+D GENES KO
#
KEGG Orthology (KO) - Gardnerella vaginalis HMP9231
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:gvh00010]
D HMPREF9231_0053 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0673 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0314 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9231_1338 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF9231_0795 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF9231_0370 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF9231_0796 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF9231_1017 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9231_0846 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9231_0596 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF9231_1027 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0845 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0240 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9231_0731 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF9231_0368 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF9231_1023 hypothetical protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D HMPREF9231_1168 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9231_0774 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
C 00020 Citrate cycle (TCA cycle)
D HMPREF9231_0988 FAD binding domain protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF9231_0611 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
C 00030 Pentose phosphate pathway [PATH:gvh00030]
D HMPREF9231_0314 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9231_0195 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF9231_0193 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D HMPREF9231_0192 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF9231_1258 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF9231_0758 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF9231_0780 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF9231_0781 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HMPREF9231_1170 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF9231_0283 putative 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D HMPREF9231_0974 xfp; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D HMPREF9231_0152 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HMPREF9231_0377 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF9231_0080 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF9231_0149 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF9231_1168 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9231_0708 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF9231_0378 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF9231_1260 aroK; shikimate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D HMPREF9231_1338 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
C 00040 Pentose and glucuronate interconversions [PATH:gvh00040]
D HMPREF9231_0746 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9231_1182 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HMPREF9231_0758 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF9231_1181 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D HMPREF9231_0278 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D HMPREF9231_0874 putative dihydrodipicolinate synthase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
C 00051 Fructose and mannose metabolism [PATH:gvh00051]
D HMPREF9231_0350 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF9231_0871 oxidoreductase, short chain dehydrogenase/reductase family protein K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D HMPREF9231_0870 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D HMPREF9231_1338 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF9231_0795 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:gvh00052]
D HMPREF9231_0368 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF9231_0357 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF9231_0439 galT; UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF9231_0356 galT; UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF9231_0364 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF9231_0746 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9231_1168 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9231_0053 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0673 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_1385 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9231_0275 Beta galactosidase small chain K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D HMPREF9231_0276 hypothetical protein K12112 ebgC; evolved beta-galactosidase subunit beta
D HMPREF9231_1143 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HMPREF9231_0082 alpha amylase, catalytic domain protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:gvh00053]
D HMPREF9231_0676 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF9231_1182 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:gvh00500]
D HMPREF9231_0746 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9231_0359 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF9231_0586 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF9231_0024 glgP; phosphorylase, glycogen/starch/alpha-glucan family K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HMPREF9231_1311 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D HMPREF9231_0306 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D HMPREF9231_0972 alpha amylase, catalytic domain protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D HMPREF9231_1307 alpha amylase, catalytic domain protein K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D HMPREF9231_0650 cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D HMPREF9231_0106 putative neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D HMPREF9231_0082 alpha amylase, catalytic domain protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D HMPREF9231_0237 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HMPREF9231_0120 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HMPREF9231_0274 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D HMPREF9231_0984 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D HMPREF9231_1168 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9231_0053 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0673 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0314 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9231_0350 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:gvh00520]
D HMPREF9231_0061 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HMPREF9231_0060 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HMPREF9231_0350 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF9231_0647 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF9231_1123 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HMPREF9231_0599 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF9231_1225 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF9231_0227 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF9231_0054 putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HMPREF9231_0053 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0673 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0774 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D HMPREF9231_1168 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9231_0746 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9231_0357 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF9231_0439 galT; UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF9231_0356 galT; UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF9231_0364 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF9231_1143 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HMPREF9231_0314 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:gvh00620]
D HMPREF9231_0919 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF9231_0240 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9231_0731 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF9231_0976 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF9231_0975 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9231_0596 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF9231_0303 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF9231_1027 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0845 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0029 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:gvh00630]
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HMPREF9231_0304 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HMPREF9231_0303 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF9231_0751 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HMPREF9231_1033 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_1121 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_0868 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00640 Propanoate metabolism [PATH:gvh00640]
D HMPREF9231_0976 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF9231_0975 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9231_0919 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF9231_0303 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF9231_0304 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HMPREF9231_1027 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0845 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0868 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:gvh00650]
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HMPREF9231_0240 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9231_0988 FAD binding domain protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF9231_0611 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF9231_0570 alcohol dehydrogenase, iron-dependent K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D HMPREF9231_0919 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF9231_0430 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D HMPREF9231_0674 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism
D HMPREF9231_0674 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00562 Inositol phosphate metabolism [PATH:gvh00562]
D HMPREF9231_0775 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF9231_1287 putative inositol 1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D HMPREF9231_0795 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:gvh00190]
D HMPREF9231_0988 FAD binding domain protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF9231_0611 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF9231_0137 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF9231_0139 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF9231_0138 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF9231_0136 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF9231_0140 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF9231_0133 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF9231_0135 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF9231_0134 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF9231_0197 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D HMPREF9231_1363 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:gvh00680]
D HMPREF9231_0846 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9231_0029 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF9231_1338 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF9231_0283 putative 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D HMPREF9231_0976 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF9231_0975 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9231_1017 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9231_0776 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:gvh00910]
D HMPREF9231_1033 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_1121 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_0030 cah; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:gvh00920]
D HMPREF9231_0849 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D HMPREF9231_0848 ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D HMPREF9231_0850 ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D HMPREF9231_0552 putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF9231_0553 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:gvh00061]
D HMPREF9231_0303 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF9231_0305 MaoC-like protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D HMPREF9231_0620 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0834 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0766 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:gvh00071]
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HMPREF9231_0620 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0834 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0766 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0240 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9231_0731 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:gvh00561]
D HMPREF9231_0959 HAD hydrolase, family IIA K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D HMPREF9231_0950 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF9231_1010 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF9231_1119 glycosyltransferase, group 2 family protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
C 00564 Glycerophospholipid metabolism [PATH:gvh00564]
D HMPREF9231_1244 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HMPREF9231_0950 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF9231_0760 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HMPREF9231_0699 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HMPREF9231_0710 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HMPREF9231_0757 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:gvh00600]
D HMPREF9231_1385 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9231_0063 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:gvh00230]
