D CVAR_0929 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CVAR_2527 nadE; NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CVAR_1624 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CVAR_1936 pyrazinamidase / nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CVAR_2587 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CVAR_1268 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CVAR_1792 ald; Alanine dehydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D CVAR_1791 putative membrane protein K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D CVAR_0908 gabD3; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0952 gabD1; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0958 gabD6; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_0989 gabD5; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2682 gabD2; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_2958 gabD4; succinic-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CVAR_1945 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:cva00770] D CVAR_1781 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CVAR_1780 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CVAR_1779 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CVAR_1784 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CVAR_1096 panB; 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CVAR_1319 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CVAR_0492 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CVAR_1938 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CVAR_1501 dfp; phosphopantothenate cysteine ligase / 4-phospho-pantothenoyl-cysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CVAR_1736 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CVAR_1235 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CVAR_2515 acpS; 4-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CVAR_1125 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CVAR_1015 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CVAR_0493 panD1; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CVAR_2846 panD2; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:cva00780] D CVAR_1785 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_1233 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_2643 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_2406 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CVAR_1289 bioA; Adenosylmethionine-8-amino-7-oxononanoateaminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CVAR_1290 Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CVAR_1088 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CVAR_2203 birA; biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cva00785] D CVAR_1122 lipB; Lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CVAR_1121 lipA; putative lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CVAR_0780 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_1084 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CVAR_0936 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CVAR_0937 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CVAR_0938 phdC; pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CVAR_1123 sucB; dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CVAR_1853 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CVAR_0391 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CVAR_0392 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CVAR_0393 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cva00790] D CVAR_0485 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CVAR_0147 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CVAR_2451 putative secreted protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CVAR_0487 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CVAR_0488 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CVAR_0486 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CVAR_3047 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CVAR_0913 dihydrofolate synthase / folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CVAR_1490 ribAB; GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CVAR_0059 pabA; para-aminobenzoate synthetase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D CVAR_0590 pabAB; para-aminobenzoate synthase component I/II K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D CVAR_0574 pabC; aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CVAR_2358 moaA; molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CVAR_2350 moaC; molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CVAR_2348 moaE; molybdenum cofactor biosynthesis protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CVAR_2352 moeA2; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CVAR_2355 moeA3; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CVAR_2067 moeA1; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:cva00670] D CVAR_3047 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CVAR_2262 folD; methylenetetrahydrofolate dehydrogenase NADP+ / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CVAR_1937 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CVAR_2103 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CVAR_2102 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CVAR_1497 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CVAR_0392 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CVAR_0651 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CVAR_1631 thyX2; probable thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CVAR_0854 thyX1; probable thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CVAR_0895 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CVAR_1149 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CVAR_3075 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cva00860] D CVAR_1754 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_2544 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_2740 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CVAR_2731 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CVAR_2735 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CVAR_2739 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CVAR_2367 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CVAR_1568 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CVAR_1567 hemG; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CVAR_0658 hemH2; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CVAR_2494 hemH1; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CVAR_1566 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D CVAR_2738 hemD; uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CVAR_2366 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D CVAR_1650 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CVAR_1473 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CVAR_1472 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CVAR_1126 cobT; nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CVAR_1092 hypothetical protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D CVAR_1101 hmuO; Heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cva00130] D CVAR_2419 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CVAR_2028 entC1; Isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CVAR_1759 menF; Isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CVAR_2834 entC2; Isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CVAR_2422 menD; 2-oxoglutarate decarboxylase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D CVAR_2709 O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CVAR_2713 O-succinylbenzoic acid-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D CVAR_2710 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CVAR_1308 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D CVAR_2714 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CVAR_0037 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cva00900] D CVAR_1571 dxs; 1-deoxyxylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CVAR_1695 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CVAR_2050 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1984 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D CVAR_1983 mvaA; 3-hydroxy-3-methylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D CVAR_0902 mvaK1; Mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D CVAR_0904 mvaK2; phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D CVAR_0903 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D CVAR_0905 idi; isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CVAR_1148 idsA; Geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CVAR_1939 hypothetical protein K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CVAR_1064 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:cva00906] D CVAR_1461 hypothetical protein K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:cva00903] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CVAR_0330 putative alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:cva00907] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_2246 putative dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase D CVAR_1037 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CVAR_1474 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products [PATH:cva01057] D CVAR_0219 flavin reductase domain-containing protein K14631 actVB; flavin reductase ActVB [EC:1.5.1.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cva00523] D CVAR_2718 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CVAR_2724 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CVAR_2719 rmlC; dTDP-4-dehydrorhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CVAR_2184 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:cva01054] D CVAR_2622 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cva01053] D CVAR_2028 entC1; Isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CVAR_1759 menF; Isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CVAR_2834 entC2; Isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CVAR_2029 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D CVAR_2845 entE2; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D CVAR_2835 nrpS2; nonribosomal peptide synthetase K04788 mbtB; mycobactin phenyloxazoline synthetase C 01055 Biosynthesis of vancomycin group antibiotics D CVAR_2724 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:cva00946] D CVAR_2943 bglB; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D CVAR_2656 D-aspartate oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00332 Carbapenem biosynthesis [PATH:cva00332] D CVAR_0925 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CVAR_0926 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cva00261] D CVAR_2847 hypothetical protein K05375 mbtH; MbtH protein D CVAR_0452 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CVAR_0451 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CVAR_2500 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CVAR_2499 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CVAR_1630 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CVAR_1632 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cva00521] D CVAR_1140 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2] D CVAR_3002 ino; Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CVAR_1206 impA; inositol monophosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CVAR_1578 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CVAR_2718 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CVAR_2724 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CVAR_2719 rmlC; dTDP-4-dehydrorhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CVAR_2184 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CVAR_1140 glk; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cva00525] D CVAR_2718 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CVAR_2724 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cva00401] D CVAR_2555 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CVAR_1201 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_2566 aroT; aromatic amino acid aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CVAR_1209 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D CVAR_1785 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_1233 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_2643 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CVAR_1083 putative acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:cva00999] D CVAR_1500 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CVAR_2943 bglB; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cva00362] D CVAR_0896 pcaL; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_0943 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_1045 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CVAR_0709 fadB3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:cva00627] D CVAR_1317 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_0205 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_1725 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CVAR_2696 vanA; vanillate monooxygenase K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D CVAR_2695 vanB; vanillate monooxygenase K03863 vanB; vanillate monooxygenase ferredoxin subunit D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:cva00625] D CVAR_0155 adhA1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0791 adhA2; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0341 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:cva00633] D CVAR_2934 hypothetical protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D CVAR_0304 hypothetical protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:cva00643] D CVAR_1317 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CVAR_0205 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation D CVAR_2593 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CVAR_2594 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D CVAR_2596 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:cva00930] D CVAR_0139 alkB; alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D CVAR_0330 putative alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D CVAR_3049 echA3; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CVAR_0287 fadB1; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CVAR_1037 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:cva00626] D CVAR_0155 adhA1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CVAR_0791 adhA2; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation D CVAR_1073 putative oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cva03020] D CVAR_2408 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CVAR_2407 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CVAR_2327 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CVAR_1502 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D CVAR_0611 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cva03010] D CVAR_1229 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CVAR_1703 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CVAR_2388 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CVAR_2328 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CVAR_2337 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CVAR_3000 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CVAR_2404 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CVAR_2340 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CVAR_2300 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CVAR_2395 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CVAR_2329 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CVAR_2405 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CVAR_2330 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CVAR_2077 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CVAR_1634 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CVAR_1719 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CVAR_2385 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CVAR_2078 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CVAR_2390 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CVAR_0960 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CVAR_2413 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CVAR_2391 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CVAR_2394 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CVAR_2393 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CVAR_2368 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CVAR_2339 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CVAR_2410 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CVAR_2998 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CVAR_2411 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CVAR_2414 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CVAR_2301 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CVAR_2370 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CVAR_2335 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CVAR_2387 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CVAR_2326 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CVAR_2338 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CVAR_1713 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CVAR_1245 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CVAR_0921 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CVAR_2389 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CVAR_2392 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CVAR_2369 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CVAR_2018 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CVAR_0922 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CVAR_2075 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CVAR_2386 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CVAR_2336 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CVAR_2074 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CVAR_2073 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CVAR_2076 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CVAR_3041 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CVAR_1244 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CVAR_0716 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CVAR_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r18 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r16 