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  Transfer RNA Biogenesis - Monoraphidium neglectum

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AEukaryotic type B 5'processing factors C Ribonucrease P D MNEG_5450 Pentatricopeptide repeat-containing protein K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5] D MNEG_5451 Pentatricopeptide repeat-containing protein K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5] B 3'processing and CCA adding factors C 3'processing factors D MNEG_1725 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MNEG_5777 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MNEG_9978 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MNEG_7438 Nuclear ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MNEG_13461 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D MNEG_5816 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D MNEG_2776 Pentatricopeptide repeat-containing protein K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1 D MNEG_13204 Pentatricopeptide repeat-containing protein K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1 D MNEG_15081 Pentatricopeptide repeat-containing protein K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1 D MNEG_9642 Pentatricopeptide repeat-containing protein K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1 C CCA adding factors B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex D MNEG_5458 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D MNEG_7322 Protein archease-like protein K24956 ZBTB8OS; protein archease C Other tRNA splicing factors B tRNA transport factors C tRNA export factors D MNEG_12473 GTP-binding nuclear protein Ran-2 K07936 RAN; GTP-binding nuclear protein Ran D MNEG_8066 GTP-binding nuclear protein Ran-A1 K07936 RAN; GTP-binding nuclear protein Ran D MNEG_9085 Eukaryotic translation elongation factor 1alpha K03231 EEF1A; elongation factor 1-alpha D MNEG_5220 elongation factor EF-1 alpha subunit K03231 EEF1A; elongation factor 1-alpha D MNEG_13886 GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1 C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D MNEG_14519 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MNEG_4622 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MNEG_7147 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MNEG_2506 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MNEG_12959 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MNEG_13045 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MNEG_1748 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MNEG_8341 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MNEG_8762 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MNEG_3626 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MNEG_8738 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MNEG_5477 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MNEG_2672 hypothetical protein K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1 D MNEG_2461 methionyl-tRNA synthetase K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1 C Other AARSs D MNEG_3729 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MNEG_1505 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MNEG_7753 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MNEG_8142 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MNEG_1393 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MNEG_7725 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MNEG_10928 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MNEG_9290 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MNEG_15584 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MNEG_0429 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MNEG_0480 phenylalanyl-tRNA synthetase alphachain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MNEG_9551 phenylalanyl-tRNA synthetase alphachain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MNEG_14643 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MNEG_10415 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MNEG_13247 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D MNEG_3447 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors B tRNA modification factors C Deaminases D MNEG_9386 hypothetical protein K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-] C Dihydorouridine synthases D MNEG_3305 tRNA-dihydrouridine synthase 1 K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88] D MNEG_0739 tRNA-dihydrouridine synthase 3 K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89] D MNEG_5928 tRNA-dihydrouridine synthase 3 K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89] C Methylthiotransferase C Methyltransferases D MNEG_12498 tRNA (guanine-N2-)-methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D MNEG_15282 tRNA (guanine-N2-)-methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D MNEG_7356 hypothetical protein K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-] D MNEG_15166 hypothetical protein K15335 NSUN2; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203] D MNEG_7201 Putative methyltransferase NSUN6 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-] D MNEG_3100 Putative methyltransferase NSUN6 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-] D MNEG_15255 hypothetical protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D MNEG_1156 tRNA (adenine-N1-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D MNEG_5481 ribosomal RNA large subunit methyltransferase E K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205] D MNEG_4531 hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D MNEG_6254 hypothetical protein K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-] D MNEG_3576 putative Alkylated DNA repair protein alkB K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229] D MNEG_1653 RNA (guanine-9-)-methyltransferasedomain-containing protein 3 K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221] D MNEG_11747 hypothetical protein K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221] D MNEG_0423 hypothetical protein K15448 TRM112; multifunctional methyltransferase subunit TRM112 D MNEG_1783 Nef-associated protein 1 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] C Psudouridine synthases D MNEG_5058 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_1737 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_2144 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_2145 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_7855 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_14207 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D MNEG_12593 tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] D MNEG_0539 tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] D MNEG_14184 hypothetical protein K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-] D MNEG_9896 hypothetical protein