D HMPREF9231_1168 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9231_0708 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF9231_0378 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF9231_0693 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF9231_0691 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HMPREF9231_0696 putative phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D HMPREF9231_0694 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HMPREF9231_0692 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HMPREF9231_0686 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HMPREF9231_0685 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HMPREF9231_0695 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HMPREF9231_0908 putative adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF9231_0718 putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF9231_0716 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF9231_1217 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HMPREF9231_0391 Inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D HMPREF9231_1114 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HMPREF9231_0628 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF9231_0768 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF9231_1158 Ham1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HMPREF9231_0433 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HMPREF9231_0973 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF9231_0804 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HMPREF9231_0189 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF9231_0188 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF9231_1131 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF9231_0660 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D HMPREF9231_0928 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF9231_0843 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HMPREF9231_0426 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D HMPREF9231_0300 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D HMPREF9231_1337 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF9231_0258 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:gvh00240]
D HMPREF9231_0806 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF9231_0807 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF9231_0816 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF9231_0815 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HMPREF9231_0812 dihydroorotate oxidase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HMPREF9231_0813 oxidoreductase NAD-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D HMPREF9231_1161 putative dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D HMPREF9231_0811 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HMPREF9231_0805 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HMPREF9231_0814 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HMPREF9231_0762 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HMPREF9231_1239 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HMPREF9231_0452 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HMPREF9231_0391 Inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D HMPREF9231_1368 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF9231_1131 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF9231_0072 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D HMPREF9231_0189 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF9231_0188 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF9231_1283 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HMPREF9231_0929 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF9231_1008 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:gvh00250]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9231_0108 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9231_0773 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9231_0963 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF9231_0962 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF9231_1337 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF9231_0908 putative adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF9231_0816 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF9231_1033 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_1121 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_0806 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF9231_0807 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF9231_0647 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF9231_0693 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:gvh00260]
D HMPREF9231_1322 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF9231_1241 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF9231_1240 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HMPREF9231_1047 phosphotransferase enzyme family K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D HMPREF9231_0704 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF9231_1017 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9231_0776 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HMPREF9231_1100 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:gvh00270]
D HMPREF9231_0552 putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF9231_0553 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HMPREF9231_0819 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HMPREF9231_0802 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HMPREF9231_1204 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HMPREF9231_1176 putative MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HMPREF9231_1217 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HMPREF9231_1365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9231_1173 ahcY; S-adenosyl-L-homocysteine hydrolase, NAD binding domain protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HMPREF9231_0657 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF9231_1322 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF9231_1241 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF9231_0841 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9231_1027 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0845 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_1100 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:gvh00280]
D HMPREF9231_0841 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF9231_0304 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HMPREF9231_0303 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HMPREF9231_0430 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:gvh00290]
D HMPREF9231_0674 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF9231_0841 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF9231_0108 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9231_0773 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00300 Lysine biosynthesis [PATH:gvh00300]
D HMPREF9231_1241 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF9231_1322 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF9231_0059 dihydrodipicolinate synthetase family K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF9231_1087 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:gvh00220]
D HMPREF9231_0963 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF9231_0962 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF9231_1033 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_1121 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9231_0108 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9231_0773 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:gvh00330]
D HMPREF9231_0861 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HMPREF9231_1231 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF9231_0705 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
D HMPREF9231_0222 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00350 Tyrosine metabolism [PATH:gvh00350]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9231_0222 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF9231_0240 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9231_0731 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:gvh00360]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9231_0222 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gvh00400]
D HMPREF9231_1207 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF9231_0450 aroB; 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D HMPREF9231_0451 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HMPREF9231_0977 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HMPREF9231_0449 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HMPREF9231_1339 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D HMPREF9231_0415 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D HMPREF9231_0416 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9231_0222 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:gvh00430]
D HMPREF9231_0975 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9231_0976 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:gvh00450]
D HMPREF9231_0819 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HMPREF9231_1026 sufS; cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HMPREF9231_1402 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HMPREF9231_1273 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
C 00470 D-Amino acid metabolism [PATH:gvh00470]
D HMPREF9231_0659 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF9231_1243 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF9231_1065 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF9231_1085 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:gvh00480]
D HMPREF9231_0348 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF9231_0192 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF9231_1258 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF9231_0195 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:gvh00511]
D HMPREF9231_0063 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF9231_1385 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9231_0275 Beta galactosidase small chain K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D HMPREF9231_0276 hypothetical protein K12112 ebgC; evolved beta-galactosidase subunit beta
D HMPREF9231_0663 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF9231_1386 hypothetical protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:gvh00542]
D HMPREF9231_0627 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:gvh00541]
D HMPREF9231_0746 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9231_0364 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF9231_1143 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HMPREF9231_1157 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF9231_1155 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF9231_1156 putative dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D HMPREF9231_0599 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:gvh00550]
D HMPREF9231_1225 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF9231_0227 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF9231_1082 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF9231_1085 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF9231_1243 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF9231_1087 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF9231_1046 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF9231_1086 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF9231_1083 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF9231_1089 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF9231_0015 pbpA; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D HMPREF9231_1116 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF9231_1374 Mur ligase middle domain protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF9231_1373 CobB/CobQ-like protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF9231_1109 FemAB family protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
C 00552 Teichoic acid biosynthesis [PATH:gvh00552]
D HMPREF9231_0627 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF9231_1010 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:gvh00543]
D HMPREF9231_0627 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF9231_0552 putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:gvh00730]
D HMPREF9231_0926 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D HMPREF9231_1298 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D HMPREF9231_1296 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D HMPREF9231_0090 thiE; thiamine-phosphate diphosphorylase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF9231_0999 thiE; thiamine-phosphate diphosphorylase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF9231_0371 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D HMPREF9231_0258 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF9231_0569 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:gvh00740]
D HMPREF9231_1208 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HMPREF9231_0112 nitroreductase family protein K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D HMPREF9231_0090 thiE; thiamine-phosphate diphosphorylase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF9231_0999 thiE; thiamine-phosphate diphosphorylase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:gvh00750]
D HMPREF9231_1218 oxidoreductase, aldo/keto reductase family protein K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D HMPREF9231_0704 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF9231_0652 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D HMPREF9231_0651 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:gvh00760]
D HMPREF9231_0401 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HMPREF9231_0707 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HMPREF9231_0920 nadE; NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D HMPREF9231_0700 competence/damage-inducible domain protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D HMPREF9231_0083 transcriptional regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HMPREF9231_0957 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:gvh00770]
D HMPREF9231_0674 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF9231_0081 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HMPREF9231_0649 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D HMPREF9231_0402 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HMPREF9231_0594 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HMPREF9231_0309 phosphopantetheine--protein transferase domain protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HMPREF9231_0841 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:gvh00780]