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r15 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cva00970] D CVAR_t002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CVAR_t003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CVAR_t013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CVAR_t014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CVAR_t054 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t058 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t023 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CVAR_t010 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CVAR_t011 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CVAR_t032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CVAR_t037 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CVAR_t039 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CVAR_t042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CVAR_t009 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CVAR_t035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CVAR_t036 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CVAR_t038 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CVAR_t006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t028 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t033 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t020 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t017 tRNA-His K14226 tRNA-His; tRNA His D CVAR_t001 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CVAR_t015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t026 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t004 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CVAR_t016 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CVAR_t027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CVAR_t022 tRNA-Met K14230 tRNA-Met; tRNA Met D CVAR_t046 tRNA-Met K14230 tRNA-Met; tRNA Met D CVAR_t043 tRNA-Met K14230 tRNA-Met; tRNA Met D CVAR_t012 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CVAR_t021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CVAR_t025 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CVAR_t050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CVAR_t057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t056 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CVAR_t047 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CVAR_t007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CVAR_t049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CVAR_t045 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CVAR_t048 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CVAR_t059 tRNA-Val K14237 tRNA-Val; tRNA Val D CVAR_t029 tRNA-Val K14237 tRNA-Val; tRNA Val D CVAR_t031 tRNA-Val K14237 tRNA-Val; tRNA Val D CVAR_t034 tRNA-Val K14237 tRNA-Val; tRNA Val D CVAR_1754 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_2544 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_1799 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CVAR_1793 gatB; glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CVAR_1800 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CVAR_1521 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CVAR_1524 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CVAR_1067 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CVAR_1559 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CVAR_0213 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CVAR_0514 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CVAR_2058 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CVAR_1497 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CVAR_0912 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CVAR_3007 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CVAR_1171 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CVAR_0502 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CVAR_1842 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CVAR_1647 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CVAR_1537 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CVAR_1247 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CVAR_1248 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CVAR_1258 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CVAR_2243 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cva03060] D CVAR_2334 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY D CVAR_2416 secE; preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE D CVAR_1479 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG D CVAR_1543 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D CVAR_1542 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D CVAR_1544 secN; protein-export membrane protein K03210 yajC; preprotein translocase subunit YajC D CVAR_2829 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_2873 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_3039 yidC; inner membrane protein translocase component K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_2167 secA1; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CVAR_1298 secA2; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CVAR_1720 srp; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CVAR_1722 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D CVAR_1977 tatA2; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D CVAR_1418 tatA1; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D CVAR_1979 tatB2; Sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D CVAR_1859 tatB1; Sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D CVAR_1978 tatC2; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC D CVAR_1417 tatC1; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC D CVAR_1712 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CVAR_0142 lepB1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CVAR_1176 putative membrane protein K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cva04122] D CVAR_1813 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CVAR_2207 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_0387 sseB1; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_1001 sseB2; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CVAR_1809 trmU; tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CVAR_2348 moaE; molybdenum cofactor biosynthesis protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CVAR_2358 moaA; molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CVAR_2347 moeB; molybdopterin biosynthesis protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D CVAR_1107 thiF; dinucleotide-utilizing enzyme involved in thiamine biosynthesis K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D CVAR_2350 moaC; molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CVAR_3048 thiS; thiamine biosynthesis protein K03154 thiS; sulfur carrier protein C 03050 Proteasome D CVAR_1424 hypothetical protein K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:cva03018] D CVAR_0920 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CVAR_2008 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CVAR_1633 gpsI; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CVAR_1849 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CVAR_0781 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CVAR_1837 rho; Transcription termination factor K03628 rho; transcription termination factor Rho D CVAR_1629 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CVAR_0331 dnaK; Molecular chaperone K04043 dnaK; molecular chaperone DnaK D CVAR_2290 groEL1; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_0474 groEL2; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_2037 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CVAR_0475 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CVAR_3017 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cva03030] D CVAR_1136 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1762 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1804 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_2508 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1188 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CVAR_2523 dnaX; DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CVAR_2444 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CVAR_0934 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CVAR_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_0846 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_2997 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CVAR_1074 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CVAR_0835 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CVAR_0801 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_2999 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_1925 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CVAR_1711 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CVAR_1225 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CVAR_1805 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cva03410] D CVAR_2473 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CVAR_1743 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CVAR_0507 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CVAR_0162 alkA; DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CVAR_1732 fpg2; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CVAR_0546 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CVAR_0676 hypothetical protein K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CVAR_0962 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CVAR_1894 hypothetical protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CVAR_2247 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CVAR_0464 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CVAR_0356 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CVAR_1225 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CVAR_1805 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cva03420] D CVAR_2015 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CVAR_1924 uvrA3; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CVAR_1241 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CVAR_1786 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CVAR_1236 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CVAR_1487 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CVAR_2110 pcrA1; ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_2146 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_2148 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_1225 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CVAR_1805 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CVAR_0611 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:cva03430] D CVAR_2110 pcrA1; ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_2146 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_2148 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_1918 xseA; exodeoxyribonuclease large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CVAR_1919 exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CVAR_0835 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CVAR_0801 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_2999 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_1188 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CVAR_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_0846 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_2523 dnaX; DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CVAR_0934 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CVAR_2444 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CVAR_1136 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1762 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1804 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_2508 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1805 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cva03440] D CVAR_0835 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CVAR_0801 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_2999 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_0003 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF D CVAR_1063 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D CVAR_2521 recombination protein K06187 recR; recombination protein RecR D CVAR_1617 recA; recombinase A K03553 recA; recombination protein RecA D CVAR_1225 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CVAR_1546 Holliday junction resolvasome helicase subunit A K03550 ruvA; holliday junction DNA helicase RuvA D CVAR_1545 ruvB; Holliday junction resolvasome helicase subunit B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CVAR_1547 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CVAR_0153 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CVAR_1741 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CVAR_3012 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CVAR_1188 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CVAR_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_0846 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_2523 dnaX; DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CVAR_0934 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CVAR_2444 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CVAR_1136 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1762 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1804 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_2508 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1499 priA; primosomal protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining D CVAR_1338 ligD; DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:cva03250] D CVAR_0056 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cva02010] D CVAR_2259 susA; sulfate ABC transport system substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CVAR_2258 susB; sulfate ABC transport system permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein D CVAR_2257 susC; sulfate ABC transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein D CVAR_2256 susD; sulfate ABC transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CVAR_0010 tauB; taurine ABC transport system substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CVAR_0009 tauC; taurine ABC transport system permease protein K15552 tauC; taurine transport system permease protein D CVAR_0011 tauA; taurine ABC transport system ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CVAR_0403 ABC transport system substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D CVAR_0404 ABC transport system permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D CVAR_0405 ABC transport system ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D CVAR_2357 molA; molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CVAR_2356 putative membrane protein K02018 modB; molybdate transport system permease protein D CVAR_2671 ABC transport system substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D CVAR_2669 ABC transport system permease protein K11070 potC; spermidine/putrescine transport system permease protein D CVAR_2670 ABC transport system permease protein K11071 potB; spermidine/putrescine transport system permease protein D CVAR_2672 ABC transport system ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CVAR_0296 ABC transport system substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CVAR_0295 ABC transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein D CVAR_0294 ABC transport system ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CVAR_2195 sugA; sugar ABC transport system subunit K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CVAR_2196 sugB; sugar ABC transport system subunit K10236 thuE; trehalose/maltose transport system substrate-binding protein D CVAR_2197 sugC; sugar ABC transport system subunit K10237 thuF; trehalose/maltose transport system permease protein D CVAR_2198 sugD; sugar ABC transport system subunit K10238 thuG; trehalose/maltose transport system permease protein D CVAR_0579 pstS; phosphate upatke system phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CVAR_0580 pstC; phosphate uptake system permease protein K02037 pstC; phosphate transport system permease protein D CVAR_0581 pstA; phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein D CVAR_0582 pstB; phosphate uptake system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CVAR_1613 gluB; glutamate ABC transport system substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D CVAR_1614 gluC; glutamate ABC transport system permease protein K10006 gluC; glutamate transport system permease protein D CVAR_1615 gluD; glutamate ABC transport system permease protein K10007 gluD; glutamate transport system permease protein D CVAR_1612 gluA; glutamate ABC transport system ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CVAR_2275 metQ; methionine ABC transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CVAR_0999 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D CVAR_2277 metI; methionine ABC transport system permease protein K02072 metI; D-methionine transport system permease protein D CVAR_2276 metN; methionine ABC transport system ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CVAR_0560 putative secreted protein K15580 oppA; oligopeptide transport system substrate-binding protein D CVAR_0559 putative membrane protein K15581 oppB; oligopeptide transport system permease protein D CVAR_0558 putative membrane protein K15582 oppC; oligopeptide transport system permease protein D CVAR_0557 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein D CVAR_2106 putative secreted protein K13889 gsiB; glutathione transport system substrate-binding protein D CVAR_2109 putative membrane protein K13890 gsiC; glutathione transport system permease protein D CVAR_2108 putative membrane protein K13891 gsiD; glutathione transport system permease protein D CVAR_2107 hypothetical protein K13892 gsiA; glutathione transport system ATP-binding protein D CVAR_2502 siuS8; siderophore-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CVAR_2503 siuS9; siderophore-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CVAR_0760 siuS6; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_0236 siuS13; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2541 fiuS5; iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_1957 hypothetical protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2809 