+E Transcription factors KO #

  Transcription Factors - Mycolicibacterium rhodesiae

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D MycrhN_3844 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D MycrhN_5521 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] C LysR family D MycrhN_1447 transcriptional regulator, ArgP family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor C DeoR family D MycrhN_1625 transcriptional regulator of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D MycrhN_4196 ABC-type sugar transport system, periplasmic component K02529 galR; LacI family transcriptional regulator, galactose operon repressor C GntR family D MycrhN_1525 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MycrhN_2710 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MycrhN_3129 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MycrhN_6070 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MycrhN_1392 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MycrhN_4942 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MycrhN_3592 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MycrhN_4754 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MycrhN_1960 transcriptional regulator with HTH domain and aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D MycrhN_6334 transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D MycrhN_5236 transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D MycrhN_3473 Tetracyclin repressor, C-terminal all-alpha domain protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D MycrhN_0480 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D MycrhN_1129 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D MycrhN_3874 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MycrhN_1659 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MycrhN_2701 transcriptional regulator K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D MycrhN_5804 transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D MycrhN_1894 transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D MycrhN_5290 transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D MycrhN_0039 transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MycrhN_6133 transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MycrhN_2239 transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MycrhN_2464 transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MycrhN_2268 transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MycrhN_6093 transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D MycrhN_0711 mycofactocin system transcriptional regulator K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system D MycrhN_4178 transcriptional regulator K27107 mce3R; TetR/AcrR family transcriptional regulator, mce3 operon repressor C Lrp/AsnC family D MycrhN_0510 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D MycrhN_0461 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D MycrhN_4191 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism C MarR family D MycrhN_3180 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D MycrhN_1861 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D MycrhN_2863 putative transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D MycrhN_3386 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D MycrhN_1338 putative transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D MycrhN_6319 putative transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D MycrhN_1897 putative transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D MycrhN_5923 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D MycrhN_4347 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D MycrhN_4977 Fe2+/Zn2+ uptake regulation protein K22297 furA; Fur family transcriptional regulator, stress-responsive regulator C IclR family D MycrhN_1559 transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor C CRP/FNR family D MycrhN_2137 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MycrhN_0956 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family C ArsR family D MycrhN_4467 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D MycrhN_0986 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D MycrhN_2856 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D MycrhN_4223 putative transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D MycrhN_5695 putative transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D MycrhN_4348 putative transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D MycrhN_1178 putative transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D MycrhN_5625 putative transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family C Other families D MycrhN_5576 Mn-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D MycrhN_5656 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D MycrhN_4830 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D MycrhN_0436 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D MycrhN_3031 transcriptional activator of acetoin/glycerol metabolism K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D MycrhN_1906 Helix-turn-helix protein K27097 espR; ESX-1-secreted protein regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D MycrhN_2961 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MycrhN_0421 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MycrhN_2131 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MycrhN_0573 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MycrhN_0362 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MycrhN_1863 Transcription factor WhiB K18957 whiB6; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MycrhN_3884 Transcription factor WhiB K18957 whiB6; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MycrhN_0336 Transcription factor WhiB-like protein K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MycrhN_2801 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MycrhN_1552 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MycrhN_2826 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MycrhN_1209 DNA-binding transcriptional activator of the SARP family K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MycrhN_0401 DNA-binding transcriptional activator of the SARP family K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MycrhN_1374 DNA-binding transcriptional activator of the SARP family K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MycrhN_3495 DNA-binding transcriptional activator of the SARP family K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MycrhN_1811 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MycrhN_2222 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D MycrhN_4665 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D MycrhN_4330 heat shock gene repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D MycrhN_1732 putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D MycrhN_0738 phenylacetic acid-responsive transcriptional repressor K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D MycrhN_3437 phenylacetic acid-responsive transcriptional repressor K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D MycrhN_5380 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D MycrhN_5194 transcriptional regulator K07734 paiB; transcriptional regulator D MycrhN_1797 putative transcriptional regulator K07735 algH; putative transcriptional regulator D MycrhN_5583 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D MycrhN_4542 mraZ protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0