+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Notothenia coriiceps (black rockcod)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 104946009 fbl; rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 104941153 nop56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 104958404 nop58; nucleolar protein 58 isoform X1 K14565 NOP58; nucleolar protein 58 D 104958529 nhp2l1; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 104954045 H/ACA ribonucleoprotein complex subunit 4-like K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 104964164 gar1; H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 104943500 nop10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 104966338 shq1; protein SHQ1 homolog K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D 104967686 imp4; U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 104944338 U3 small nucleolar ribonucleoprotein protein MPP10-like K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 104944339 mphosph10; U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 104941942 ngdn; neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 104962858 rrp7a; ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7 D 104943748 periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2 D 104949922 periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2 D 104940965 nucleolar protein 14-like K14766 NOP14; nucleolar protein 14 D 104951535 utp3; something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 104959685 cirhin-like K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 104950676 wdr43; WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 104947974 utp6; U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 104957812 wdr46; WD repeat-containing protein 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 104941901 utp11l; probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 104954256 WD repeat-containing protein 3-like K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 104957870 tbl3; transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 104952618 U3 small nucleolar RNA-associated protein 14 homolog A-like K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 104956798 U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 104945405 noc4l; nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 104943308 small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 104943307 utp20; small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 104951925 nol6; nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 104957074 utp23; rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 104963640 fcf1; rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 104952108 digestive organ expansion factor-like K14774 UTP25; U3 small nucleolar RNA-associated protein 25 C Helicases D 104955118 ddx10; probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 104952021 ddx18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 104958141 ddx49; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 104945657 ddx52; probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 104948617 dhx15; putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 104943565 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 104956697 dhx37; probable ATP-dependent RNA helicase DHX37 isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] C GTPase D 104944184 ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 104961442 drosha; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D 104964184 rexo4; RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 104952702 sterol regulatory element-binding protein 2-like K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] D 104945641 lariat debranching enzyme-like K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 104967985 casein kinase II subunit alpha'-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 104965582 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 104965727 casein kinase II subunit alpha'-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 104960282 casein kinase II subunit alpha-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 104953781 csnk2b; casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta D 104965578 casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 104944002 aatf; protein AATF K14782 AATF; protein AATF/BFR2 D 104964395 cmss1; protein CMSS1 K14784 CMS1; protein CMS1 D 104961619 abt1; activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein D 104953123 krr1; LOW QUALITY PROTEIN: KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 104947827 rbm19; LOW QUALITY PROTEIN: probable RNA-binding protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 104942798 nat10; N-acetyltransferase 10 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 104956242 nucleolin-like isoform X1 K11294 NCL; nucleolin D 104961923 ncl; nucleolin K11294 NCL; nucleolin D 104943416 nucleolar protein 10-like K14788 NOL10; ribosome biogenesis protein ENP2 D 104943417 nucleolar protein 10-like K14788 NOL10; ribosome biogenesis protein ENP2 D 104962273 pinx1; PIN2/TERF1-interacting telomerase inhibitor 1 K11135 PINX1; Pin2-interacting protein X1 D 104953674 pwp1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 104967886 rcl1; RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 104952616 protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5 D 104965623 rrp9; U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9 D 104956823 rrp12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 104962045 rrp36; ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 104967061 dcaf13; DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 104947803 riok2; serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 104943775 dimt1; probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 104959778 wbscr22; probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 104948277 mettl5; methyltransferase-like protein 5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 104957026 bysl; bystin K14797 ENP1; essential nuclear protein 1 D 104953376 ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 104943912 ak6; adenylate kinase isoenzyme 6 