fiuS1; iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_1687 putative secreted protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_0923 siuS17; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_3014 siuS16; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2730 hypothetical protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2539 fiuS4; iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2811 fiuS2; iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2534 hypothetical protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2819 siuS4; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_0237 fiuP2; iron ABC transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D CVAR_2376 fiuP3; iron ABC transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D CVAR_2538 fiuQ4; iron ABC transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D CVAR_2808 fiuQ1; iron ABC transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D CVAR_0238 fiuQ2; iron ABC transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D CVAR_2377 fiuQ3; iron ABC transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D CVAR_2537 fiuP5; iron ABC transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D CVAR_2807 fiuP1; iron ABC transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D CVAR_0239 fiuA2; iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CVAR_2378 fiuA3; iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CVAR_2536 fiuA5; iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CVAR_2806 fiuA1; iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CVAR_0374 fiuS3; iron ABC transport system substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CVAR_0373 fiuP4; iron ABC transport system permease protein K23228 fhuB; ferric hydroxamate transport system permease protein D CVAR_0375 fiuA4; iron ABC transport system ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CVAR_2011 mntA; manganese ABC transport system substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D CVAR_2013 mntC; manganese ABC transport system permease protein K11602 mntB; manganese transport system permease protein D CVAR_2012 mntB; manganese ABC transport system ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D CVAR_1619 bioY; BioY family protein K03523 bioY; biotin transport system substrate-specific component D CVAR_1621 bioN; biotin ABC transport system permease protein K16783 bioN; biotin transport system permease protein D CVAR_1620 biotin ABC transport system ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CVAR_0433 putative membrane protein K16785 ecfT; energy-coupling factor transport system permease protein D CVAR_2906 putative membrane protein K09690 wzm; homopolymeric O-antigen transport system permease protein D CVAR_3054 putative membrane protein K09813 hrtB; hemin transport system permease protein D CVAR_0674 putative membrane protein K09813 hrtB; hemin transport system permease protein D CVAR_0673 hypothetical protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CVAR_0145 hypothetical protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CVAR_0620 hypothetical protein K18232 oleC4; oleandomycin transport system ATP-binding protein D CVAR_0697 ftsX; Cell division protein K09811 ftsX; cell division transport system permease protein D CVAR_0696 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D CVAR_2233 ABC transport system permease protein / ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CVAR_2232 ABC transport system permease protein / ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CVAR_0105 putative membrane protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CVAR_0106 putative membrane protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CVAR_0185 ABC transport system, ATPase and permease components K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CVAR_0186 ABC transport system, ATPase and permease components K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CVAR_0110 hypothetical protein K18230 tylC; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cva02060] D CVAR_1600 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CVAR_1602 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CVAR_0388 nagE; PTS system N-acetylglucosamine-specific component II K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CVAR_1231 ptsG; PTS system glucose-specific component II K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CVAR_2115 ptsF; PTS system fructose-specific component II K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 03070 Bacterial secretion system [PATH:cva03070] D CVAR_1543 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D CVAR_1542 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D CVAR_2416 secE; preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE D CVAR_1479 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG D CVAR_2334 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY D CVAR_1544 secN; protein-export membrane protein K03210 yajC; preprotein translocase subunit YajC D CVAR_2829 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_2873 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_3039 yidC; inner membrane protein translocase component K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_2167 secA1; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CVAR_1298 secA2; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CVAR_1722 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D CVAR_1720 srp; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CVAR_1977 tatA2; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D CVAR_1418 tatA1; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D CVAR_1979 tatB2; Sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D CVAR_1859 tatB1; Sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D CVAR_1978 tatC2; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC D CVAR_1417 tatC1; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:cva02020] D CVAR_0147 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CVAR_2451 putative secreted protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CVAR_2748 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CVAR_2747 two-component system response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CVAR_0579 pstS; phosphate upatke system phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CVAR_1472 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CVAR_2072 mprA; two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA D CVAR_2071 pepD; trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CVAR_2171 mtrB; two-component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CVAR_2172 mtrA; two-component system response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CVAR_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CVAR_2011 mntA; manganese ABC transport system substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D CVAR_2012 mntB; manganese ABC transport system ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D CVAR_2013 mntC; manganese ABC transport system permease protein K11602 mntB; manganese transport system permease protein D CVAR_2088 citE; citrate lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CVAR_0384 two-component system sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D CVAR_0385 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR D CVAR_2464 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CVAR_2463 hypothetical protein K12510 tadB; tight adherence protein B D CVAR_1097 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1118 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0563 putative membrane protein K11103 dctA; aerobic C4-dicarboxylate transport protein D CVAR_0948 dctT; TRAP dicarboxylate transporter subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CVAR_2474 glxR; Crp-family transcription regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CVAR_1223 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CVAR_0188 cydA; cytochrome bd-type menaquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CVAR_0187 cydB; cytochrome bd-type menaquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CVAR_0315 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CVAR_0310 hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cva02024] D CVAR_1209 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CVAR_1145 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CVAR_2979 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CVAR_2036 fadD8; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_0227 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_1053 fadD9; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_2474 glxR; Crp-family transcription regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CVAR_1492 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-5-phosphoribosylamino uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CVAR_0560 putative secreted protein K15580 oppA; oligopeptide transport system substrate-binding protein D CVAR_0559 putative membrane protein K15581 oppB; oligopeptide transport system permease protein D CVAR_0558 putative membrane protein K15582 oppC; oligopeptide transport system permease protein D CVAR_0557 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein D CVAR_1541 putative secreted protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CVAR_0020 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CVAR_0164 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CVAR_0165 putative membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D CVAR_0166 putative membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CVAR_0167 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CVAR_2829 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_2873 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_3039 yidC; inner membrane protein translocase component K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_2416 secE; preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE D CVAR_1479 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG D CVAR_2334 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY D CVAR_1544 secN; protein-export membrane protein K03210 yajC; preprotein translocase subunit YajC D CVAR_2167 secA1; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CVAR_1298 secA2; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CVAR_1722 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D CVAR_1720 srp; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D CVAR_1580 sigA; RNA polymerase sigma factor A K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CVAR_2008 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cva01501] D CVAR_0301 putative secreted protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CVAR_0560 putative secreted protein K15580 oppA; oligopeptide transport system substrate-binding protein D CVAR_0559 putative membrane protein K15581 oppB; oligopeptide transport system permease protein D CVAR_0558 putative membrane protein K15582 oppC; oligopeptide transport system permease protein D CVAR_0557 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein D CVAR_1156 ftsI; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cva01502] D CVAR_1746 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CVAR_1158 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CVAR_1159 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CVAR_1162 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cva01503] D CVAR_2242 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_0981 putative secreted protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_3027 cwlM; putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_0056 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cva01000] C 01001 Protein kinases [BR:cva01001] D CVAR_0457 pknG; Serine/threonine protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D CVAR_0062 pknA; Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CVAR_0061 pknB1; Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CVAR_1146 pknL; Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CVAR_2854 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CVAR_0320 putative protein-tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D CVAR_2748 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CVAR_2171 mtrB; two-component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CVAR_0539 phoS; two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CVAR_0384 two-component system sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D CVAR_1027 citA; two-component system sensor kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cva01009] D CVAR_2174 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CVAR_0065 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CVAR_0725 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:cva01002] D CVAR_1176 putative membrane protein K03101 lspA; signal peptidase II [EC:3.4.23.36] D CVAR_1517 putative membrane protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CVAR_2268 hypothetical protein K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D CVAR_2269 hypothetical protein K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D CVAR_2283 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CVAR_1012 hypothetical protein K07010 K07010; putative glutamine amidotransferase D CVAR_1138 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CVAR_1137 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CVAR_2217 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CVAR_1454 rpfI; resuscitation-promoting factor interacting protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CVAR_2341 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CVAR_1493 gltB2; glutamate synthase subunit aplpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CVAR_2900 gltB; glutamate synthase subunit aplpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CVAR_2295 glmS; glucosamine-fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CVAR_1128 ltsA; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CVAR_0117 intracellular protease K05520 yhbO; deglycase [EC:3.5.1.124] D CVAR_2121 intracellular protease K05520 yhbO; deglycase [EC:3.5.1.124] D CVAR_0130 putative membrane protein K07052 K07052; CAAX protease family protein D CVAR_0204 putative membrane protein K07052 K07052; CAAX protease family protein D CVAR_0808 Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CVAR_1051 dcp; peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D CVAR_2888 pepO; probable zinc metalloprotease K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CVAR_1124 pepB1; putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CVAR_1866 pepB2; putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CVAR_1869 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CVAR_0473 hypothetical protein K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D CVAR_2332 mapA; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CVAR_1692 mapB; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CVAR_3021 pepQ2; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CVAR_1513 pepQ1; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CVAR_0484 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CVAR_2890 putative membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-] D CVAR_2071 pepD; trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CVAR_2320 sepP; putative serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CVAR_0562 hypothetical protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CVAR_2235 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CVAR_0482 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CVAR_0889 clpP1; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CVAR_0890 clpP2; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CVAR_2138 putative secreted protein K07177 K07177; Lon-like protease D CVAR_1599 lexA; SOS response regulatory protein K01356 lexA; repressor LexA [EC:3.4.21.88] D CVAR_1712 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CVAR_0142 lepB1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] C 01003 Glycosyltransferases [BR:cva01003] D CVAR_1410 ppm1; polyprenol-phosphate-mannose synthase domain 1 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D CVAR_2062 putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D CVAR_1555 pimA; Glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D CVAR_1139 pimBP; mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D CVAR_0702 putative membrane protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CVAR_2420 Glycosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D CVAR_0681 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CVAR_1833 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CVAR_0128 putative membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CVAR_1142 putative membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CVAR_1147 mptA; alpha 1,6 mannopyranosyltransferase K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CVAR_1469 mptB; alpha 1,6 mannopyranosyltransferase K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CVAR_2887 embB; arabinosyl transferase K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D CVAR_2886 aftA; arabinofuranosyltransferase A K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D CVAR_1564 aftC; arabinofuranosyltransferase C K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D CVAR_0299 aftD; arabinofuranosyltransferase D K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D CVAR_2917 hypothetical protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D CVAR_0241 glfT; glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D CVAR_2183 putative glycosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D CVAR_0527 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cva01005] D CVAR_1833 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cva01011] D CVAR_0595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CVAR_2752 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CVAR_1163 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CVAR_1160 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CVAR_1157 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CVAR_1746 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CVAR_0733 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CVAR_1159 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CVAR_1162 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CVAR_1446 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CVAR_3020 putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D CVAR_1156 ftsI; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CVAR_0063 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D CVAR_2235 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CVAR_0482 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CVAR_1138 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CVAR_1137 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CVAR_2217 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CVAR_1454 rpfI; resuscitation-promoting factor interacting protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CVAR_1519 putative secreted protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CVAR_2242 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_0981 putative secreted protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_3027 cwlM; putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cva01004] D CVAR_2516 fas; fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CVAR_1785 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_1233 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_2643 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CVAR_1552 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CVAR_2721 hypothetical protein K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D CVAR_0254 pks13; polyketide synthase K12437 pks13; polyketide synthase 13 D CVAR_2036 fadD8; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_0227 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_1053 fadD9; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_0253 fadD1; acyl-CoA synthetase K12428 fadD32; fatty acid CoA ligase FadD32 D CVAR_2087 fadD6; acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D CVAR_1141 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:cva01008] D CVAR_2847 hypothetical protein K05375 mbtH; MbtH protein D CVAR_2845 entE2; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D CVAR_2835 nrpS2; nonribosomal peptide synthetase K04788 mbtB; mycobactin phenyloxazoline synthetase D CVAR_0219 flavin reductase domain-containing protein K14631 actVB; flavin reductase ActVB [EC:1.5.1.