+E Replication protein KO #

  DNA Replication Proteins - Oryza sativa japonica (Japanese rice) (RAPDB)

% ! AEukaryotic type B DNA Replication Initiation Factors C pre-RC (pre-replication complex) D Os03t0184700-01 Os03g0184700; Origin recognition complex subunit 2 (Origin recognition complex2). K02604 ORC2; origin recognition complex subunit 2 D Os10t0402200-00 Os10g0402200; Origin recognition complex subunit 3, N-terminal domain containing protein. K02605 ORC3; origin recognition complex subunit 3 D Os01t0683400-01 Os01g0683400; Similar to Origin recognition complex 4. K02606 ORC4; origin recognition complex subunit 4 D Os03t0759500-01 Os03g0759500; Origin recognition complex 5. K02607 ORC5; origin recognition complex subunit 5 D Os07t0628600-00 Os07g0628600; Origin recognition complex subunit 6 family protein. K02608 ORC6; origin recognition complex subunit 6 D Os10t0489900-01 Os10g0489900; Similar to CDT1a protein. K10727 CDT1; chromatin licensing and DNA replication factor 1 D Os04t0185100-01 Os04g0185100; DNA replication factor CDT1-like domain containing protein. K10727 CDT1; chromatin licensing and DNA replication factor 1 D Os01t0856000-01 Os01g0856000; Similar to CDC6 protein. K02213 CDC6; cell division control protein 6 D Os11t0484300-01 Os11g0484300; Similar to Mcm2-prov protein. K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3] D Os05t0476200-01 Os05g0476200; Similar to DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment). K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3] D Os01t0544450-01 Os01g0544450; Similar to DNA replication licensing factor mcm4. K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3] D Os02t0797400-01 Os02g0797400; MCM family protein. K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3] D Os05t0235800-01 Os05g0235800; DNA-dependent ATPase MCM domain containing protein. K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3] D Os12t0560700-01 Os12g0560700; Similar to PROLIFERA protein. K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3] C CDK (cyclin dependent kinase) D Os03t0208700-00 Os03g0208700; Similar to cyclin-A2. K06627 CCNA; cyclin-A D Os03t0208800-00 Os03g0208800; Cyclin, C-terminal domain containing protein. K06627 CCNA; cyclin-A D Os03t0607600-00 Os03g0607600; Similar to Cyclin-A3-1. K06627 CCNA; cyclin-A D Os02t0607000-00 Os02g0607000; Putative cyclin-F2-1. K06627 CCNA; cyclin-A D Os01t0233100-00 Os01g0233100; Similar to Cyclin-A1-2. K06627 CCNA; cyclin-A D Os01t0233500-01 Os01g0233500; Cyclin. K06627 CCNA; cyclin-A D Os12t0298950-00 Os12g0298950; Similar to Cyclin-A1-3. K06627 CCNA; cyclin-A D Os12t0502300-01 Os12g0502300; Similar to Cyclin A-like protein (Fragment). K06627 CCNA; cyclin-A D Os12t0581800-01 Os12g0581800; Cyclin, A/B/D/E domain containing protein. K06627 CCNA; cyclin-A D Os02t0123100-01 Os02g0123100; Similar to cDNA clone:J033034K16, full insert sequence. K02206 CDK2; cyclin-dependent kinase 2 [EC:2.7.11.22] D Os03t0118400-01 Os03g0118400; Similar to Cyclin-dependent kinase A-1. K02206 CDK2; cyclin-dependent kinase 2 [EC:2.7.11.22] C DDK (Dbf-4 dependent kinase) D Os10t0563500-01 Os10g0563500; Protein kinase, core domain containing protein. K02214 CDC7; cell division control protein 7 [EC:2.7.11.1] C GINS complex D Os05t0453900-00 Os05g0453900; Similar to DNA replication complex GINS protein PSF1. K10732 GINS1; GINS complex subunit 1 D Os01t0248600-01 Os01g0248600; GINS complex, Psf2 component family protein. K10733 GINS2; GINS complex subunit 2 D Os08t0274700-01 Os08g0274700; Similar to TTN10. K10734 GINS3; GINS complex subunit 3 D Os05t0143400-01 Os05g0143400; Similar to SLD5. K10735 GINS4; GINS complex subunit 4 C Other initiation factors D Os07t0689950-00 Os07g0689950; BRCT domain containing protein. K10728 TOPBP1; topoisomerase (DNA) II binding protein 1 D Os03t0304400-01 Os03g0304400; Zinc finger, RING/FYVE/PHD-type domain containing protein. K10728 TOPBP1; topoisomerase (DNA) II binding protein 1 D Os04t0486800-01 Os04g0486800; Similar to predicted protein. K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4] D Os11t0128400-01 Os11g0128400; CDC45-like protein family protein. K06628 CDC45; cell division control protein 45 D Os12t0124700-01 Os12g0124700; CDC45-like protein family protein. K06628 CDC45; cell division control protein 45 D Os05t0464100-01 Os05g0464100; MCM family protein. K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4] D Os06t0218500-01 Os06g0218500; MCM family protein. K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4] D Os09t0539400-00 Os09g0539400; Similar to MCM10 minichromosome maintenance deficient 10. K10736 MCM10; minichromosome maintenance protein 10 B DNA Replication Elongation Factors C DNA polymerase alpha / primase complex D Os01t0868300-01 Os01g0868300; Similar to DNA polymerase alpha catalytic subunit (EC 2.7.7.7). K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7] D Os12t0242900-01 Os12g0242900; DNA polymerase alpha, subunit B domain containing protein. K02321 POLA2; DNA polymerase alpha subunit B D Os07t0406800-01 Os07g0406800; DNA primase, large subunit, eukaryotic domain containing protein. K02685 PRI2; DNA primase large subunit C DNA polymerase epsilon complex D Os02t0511901-00 Os02g0511901; Similar to DNA polymerase. K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] D Os05t0160800-01 Os05g0160800; Similar to DNA polymerase epsilon subunit 2. K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] D Os09t0568200-01 Os09g0568200; Similar to DNA polymerase epsilon subunit 3. K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] C DNA polymerase delta complex D Os11t0186400-00 Os11g0186400; Similar to DNA polymerase delta catalytic subunit (EC 2.7.7.7). K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] D Os03t0128500-01 Os03g0128500; Similar to DNA polymerase delta small subunit (EC 2.7.7.7). K02328 POLD2; DNA polymerase delta subunit 2 D Os01t0204000-01 Os01g0204000; DNA polymerase subunit Cdc27 domain containing protein. K03504 POLD3; DNA polymerase delta subunit 3 D Os09t0520100-01 Os09g0520100; DNA polymerase delta, subunit 4 family protein. K03505 POLD4; DNA polymerase delta subunit 4 D Os08t0163300-00 Os08g0163300; Similar to delta DNA polymerase. K03505 POLD4; DNA polymerase delta subunit 4 C DNA polymerase gamma complex (mitochondrial) C RPA (replication protein A) D Os05t0111000-01 Os05g0111000; Similar to Gag polyprotein [Contains: Core protein p15 (Matrix protein); Core protein p24; Core protein p12]. K07466 RFA1; replication factor A1 D Os02t0776800-01 Os02g0776800; Replication protein A 70 kDa, Meiotic and somatic DNA repair K07466 RFA1; replication factor A1 D Os03t0214100-01 Os03g0214100; Replication protein A1. K07466 RFA1; replication factor A1 D Os02t0829100-01 Os02g0829100; Replication protein A 30kDa. K10739 RFA2; replication factor A2 D Os02t0633400-01 Os02g0633400; Similar to 61 kDa protein homolog. K10739 RFA2; replication factor A2 D Os01t0253600-01 Os01g0253600; Replication factor A protein 3 domain containing protein. K10740 RPA3; replication factor A3 C RFC (replication factor C) D Os11t0572100-01 Os11g0572100; Similar to DNA ligase (EC 6.5.1.2). K10754 RFC1; replication factor C subunit 1 D Os12t0176500-01 Os12g0176500; Similar to Replication factor C subunit RFC4. K10755 RFC2_4; replication factor C subunit 2/4 D Os04t0569000-01 Os04g0569000; Similar to Replication factor C 40kDa subunit. K10755 RFC2_4; replication factor C subunit 2/4 D Os03t0792600-01 Os03g0792600; ATPase, AAA+ type, core domain containing protein. K10756 RFC3_5; replication