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  Transcription Machinery - Naegleria gruberi

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AEukaryotic type B RNA polymerase II system C RNA polymerase II D Core subunits E NAEGRDRAFT_51024 RNA polymerase II K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] E NAEGRDRAFT_58671 RNA polymerase II largest subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] E NAEGRDRAFT_59892 DNA-directed RNA polymerase II K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] E NAEGRDRAFT_61034 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 E NAEGRDRAFT_29567 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 D Pol II specific subunits E NAEGRDRAFT_64024 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 E NAEGRDRAFT_74650 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E NAEGRDRAFT_72143 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 D Pol I, II, III common subunits E NAEGRDRAFT_29724 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E NAEGRDRAFT_33993 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E NAEGRDRAFT_71611 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E NAEGRDRAFT_61926 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E NAEGRDRAFT_88233 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 D Pol IV and V specific subunits C Basal transcription factors D TFIIA E NAEGRDRAFT_88235 hypothetical protein K03122 TFIIA1; transcription initiation factor TFIIA large subunit E NAEGRDRAFT_63919 hypothetical protein K03123 TFIIA2; transcription initiation factor TFIIA small subunit D TFIIB E NAEGRDRAFT_58428 transcription initiation factor K03124 TFIIB; transcription initiation factor TFIIB D TFIID E NAEGRDRAFT_78851 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein E NAEGRDRAFT_48788 hypothetical protein K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] E NAEGRDRAFT_65369 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2 E NAEGRDRAFT_81220 transcription initiation factor TFIID subunit K03130 TAF5; transcription initiation factor TFIID subunit 5 E NAEGRDRAFT_1097 hypothetical protein K03131 TAF6; transcription initiation factor TFIID subunit 6 E NAEGRDRAFT_4666 hypothetical protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B E NAEGRDRAFT_71677 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10 E NAEGRDRAFT_45427 hypothetical protein K03135 TAF11; transcription initiation factor TFIID subunit 11 E NAEGRDRAFT_5555 hypothetical protein K03127 TAF13; transcription initiation factor TFIID subunit 13 D TFIIE E NAEGRDRAFT_61798 AM36; hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha E NAEGRDRAFT_76715 hypothetical protein K03137 TFIIE2; transcription initiation factor TFIIE subunit beta D TFIIF E NAEGRDRAFT_77700 transcription initiation factor IIF, beta subunit K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] D TFIIH E NAEGRDRAFT_61113 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 E NAEGRDRAFT_34964 RNA polymerase II transcription factor TFIIH subunit K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E NAEGRDRAFT_68603 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E NAEGRDRAFT_68362 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E NAEGRDRAFT_50960 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E NAEGRDRAFT_29347 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E NAEGRDRAFT_80698 DNA repair helicase UVH6 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E NAEGRDRAFT_2502 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E NAEGRDRAFT_50931 cyclin box fold domain-containing protein K06634 CCNH; cyclin H C Mediator complex D Head E NAEGRDRAFT_61462 AM43; hypothetical protein K15128 MED6; mediator of RNA polymerase II transcription subunit 6 E NAEGRDRAFT_64535 hypothetical protein K13528 MED20; mediator of RNA polymerase II transcription subunit 20 D Middle E NAEGRDRAFT_79577 diaphanous-related formin K15146 MED4; mediator of RNA polymerase II transcription subunit 4 E NAEGRDRAFT_66495 hypothetical protein K15148 MED7; mediator of RNA polymerase II transcription subunit 7 D Tail E NAEGRDRAFT_65043 hypothetical protein K15156 MED14; mediator of RNA polymerase II transcription subunit 14 D CDK-module E NAEGRDRAFT_34339 hypothetical protein K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] E NAEGRDRAFT_70082 hypothetical protein K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] E NAEGRDRAFT_34974 hypothetical protein K15161 CCNC; cyclin-C D Other mediators E NAEGRDRAFT_64052 hypothetical protein K15166 MED23; mediator of RNA polymerase II transcription subunit 23 C Coactivators D SAGA/TFTC/STAGA complex E NAEGRDRAFT_60527 histone acetyltransferase gcn5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] E NAEGRDRAFT_62046 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein E NAEGRDRAFT_51665 hypothetical protein K11313 SUPT3H; transcription initiation protein