-] D CVAR_2622 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:cva01006] D CVAR_1148 idsA; Geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CVAR_1939 hypothetical protein K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CVAR_1064 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CVAR_1608 miaA; tRNA delta2-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CVAR_2714 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CVAR_1473 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CVAR_0243 decaprenylphosphoryl-5-phosphoribose synthase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:cva01007] D CVAR_1754 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_2544 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_1258 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CVAR_2243 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CVAR_0514 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CVAR_1842 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CVAR_2058 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CVAR_1171 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CVAR_0912 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CVAR_3007 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CVAR_0502 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CVAR_1524 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CVAR_1537 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CVAR_1067 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CVAR_0213 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CVAR_1647 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CVAR_1559 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CVAR_1521 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CVAR_1247 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CVAR_1248 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CVAR_0328 alaT; alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CVAR_1326 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CVAR_0600 hypothetical protein K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CVAR_1201 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_2566 aroT; aromatic amino acid aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CVAR_2406 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CVAR_1048 aecD; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CVAR_1252 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CVAR_0951 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_2953 gabT2; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CVAR_1289 bioA; Adenosylmethionine-8-amino-7-oxononanoateaminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CVAR_2731 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CVAR_1125 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CVAR_0631 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cva00194] D CVAR_1823 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CVAR_1824 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CVAR_1825 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CVAR_1826 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CVAR_1827 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CVAR_1828 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CVAR_1829 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CVAR_1830 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cva03000] D CVAR_2693 DNA cytosine-5-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CVAR_1593 oxyR; LysR DNA-binding transcription regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CVAR_1787 lysG; LysR DNA-binding transcription regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CVAR_0259 LysR DNA-binding transcription regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D CVAR_1601 DeoR DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CVAR_2113 fruR; DeoR DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CVAR_2304 GntR DNA-binding transcription regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CVAR_1195 TetR DNA-binding transcription regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D CVAR_1959 TetR DNA-binding transcription regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D CVAR_1456 acnR; TetR DNA-binding transcription regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D CVAR_2674 AsnC DNA-binding transcription regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D CVAR_0594 ramA; LuxR DNA-binding transcription regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D CVAR_0122 MarR DNA-binding transcription regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CVAR_0337 hspR; MerR DNA-binding transcription regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D CVAR_1066 zur; Fur DNA-binding transcription regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CVAR_2162 fur; Fur DNA-binding transcription regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D CVAR_2474 glxR; Crp-family transcription regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CVAR_0495 rrf2; Rrf2 DNA-binding transcription regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D CVAR_0359 ctpR; ArsR DNA-binding transcription regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CVAR_2600 ArsR DNA-binding transcription regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D CVAR_1623 clgR; HTH3 DNA-binding transcription regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D CVAR_2697 vanR; PadR DNA-binding transcription regulator K26740 vanR; PadR family transcriptional regulator, regulator of vanillate utilization D CVAR_1588 dtxR; DtxR DNA-binding transcription regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D CVAR_2010 mntR; DtxR DNA-binding transcription regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CVAR_2203 birA; biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CVAR_2589 hypothetical protein K07729 K07729; putative transcriptional regulator D CVAR_0638 HTH3 DNA-binding transcription regulator K07729 K07729; putative transcriptional regulator D CVAR_0183 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CVAR_2480 whcA; putative WhiB transcription regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CVAR_2289 whiB3; putative WhiB transcription regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CVAR_2181 whiB2; putative WhiB transcription regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CVAR_2156 whcE; putative WhiB transcription regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CVAR_1077 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CVAR_0995 purR; purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D CVAR_3036 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CVAR_0511 carD; putative transcription factor K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D CVAR_1254 Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CVAR_1056 hrcA; HrcA DNA-binding transcription regulator K03705 hrcA; heat-inducible transcriptional repressor D CVAR_2054 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CVAR_1510 pyrR; PyrR DNA-binding transcription regulator K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CVAR_1597 nrdR; NrdR DNA-binding transcription regulator K07738 nrdR; transcriptional repressor NrdR D CVAR_1153 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cva03021] D CVAR_0611 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CVAR_2327 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CVAR_2408 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CVAR_2407 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CVAR_1502 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CVAR_1580 sigA; RNA polymerase sigma factor A K03086 rpoD; RNA polymerase primary sigma factor D CVAR_1587 sigB; RNA polymerase sigma factor B K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CVAR_2158 sigH; ECF-family sigma factor H K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CVAR_2288 sigD; ECF-family sigma factor D K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CVAR_2492 sigC; ECF-family sigma factor C K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CVAR_1644 nusA; transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA D CVAR_1511 nusB; N utilization substance protein B-like protein K03625 nusB; transcription antitermination protein NusB D CVAR_2415 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D CVAR_1943 greA; Transcription elongation factor K03624 greA; transcription elongation factor GreA D CVAR_1837 rho; Transcription termination factor K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cva03019] D CVAR_0920 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CVAR_1733 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CVAR_1629 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CVAR_1072 putative secreted protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CVAR_0795 hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-] D CVAR_1849 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CVAR_0781 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CVAR_2008 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CVAR_1633 gpsI; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CVAR_1837 rho; Transcription termination factor K03628 rho; transcription termination factor Rho D CVAR_0331 dnaK; Molecular chaperone K04043 dnaK; molecular chaperone DnaK D CVAR_2290 groEL1; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_0474 groEL2; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_2037 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CVAR_0475 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CVAR_3017 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CVAR_1296 regulator of ribonuclease activity K02553 rraA; regulator of ribonuclease activity A D CVAR_1486 hypothetical protein K06958 rapZ; RNase adapter protein RapZ D CVAR_1416 ATP-dependent DNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D CVAR_1596 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D CVAR_2573 hrpB; ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:cva03011] D CVAR_1229 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CVAR_1703 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CVAR_2388 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CVAR_2328 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CVAR_2337 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CVAR_3000 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CVAR_2404 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CVAR_2340 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CVAR_2300 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CVAR_2395 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CVAR_2329 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CVAR_2405 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CVAR_2330 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CVAR_2077 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CVAR_1634 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CVAR_1719 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CVAR_2385 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CVAR_2078 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CVAR_2390 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CVAR_0960 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CVAR_2413 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CVAR_2391 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CVAR_2394 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CVAR_2393 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CVAR_2368 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CVAR_2339 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CVAR_2998 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CVAR_2411 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CVAR_2414 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CVAR_2410 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CVAR_2301 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CVAR_2370 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CVAR_2335 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CVAR_2387 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CVAR_2326 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CVAR_2338 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CVAR_1713 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CVAR_1245 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CVAR_0921 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CVAR_2389 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CVAR_2392 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CVAR_2369 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CVAR_0922 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CVAR_2075 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CVAR_2386 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CVAR_2336 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CVAR_2074 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CVAR_2073 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CVAR_2076 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CVAR_3041 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CVAR_1244 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CVAR_0716 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CVAR_2018 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CVAR_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r16 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r15 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r18 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cva03009] D CVAR_1733 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CVAR_0795 hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-] D CVAR_1062 putative GTP-binding protein K03595 era; GTPase D CVAR_0924 hypothetical protein K03979 obgE; GTPase [EC:3.6.5.