factor C subunit 3/5 D Os10t0574500-00 Os10g0574500; DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal domain containing protein. K10756 RFC3_5; replication factor C subunit 3/5 D Os02t0775200-01 Os02g0775200; Similar to Activator 1 36 kDa subunit (Replication factor C 36 kDa subunit) (A1 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36) (Replication factor C subunit 5). K10756 RFC3_5; replication factor C subunit 3/5 C RNase H D Os11t0153900-01 Os11g0153900; Ribonuclease HII/HIII family protein. K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4] D Os02t0168900-01 Os02g0168900; Ribonuclease H2, subunit C domain containing protein. K10745 RNASEH2C; ribonuclease H2 subunit C C Other elongation factors D Os02t0805200-01 Os02g0805200; Proliferating cell nuclear antigen (PCNA) (Cyclin). K04802 PCNA; proliferating cell nuclear antigen D Os04t0588200-00 Os04g0588200; Similar to emb2411 (embryo defective 2411); ATP binding / ATP-dependent DNA helicase/ DNA binding. K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] D Os05t0540100-01 Os05g0540100; Flap endonuclease-1a (EC 3.-.-.-) (OsFEN-1a). K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Os03t0834000-01 Os03g0834000; Flap endonuclease-1b (EC 3.-.-.-) (OsFEN-1b). K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Os01t0777300-00 Os01g0777300; DNA repair protein (XPGC)/yeast Rad family protein. K10746 EXO1; exonuclease 1 [EC:3.1.-.-] D Os10t0489200-01 Os10g0489200; Similar to DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]). K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Os03t0262300-01 Os03g0262300; Hypothetical conserved gene. K26118 ATAD5; ATPase family AAA domain-containing protein 5 B DNA Replication Termination Factors C DNA methylation enzymes D Os03t0226800-01 Os03g0226800; Similar to Cytosine-specific methyltransferase. K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Os05t0149200-01 Os05g0149200; PWWP domain containing protein. K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37] C Prevention of re-replication factors D Os03t0225200-01 Os03g0225200; Cyclin, A/B/D/E domain containing protein. K21777 CCNB; G2/mitotic-specific cyclin-B, other D Os01t0805600-01 Os01g0805600; Similar to Cyclin-B1-1. K21777 CCNB; G2/mitotic-specific cyclin-B, other D Os05t0493500-00 Os05g0493500; Similar to Cyclin-B1-5. K21777 CCNB; G2/mitotic-specific cyclin-B, other D Os04t0563700-01 Os04g0563700; Cyclin. K21777 CCNB; G2/mitotic-specific cyclin-B, other D Os06t0726800-01 Os06g0726800; G2/mitotic-specific cyclin 2 (B-like cyclin) (CycOs2). K21777 CCNB; G2/mitotic-specific cyclin-B, other D Os01t0281200-01 Os01g0281200; Similar to Type B-like cyclin (Fragment). K21777 CCNB; G2/mitotic-specific cyclin-B, other D Os02t0627800-00 Os02g0627800; Similar to Isoform 2 of Cyclin-B1-3. K21777 CCNB; G2/mitotic-specific cyclin-B, other C Telomere proteins D Shelterin complex E Os06t0181300-01 Os06g0181300; Similar to terminal acidic SANT 1. K11111 TERF2; telomeric repeat-binding factor 2 D TERB1-TERB2-MAJIN complex D CST complex (animals) E Os03t0366900-01 Os03g0366900; Nucleic acid-binding, OB-fold domain containing protein. K23312 STN1; CST complex subunit STN1 D CST complex (yeast) D RIF proteins D SIR proteins C Telomerase complex (animals) D Dyskerin complex E Os11t0579800-01 Os11g0579800; Gar1 protein RNA-binding region family protein. K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 E Os06t0274200-01 Os06g0274200; Similar to H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP protein NHP2) (High mobility group-like nuclear protein 2). K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 E Os02t0728600-01 Os02g0728600; Similar to H/ACA ribonucleoprotein complex subunit 2. K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 