+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Lentibacillus amyloliquefaciens

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D AOX59_01770 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C AOX59_05555 era; GTPase Era K03595 era; GTPase C AOX59_06000 GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C AOX59_00660 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor C AOX59_01940 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C AOX59_05135 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB C AOX59_12920 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D AOX59_07250 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D AOX59_13260 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D AOX59_01675 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AOX59_12895 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D AOX59_01385 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AOX59_05625 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AOX59_13760 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AOX59_01450 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D AOX59_13290 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D AOX59_05105 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D AOX59_12940 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D AOX59_14015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D AOX59_14535 23S rRNA (adenine(2503)-C2)-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D AOX59_05105 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D AOX59_10775 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D AOX59_04835 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D AOX59_01570 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AOX59_12370 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AOX59_08395 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C AOX59_11280 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C AOX59_13930 alanine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C AOX59_01815 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM C AOX59_05630 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C AOX59_01770 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C AOX59_05820 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C AOX59_12945 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C AOX59_11480 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C AOX59_05500 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C AOX59_05555 era; GTPase Era K03595 era; GTPase C AOX59_01690 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C AOX59_04715 engA; ribosome biogenesis GTPase Der K03977 engA; GTPase C AOX59_06000 GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] C AOX59_01835 ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A C AOX59_03185 GTPase HflX K03665 hflX; GTPase C AOX59_05735 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C AOX59_15645 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C AOX59_05900 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C AOX59_01965 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C AOX59_01935 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C AOX59_13710 RNA-binding protein K14761 rlbA; ribosome-associated protein C AOX59_05710 ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein C AOX59_05565 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor C AOX59_05725 RNA-binding protein K07574 yhbY; RNA-binding protein C AOX59_18245 Fis family transcriptional regulator K05808 hpf; ribosome hibernation promoting factor C AOX59_13810 GTP-binding protein K06942 ychF; ribosome-binding ATPase C AOX59_01410 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024