-] D CVAR_1644 nusA; transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA D CVAR_1511 nusB; N utilization substance protein B-like protein K03625 nusB; transcription antitermination protein NusB D CVAR_2415 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D CVAR_2051 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CVAR_1496 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CVAR_1739 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CVAR_1058 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CVAR_3038 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CVAR_1154 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CVAR_2061 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CVAR_1267 hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CVAR_1865 rrmA; ribosomal RNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CVAR_0516 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CVAR_1697 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CVAR_2876 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CVAR_1280 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CVAR_1177 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CVAR_1717 rimM; ribosome maturation factor K02860 rimM; 16S rRNA processing protein RimM D CVAR_0920 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CVAR_1520 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CVAR_1849 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CVAR_2161 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CVAR_1282 hypothetical protein K03977 engA; GTPase D CVAR_1604 hflX; GTPase K03665 hflX; GTPase D CVAR_1834 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CVAR_1539 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CVAR_1641 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CVAR_1645 hypothetical protein K09748 rimP; ribosome maturation factor RimP D CVAR_2896 hypothetical protein K14761 rlbA; ribosome-associated protein D CVAR_0930 hypothetical protein K09710 ybeB; ribosome-associated protein D CVAR_1060 hypothetical protein K07042 ybeY; probable rRNA maturation factor D CVAR_1913 hypothetical protein K06942 ychF; ribosome-binding ATPase D CVAR_1734 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cva03016] D CVAR_1072 putative secreted protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CVAR_1754 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_2544 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_1647 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CVAR_1171 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CVAR_3007 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CVAR_2058 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CVAR_1842 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CVAR_0502 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CVAR_1524 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CVAR_1521 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CVAR_1067 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CVAR_1559 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CVAR_0213 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CVAR_0514 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CVAR_0912 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CVAR_1537 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CVAR_1247 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CVAR_1248 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CVAR_1258 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CVAR_2243 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CVAR_1586 dtd; D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CVAR_1425 hypothetical protein K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D CVAR_0264 hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CVAR_2324 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CVAR_1636 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CVAR_1813 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CVAR_1834 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CVAR_1608 miaA; tRNA delta2-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CVAR_0652 cysQ; inositol-1-monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CVAR_3040 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CVAR_0735 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CVAR_1570 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CVAR_2822 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CVAR_2866 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CVAR_2553 hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CVAR_1611 miaB; dimethylallyl adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CVAR_1716 trmD; tRNA guanine-N1-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CVAR_2263 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CVAR_1246 hypothetical protein K03437 spoU; RNA methyltransferase, TrmH family D CVAR_2876 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CVAR_1809 trmU; tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CVAR_0573 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ D CVAR_2550 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CVAR_0483 hpt; hypoxanthine phosphoribosyltransferase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CVAR_2292 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CVAR_1633 gpsI; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CVAR_0757 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:cva03012] D CVAR_1642 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CVAR_1243 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CVAR_1702 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CVAR_2402 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu D CVAR_2403 fusA; elongation factor EF-G K02355 fusA; elongation factor G D CVAR_1836 peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1 D CVAR_1700 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor D CVAR_1835 methylase of peptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CVAR_2019 pthB; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CVAR_2020 pthA; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CVAR_2331 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CVAR_1512 efp; elongation factor EF-P K02356 efp; elongation factor P D CVAR_0688 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2 D CVAR_2024 prfC; Peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:cva03110] D CVAR_0381 clpB1; ATP-dependent Clp protease ATP-binding subunit K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CVAR_0506 clpB2; ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CVAR_0897 ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CVAR_0331 dnaK; Molecular chaperone K04043 dnaK; molecular chaperone DnaK D CVAR_2290 groEL1; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_0474 groEL2; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_0336 dnaJ; molecular chaperone K03686 dnaJ; molecular chaperone DnaJ D CVAR_1057 hypothetical protein K03686 dnaJ; molecular chaperone DnaJ D CVAR_0332 grpE; molecular chaperone K03687 GRPE; molecular chaperone GrpE D CVAR_0436 hypothetical protein K13993 HSP20; HSP20 family protein D CVAR_1191 hypothetical protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D CVAR_2291 groES; molecular chaperone K04078 groES; chaperonin GroES D CVAR_0484 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CVAR_1830 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CVAR_1561 putative secreted protein K09796 pccA; periplasmic copper chaperone A D CVAR_2599 putative secreted protein K09796 pccA; periplasmic copper chaperone A D CVAR_2320 sepP; putative serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CVAR_0056 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CVAR_1538 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CVAR_2990 trxA; thioredoxin K03671 TXN; thioredoxin D CVAR_0268 hypothetical protein K05838 ybbN; putative thioredoxin D CVAR_1820 hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:cva04131] D CVAR_0918 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CVAR_1113 hypothetical protein K07192 FLOT; flotillin D CVAR_1483 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CVAR_1851 gapB; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CVAR_2749 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CVAR_1215 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CVAR_0534 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:cva04121] D CVAR_1422 pup; pupylation protein K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:cva03051] D CVAR_1424 hypothetical protein K13527 mpa; proteasome-associated ATPase D CVAR_1421 proteasome accessory factor K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D CVAR_1423 proteasome accessory factor K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:cva03032] D CVAR_1925 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CVAR_2693 DNA cytosine-5-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CVAR_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CVAR_2997 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CVAR_1074 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CVAR_0835 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CVAR_0801 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_2999 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_1188 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CVAR_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_0846 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_0934 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CVAR_2444 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CVAR_1136 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1762 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1804 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_2508 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_2523 dnaX; DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CVAR_1711 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CVAR_1225 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CVAR_1805 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CVAR_0015 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CVAR_0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CVAR_2453 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cva03036] D CVAR_2693 DNA cytosine-5-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CVAR_1733 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CVAR_1113 hypothetical protein K07192 FLOT; flotillin D CVAR_2826 lsr2B; multifunctional histone-like protein K26249 lsr2; nucleoid-associated protein Lsr2 D CVAR_2870 lsr2A; multifunctional histone-like protein K26249 lsr2; nucleoid-associated protein Lsr2 D CVAR_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CVAR_0127 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D CVAR_1787 lysG; LysR DNA-binding transcription regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CVAR_1724 smc; chromosome partition protein K03529 smc; chromosome segregation protein D CVAR_1278 scpB; segregation and condensation protein K05896 scpA; segregation and condensation protein A D CVAR_1279 hypothetical protein K06024 scpB; segregation and condensation protein B D CVAR_0696 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D CVAR_1156 ftsI; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CVAR_2306 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CVAR_2318 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CVAR_1627 ftsK; cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CVAR_1164 ftsQ; cell division protein K03589 ftsQ; cell division protein FtsQ D CVAR_1161 ftsW; cell division protein K03588 ftsW; cell division protein FtsW D CVAR_0697 ftsX; Cell division protein K09811 ftsX; cell division transport system permease protein D CVAR_1165 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D CVAR_2242 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_0981 putative secreted protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_3027 cwlM; putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_1167 sepF; cell division protein K09772 sepF; cell division inhibitor SepF D CVAR_1277 scpA; segregation and condensation protein K03496 parA; chromosome partitioning protein D CVAR_3037 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein D CVAR_3036 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CVAR_3038 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CVAR_1705 xerC; tyrosine recombinase K03733 xerC; integrase/recombinase XerC D CVAR_1276 tyrosine recombinase K04763 xerD; integrase/recombinase XerD D CVAR_1858 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CVAR_0132 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D CVAR_1484 whiA; putative WhiA transcription regulator K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cva03400] D CVAR_1982 ogtA; O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CVAR_0657 phr; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CVAR_1743 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CVAR_0162 alkA; DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CVAR_0507 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CVAR_2473 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CVAR_0611 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CVAR_1103 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CVAR_1797 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CVAR_1575 dut1; deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CVAR_0847 dut2; deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CVAR_0963 hypothetical protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D CVAR_1894 hypothetical protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CVAR_0962 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CVAR_1732 fpg2; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CVAR_0546 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CVAR_0676 hypothetical protein K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CVAR_2247 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CVAR_0464 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CVAR_0356 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CVAR_1805 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CVAR_1225 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CVAR_1924 uvrA3; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CVAR_1241 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CVAR_1786 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CVAR_1236 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CVAR_1487 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CVAR_2110 pcrA1; ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_2146 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_2148 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CVAR_2408 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CVAR_2407 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CVAR_2327 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CVAR_1502 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CVAR_2015 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CVAR_1918 xseA; exodeoxyribonuclease large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CVAR_1919 exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CVAR_1188 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CVAR_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_0846 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CVAR_0934 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CVAR_2444 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CVAR_1136 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1762 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_1804 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_2508 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CVAR_2523 dnaX; DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CVAR_0835 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CVAR_0801 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_2999 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_1617 recA; recombinase A K03553 recA; recombination protein RecA D CVAR_1546 Holliday junction resolvasome helicase subunit A K03550 ruvA; holliday junction DNA helicase RuvA D CVAR_1545 ruvB; Holliday junction resolvasome helicase subunit B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CVAR_1547 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CVAR_0845 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D CVAR_1499 priA; primosomal protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CVAR_0510 DNA repair protein K04485 radA; DNA repair protein RadA/Sms D CVAR_0003 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF D CVAR_0153 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CVAR_1741 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CVAR_3012 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CVAR_1063 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D CVAR_2521 recombination protein K06187 recR; recombination protein RecR D CVAR_1269 DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N) D CVAR_0955 pcrA2; ATP-dependent DNA helicase II K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D CVAR_1338 ligD; DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D CVAR_0015 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CVAR_0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CVAR_2453 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CVAR_0781 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CVAR_1173 dinX; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CVAR_1599 lexA; SOS response regulatory protein K01356 lexA; repressor LexA [EC:3.4.21.88] D CVAR_2280 hypothetical protein K14161 imuB; protein ImuB D CVAR_2274 dnaE2; DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D CVAR_1616 recX; regulatory protein RecX K03565 recX; regulatory protein D CVAR_0728 dinG; ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CVAR_1678 hypothetical protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CVAR_0672 hypothetical protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CVAR_1748 hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D CVAR_1275 hypothetical protein K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D CVAR_0218 nrdE1; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CVAR_0720 nrdE2; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CVAR_0850 nrdF3; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CVAR_0722 nrdF2; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CVAR_0222 nrdF1; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cva03029] D CVAR_1642 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CVAR_1243 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CVAR_1702 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CVAR_2402 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu D CVAR_2403 fusA; elongation factor EF-G K02355 fusA; elongation factor G D CVAR_1062 putative GTP-binding protein K03595 era; GTPase D CVAR_1258 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CVAR_3007 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CVAR_1524 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CVAR_1067 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CVAR_1842 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CVAR_1799 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CVAR_1793 gatB; glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CVAR_1800 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CVAR_0835 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CVAR_0801 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_2999 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CVAR_0331 dnaK; Molecular chaperone K04043 dnaK; molecular chaperone DnaK D CVAR_0332 grpE; molecular chaperone K03687 GRPE; molecular chaperone GrpE D CVAR_2290 groEL1; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_0474 groEL2; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_2291 groES; molecular chaperone K04078 groES; chaperonin GroES D CVAR_0336 dnaJ; molecular chaperone K03686 dnaJ; molecular chaperone DnaJ D CVAR_1057 hypothetical protein K03686 dnaJ; molecular chaperone DnaJ D CVAR_1813 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CVAR_1858 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CVAR_1473 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CVAR_1472 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CVAR_2829 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_2873 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_3039 yidC; inner