D HMPREF9231_1192 putative biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:gvh00790]
D HMPREF9231_1112 hypothetical protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D HMPREF9231_1007 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF9231_0353 folC; bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:gvh00670]
D HMPREF9231_1007 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF9231_1279 putative formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF9231_0589 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF9231_0718 putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF9231_0777 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF9231_1008 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HMPREF9231_0818 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D HMPREF9231_0209 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:gvh00130]
D HMPREF9231_0993 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D HMPREF9231_1174 amidohydrolase family protein K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:gvh00900]
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HMPREF9231_0430 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D HMPREF9231_0431 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D HMPREF9231_0383 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D HMPREF9231_0384 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D HMPREF9231_0386 fni; isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D HMPREF9231_0947 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF9231_1046 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HMPREF9231_0780 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:gvh00523]
D HMPREF9231_1157 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF9231_1155 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF9231_1156 putative dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D HMPREF9231_1155 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:gvh00332]
D HMPREF9231_1231 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF9231_0705 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:gvh00261]
D HMPREF9231_1322 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF9231_0059 dihydrodipicolinate synthetase family K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:gvh00521]
D HMPREF9231_0053 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0673 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_1168 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9231_1287 putative inositol 1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D HMPREF9231_0775 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF9231_1157 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF9231_1155 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF9231_1156 putative dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HMPREF9231_0053 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9231_0673 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:gvh00525]
D HMPREF9231_1157 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF9231_1155 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:gvh00401]
D HMPREF9231_0416 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9231_0222 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites
D HMPREF9231_0802 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:gvh00625]
D HMPREF9231_0731 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF9231_0240 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9231_0881 HAD hydrolase, family IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D HMPREF9231_0881 HAD hydrolase, family IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:gvh00626]
D HMPREF9231_0731 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF9231_0240 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:gvh03020]
D HMPREF9231_0330 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF9231_0331 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF9231_0263 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF9231_0803 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:gvh03010]
D HMPREF9231_0590 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF9231_0764 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF9231_0246 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF9231_0438 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF9231_0254 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF9231_0379 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF9231_1079 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF9231_0251 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF9231_0239 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF9231_0262 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF9231_1080 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF9231_0261 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF9231_1220 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF9231_0396 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF9231_0381 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF9231_0678 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF9231_1195 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF9231_0244 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF9231_0242 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF9231_0243 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF9231_0250 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF9231_0252 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF9231_1197 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF9231_0382 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF9231_1198 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF9231_1196 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF9231_0238 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF9231_0256 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF9231_0247 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF9231_0264 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF9231_0253 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF9231_0319 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF9231_0374 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF9231_1234 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF9231_0245 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF9231_0249 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF9231_0621 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D HMPREF9231_1233 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF9231_0387 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF9231_0248 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF9231_0255 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF9231_0623 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF9231_0405 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF9231_0226 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF9231_1409 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF9231_0373 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF9231_0260 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF9231_0086 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9231_1255 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9231_0087 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9231_1254 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9231_0088 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9231_1253 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:gvh00970]
D HMPREF9231_0037 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9231_0608 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9231_1223 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9231_0598 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9231_0911 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9231_1000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9231_1071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9231_0836 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF9231_1127 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF9231_0885 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF9231_0211 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF9231_0709 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF9231_1124 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF9231_0210 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF9231_0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9231_0886 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9231_0732 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9231_0310 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9231_0697 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF9231_0036 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF9231_0064 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_0312 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_0597 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_0842 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_0989 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_1380 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF9231_1075 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF9231_0225 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9231_0351 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9231_0132 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9231_1126 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF9231_0982 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9231_1020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9231_0325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9231_0232 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9231_0267 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9231_0428 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9231_0224 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9231_0313 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9231_1393 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9231_1229 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF9231_0223 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF9231_0883 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9231_0884 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9231_1053 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9231_0209 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF9231_1346 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF9231_1345 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF9231_1347 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF9231_0443 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF9231_0741 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF9231_1043 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF9231_0875 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF9231_1142 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF9231_0399 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF9231_1273 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF9231_0777 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF9231_0202 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF9231_0829 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF9231_1070 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF9231_1018 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF9231_0203 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF9231_0633 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF9231_0740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF9231_0966 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF9231_0965 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF9231_0961 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF9231_0027 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:gvh03060]
D HMPREF9231_0257 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF9231_1228 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF9231_0794 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF9231_0715 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF9231_1407 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF9231_0952 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF9231_0398 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF9231_1286 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF9231_1378 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF9231_0320 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF9231_1037 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:gvh04122]
D HMPREF9231_1295 ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D HMPREF9231_1297 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:gvh03018]
D HMPREF9231_1235 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF9231_0846 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9231_1219 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF9231_1341 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HMPREF9231_0347 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF9231_1293 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9231_0898 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9231_1363 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HMPREF9231_1397 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:gvh03030]
D HMPREF9231_0355 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9231_1035 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9231_1326 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9231_1282 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9231_0826 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9231_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9231_1375 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF9231_0661 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF9231_0634 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_0380 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_1169 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HMPREF9231_0321 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF9231_0737 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:gvh03410]
D HMPREF9231_0200 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF9231_0900 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF9231_0457 putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF9231_0737 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:gvh03420]