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 104958430 tsr1; pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 104946335 tsr3; ribosome biogenesis protein TSR3 homolog K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 104955719 pdcd2l; programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4 D 104961694 xpo1; exportin-1 K14290 XPO1; exportin-1 D 104952204 transportin-1 isoform X1 K18752 TNPO1; transportin-1 D 104953922 ipo4; importin-4 K20221 IPO4; importin-4 D 104948986 ipo5; importin-5 K20222 IPO5; importin-5 D 104962965 ipo7; importin-7 K20223 IPO7; importin-7 D 104961564 ipo9; importin-9 K20224 IPO9; importin-9 C Other pre-40S particles D 104956972 atp8a1; phospholipid-transporting ATPase IA isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 104948601 eif3j; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J B Pre-60S particles C Helicases D 104957960 probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 104944580 ddx5; probable ATP-dependent RNA helicase DDX5 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 104952021 ddx18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 104941865 ddx24; ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 104956562 ddx54; ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 104956834 ddx55; ATP-dependent RNA helicase DDX55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 104948016 ddx56; probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] C GTPases D 104945726 gnl3l; guanine nucleotide-binding protein-like 3-like protein K14538 NUG1; nuclear GTP-binding protein D 104943014 gnl3; guanine nucleotide-binding protein-like 3 K14538 NUG1; nuclear GTP-binding protein D 104941904 gnl2; nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein D 104954194 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D 104963154 lsg1; large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 104952841 uncharacterized protein LOC104952841 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 104949973 rexo2; oligoribonuclease, mitochondrial isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-] D 104961199 RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 104965442 putative RNA exonuclease NEF-sp K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 104942866 rexo1; RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-] D RNase MRP E 104958668 pop1; ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 104960843 ribonuclease P protein subunit p29-like K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 104955529 pop5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 104946301 pop7; ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] E 104953496 uncharacterized protein LOC104953496 isoform X1 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 104953506 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 104942708 rpp25; ribonuclease P protein subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 104959142 rpp38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] C Kinases D 104958057 uncharacterized protein LOC104958057 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 104954585 abcf2; ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 104961014 dnajc21; dnaJ homolog subfamily C member 21 isoform X1 K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 104954997 hspa8; heat shock cognate 71 kDa protein isoform X1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 104961379 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 104945953 hspa6; heat shock 70 kDa protein 6 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 104944608 heat shock cognate 71 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 104942238 heat shock 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 104958588 mrto4; mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4 D 104954276 nmd3; 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D 104968006 nxf1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor D 104956337 nxt2; NTF2-related export protein 2 K14285 NXT1_2; NTF2-related export protein 1/2 D 104953376 ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 104955906 znf622; zinc finger protein 622 K14816 REI1; pre-60S factor REI1 D 104957741 spata5; spermatogenesis-associated protein 5 K14575 AFG2; AAA family ATPase D 104951151 spata5l1; spermatogenesis-associated protein 5-like protein 1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10] D 104957831 uncharacterized protein C1orf109 homolog K26053 C1ORF109; ribosome biogenesis protein C1orf109 D 104961694 xpo1; exportin-1 K14290 XPO1; exportin-1 D 104952204 transportin-1 isoform X1 K18752 TNPO1; transportin-1 D 104953922 ipo4; importin-4 K20221 IPO4; importin-4 D 104948986 ipo5; importin-5 K20222 IPO5; importin-5 D 104962965 ipo7; importin-7 K20223 IPO7; importin-7 D 104961564 ipo9; importin-9 K20224 IPO9; importin-9 C 5-FMC complex D 104952996 tex10; testis-expressed sequence 10 protein K14827 IPI1; pre-rRNA-processing protein IPI1 D 104941642 las1l; ribosomal biogenesis protein LAS1L K16912 LAS1; ribosomal biogenesis protein LAS1 D 104944621 LOW QUALITY PROTEIN: proline-, glutamic acid- and leucine-rich protein 1-like K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1 D 104962536 sentrin-specific protease 3-like K08593 SENP3; sentrin-specific protease 3 [EC:3.4.22.68] C Ribosome quality control proteins D 104945891 E3 ubiquitin-protein ligase listerin-like K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 104946667 E3 ubiquitin-protein ligase listerin-like K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 104965307 tcf25; transcription factor 25 K24970 TCF25; transcription factor 25 D 104968034 nemf; nuclear export mediator factor NEMF K24971 NEMF; nuclear export mediator factor NEMF D 104956096 vcp; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D 104959405 nploc4; nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4 D 104956695 ufd1l; ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1 D 104951876 ptrhd1; putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] D 104943025 ankzf1; ankyrin repeat and zinc finger domain-containing protein 1 isoform X1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 