membrane protein translocase component K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cva02000] D CVAR_2233 ABC transport system permease protein / ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CVAR_2232 ABC transport system permease protein / ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CVAR_0105 putative membrane protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CVAR_0106 putative membrane protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CVAR_1047 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CVAR_0185 ABC transport system, ATPase and permease components K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CVAR_0186 ABC transport system, ATPase and permease components K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CVAR_0110 hypothetical protein K18230 tylC; macrolide transport system ATP-binding/permease protein D CVAR_2049 hypothetical protein K15738 uup; ABC transport system ATP-binding/permease protein D CVAR_0754 putative membrane protein K02021 ABC.MR; putative ABC transport system ATP-binding protein D CVAR_0229 putative membrane protein K02021 ABC.MR; putative ABC transport system ATP-binding protein D CVAR_2259 susA; sulfate ABC transport system substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CVAR_2258 susB; sulfate ABC transport system permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein D CVAR_2257 susC; sulfate ABC transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein D CVAR_2256 susD; sulfate ABC transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CVAR_2357 molA; molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CVAR_2356 putative membrane protein K02018 modB; molybdate transport system permease protein D CVAR_0010 tauB; taurine ABC transport system substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CVAR_0009 tauC; taurine ABC transport system permease protein K15552 tauC; taurine transport system permease protein D CVAR_0011 tauA; taurine ABC transport system ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CVAR_2671 ABC transport system substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D CVAR_2669 ABC transport system permease protein K11070 potC; spermidine/putrescine transport system permease protein D CVAR_2670 ABC transport system permease protein K11071 potB; spermidine/putrescine transport system permease protein D CVAR_2672 ABC transport system ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CVAR_0296 ABC transport system substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D CVAR_0295 ABC transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein D CVAR_0294 ABC transport system ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CVAR_0403 ABC transport system substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D CVAR_0404 ABC transport system permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D CVAR_0405 ABC transport system ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D CVAR_2690 nrtA; nitrate ABC transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CVAR_1661 ABC transport system permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CVAR_2689 ntrB; nitrate ABC transport system permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CVAR_2650 ABC transport system permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CVAR_1660 ABC transport system ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CVAR_2688 ntrC; nitrate ABC transport system ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CVAR_2649 ABC transport system ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CVAR_2195 sugA; sugar ABC transport system subunit K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CVAR_2196 sugB; sugar ABC transport system subunit K10236 thuE; trehalose/maltose transport system substrate-binding protein D CVAR_2197 sugC; sugar ABC transport system subunit K10237 thuF; trehalose/maltose transport system permease protein D CVAR_2198 sugD; sugar ABC transport system subunit K10238 thuG; trehalose/maltose transport system permease protein D CVAR_0766 putative membrane protein K02069 STAR2; UDP-glucose/iron transport system permease protein D CVAR_2226 putative secreted protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D CVAR_2225 putative membrane protein K02057 ABC.SS.P; simple sugar transport system permease protein D CVAR_2224 hypothetical protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D CVAR_0579 pstS; phosphate upatke system phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CVAR_0580 pstC; phosphate uptake system permease protein K02037 pstC; phosphate transport system permease protein D CVAR_0581 pstA; phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein D CVAR_0582 pstB; phosphate uptake system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CVAR_1613 gluB; glutamate ABC transport system substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D CVAR_1614 gluC; glutamate ABC transport system permease protein K10006 gluC; glutamate transport system permease protein D CVAR_1615 gluD; glutamate ABC transport system permease protein K10007 gluD; glutamate transport system permease protein D CVAR_1612 gluA; glutamate ABC transport system ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CVAR_2275 metQ; methionine ABC transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CVAR_0999 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D CVAR_2277 metI; methionine ABC transport system permease protein K02072 metI; D-methionine transport system permease protein D CVAR_2276 metN; methionine ABC transport system ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CVAR_0458 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CVAR_1222 putative secreted protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CVAR_1221 putative membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein D CVAR_1220 hypothetical protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CVAR_0560 putative secreted protein K15580 oppA; oligopeptide transport system substrate-binding protein D CVAR_0559 putative membrane protein K15581 oppB; oligopeptide transport system permease protein D CVAR_0558 putative membrane protein K15582 oppC; oligopeptide transport system permease protein D CVAR_0557 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein D CVAR_2106 putative secreted protein K13889 gsiB; glutathione transport system substrate-binding protein D CVAR_2109 putative membrane protein K13890 gsiC; glutathione transport system permease protein D CVAR_2108 putative membrane protein K13891 gsiD; glutathione transport system permease protein D CVAR_2107 hypothetical protein K13892 gsiA; glutathione transport system ATP-binding protein D CVAR_1541 putative secreted protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CVAR_0020 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CVAR_0164 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CVAR_0165 putative membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D CVAR_0166 putative membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CVAR_0167 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CVAR_0374 fiuS3; iron ABC transport system substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CVAR_0373 fiuP4; iron ABC transport system permease protein K23228 fhuB; ferric hydroxamate transport system permease protein D CVAR_0375 fiuA4; iron ABC transport system ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CVAR_2343 iron ABC transport system substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D CVAR_1099 hmuU; iron ABC transport system permease protein K25133 hmuU; heme transport system permease protein D CVAR_1100 iron ABC transport system ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D CVAR_2502 siuS8; siderophore-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CVAR_2503 siuS9; siderophore-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CVAR_0760 siuS6; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_0236 siuS13; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2541 fiuS5; iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_1957 hypothetical protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2809 fiuS1; iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_1687 putative secreted protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_0923 siuS17; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_3014 siuS16; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2730 hypothetical protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2539 fiuS4; iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2811 fiuS2; iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2534 hypothetical protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_2819 siuS4; iron-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CVAR_0237 fiuP2; iron ABC transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D CVAR_2376 fiuP3; iron ABC transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D CVAR_2538 fiuQ4; iron ABC transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D CVAR_2808 fiuQ1; iron ABC transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D CVAR_0238 fiuQ2; iron ABC transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D CVAR_2377 fiuQ3; iron ABC transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D CVAR_2537 fiuP5; iron ABC transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D CVAR_2807 fiuP1; iron ABC transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D CVAR_0239 fiuA2; iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CVAR_2378 fiuA3; iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CVAR_2536 fiuA5; iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CVAR_2806 fiuA1; iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CVAR_0752 ABC transport system substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D CVAR_0750 ABC transport system permease protein K25283 yclO; iron-siderophore transport system permease protein D CVAR_0751 ABC transport system permease protein K25284 yclN; iron-siderophore transport system permease protein D CVAR_0749 ABC transport system ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D CVAR_0051 siuS14; iron-siderophore binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_0230 siuS10; iron-siderophore binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_0231 siuS11; iron-siderophore binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_0235 siuS12; iron-siderophore binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_0597 putative secreted protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_0771 siuS7; iron-siderophore binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_2812 siuS1; iron-siderophore binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_2817 siuS3; Fe3+ citrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_2820 siuS5; iron-siderophore binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_2435 znuA; zinc ABC transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_2605 znuA2; zinc ABC transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_2230 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_2816 siuS2; Fe3+ citrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CVAR_2436 znuB; zinc ABC transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D CVAR_2604 znuB2; zinc ABC transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D CVAR_0141 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CVAR_1819 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CVAR_2438 znuC1; zinc ABC transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CVAR_2606 znuC2; zinc ABC transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CVAR_2437 znuC; zinc ABC transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CVAR_2011 mntA; manganese ABC transport system substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D CVAR_2013 mntC; manganese ABC transport system permease protein K11602 mntB; manganese transport system permease protein D CVAR_2012 mntB; manganese ABC transport system ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D CVAR_1619 bioY; BioY family protein K03523 bioY; biotin transport system substrate-specific component D CVAR_1621 bioN; biotin ABC transport system permease protein K16783 bioN; biotin transport system permease protein D CVAR_1620 biotin ABC transport system ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CVAR_0432 putative membrane protein K16923 qrtT; energy-coupling factor transport system substrate-specific component D CVAR_0433 putative membrane protein K16785 ecfT; energy-coupling factor transport system permease protein D CVAR_0670 putative secreted protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CVAR_0523 ABC transport system substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CVAR_0668 putative membrane protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CVAR_0521 ABC transport system permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CVAR_0522 ABC transport system ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D CVAR_0667 ciuD; iron ABC transport system ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D CVAR_2906 putative membrane protein K09690 wzm; homopolymeric O-antigen transport system permease protein D CVAR_3054 putative membrane protein K09813 hrtB; hemin transport system permease protein D CVAR_0674 putative membrane protein K09813 hrtB; hemin transport system permease protein D CVAR_0673 hypothetical protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CVAR_0145 hypothetical protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CVAR_0620 hypothetical protein K18232 oleC4; oleandomycin transport system ATP-binding protein D CVAR_0697 ftsX; Cell division protein K09811 ftsX; cell division transport system permease protein D CVAR_0696 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D CVAR_0383 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CVAR_0695 transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CVAR_1471 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CVAR_2191 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CVAR_0635 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CVAR_0460 ABC transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CVAR_0156 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CVAR_0636 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_2883 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_0157 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_0382 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_0693 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_1470 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_2192 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_3061 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_1357 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CVAR_0096 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D CVAR_0596 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D CVAR_0095 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CVAR_1465 ABC-type transport system involved in Fe-S cluster assembly ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D CVAR_3011 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CVAR_0797 putative membrane protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CVAR_1640 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump D CVAR_1657 putative membrane protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CVAR_0207 putative membrane protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CVAR_0041 proP; proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CVAR_0935 oxlT; oxalate:formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D CVAR_0291 putative membrane protein K05548 benK; MFS transporter, AAHS family, benzoate transport protein D CVAR_2851 putative membrane protein K05548 benK; MFS transporter, AAHS family, benzoate transport protein D CVAR_2694 putative membrane protein K26744 vanK; MFS transporter, AAHS family, vanillate permease D CVAR_3045 major facilitator superfamily permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D CVAR_2380 putative membrane protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D CVAR_2362 narT; nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CVAR_0461 major facilitator superfamily permease K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CVAR_1961 putative membrane protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CVAR_2248 putative membrane protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CVAR_1960 putative membrane protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CVAR_2624 putative membrane protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CVAR_2988 lmrB; lincomycin resistance protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D CVAR_1775 major facilitator superfamily permease K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D CVAR_0258 putative membrane protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CVAR_1988 putative membrane protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CVAR_0534 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family D CVAR_0515 putative membrane protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CVAR_1600 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CVAR_1602 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CVAR_0388 nagE; PTS system N-acetylglucosamine-specific component II K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CVAR_1231 ptsG; PTS system glucose-specific component II K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CVAR_2115 ptsF; PTS system fructose-specific component II K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CVAR_2636 glpF; glycerol uptake facilitator protein K06188 aqpZ; aquaporin Z D CVAR_2147 hypothetical protein K10716 kch; voltage-gated potassium channel D CVAR_1721 amtC; ammonium transporter K03320 amt; ammonium transporter, Amt family D CVAR_1024 amtA; ammonium transporter K03320 amt; ammonium transporter, Amt family D CVAR_1025 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family D CVAR_2353 putative membrane protein K21993 fdhC; formate transporter D CVAR_2069 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D CVAR_1782 putative membrane protein K22044 ybiO; moderate conductance mechanosensitive channel D CVAR_1405 putative membrane