SPT3 E NAEGRDRAFT_81671 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha E NAEGRDRAFT_65369 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2 E NAEGRDRAFT_81220 transcription initiation factor TFIID subunit K03130 TAF5; transcription initiation factor TFIID subunit 5 E NAEGRDRAFT_1097 hypothetical protein K03131 TAF6; transcription initiation factor TFIID subunit 6 E NAEGRDRAFT_4666 hypothetical protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B E NAEGRDRAFT_71677 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10 E NAEGRDRAFT_50702 hypothetical protein K11364 SGF29; SAGA-associated factor 29 E NAEGRDRAFT_59107 ubiquitin specific protease-like protein K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] E NAEGRDRAFT_45594 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3 D BAF/PBAF complex E NAEGRDRAFT_77946 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D E NAEGRDRAFT_64978 bromodomain-containing protein K11757 PBRM1; protein polybromo-1 D SWI/SNF complex E NAEGRDRAFT_64610 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] D RSC complex E NAEGRDRAFT_64610 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] D Others C Other transcription-related factors D Transcription elongation factors E NAEGRDRAFT_70690 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4 E NAEGRDRAFT_80805 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5 E NAEGRDRAFT_50018 hypothetical protein K11292 SUPT6H; transcription elongation factor SPT6 D Transcription termination factor E NAEGRDRAFT_61662 hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 E NAEGRDRAFT_80983 CPSF A subunit K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E NAEGRDRAFT_72801 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E NAEGRDRAFT_4809 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E NAEGRDRAFT_56375 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E NAEGRDRAFT_80124 symplekin K06100 SYMPK; symplekin E NAEGRDRAFT_50257 hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] E NAEGRDRAFT_79174 5'-3' exoribonuclease 1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] E NAEGRDRAFT_57596 5'-3' exoribonuclease K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] E NAEGRDRAFT_53150 hypothetical protein K15559 RTT103; regulator of Ty1 transposition protein 103 E NAEGRDRAFT_35433 rotamase domain-containing protein K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] D PAF1 complex E NAEGRDRAFT_53621 hypothetical protein K15174 PAF1; RNA polymerase II-associated factor 1 E NAEGRDRAFT_61248 hypothetical protein K15175 CDC73; parafibromin E NAEGRDRAFT_47250 hypothetical protein K15176 CTR9; RNA polymerase-associated protein CTR9 E NAEGRDRAFT_53398 hypothetical protein K15177 LEO1; RNA polymerase-associated protein LEO1 E NAEGRDRAFT_61368 hypothetical protein K15178 RTF1; RNA polymerase-associated protein RTF1 D NELF complex E NAEGRDRAFT_71340 AM37; hypothetical protein K15181 TH1L; negative elongation factor C/D D Super elongation complex (SEC) E NAEGRDRAFT_82109 hypothetical protein K15186 EAF; ELL-associated factor D Little elongation complex (LEC) D Brd4/P-TEFb complex D BUR kinase complex D CTDK-I complex D 7SK RNP complex E NAEGRDRAFT_45643 hypothetical protein K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] D DBIRD complex D Others E NAEGRDRAFT_35388 TATA-binding protein-associated factor 172 K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] E NAEGRDRAFT_45181 hypothetical protein K21751 DR1; down-regulator of transcription 1 E NAEGRDRAFT_68261 hypothetical protein K15193 SPTY2D1; protein SPT2 E NAEGRDRAFT_45146 TFIIF CTD phosphatase Fcp1 K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] E NAEGRDRAFT_80218 NLI interacting factor domain-containing protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] E NAEGRDRAFT_66738 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] E NAEGRDRAFT_4263 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] E NAEGRDRAFT_61190 hypothetical protein K17498 SPN1; transcription factor SPN1 E NAEGRDRAFT_61414 hypothetical protein K20826 RPAP1; RNA polymerase II-associated protein 1 E NAEGRDRAFT_78262 TPR repeat domain protein K23002 RPAP3; RNA polymerase II-associated protein 3 E NAEGRDRAFT_78346 transcriptional repressor TUP1 K06666 TUP1; general transcriptional corepressor TUP1 E NAEGRDRAFT_79260 TPR repeat domain-containing protein K06665 SSN6; general transcriptional corepressor CYC8 E NAEGRDRAFT_81157 hypothetical protein K12412 MCM1; pheromone receptor transcription factor E NAEGRDRAFT_29598 hypothetical protein K24104 GPN; GPN-loop GTPase E NAEGRDRAFT_79112 ATP binding domain family protein K24104 GPN; GPN-loop GTPase E NAEGRDRAFT_44893 hypothetical protein K24104 GPN; GPN-loop GTPase E NAEGRDRAFT_31952 hypothetical protein K24104 GPN; GPN-loop GTPase B RNA polymerase III system C RNA polymerase III D Core subunits E NAEGRDRAFT_35014 hypothetical