104961013 brix1; ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1 D 104962197 znf593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20 D 104952602 ccdc86; coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1 D 104963657 ebna1bp2; probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2 D 104957643 transmembrane emp24 domain-containing protein 5-like K14825 TMED5; p24 family protein gamma-2 D 104950917 pak1ip1; p21-activated protein kinase-interacting protein 1 K14830 MAK11; protein MAK11 D 104959449 mak16; protein MAK16 homolog K14831 MAK16; protein MAK16 D 104961443 CCAAT/enhancer-binding protein zeta-like K14832 MAK21; ribosome biogenesis protein MAK21 D 104967034 nip7; 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 104950365 noc2l; nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2 D 104957145 probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 104959120 RNA-binding protein 28-like K14573 NOP4; nucleolar protein 4 D 104951283 nucleolar protein 8-like K14836 NOP8; nucleolar protein 8 D 104942442 rbm34; RNA-binding protein 34 K14837 NOP12; nucleolar protein 12 D 104958084 nifk; MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15 D 104951138 gltscr2; glioma tumor suppressor candidate region gene 2 protein K14840 NOP53; nucleolar protein 53 D 104961470 wdr74; WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 104957411 nsa2; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 104963960 pumilio domain-containing protein KIAA0020 homolog K14844 PUF6; pumilio homology domain family member 6 D 104953674 pwp1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 104947693 dxo; decapping and exoribonuclease protein K14845 RAI1; RAT1-interacting protein D 104950067 bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D 104958373 mina; bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66] D 104959249 nuclear valosin-containing protein-like K14571 RIX7; ribosome biogenesis ATPase D 104957392 ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 104960447 grwd1; glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1 D 104949950 ribosomal RNA processing protein 1 homolog A-like K14849 RRP1; ribosomal RNA-processing protein 1 D 104947433 rrp8; ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 104956823 rrp12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 104947873 nol12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17 D 104953157 rrs1; ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 104945605 nle1; notchless protein homolog 1 K14855 RSA4; ribosome assembly protein 4 D 104954554 sdad1; protein SDA1 homolog K14856 SDA1; protein SDA1 D 104947670 LOW QUALITY PROTEIN: pre-rRNA processing protein FTSJ3-like K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 104950896 suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 104957458 LOW QUALITY PROTEIN: nucleolar pre-ribosomal-associated protein 1-like K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 104967341 urb2; unhealthy ribosome biogenesis protein 2 homolog K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D 104958403 wdr12; ribosome biogenesis protein WDR12 K14863 WDR12; ribosome biogenesis protein D 104958406 nufip1; nuclear fragile X mental retardation-interacting protein 1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 D 104956342 znhit3; zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 104959041 bccip; BRCA2 and CDKN1A-interacting protein K15262 BCP1; protein BCP1 C 104965757 lyar; cell growth-regulating nucleolar protein isoform X1 K15263 LYER; cell growth-regulating nucleolar protein C 104954312 nsun4; 5-methylcytosine rRNA methyltransferase NSUN4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] C 104955800 nsun5; probable 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 104950249 tfb1m; dimethyladenosine transferase 1, mitochondrial K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-] C 104945457 mrm1; rRNA methyltransferase 1, mitochondrial K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 104945160 probable methyltransferase BTM2 homolog isoform X1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C 104963833 rnmtl1; rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 104953644 zinc finger CCHC domain-containing protein 4-like K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-] C 104947342 ddx28; probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 104961492 dhx33; putative ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6] C 104945743 ighmbp2; LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 104965808 isg20l2; interferon-stimulated 20 kDa exonuclease-like 2 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-] C 104966029 kdm8; lysine-specific demethylase 8 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C 104944541 phf6; PHD finger protein 6 K23310 PHF6; PHD finger protein 6 C 104963927 eral1; GTPase Era, mitochondrial K03595 era; GTPase C 104942935 uncharacterized protein C12orf45 homolog K26142 NOPCHAP1; NOP protein chaperone 1 C 104941410 pa2g4; proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein C 104956884 proliferation-associated protein 2G4-like K26736 PA2G4; ERBB-3 binding protein C 104961334 mtg1; mitochondrial ribosome-associated GTPase 1 K19828 MTG1; mitochondrial GTPase 1 C 104953797 mtg2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 104941153 nop56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 104967994 60S ribosomal protein L7a-like K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D 104961981 rpl7a; 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 104954045 H/ACA ribonucleoprotein complex subunit 4-like K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 104943500 nop10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D 104964487 ftsj2; rRNA methyltransferase 2, mitochondrial K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors C 104961442 drosha; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C 104963927 eral1; GTPase Era, mitochondrial K03595 era; GTPase C 104953797 mtg2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C 104965871 yrdc; yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024