protein K06213 mgtE; magnesium transporter D CVAR_1855 hypothetical protein K03284 corA; magnesium transporter D CVAR_2993 hypothetical protein K06199 crcB; fluoride exporter D CVAR_2994 hypothetical protein K06199 crcB; fluoride exporter D CVAR_1304 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_0121 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_1305 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_0120 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_1061 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_0875 signal transduction histidine kinase K21449 ata; trimeric autotransporter adhesin D CVAR_0953 gabP1; 4-amino butyrate transport carrier K11735 gabP; GABA permease D CVAR_2952 gabP2; 4-amino butyrate transport carrier K11735 gabP; GABA permease D CVAR_2449 putative membrane protein K11735 gabP; GABA permease D CVAR_1172 ansP; L-asparagine permease K11738 ansP; L-asparagine permease D CVAR_1285 putative membrane protein K16235 mmuP; S-methylmethionine transporter D CVAR_1870 aroP; aromatic amino acid transport protein K16237 aroP; aromatic amino acid permease D CVAR_0350 lysI; L-lysine transport protein K03758 arcD; arginine:ornithine antiporter / lysine permease D CVAR_1778 czcE; Co/Zn/Cd efflux system transmembrane protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D CVAR_0262 mmpL3; drug exporter of the RND superfamily K20470 mmpL3; trehalose monomycolate/heme transporter D CVAR_1731 putative membrane protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D CVAR_2476 putative membrane protein K03298 TC.DME; drug/metabolite transporter, DME family D CVAR_0054 putative membrane protein K11939 rhtA; inner membrane transporter RhtA D CVAR_2612 hypothetical protein K11939 rhtA; inner membrane transporter RhtA D CVAR_1179 putative membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD D CVAR_2951 gntP; gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CVAR_0547 lldT; L-lactate permease K03303 lutP; lactate permease D CVAR_2512 betT2; high-affinity choline transport protein K05020 opuD; glycine betaine transporter D CVAR_1536 betT1; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein D CVAR_2513 betT3; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein D CVAR_1847 putP; sodium/proline symporter family protein K11928 putP; sodium/proline symporter D CVAR_0648 mctC; monocarboxylic acid transporter K14393 actP; cation/acetate symporter D CVAR_0563 putative membrane protein K11103 dctA; aerobic C4-dicarboxylate transport protein D CVAR_0535 nhaA; Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D CVAR_1814 putative membrane protein K24163 nhaK; monovalent cation/hydrogen antiporter D CVAR_0901 putative membrane protein K24206 uacT; uric acid transporter D CVAR_2664 putative membrane protein K24206 uacT; uric acid transporter D CVAR_0627 putative membrane protein K06901 pbuG; adenine/guanine/hypoxanthine permease D CVAR_1005 putative membrane protein K05782 benE; benzoate membrane transport protein D CVAR_0371 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D CVAR_2446 mntH; manganese transport protein K03322 mntH; manganese transport protein D CVAR_0948 dctT; TRAP dicarboxylate transporter subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CVAR_2932 arsT; putative arsenic-transport protein K03325 ACR3; arsenite transporter D CVAR_2323 putative membrane protein K03325 ACR3; arsenite transporter D CVAR_2485 mnhB; Na(+)/H(+) antiporter subunit B K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CVAR_2486 mnhC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CVAR_2487 mnhD; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CVAR_2489 mnhF; Na(+)/H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CVAR_2490 mnhG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CVAR_3020 putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D CVAR_2082 putative membrane protein K13936 mdcF; malonate transporter and related proteins D CVAR_1788 lysine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D CVAR_2897 putative membrane protein K05835 rhtC; threonine efflux protein D CVAR_3016 putative membrane protein K26605 azlC; branched chain amino acid efflux pump D CVAR_0910 putative membrane protein K26605 azlC; branched chain amino acid efflux pump D CVAR_0909 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D CVAR_3015 putative membrane protein K26606 azlD; branched chain amino acid efflux pump D CVAR_1065 putative membrane protein K22736 VIT; vacuolar iron transporter family protein D CVAR_0550 putative membrane protein K22736 VIT; vacuolar iron transporter family protein D CVAR_1161 ftsW; cell division protein K03588 ftsW; cell division protein FtsW D CVAR_1771 hypothetical protein K07243 FTR; high-affinity iron transporter D CVAR_1772 hypothetical protein K07224 efeO; iron uptake system component EfeO D CVAR_1773 iron-dependent peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D CVAR_1774 iron-dependent peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D CVAR_2727 Cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D CVAR_0320 putative protein-tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D CVAR_2033 putative membrane protein K03811 pnuC; nicotinamide mononucleotide transporter D CVAR_1226 putative membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D CVAR_2661 hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D CVAR_1562 putative secreted protein K07156 copC; copper resistance protein C C 02044 Secretion system [BR:cva02044] D CVAR_1517 putative membrane protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CVAR_2464 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CVAR_2463 hypothetical protein K12510 tadB; tight adherence protein B D CVAR_1168 hypothetical protein K02221 yggT; YggT family protein D CVAR_0933 putative membrane protein K02238 comEC; competence protein ComEC D CVAR_2320 sepP; putative serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CVAR_2302 hypothetical protein K14956 esx; ESAT-6 family protein D CVAR_2303 hypothetical protein K14956 esx; ESAT-6 family protein D CVAR_2167 secA1; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CVAR_1298 secA2; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CVAR_1543 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D CVAR_2416 secE; preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE D CVAR_1542 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D CVAR_1479 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG D CVAR_2334 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY D CVAR_1720 srp; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CVAR_1722 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D CVAR_1544 secN; protein-export membrane protein K03210 yajC; preprotein translocase subunit YajC D CVAR_2829 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_2873 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_3039 yidC; inner membrane protein translocase component K03217 yidC; YidC/Oxa1 family membrane protein insertase D CVAR_1977 tatA2; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D CVAR_1418 tatA1; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D CVAR_1979 tatB2; Sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D CVAR_1859 tatB1; Sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D CVAR_1978 tatC2; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC D CVAR_1417 tatC1; Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:cva02042] D CVAR_1304 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_0121 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_1305 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_0120 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_1061 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CVAR_0245 putative membrane protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:cva02022] D CVAR_2748 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CVAR_2747 two-component system response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CVAR_2072 mprA; two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA D CVAR_2171 mtrB; two-component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CVAR_2172 mtrA; two-component system response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CVAR_0539 phoS; two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CVAR_0538 phoR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D CVAR_0384 two-component system sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D CVAR_0385 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR D CVAR_1027 citA; two-component system sensor kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:cva02035] D CVAR_1517 putative membrane protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CVAR_2464 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cva04812] D CVAR_1165 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D CVAR_1277 scpA; segregation and condensation protein K03496 parA; chromosome partitioning protein D CVAR_3037 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein D CVAR_3036 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cva04147] D CVAR_2008 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CVAR_1483 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CVAR_1851 gapB; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CVAR_1482 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CVAR_1215 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CVAR_0056 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CVAR_1113 hypothetical protein K07192 FLOT; flotillin D CVAR_2290 groEL1; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_0474 groEL2; molecular chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CVAR_0331 dnaK; Molecular chaperone K04043 dnaK; molecular chaperone DnaK D CVAR_0678 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CVAR_2285 hypothetical protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CVAR_2286 guaB; inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CVAR_2402 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu D CVAR_2864 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CVAR_3011 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CVAR_2036 fadD8; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_0227 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_1053 fadD9; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CVAR_2084 fadA4; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0288 fadA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0893 pcaF; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_0954 fadA2; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_1234 fadA3; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2937 fadA5; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CVAR_2174 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CVAR_2333 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CVAR_1540 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CVAR_1256 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CVAR_1255 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CVAR_1263 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CVAR_0683 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CVAR_2209 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CVAR_1097 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_1118 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CVAR_2735 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CVAR_0147 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CVAR_1777 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CVAR_2102 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CVAR_0939 phdD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_2769 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CVAR_1815 etfA; electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D CVAR_1476 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CVAR_1481 tpi; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CVAR_2749 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CVAR_0087 putative secreted protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:cva02048] D CVAR_2693 DNA cytosine-5-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CVAR_1431 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D CVAR_2854 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CVAR_2530 hypothetical protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D CVAR_2793 hypothetical protein K07334 higB-1; toxin HigB-1 D CVAR_2794 hypothetical protein K21498 higA-1; antitoxin HigA-1 D CVAR_0757 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CVAR_1165 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D CVAR_1754 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_2544 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CVAR_1813 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:cva04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cva01504] D CVAR_0110 hypothetical protein K18230 tylC; macrolide transport system ATP-binding/permease protein D CVAR_0620 hypothetical protein K18232 oleC4; oleandomycin transport system ATP-binding protein D CVAR_2624 putative membrane protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cva00537] D CVAR_0147 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cva03100] D CVAR_t002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CVAR_t003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CVAR_t013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CVAR_t014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CVAR_t054 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t058 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CVAR_t023 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CVAR_t010 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CVAR_t011 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CVAR_t032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CVAR_t037 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CVAR_t039 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CVAR_t042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CVAR_t009 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CVAR_t035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CVAR_t036 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CVAR_t038 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CVAR_t006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t028 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t033 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t020 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CVAR_t017 tRNA-His K14226 tRNA-His; tRNA His D CVAR_t001 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CVAR_t015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t026 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t004 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CVAR_t008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CVAR_t016 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CVAR_t027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CVAR_t022 tRNA-Met K14230 tRNA-Met; tRNA Met D CVAR_t046 tRNA-Met K14230 tRNA-Met; tRNA Met D CVAR_t043 tRNA-Met K14230 tRNA-Met; tRNA Met D CVAR_t012 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CVAR_t021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CVAR_t025 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CVAR_t050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CVAR_t057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t056 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CVAR_t005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CVAR_t047 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CVAR_t007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CVAR_t049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CVAR_t045 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CVAR_t048 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CVAR_t059 tRNA-Val K14237 tRNA-Val; tRNA Val D CVAR_t029 tRNA-Val K14237 tRNA-Val; tRNA Val D CVAR_t031 tRNA-Val K14237 tRNA-Val; tRNA Val D CVAR_t034 tRNA-Val K14237 tRNA-Val; tRNA Val D CVAR_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r18 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CVAR_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CVAR_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r16 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CVAR_r15 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CVAR_1075 hypothetical protein K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D CVAR_2926 dprE2; decaprenylphosphoryl-beta-D-ribose 2-epimerase component K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D CVAR_0641 hypothetical protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CVAR_0119 hypothetical protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CVAR_1180 FAD-linked oxidoreductase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-] D CVAR_2925 dprE1; decaprenylphosphoryl-beta-D-ribose 2-epimerase component K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D CVAR_1765 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D CVAR_2548 hypothetical protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D CVAR_2418 putative secreted protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D CVAR_2531 putative dehydrogenase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D CVAR_3058 putative oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CVAR_1654 mtr; mycothiol reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D CVAR_2823 msrA2; Peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CVAR_2867 msrA; Peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CVAR_1565 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CVAR_1790 hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D CVAR_1560 putative secreted protein K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D CVAR_0741 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CVAR_2861 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CVAR_0434 hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D CVAR_0123 hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D CVAR_1595 ahpD; alkyl hydroperoxide reductase K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D CVAR_1594 ahpC; alkyl hydroperoxide reductase K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D CVAR_0275 hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D