D HMPREF9231_0851 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF9231_0770 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF9231_0595 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF9231_0769 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF9231_0434 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_0339 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_1060 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_0737 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:gvh03430]
D HMPREF9231_0434 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_0339 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_1060 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_1073 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF9231_1072 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF9231_0634 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_0380 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_1035 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9231_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9231_1326 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9231_0826 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9231_1282 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9231_0355 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9231_0737 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:gvh03440]
D HMPREF9231_0634 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_0380 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_1051 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF9231_1325 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF9231_0702 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF9231_0713 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF9231_0714 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF9231_0712 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HMPREF9231_0388 putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9231_0782 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9231_1035 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9231_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9231_1326 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9231_0826 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9231_1282 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9231_0355 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:gvh03250]
D HMPREF9231_0927 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:gvh02010]
D HMPREF9231_0849 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D HMPREF9231_0848 ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D HMPREF9231_0850 ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D HMPREF9231_1390 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9231_1308 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF9231_1309 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF9231_1310 ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF9231_0299 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF9231_1105 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF9231_0296 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9231_1106 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9231_0297 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9231_1107 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9231_0360 ABC transporter, solute-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D HMPREF9231_0361 ABC transporter, permease protein K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D HMPREF9231_0362 ABC transporter, permease protein K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D HMPREF9231_1187 hypothetical protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D HMPREF9231_1185 branched-chain amino acid ABC transporter, permease protein K10547 gguB; putative multiple sugar transport system permease protein
D HMPREF9231_1186 ABC transporter, ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9231_0078 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF9231_0077 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF9231_0076 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF9231_0079 RbsD/FucU transport family protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D HMPREF9231_1203 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF9231_1202 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF9231_1201 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF9231_1200 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF9231_0743 ABC transporter, substrate-binding protein, family 3 K10005 gluB; glutamate transport system substrate-binding protein
D HMPREF9231_0744 ABC transporter, permease protein K10006 gluC; glutamate transport system permease protein
D HMPREF9231_0745 ABC transporter, permease protein K10007 gluD; glutamate transport system permease protein
D HMPREF9231_0742 ABC transporter, ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9231_0922 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF9231_0924 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF9231_0923 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF9231_0453 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9231_0454 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF9231_0455 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF9231_0456 putative phosphonate C-P lyase system protein PhnK K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF9231_1268 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D HMPREF9231_1271 ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein
D HMPREF9231_1270 ABC transporter, permease protein K13891 gsiD; glutathione transport system permease protein
D HMPREF9231_1269 putative phosphonate C-P lyase system protein PhnK K13892 gsiA; glutathione transport system ATP-binding protein
D HMPREF9231_0302 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D HMPREF9231_0978 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0558 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0666 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0994 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0541 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0665 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0542 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0556 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0543 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0664 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0159 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D HMPREF9231_0160 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D HMPREF9231_0158 ABC transporter, ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D HMPREF9231_0640 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF9231_0639 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF9231_1266 ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9231_1265 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9231_1129 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9231_1128 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9231_0787 ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:gvh02060]
D HMPREF9231_0359 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF9231_0676 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
C 03070 Bacterial secretion system [PATH:gvh03070]
D HMPREF9231_1228 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF9231_0794 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF9231_0257 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF9231_0715 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF9231_1407 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF9231_0952 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF9231_1378 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF9231_0398 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:gvh02020]
D HMPREF9231_1015 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9231_1203 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF9231_0067 trypsin K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D HMPREF9231_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF9231_0688 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D HMPREF9231_1332 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF9231_1331 hypothetical protein K12510 tadB; tight adherence protein B
D HMPREF9231_1033 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_1121 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HMPREF9231_1163 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9231_0539 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9231_1006 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:gvh02024]
D HMPREF9231_0657 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF9231_1145 glycosyltransferase, group 2 family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D HMPREF9231_1207 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF9231_0308 LPXTG-motif cell wall anchor domain protein K20276 bapA; large repetitive protein
D HMPREF9231_0620 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0834 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0766 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_1163 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9231_0539 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9231_0293 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D HMPREF9231_1348 Thiol-activated cytolysin K11031 slo; thiol-activated cytolysin
D HMPREF9231_0453 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9231_0454 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF9231_0455 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF9231_0456 putative phosphonate C-P lyase system protein PhnK K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF9231_0653 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9231_1067 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9231_0055 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9231_0201 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9231_0056 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9231_0654 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9231_1068 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9231_0655 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF9231_1069 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF9231_0057 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9231_0656 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9231_1066 putative phosphonate C-P lyase system protein PhnK K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9231_0058 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF9231_1407 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF9231_1228 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF9231_0794 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF9231_0257 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF9231_0715 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF9231_0952 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF9231_1378 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF9231_0398 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D HMPREF9231_0078 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D HMPREF9231_0945 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HMPREF9231_0846 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:gvh01501]
D HMPREF9231_0453 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9231_0454 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF9231_0455 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF9231_0456 putative phosphonate C-P lyase system protein PhnK K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF9231_1089 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:gvh01502]
D HMPREF9231_1243 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF9231_0659 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF9231_1087 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF9231_1086 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF9231_1083 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:gvh01503]
D HMPREF9231_0927 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF9231_0688 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:gvh01000]
C 01001 Protein kinases [BR:gvh01001]
D HMPREF9231_0948 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF9231_0016 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF9231_0017 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF9231_1224 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF9231_1015 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9231_0894 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D HMPREF9231_0573 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:gvh01009]
D HMPREF9231_1173 ahcY; S-adenosyl-L-homocysteine hydrolase, NAD binding domain protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HMPREF9231_0013 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D HMPREF9231_0776 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:gvh01002]
D HMPREF9231_1037 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HMPREF9231_0447 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HMPREF9231_1214 peptidase C1-like family K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF9231_1272 peptidase C1-like family K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF9231_1216 putative pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D HMPREF9231_0973 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF9231_0641 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9231_1012 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9231_1013 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9231_0693 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF9231_0647 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF9231_0424 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_0335 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_1054 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_0214 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_0018 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_1280 pepD; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF9231_1242 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF9231_0348 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF9231_0636 peptidase family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D HMPREF9231_0637 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HMPREF9231_0349 aminopeptidase P domain protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HMPREF9231_1113 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF9231_0040 peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HMPREF9231_0067 trypsin K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D HMPREF9231_1074 hypothetical protein K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF9231_1164 peptidase, S9A/B/C family, catalytic domain protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D HMPREF9231_1116 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF9231_0912 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF9231_0913 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF9231_0498 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF9231_1058 Lon protease (S16) C-terminal proteolytic domain protein K07177 K07177; Lon-like protease