E Os02t0618250-01 Os02g0618250; Similar to H/ACA ribonucleoprotein complex subunit 3-like protein. K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 E Os04t0576300-01 Os04g0576300; tRNA pseudouridine synthase B, N-terminal domain containing protein. K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] E Os11t0598700-00 Os11g0598700; Similar to predicted protein. K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] E Os03t0370500-02 Os03g0370500; Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57). K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] E Os07t0636000-01 Os07g0636000; Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57). K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] C Telomerase complex (fungi) D Sm core complex E Os02t0586500-01 Os02g0586500; Similar to OSIGBa0124N08.5 protein. K11087 SNRPD1; small nuclear ribonucleoprotein D1 E Os01t0967000-00 Os01g0967000; Similar to Small nuclear ribonucleoprotein-like protein. K11096 SNRPD2; small nuclear ribonucleoprotein D2 E Os05t0314100-02 Os05g0314100; Similar to Small nuclear ribonucleoprotein-like protein. K11096 SNRPD2; small nuclear ribonucleoprotein D2 E Os02t0102700-01 Os02g0102700; Similar to AGL157Cp. K11088 SNRPD3; small nuclear ribonucleoprotein D3 E Os03t0240800-01 Os03g0240800; Similar to AGL157Cp. K11088 SNRPD3; small nuclear ribonucleoprotein D3 E Os02t0126700-01 Os02g0126700; Similar to Small nuclear ribonucleoprotein homolog. K11097 SNRPE; small nuclear ribonucleoprotein E E Os08t0151400-01 Os08g0151400; Similar to Small nuclear ribonucleoprotein homolog. K11097 SNRPE; small nuclear ribonucleoprotein E E Os02t0177500-01 Os02g0177500; Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF). K11098 SNRPF; small nuclear ribonucleoprotein F E Os11t0657300-01 Os11g0657300; Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF). K11098 SNRPF; small nuclear ribonucleoprotein F E Os07t0608700-01 Os07g0608700; Similar to Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG). K11099 SNRPG; small nuclear ribonucleoprotein G E Os03t0410900-01 Os03g0410900; Like-Sm ribonucleoprotein, core family protein. K11099 SNRPG; small nuclear ribonucleoprotein G C ELG1-RFC complex D Os12t0176500-01 Os12g0176500; Similar to Replication factor C subunit RFC4. K10755 RFC2_4; replication factor C subunit 2/4 D Os04t0569000-01 Os04g0569000; Similar to Replication factor C 40kDa subunit. K10755 RFC2_4; replication factor C subunit 2/4 D Os03t0792600-01 Os03g0792600; ATPase, AAA+ type, core domain containing protein. K10756 RFC3_5; replication factor C subunit 3/5 D Os10t0574500-00 Os10g0574500; DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal domain containing protein. K10756 RFC3_5; replication factor C subunit 3/5 D Os02t0775200-01 Os02g0775200; Similar to Activator 1 36 kDa subunit (Replication factor C 36 kDa subunit) (A1 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36) (Replication factor C subunit 5). K10756 RFC3_5; replication factor C subunit 3/5 C MRN complex D Os04t0635900-01 Os04g0635900; DNA repair exonuclease family protein. K10865 MRE11; double-strand break repair protein MRE11 D Os08t0177600-00 Os08g0177600; Similar to double-strand break repair protein MRE11. K10865 MRE11; double-strand break repair protein MRE11 D Os10t0487300-01 Os10g0487300; Forkhead-associated domain containing protein. K10867 NBN; nibrin C Other termination factors D Os01t0106700-00 Os01g0106700; Hypothetical conserved gene. K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D Os05t0150600-01 Os05g0150600; Hypothetical conserved gene. K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4] D Os02t0780800-01 Os02g0780800; Hypothetical conserved gene. K10901 BLM; bloom syndrome protein [EC:5.6.2.4] D Os04t0433800-01 Os04g0433800; Similar