CVAR_0992 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CVAR_0025 tauD2; taurine dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D CVAR_0496 hmp; nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CVAR_2848 L-lysine 6-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D CVAR_1023 hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238] D CVAR_1019 hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238] D CVAR_1018 ferredoxin K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238] D CVAR_1022 ferredoxin K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238] D CVAR_1017 hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238] D CVAR_1021 hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238] D CVAR_2383 monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D CVAR_1807 hypothetical protein K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D CVAR_0721 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D CVAR_0447 fpr; ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CVAR_0650 hypothetical protein K18917 mrx1; mycoredoxin [EC:1.20.4.3] D CVAR_1313 cfa2; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CVAR_0654 cfa1; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CVAR_2569 cma; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CVAR_2907 cfa3; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CVAR_0150 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CVAR_0578 mshD; MshD acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D CVAR_1411 polyprenol-phosphate-mannose synthase domain 2 K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CVAR_1110 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D CVAR_0533 putative acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D CVAR_0626 putative secreted protein K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D CVAR_2751 mshA; MshA glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D CVAR_1214 hypothetical protein K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CVAR_1742 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CVAR_0588 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D CVAR_1098 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CVAR_1888 putative membrane protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D CVAR_2931 arsC; arsenate reductase K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D CVAR_0444 putative secreted protein K08095 CUT1_2_3; cutinase [EC:3.1.1.74] D CVAR_0713 hypothetical protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CVAR_0133 hypothetical protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CVAR_1050 hypothetical protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CVAR_0252 elrF; envelope lipids regulation factor K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D CVAR_0804 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CVAR_0426 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D CVAR_0931 gpmB; phosphoglycerate mutase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D CVAR_2053 tatD; deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CVAR_1821 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D CVAR_0878 lytA; autolysin K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CVAR_1498 defA; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CVAR_0466 defB; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CVAR_1950 pepI; proline iminopeptidase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101] D CVAR_1875 mshB; MshB deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D CVAR_1941 mycothiol conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D CVAR_0372 hypothetical protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CVAR_2660 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CVAR_1893 hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53] D CVAR_2186 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CVAR_2984 fadD4; acyl-CoA synthetase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D CVAR_1445 mshC; MshC ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D CVAR_0255 accD3; acyl-CoA carboxylase beta subunit K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-] D CVAR_2204 accD1; acyl-CoA carboxylase complex subunit K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.- 2.1.3.-] D CVAR_0789 putative membrane protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D CVAR_0643 putative membrane protein K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] D CVAR_0358 ctpA; heavy metal translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] C 99981 Carbohydrate metabolism D CVAR_0308 hypothetical protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D CVAR_0307 hypothetical protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D CVAR_0306 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D CVAR_2346 fdhD; formate dehydrogenase subunit K02379 fdhD; FdhD protein D CVAR_1463 nifU; NifU-like protein involved in Fe-S cluster formation K04488 iscU; nitrogen fixation protein NifU and related proteins D CVAR_1816 etfB; electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D CVAR_2703 putative pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase D CVAR_2783 putative pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase D CVAR_3032 putative pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D CVAR_2986 fadE9; acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase D CVAR_0796 cmrA; Corynebacterineae mycolate reductase A K27306 cmrA; mycolic acid reductase C 99984 Nucleotide metabolism D CVAR_0221 nrdI1; protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction D CVAR_0719 nrdI2; protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D CVAR_2960 hypothetical protein K08234 yaeR; glyoxylase I family protein D CVAR_0591 hypothetical protein K06997 yggS; PLP dependent protein D CVAR_1769 hypothetical protein K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D CVAR_0622 resuscitation-promoting factor K21687 rpfA; resuscitation-promoting factor RpfA D CVAR_2052 rpfB; resuscitation-promoting factor K21688 rpfB; resuscitation-promoting factor RpfB D CVAR_0261 putative membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D CVAR_0030 hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein D CVAR_0692 putative membrane protein K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D CVAR_2270 estB; secreted esterase B K03932 lpqC; polyhydroxybutyrate depolymerase C 99999 Others D CVAR_0115 putative membrane protein K15977 K15977; putative oxidoreductase D CVAR_2064 putative membrane protein K15977 K15977; putative oxidoreductase D CVAR_1789 putative membrane protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CVAR_0093 cspA2; cold shock-like protein A K03704 cspA; cold shock protein D CVAR_0623 cspB; cold shock-like protein B K03704 cspA; cold shock protein D CVAR_2456 cspA; cold shock-like protein A K03704 cspA; cold shock protein D CVAR_1714 hypothetical protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CVAR_0730 clpS; ATP-dependent Clp protease adapter protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CVAR_0888 tig; trigger factor K03545 tig; trigger factor D CVAR_2592 ureF; urease accessory protein K03188 ureF; urease accessory protein D CVAR_2591 ureG; urease accessory protein K03189 ureG; urease accessory protein D CVAR_2590 ureD; urease accessory protein K03190 ureD; urease accessory protein D CVAR_0698 hypothetical protein K03664 smpB; SsrA-binding protein D CVAR_0717 nrdH1; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH D CVAR_0848 nrdH2; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH D CVAR_1707 hypothetical protein K07391 comM; magnesium chelatase family protein D CVAR_2726 ccsB; membrane protein required for cytochrome c biosynthesis K07399 resB; cytochrome c biogenesis protein D CVAR_2579 xdhC; xanthine dehydrogenase subunit K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D CVAR_1708 hypothetical protein K07460 yraN; putative endonuclease D CVAR_1430 hypothetical protein K07465 K07465; putative RecB family exonuclease D CVAR_1706 hypothetical protein K04096 smf; DNA processing protein D CVAR_1522 hypothetical protein K07478 ycaJ; putative ATPase D CVAR_0075 transposase for insertion sequence element K18320 IS15; transposase, IS6 family D CVAR_0070 transposase for insertion sequence element K07483 K07483; transposase D CVAR_0078 transposase for insertion sequence element K07483 K07483; transposase D CVAR_0776 transposase for insertion sequence element K07483 K07483; transposase D CVAR_1386 transposase for insertion sequence element K07483 K07483; transposase D CVAR_0980 transposase for insertion sequence element K07483 K07483; transposase D CVAR_1902 transposase for insertion sequence element K07483 K07483; transposase D CVAR_2832 transposase for insertion sequence element K07483 K07483; transposase D CVAR_2789 transposase for insertion sequence element K07483 K07483; transposase D CVAR_2967 transposase for insertion sequence element K07483 K07483; transposase D CVAR_2975 transposase for insertion sequence element K07483 K07483; transposase D CVAR_0082 transposase for insertion sequence element K07483 K07483; transposase D CVAR_1362 transposase for insertion sequence element K07483 K07483; transposase D CVAR_1907 transposase for insertion sequence element K07483 K07483; transposase D CVAR_1379 transposase for insertion sequence element K07483 K07483; transposase D CVAR_2797 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_2849 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_2469 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_2621 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_2788 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_2971 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_3035 hypothetical protein K07493 K07493; putative transposase D CVAR_0411 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_0778 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_1354 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_1359 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_0618 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_1908 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_1909 transposase for insertion sequence element K07493 K07493; putative transposase D CVAR_2966 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_2791 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_2974 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_2976 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_2977 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_0071 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_0081 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_0085 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_1363 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_0813 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_1905 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_1442 transposase for insertion sequence element K07497 K07497; putative transposase D CVAR_1399 hypothetical protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CVAR_1622 hypothetical protein K03969 pspA; phage shock protein A D CVAR_2134 hypothetical protein K07504 K07504; predicted type IV restriction endonuclease D CVAR_2522 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CVAR_1850 pheP; L-phenylalanine permease K03293 TC.AAT; amino acid transporter, AAT family D CVAR_1026 citP; citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D CVAR_2711 pitB; phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D CVAR_1260 putative membrane protein K03307 TC.SSS; solute:Na+ symporter, SSS family D CVAR_1914 metP; methionine and alanine importer large subunit K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CVAR_1729 glyP; transport protein of the alanine or glycine:cation symporter family K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CVAR_1690 alaP; sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CVAR_1794 putative membrane protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CVAR_2626 uridine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D CVAR_2972 putative membrane protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D CVAR_2317 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D CVAR_0364 putative DNA recombinase K06400 spoIVCA; site-specific DNA recombinase D CVAR_0621 putative recombinase K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D CVAR_1877 hypothetical protein K06207 typA; GTP-binding protein D CVAR_1457 hypothetical protein K07166 K07166; ACT domain-containing protein D CVAR_1059 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CVAR_1929 hypothetical protein K07175 phoH2; PhoH-like ATPase D CVAR_1763 hypothetical protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D CVAR_2894 putative secreted protein K07273 acm; lysozyme D CVAR_1334 putative secreted protein K07273 acm; lysozyme C 99994 Others D CVAR_0584 phoU; Phosphate uptake regulator K02039 phoU; phosphate transport system protein D CVAR_1626 putative membrane protein K05794 terC; tellurite resistance protein TerC D CVAR_0940 putative dimethylaniline monooxygenase K07222 K07222; putative flavoprotein involved in K+ transport D CVAR_2681 putative oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D CVAR_2933 putative flavoprotein involved in K+ transport K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D CVAR_0406 hypothetical protein K02348 elaA; ElaA protein D CVAR_3060 hypothetical protein K02348 elaA; ElaA protein D CVAR_2457 hypothetical protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D CVAR_0807 glbO; hemoglobin-like protein K06886 glbN; hemoglobin D CVAR_0190 mmpL2; drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily D CVAR_0088 mmpL1; drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily D CVAR_0662 putative membrane protein K06994 K06994; putative drug exporter of the RND superfamily D CVAR_2031 mmpL4; drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily D CVAR_2551 mmpL5; drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily D CVAR_1467 sufB; ABC-type transport system involved in Fe-S cluster assembly permease component K09014 sufB; Fe-S cluster assembly protein SufB D CVAR_1466 sufD; hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D CVAR_2236 putative membrane protein K07058 K07058; membrane protein D CVAR_0274 putative secreted protein K07058 K07058; membrane protein D CVAR_1412 putative membrane protein K07113 fxsA; UPF0716 protein FxsA D CVAR_0443 hypothetical protein K07146 K07146; UPF0176 protein D CVAR_0226 hypothetical protein K04750 phnB; PhnB protein D CVAR_1314 putative membrane protein K03975 dedA; membrane-associated protein D CVAR_1863 putative membrane protein K03975 dedA; membrane-associated protein D CVAR_1993 putative membrane protein K01421 yhgE; putative membrane protein D CVAR_1994 putative membrane protein K01421 yhgE; putative membrane protein D CVAR_2736 putative membrane protein K01421 yhgE; putative membrane protein D CVAR_1093 putative membrane protein K00389 yidH; putative membrane protein D CVAR_0744 putative membrane protein K08972 K08972; putative membrane protein D CVAR_1227 putative membrane protein K08974 K08974; putative membrane protein D CVAR_0414 putative membrane protein K08981 K08981; putative membrane protein D CVAR_0125 putative secreted protein K08987 K08987; putative membrane protein D CVAR_1887 hypothetical protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D CVAR_0263 hypothetical protein K06860 K06860; putative heme uptake system protein D CVAR_1054 hypothetical protein K06867 K06867; uncharacterized protein D CVAR_1996 putative membrane protein K06867 K06867; uncharacterized protein D CVAR_1426 hypothetical protein K06888 K06888; uncharacterized protein D CVAR_0653 putative amine oxidase K06954 K06954; uncharacterized protein D CVAR_0982 hypothetical protein K06975 K06975; uncharacterized protein D CVAR_2895 hypothetical protein K06996 K06996; uncharacterized protein D CVAR_2641 hypothetical protein K07005 K07005; uncharacterized protein D CVAR_1986 pyridoxine 5-phosphate oxidase K07006 K07006; uncharacterized protein D CVAR_0220 hypothetical protein K07006 K07006; uncharacterized protein D CVAR_1533 hypothetical protein K07054 K07054; uncharacterized protein D CVAR_2692 hypothetical protein K07071 K07071; uncharacterized protein D CVAR_0768 hypothetical protein K07075 K07075; uncharacterized protein D CVAR_1316 hypothetical protein K07077 K07077; uncharacterized protein D CVAR_0454 cysZ; putative membrane protein K07090 K07090; uncharacterized protein D CVAR_1105 putative membrane protein K07090 K07090; uncharacterized protein D CVAR_0806 putative membrane protein K07090 K07090; uncharacterized protein D CVAR_2627 hypothetical protein K07093 K07093; uncharacterized protein D CVAR_2482 putative secreted protein K07098 K07098; uncharacterized protein D CVAR_1318 gpt; purine phosphoribosyltransferase K07101 K07101; uncharacterized protein D CVAR_2454 hypothetical protein K07118 K07118; uncharacterized protein D CVAR_0743 putative membrane protein K07120 K07120; uncharacterized protein D CVAR_2547 hypothetical protein K07140 K07140; MOSC domain-containing protein D CVAR_1091 hypothetical protein K07164 K07164; uncharacterized protein D CVAR_3080 hypothetical protein K08998 K08998; uncharacterized protein D CVAR_2006 hypothetical protein K09009 K09009; uncharacterized protein D CVAR_2136 putative membrane protein K09118 K09118; uncharacterized protein D CVAR_1878 hypothetical protein K09146 K09146; uncharacterized protein D CVAR_1458 hypothetical protein K09157 K09157; uncharacterized protein D CVAR_1002 hypothetical protein K09164 K09164; uncharacterized protein D CVAR_0413 putative membrane protein K09167 K09167; uncharacterized protein D CVAR_1669 hypothetical protein K09384 K09384; uncharacterized protein D CVAR_1670 hypothetical protein K09384 K09384; uncharacterized protein D CVAR_0494 hypothetical protein K09764 K09764; uncharacterized protein D CVAR_1883 putative membrane protein K09781 K09781; uncharacterized protein D CVAR_1257 hypothetical protein K09791 K09791; uncharacterized protein D CVAR_1648 hypothetical protein K09861 K09861; uncharacterized protein D CVAR_2520 hypothetical protein K09975 K09975; uncharacterized protein D CVAR_1643 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 7, 2024