D HMPREF9231_1097 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HMPREF9231_0320 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:gvh01003]
D HMPREF9231_1010 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF9231_1119 glycosyltransferase, group 2 family protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D HMPREF9231_0627 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF9231_0730 glycosyltransferase, group 2 family protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:gvh01005]
D HMPREF9231_1145 glycosyltransferase, group 2 family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D HMPREF9231_1150 glycosyltransferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D HMPREF9231_0627 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:gvh01011]
D HMPREF9231_1225 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF9231_0227 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF9231_1082 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF9231_1085 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF9231_1243 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF9231_1109 FemAB family protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D HMPREF9231_0659 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF9231_1065 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF9231_1086 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF9231_1083 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF9231_1089 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF9231_0015 pbpA; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D HMPREF9231_1116 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF9231_0641 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9231_1012 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9231_1013 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9231_0424 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_0335 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_1054 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_0214 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_0018 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9231_0445 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:gvh01004]
D HMPREF9231_0305 MaoC-like protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D HMPREF9231_0620 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0834 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0766 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0950 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:gvh01006]
D HMPREF9231_0947 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF9231_1046 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF9231_0969 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF9231_0993 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:gvh01007]
D HMPREF9231_0209 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF9231_1361 putative glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HMPREF9231_0961 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF9231_0027 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF9231_0399 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF9231_0203 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF9231_1273 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF9231_1070 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF9231_0202 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF9231_0829 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF9231_1018 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF9231_0741 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF9231_0740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF9231_1043 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF9231_1142 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF9231_0633 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF9231_0875 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF9231_0443 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF9231_0966 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF9231_0965 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF9231_1230 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9231_0108 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9231_0773 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9231_0222 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF9231_0841 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:gvh00194]
D HMPREF9231_0140 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF9231_0139 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF9231_0138 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF9231_0137 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF9231_0136 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF9231_0135 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF9231_0134 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF9231_0133 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:gvh03000]
D HMPREF9231_1365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9231_0735 LysR substrate binding domain protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D HMPREF9231_0869 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9231_0075 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9231_0291 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D HMPREF9231_1305 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D HMPREF9231_0677 frlR; HTH-type transcriptional regulator FrlR K03710 K03710; GntR family transcriptional regulator
D HMPREF9231_1340 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HMPREF9231_1290 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D HMPREF9231_0687 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HMPREF9231_1163 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9231_0539 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9231_0668 cyclic nucleotide-binding domain protein K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator
D HMPREF9231_1192 putative biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HMPREF9231_0366 DNA-binding helix-turn-helix protein K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D HMPREF9231_0790 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF9231_0526 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF9231_0574 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D HMPREF9231_0234 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HMPREF9231_1403 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF9231_0587 CarD-like protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D HMPREF9231_0964 arginine repressor, C-terminal domain protein K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF9231_0779 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HMPREF9231_0569 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HMPREF9231_0153 putative sugar-binding domain protein K05346 deoR; deoxyribonucleoside regulator
D HMPREF9231_1094 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D HMPREF9231_1092 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:gvh03021]
D HMPREF9231_0263 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF9231_0330 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF9231_0331 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF9231_0803 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF9231_0945 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HMPREF9231_1212 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF9231_0808 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF9231_1227 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF9231_1098 prokaryotic transcription elongation factor, GreA/GreB domain protein K03624 greA; transcription elongation factor GreA
D HMPREF9231_1341 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:gvh03019]
D HMPREF9231_1235 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF9231_0406 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF9231_0347 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF9231_0631 exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HMPREF9231_0846 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9231_1219 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF9231_1341 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HMPREF9231_1293 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9231_0898 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9231_1363 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HMPREF9231_1397 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D HMPREF9231_0798 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D HMPREF9231_0749 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D HMPREF9231_1030 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:gvh03011]
D HMPREF9231_0590 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF9231_0764 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF9231_0246 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF9231_0438 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF9231_0254 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF9231_0379 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF9231_1079 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF9231_0251 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF9231_0239 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF9231_0262 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF9231_1080 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF9231_0261 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF9231_1220 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF9231_0396 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF9231_0381 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF9231_0678 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF9231_1195 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF9231_0244 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF9231_0242 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF9231_0243 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF9231_0250 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF9231_0252 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF9231_0382 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF9231_1198 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF9231_1196 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF9231_1197 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF9231_0238 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF9231_0256 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF9231_0247 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF9231_0264 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF9231_0253 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF9231_0319 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF9231_0374 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF9231_1234 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF9231_0245 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF9231_0249 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF9231_1233 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF9231_0387 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF9231_0248 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF9231_0255 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF9231_0623 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF9231_0405 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF9231_0226 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF9231_1409 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF9231_0373 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF9231_0260 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF9231_0621 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D HMPREF9231_0088 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9231_1253 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9231_0086 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9231_1255 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9231_0087 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9231_1254 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:gvh03009]
D HMPREF9231_0406 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF9231_0631 exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HMPREF9231_0617 era; ribosome biogenesis GTPase Era K03595 era; GTPase
D HMPREF9231_1232 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D HMPREF9231_1212 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF9231_0808 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF9231_1227 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF9231_1395 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HMPREF9231_1029 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HMPREF9231_0392 putative RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HMPREF9231_0612 RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HMPREF9231_1405 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF9231_1091 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HMPREF9231_1276 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HMPREF9231_0958 rrmJ; ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HMPREF9231_0070 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HMPREF9231_0721 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HMPREF9231_1036 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF9231_0823 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HMPREF9231_0394 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D HMPREF9231_1235 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF9231_0444 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HMPREF9231_0722 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D HMPREF9231_1028 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D HMPREF9231_0626 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF9231_0928 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF9231_1210 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D HMPREF9231_0600 iojap-like protein K09710 ybeB; ribosome-associated protein