K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-] D MNEG_12782 hypothetical protein K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2 D MNEG_8116 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MNEG_10959 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MNEG_8167 adenylyltransferase andsulfurtransferase MOCS3/UBA4 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11] C KEOPS/EKC complex D MNEG_1227 TP53 regulating kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D MNEG_6204 O-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D MNEG_1774 O-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D MNEG_1170 hypothetical protein K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121 C Elongator complex D MNEG_8307 elongator complex protein 1 K11373 ELP1; elongator complex protein 1 D MNEG_5072 elongator complex protein 2 K11374 ELP2; elongator complex protein 2 C Elongator related proteins D MNEG_8322 putative Protein KTI12 like protein K15456 KTI12; protein KTI12 C Other tRNA modification factors D MNEG_0543 Uncharacterized protein ywlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MNEG_8619 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MNEG_5968 enoyl-CoA hydratase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MNEG_2252 tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MNEG_9127 tRNA uridine 5-carboxymethylaminomethylmodification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MNEG_6093 queuine tRNA-ribosyltransferase domain containing 1 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit D MNEG_11715 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D MNEG_6423 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1 D MNEG_7545 tRNA(His) guanylyltransferase K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79] D MNEG_4156 arginine-tRNA-protein transferase K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8] B tRNA degradation factors C TRAMP complex D MNEG_12964 poly(a) polymerase K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] D MNEG_2028 poly(a) polymerase K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] C Rapid tRNA decay (RTD) pathway factors C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D MNEG_1725 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MNEG_5777 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MNEG_9978 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MNEG_7438 Nuclear ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MNEG_13461 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D MNEG_5816 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] C CCA adding factors B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases D MNEG_5458 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] C Other tRNA splicing factors B tRNA transport factors C tRNA export factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D MNEG_1748 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MNEG_7147 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MNEG_2506 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MNEG_12959 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D MNEG_14643 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MNEG_10415 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MNEG_13247 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MNEG_1393 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MNEG_7725 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MNEG_13045 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MNEG_3626 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MNEG_8738 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MNEG_3729 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MNEG_9290 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MNEG_8341 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MNEG_5477 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MNEG_0669 glycyl-tRNA synthetase alpha chain K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D MNEG_10928 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MNEG_14519 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MNEG_4622 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MNEG_8762 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MNEG_0480 phenylalanyl-tRNA synthetase alphachain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MNEG_9551 phenylalanyl-tRNA synthetase alphachain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MNEG_15584 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MNEG_0429 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MNEG_1505 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MNEG_7753 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] C Trans-editing factors D MNEG_3447 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] B tRNA modification factors C Deaminases C Dihydorouridine synthases D MNEG_3864 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] C Methylthiotransferases C Methyltransferases D MNEG_4531 hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D MNEG_5968 enoyl-CoA hydratase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MNEG_2252 tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MNEG_6247 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D MNEG_1783 Nef-associated protein 1 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D MNEG_8824 hypothetical protein K03437 spoU; RNA methyltransferase, TrmH family C Psudouridine synthases D MNEG_5058 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_1737 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_2144 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_2145 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_7855 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MNEG_14207 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D MNEG_8116 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MNEG_10959 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex D MNEG_1227 TP53 regulating kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D MNEG_6204 O-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D MNEG_1774 O-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] C Other tRNA modification factors D MNEG_9127 tRNA uridine 5-carboxymethylaminomethylmodification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MNEG_8619 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MNEG_11715 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D MNEG_0543 Uncharacterized protein ywlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MNEG_9250 Uncharacterized protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D MNEG_6623 Uncharacterized protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase B tRNA degradation factors C MNEG_11091 polyribonucleotidenucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C MNEG_16247 polyribonucleotidenucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024