protein K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] E NAEGRDRAFT_29098 hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 E NAEGRDRAFT_80573 13 to 16 kDa subunit of RNA polymerase K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 D Pol III specific subunits E NAEGRDRAFT_66106 hypothetical protein K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 E NAEGRDRAFT_77856 DNA-directed RNA polymerase III RPC4, polypeptide D K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 E NAEGRDRAFT_52042 hypothetical protein K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 E NAEGRDRAFT_29241 hypothetical protein K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 E NAEGRDRAFT_29266 hypothetical protein K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 E NAEGRDRAFT_69676 hypothetical protein K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 D Pol I, II, III common subunits E NAEGRDRAFT_29724 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E NAEGRDRAFT_33993 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E NAEGRDRAFT_71611 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E NAEGRDRAFT_61926 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E NAEGRDRAFT_88233 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 C Basal transcription factors D TFIIIA D TFIIIB E NAEGRDRAFT_78851 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein E NAEGRDRAFT_61196 transcription factor K15196 BRF1; transcription factor IIIB 90 kDa subunit E NAEGRDRAFT_53891 hypothetical protein K15196 BRF1; transcription factor IIIB 90 kDa subunit E NAEGRDRAFT_78613 hypothetical protein K15198 BDP1; transcription factor TFIIIB component B'' D TFIIIC E NAEGRDRAFT_61241 hypothetical protein K15199 GTF3C1; general transcription factor 3C polypeptide 1 E NAEGRDRAFT_64687 WD40 domain-containing protein K15200 GTF3C2; general transcription factor 3C polypeptide 2 E NAEGRDRAFT_79599 transcription factor IIIC-gamma subunit K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) E NAEGRDRAFT_57146 RNA polymerase III transcription factor TFIIIC subunit K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) D TFIIIC, fungi type E NAEGRDRAFT_57146 RNA polymerase III transcription factor TFIIIC subunit K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) E NAEGRDRAFT_79599 transcription factor IIIC-gamma subunit K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) C Other transcription-related factors D snRNA-activating protein complex (SNAPc) E NAEGRDRAFT_61253 hypothetical protein K15210 SNAPC3; snRNA-activating protein complex subunit 3 D Octamer transcription factors D Others B RNA polymerase I system C RNA polymerase I D Core subunits E NAEGRDRAFT_29098 hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 E NAEGRDRAFT_80573 13 to 16 kDa subunit of RNA polymerase K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 D Pol I specific subunits E NAEGRDRAFT_47843 hypothetical protein K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 E NAEGRDRAFT_61596 hypothetical protein K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 D Pol I, II, III common subunits E NAEGRDRAFT_29724 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E NAEGRDRAFT_33993 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E NAEGRDRAFT_71611 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E NAEGRDRAFT_61926 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E NAEGRDRAFT_88233 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 C Basal transcription factors D SL1/TIF-1B E NAEGRDRAFT_78851 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein C Other transcription-related factors D UBF D Transcription initiation factors E NAEGRDRAFT_52953 hypothetical protein K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 D Transcription elongation factors E NAEGRDRAFT_70690 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4 E NAEGRDRAFT_80805 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5 D NoRC (nucleolar remodeling complex) E NAEGRDRAFT_60899 hypothetical protein K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] E NAEGRDRAFT_61958 hypothetical protein K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] D CTDK-I complex D Transcription termination factors D Others E NAEGRDRAFT_56505 SRP40 domain-containing protein K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 # AProkaryotic type B Bacterial type C RNA polymerase D Core subunits D Sigma factors C Other transcription-related factors D RNA polymerase-associated proteins D Transcription elongation factors D Transcription termination factor B Archaeal type C RNA polymerase D Core subunits C Basal transcription factors D TFB E NAEGRDRAFT_58428 transcription initiation factor K03124 TFIIB; transcription initiation factor TFIIB D TFE E NAEGRDRAFT_61798 AM36; hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D TFS ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024