D HMPREF9231_0615 ybeY; translation metalloprotein YbeY K07042 ybeY; probable rRNA maturation factor
D HMPREF9231_0726 putative RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein
D HMPREF9231_0860 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D HMPREF9231_0404 putative ACR, COG1399 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:gvh03016]
D HMPREF9231_0209 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF9231_0633 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF9231_1070 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF9231_0829 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF9231_1273 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF9231_0203 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF9231_1018 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF9231_0741 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF9231_0443 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF9231_1043 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF9231_0875 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF9231_1142 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF9231_0399 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF9231_0202 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF9231_0740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF9231_0966 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF9231_0965 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF9231_0961 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF9231_0027 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF9231_0613 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF9231_0821 methyltransferase domain protein K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D HMPREF9231_1125 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HMPREF9231_0266 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HMPREF9231_1209 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HMPREF9231_0626 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF9231_0969 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF9231_1408 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HMPREF9231_0954 rnpB; Bacterial RNase P class A K01978 rnpB; M1 RNA
D HMPREF9231_1159 rph; tRNA nucleotidyltransferase K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HMPREF9231_0916 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HMPREF9231_1361 putative glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HMPREF9231_0369 YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HMPREF9231_0074 cytidine and deoxycytidylate deaminase zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HMPREF9231_0393 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HMPREF9231_0328 putative RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HMPREF9231_0967 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D HMPREF9231_0066 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HMPREF9231_1115 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HMPREF9231_0824 yeaZ; universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HMPREF9231_0822 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HMPREF9231_0825 hydrolase, P-loop family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HMPREF9231_1219 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:gvh03012]
D HMPREF9231_1211 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF9231_0372 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF9231_0763 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF9231_1077 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF9231_1078 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF9231_0624 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HMPREF9231_0761 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HMPREF9231_0625 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HMPREF9231_0852 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HMPREF9231_0259 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HMPREF9231_0809 efp; translation elongation factor P K02356 efp; elongation factor P
D HMPREF9231_0638 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:gvh03110]
D HMPREF9231_1358 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HMPREF9231_0891 ATPase family associated with various cellular activities (AAA) K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HMPREF9231_1293 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9231_0898 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9231_0778 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF9231_1291 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D HMPREF9231_1292 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF9231_0221 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF9231_1113 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF9231_0133 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF9231_1074 hypothetical protein K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF9231_0927 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF9231_1141 trxA; thioredoxin K03671 TXN; thioredoxin
D HMPREF9231_1313 hypothetical protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:gvh04131]
D HMPREF9231_0663 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF9231_0370 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF9231_1017 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9231_0596 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:gvh04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:gvh03032]
D HMPREF9231_1169 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HMPREF9231_1365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9231_0910 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF9231_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF9231_1375 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF9231_0661 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF9231_0634 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_0380 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_1035 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9231_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9231_0826 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9231_1282 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9231_0355 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9231_1326 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9231_0321 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF9231_0737 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF9231_0933 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF9231_0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF9231_0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF9231_0944 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF9231_1284 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:gvh03036]
D HMPREF9231_1365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9231_0406 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF9231_0910 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF9231_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF9231_0034 ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D HMPREF9231_1340 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HMPREF9231_0639 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF9231_1089 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF9231_0698 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF9231_0575 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF9231_1081 POTRA domain protein, FtsQ-type K03589 ftsQ; cell division protein FtsQ
D HMPREF9231_1084 putative cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HMPREF9231_0640 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF9231_1041 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF9231_1040 hypothetical protein K09772 sepF; cell division inhibitor SepF
D HMPREF9231_1404 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF9231_0418 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF9231_1403 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF9231_1405 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF9231_0407 putative site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D HMPREF9231_0131 site-specific recombinase, phage integrase family K03733 xerC; integrase/recombinase XerC
D HMPREF9231_0417 phage integrase SAM-like domain protein K04763 xerD; integrase/recombinase XerD
D HMPREF9231_0738 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HMPREF9231_0047 DNA binding domain, excisionase family K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HMPREF9231_0797 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:gvh03400]
D HMPREF9231_0900 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF9231_0200 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF9231_0929 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF9231_0457 putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF9231_0737 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF9231_0770 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF9231_0595 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF9231_0769 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF9231_0434 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_0339 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_1060 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9231_0330 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF9231_0331 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF9231_0263 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF9231_0803 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF9231_0851 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF9231_1073 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF9231_1072 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF9231_1035 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9231_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9231_0826 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9231_1282 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9231_0355 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9231_1326 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9231_0634 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_0380 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_0702 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF9231_0713 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF9231_0714 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF9231_0712 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HMPREF9231_1172 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HMPREF9231_0388 putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9231_0782 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9231_1051 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF9231_1325 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF9231_0956 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HMPREF9231_0933 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF9231_0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF9231_0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF9231_0944 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF9231_1284 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HMPREF9231_0910 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF9231_0230 ImpB/MucB/SamB family protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HMPREF9231_1097 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HMPREF9231_0703 recX; regulatory protein RecX K03565 recX; regulatory protein
D HMPREF9231_1366 hydrolase, NUDIX family K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D HMPREF9231_0189 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF9231_0188 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:gvh03029]
D HMPREF9231_1211 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF9231_0372 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF9231_0763 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF9231_1077 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF9231_1078 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF9231_0617 era; ribosome biogenesis GTPase Era K03595 era; GTPase
D HMPREF9231_0961 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF9231_0829 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF9231_0741 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF9231_1043 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF9231_0203 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF9231_1346 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF9231_1345 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF9231_1347 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF9231_0634 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_0380 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9231_1293 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9231_1292 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF9231_0898 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9231_0221 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF9231_0778 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF9231_1291 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D HMPREF9231_0738 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HMPREF9231_1407 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:gvh02000]