to RECQ4A; ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding. K10901 BLM; bloom syndrome protein [EC:5.6.2.4] D Os03t0100400-01 Os03g0100400; Similar to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair protein XP-F homolog). K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Os07t0413700-01 Os07g0413700; Similar to Poly(ADP)-ribose polymerase (EC 2.4.2.30). K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30] D Os02t0530600-01 Os02g0530600; Poly(ADP-ribose) polymerase, regulatory region domain containing protein. K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] D Os01t0351100-00 Os01g0351100; Similar to Poly. K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] D Os01t0351200-00 Os01g0351200; Similar to Poly. K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] D Os03t0125300-01 Os03g0125300; D111/G-patch domain containing protein. K11135 PINX1; Pin2-interacting protein X1 D Os02t0598800-00 Os02g0598800; Telomere length regulation protein, conserved domain domain containing protein. K11137 TELO2; telomere length regulation protein D Os01t0260700-01 Os01g0260700; Similar to PUR ALPHA-1. K21772 PURA; transcriptional activator protein Pur-alpha D Os03t0738000-01 Os03g0738000; WD40 repeat-like domain containing protein. K23314 WRAP53; telomerase Cajal body protein 1 D Os01t0681600-01 Os01g0681600; Hypothetical conserved gene. K25059 SDE2; replication stress response regulator SDE2 D Os06t0183900-01 Os06g0183900; Protein of unknown function DUF602 family protein. K25186 RTF2; replication termination factor 2 B DNA Topoisomerases C Os08t0154600-01 Os08g0154600; Similar to Topoisomerase I. K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1] C Os02t0699700-01 Os02g0699700; Similar to DNA topoisomerase II. K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2] C Os03t0165000-00 Os03g0165000; Similar to DNA topoisomerase family protein, expressed. K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] C Os09t0500600-01 Os09g0500600; Similar to DNA topoisomerase III beta-1 (EC 5.99.1.2). Splice isoform 2. K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] # AProkaryotic type B DNA Replication Initiation Factors C Initiation factors (bacterial) D Os01t0642900-01 Os01g0642900; Nucleic acid-binding, OB-fold domain containing protein. K03111 ssb; single-strand DNA-binding protein C Initiation factors (archaeal) B DNA Replication Elongation Factors C Elongation factors (bacterial) D DNA polymerase III holoenzyme D RNase H D Other elongation factors E Os08t0175300-01 Os08g0175300; PolI-like DNA polymerase. K02335 polA; DNA polymerase I [EC:2.7.7.7] C Elongation factors (archaeal) D B-family DNA polymerases D D-family DNA polymerases D RNase H D RFC (replication factor C) D Other elongation factors E Os04t0588200-00 Os04g0588200; Similar to emb2411 (embryo defective 2411); ATP binding / ATP-dependent DNA helicase/ DNA binding. K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] E Os05t0540100-01 Os05g0540100; Flap endonuclease-1a (EC 3.-.-.-) (OsFEN-1a). K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E Os03t0834000-01 Os03g0834000; Flap endonuclease-1b (EC 3.-.-.-) (OsFEN-1b). K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E Os10t0489200-01 Os10g0489200; Similar to DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]). K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] B DNA Replication Termination Factors C Terminus site-binding protein C DNA methylation enzymes C Prevention of re-replication factors B DNA Topoisomerases C Os01t0268300-01 Os01g0268300; Similar to DNA gyrase B subunit. K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] C Os09t0279600-01 Os09g0279600; Similar to Topoisomerase 6 subunit B. K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022