D HMPREF9231_1266 ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9231_1265 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9231_1129 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9231_1128 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9231_0555 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF9231_0322 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF9231_0787 ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D HMPREF9231_1160 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HMPREF9231_0849 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D HMPREF9231_0848 ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D HMPREF9231_0850 ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D HMPREF9231_0853 NMT1/THI5-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D HMPREF9231_1048 NMT1/THI5-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D HMPREF9231_0317 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D HMPREF9231_0318 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D HMPREF9231_1390 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9231_0115 ABC transporter, solute-binding protein K25086 musE; maltose transport system substrate-binding protein
D HMPREF9231_0117 ABC transporter, permease protein K25087 musF; maltose transport system permease protein
D HMPREF9231_0118 ABC transporter, permease protein K25088 musG; maltose transport system permease protein
D HMPREF9231_1308 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF9231_1309 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF9231_1310 ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF9231_0299 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF9231_1105 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF9231_0296 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9231_1106 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9231_0297 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9231_1107 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9231_0360 ABC transporter, solute-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D HMPREF9231_0361 ABC transporter, permease protein K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D HMPREF9231_0362 ABC transporter, permease protein K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D HMPREF9231_1187 hypothetical protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D HMPREF9231_1185 branched-chain amino acid ABC transporter, permease protein K10547 gguB; putative multiple sugar transport system permease protein
D HMPREF9231_1186 ABC transporter, ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9231_0078 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF9231_0077 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF9231_0076 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF9231_0103 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9231_0648 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9231_0269 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9231_1381 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9231_1304 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9231_1382 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9231_0104 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9231_0270 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9231_1303 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9231_1383 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9231_0105 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9231_0271 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9231_1302 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9231_0279 sugar-binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D HMPREF9231_0281 branched-chain amino acid ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D HMPREF9231_0282 branched-chain amino acid ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D HMPREF9231_0280 ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9231_1189 ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9231_1203 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF9231_1202 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF9231_1201 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF9231_1200 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF9231_0743 ABC transporter, substrate-binding protein, family 3 K10005 gluB; glutamate transport system substrate-binding protein
D HMPREF9231_0744 ABC transporter, permease protein K10006 gluC; glutamate transport system permease protein
D HMPREF9231_0745 ABC transporter, permease protein K10007 gluD; glutamate transport system permease protein
D HMPREF9231_0742 ABC transporter, ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9231_0922 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF9231_0924 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF9231_0923 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF9231_0644 ABC transporter, substrate-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF9231_1177 ABC transporter, substrate-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF9231_0645 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF9231_1178 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF9231_1179 ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9231_0646 ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9231_0453 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9231_0454 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF9231_0455 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF9231_0456 putative phosphonate C-P lyase system protein PhnK K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF9231_1268 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D HMPREF9231_1271 ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein
D HMPREF9231_1270 ABC transporter, permease protein K13891 gsiD; glutathione transport system permease protein
D HMPREF9231_1269 putative phosphonate C-P lyase system protein PhnK K13892 gsiA; glutathione transport system ATP-binding protein
D HMPREF9231_0653 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9231_1067 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9231_0055 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9231_0201 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9231_0056 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9231_0654 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9231_1068 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9231_0655 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF9231_1069 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF9231_0057 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9231_0656 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9231_1066 putative phosphonate C-P lyase system protein PhnK K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9231_0058 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF9231_1246 anchored repeat-type ABC transporter, permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein
D HMPREF9231_1247 anchored repeat-type ABC transporter, ATP-binding subunit K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D HMPREF9231_0302 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D HMPREF9231_0559 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D HMPREF9231_0667 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D HMPREF9231_0540 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D HMPREF9231_0978 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0558 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0666 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0994 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0541 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9231_0665 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0542 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0556 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0543 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0664 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0995 cobalt ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0979 cobalt ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0727 cobalt ABC transporter, ATP-binding protein K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_1001 cobalt transport protein K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D HMPREF9231_0352 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D HMPREF9231_1049 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D HMPREF9231_0980 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D HMPREF9231_0588 ABC transporter, substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D HMPREF9231_0876 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D HMPREF9231_0877 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D HMPREF9231_0878 ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D HMPREF9231_0158 ABC transporter, ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D HMPREF9231_0159 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D HMPREF9231_0160 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D HMPREF9231_0640 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF9231_0639 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF9231_1117 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF9231_0547 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF9231_0548 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF9231_1152 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF9231_1349 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF9231_1356 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9231_0042 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9231_1118 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9231_0463 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9231_0546 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9231_1350 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9231_1154 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9231_1319 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9231_0169 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9231_0170 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9231_0436 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9231_0682 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9231_0683 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9231_0866 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9231_1320 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9231_0171 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9231_0437 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9231_0684 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9231_0867 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9231_0412 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HMPREF9231_1376 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF9231_0872 transporter, major facilitator family protein K02429 fucP; MFS transporter, FHS family, L-fucose permease
D HMPREF9231_0151 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D HMPREF9231_0669 transporter, major facilitator family protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D HMPREF9231_1031 transporter, major facilitator family protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D HMPREF9231_0359 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF9231_0676 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF9231_0720 transporter, major intrinsic protein (MIP) family protein K06188 aqpZ; aquaporin Z
D HMPREF9231_1362 MIP family channel protein K02440 glpF; glycerol uptake facilitator
D HMPREF9231_1377 ammonium transporter K03320 amt; ammonium transporter, Amt family
D HMPREF9231_0905 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D HMPREF9231_0009 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D HMPREF9231_1335 CrcB-like protein K06199 crcB; fluoride exporter
D HMPREF9231_1336 CrcB-like protein K06199 crcB; fluoride exporter
D HMPREF9231_0033 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF9231_0616 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF9231_0838 amino acid permease K11733 lysP; lysine-specific permease
D HMPREF9231_0968 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D HMPREF9231_0231 putative membrane protein K11939 rhtA; inner membrane transporter RhtA
D HMPREF9231_0293 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D HMPREF9231_1259 transporter, gluconate:H+ symporter family K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HMPREF9231_0566 putative 2-keto-3-deoxygluconate transporter K02526 kdgT; 2-keto-3-deoxygluconate permease
D HMPREF9231_0550 transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein K07862 sstT; serine/threonine transporter
D HMPREF9231_0609 putative Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D HMPREF9231_0109 transporter, CPA2 family K24163 nhaK; monovalent cation/hydrogen antiporter
D HMPREF9231_1199 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HMPREF9231_0914 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF9231_1334 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF9231_1236 transporter, auxin efflux carrier (AEC) family protein K13936 mdcF; malonate transporter and related proteins
D HMPREF9231_1263 potassium transporter K03549 kup; KUP system potassium uptake protein
D HMPREF9231_0728 hypothetical protein K23675 fmnP; riboflavin transporter
D HMPREF9231_1084 putative cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HMPREF9231_0166 iron permease FTR1 family K07243 FTR; high-affinity iron transporter
D HMPREF9231_0167 hypothetical protein K07230 p19; periplasmic iron binding protein
D HMPREF9231_0286 hypothetical protein K03646 tolA; colicin import membrane protein
D HMPREF9231_0119 hypothetical protein K25089 musI; membrane protein
C 02044 Secretion system [BR:gvh02044]
D HMPREF9231_0447 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HMPREF9231_1332 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF9231_1331 hypothetical protein K12510 tadB; tight adherence protein B
D HMPREF9231_1039 YGGT family protein K02221 yggT; YggT family protein
D HMPREF9231_0828 hypothetical protein K02237 comEA; competence protein ComEA
D HMPREF9231_0827 ComEC/Rec2-like protein K02238 comEC; competence protein ComEC
D HMPREF9231_0952 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF9231_1228 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF9231_0794 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF9231_0257 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF9231_0398 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF9231_1378 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF9231_0715 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF9231_1407 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:gvh02042]
D HMPREF9231_1348 Thiol-activated cytolysin K11031 slo; thiol-activated cytolysin
D HMPREF9231_0033 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF9231_0616 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:gvh02022]
D HMPREF9231_1015 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9231_0894 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D HMPREF9231_0895 response regulator receiver domain protein K02483 K02483; two-component system, OmpR family, response regulator
D HMPREF9231_0602 LytTr DNA-binding domain protein K02477 K02477; two-component system, LytTR family, response regulator
D HMPREF9231_0573 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D HMPREF9231_0992 response regulator receiver domain protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:gvh02035]
D HMPREF9231_0447 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HMPREF9231_1332 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:gvh04812]
D HMPREF9231_1041 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF9231_1404 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF9231_0418 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF9231_1403 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:gvh04147]
D HMPREF9231_0846 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9231_0370 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF9231_0796 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF9231_0596 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF9231_0927 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF9231_0898 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9231_1293 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9231_0314 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9231_0628 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF9231_0768 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF9231_1077 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF9231_0613 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF9231_1027 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0845 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9231_0620 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0834 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0766 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9231_0432 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HMPREF9231_1173 ahcY; S-adenosyl-L-homocysteine hydrolase, NAD binding domain protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HMPREF9231_0258 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF9231_0716 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF9231_0962 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF9231_0963 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF9231_1386 hypothetical protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF9231_0357 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF9231_0586 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF9231_1033 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_1121 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9231_0718 putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF9231_0195 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF9231_0795 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF9231_1017 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:gvh02048]
D HMPREF9231_0165 hsdR; type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HMPREF9231_0163 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HMPREF9231_0162 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HMPREF9231_1365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9231_0488 HNH endonuclease domain protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D HMPREF9231_0409 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9231_0186 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9231_0536 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9231_0520 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9231_0530 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9231_0408 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D HMPREF9231_0092 hypothetical protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D HMPREF9231_0529 toxin-antitoxin system, toxin component, RelE family K19092 parE1_3_4; toxin ParE1/3/4
D HMPREF9231_0784 prevent-host-death family protein K19165 phd; antitoxin Phd
D HMPREF9231_0146 toxin-antitoxin system, toxin component, RelE family K07334 higB-1; toxin HigB-1
D HMPREF9231_0145 higA; addiction module antidote protein HigA K21498 higA-1; antitoxin HigA-1
D HMPREF9231_0367 zeta toxin K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
D HMPREF9231_0366 DNA-binding helix-turn-helix protein K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D HMPREF9231_1041 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF9231_0209 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:gvh04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:gvh01504]
D HMPREF9231_1031 transporter, major facilitator family protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D HMPREF9231_0787 ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D HMPREF9231_0688 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:gvh03100]
D HMPREF9231_0037 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9231_0608 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9231_1223 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9231_0598 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9231_0911 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9231_1000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9231_1071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9231_0836 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF9231_1127 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF9231_0885 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF9231_0211 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF9231_0709 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF9231_1124 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF9231_0210 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF9231_0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9231_0886 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9231_0732 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9231_0310 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9231_0697 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF9231_0036 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF9231_0064 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_0312 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_0597 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_0842 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_0989 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9231_1380 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF9231_1075 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF9231_0225 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9231_0351 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9231_0132 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9231_1126 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF9231_0982 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9231_1020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9231_0325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9231_0232 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9231_0267 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9231_0428 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9231_0224 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9231_0313 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9231_1393 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9231_1229 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF9231_0223 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF9231_0883 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9231_0884 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9231_1053 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9231_0086 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9231_1255 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9231_0087 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9231_1254 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9231_0088 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9231_1253 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9231_1286 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF9231_0954 rnpB; Bacterial RNase P class A K01978 rnpB; M1 RNA
D HMPREF9231_0971 HMPREF9231_0971 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HMPREF9231_1180 oxidoreductase, aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D HMPREF9231_0734 ahpF; alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D HMPREF9231_0733 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D HMPREF9231_0039 pyridine nucleotide-disulfide oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HMPREF9231_1379 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D HMPREF9231_1130 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HMPREF9231_0918 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HMPREF9231_0272 kojP; kojibiose phosphorylase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D HMPREF9231_0759 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HMPREF9231_0154 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HMPREF9231_0480 putative DNA-directed DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D HMPREF9231_0817 glnE; [glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D HMPREF9231_0601 phosphoglycerate mutase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D HMPREF9231_1063 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HMPREF9231_0820 phosphoglycerate mutase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D HMPREF9231_1264 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HMPREF9231_1317 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D HMPREF9231_1122 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF9231_0765 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF9231_0901 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HMPREF9231_0880 putative YjeF domain protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HMPREF9231_1388 RbsD/FucU transport family protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D HMPREF9231_0662 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D HMPREF9231_0071 putative calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HMPREF9231_1101 E1-E2 ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D HMPREF9231_1025 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D HMPREF9231_0190 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D HMPREF9231_1360 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HMPREF9231_1139 G5 domain protein K21688 rpfB; resuscitation-promoting factor RpfB
D HMPREF9231_0909 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D HMPREF9231_0073 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HMPREF9231_0893 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D HMPREF9231_0915 tig; trigger factor K03545 tig; trigger factor
D HMPREF9231_0642 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HMPREF9231_0191 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D HMPREF9231_0986 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D HMPREF9231_1353 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D HMPREF9231_0985 putative TIGR00252 family protein K07460 yraN; putative endonuclease
D HMPREF9231_0987 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D HMPREF9231_0482 phage/plasmid primase, P4 family domain protein K06919 K06919; putative DNA primase/helicase
D HMPREF9231_0122 hypothetical protein K07493 K07493; putative transposase
D HMPREF9231_0285 hypothetical protein K07493 K07493; putative transposase
D HMPREF9231_0429 hypothetical protein K07493 K07493; putative transposase
D HMPREF9231_1312 hypothetical protein K07493 K07493; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HMPREF9231_1318 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D HMPREF9231_0228 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HMPREF9231_0204 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D HMPREF9231_1406 R3H domain protein K06346 jag; spoIIIJ-associated protein
D HMPREF9231_0514 resolvase, N-terminal domain protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D HMPREF9231_0413 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D HMPREF9231_0375 ACT domain protein K07166 K07166; ACT domain-containing protein
D HMPREF9231_0614 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D HMPREF9231_0512 glycosyl hydrolase family 25 K07273 acm; lysozyme
C 99994 Others
D HMPREF9231_1016 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HMPREF9231_0410 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HMPREF9231_0411 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D HMPREF9231_0561 LemA family protein K03744 lemA; LemA protein
D HMPREF9231_1221 SNARE-like domain protein K03975 dedA; membrane-associated protein
D HMPREF9231_0568 YhgE/Pip domain protein K01421 yhgE; putative membrane protein
D HMPREF9231_0032 TIGR03943 family protein K08986 ycgQ; putative membrane protein
C 99997 Function unknown
D HMPREF9231_0427 hypothetical protein K06890 K06890; uncharacterized protein
D HMPREF9231_0185 hypothetical protein K06921 K06921; uncharacterized protein
D HMPREF9231_1262 hypothetical protein K06950 K06950; uncharacterized protein
D HMPREF9231_0395 hypothetical protein K06960 K06960; uncharacterized protein
D HMPREF9231_0604 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D HMPREF9231_0031 putative permease K07089 K07089; uncharacterized protein
D HMPREF9231_0786 hypothetical protein K07090 K07090; uncharacterized protein
D HMPREF9231_0537 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9231_0332 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9231_0048 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9231_0143 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9231_0855 hypothetical protein K09118 K09118; uncharacterized protein
D HMPREF9231_0376 hypothetical protein K09157 K09157; uncharacterized protein
D HMPREF9231_0890 hypothetical protein K09384 K09384; uncharacterized protein
D HMPREF9231_1175 cupin family protein K09705 K09705; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 27, 2024