+D GENES KO
#
KEGG Orthology (KO) - Cutibacterium acnes SK137
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pak00010]
D HMPREF0675_3791 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0675_5192 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0675_5342 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0675_3156 pfkB; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D HMPREF0675_3093 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HMPREF0675_4153 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D HMPREF0675_5089 putative fructose-bisphosphate aldolase class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0675_5077 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0675_3883 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF0675_3881 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0675_3882 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0675_3405 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_3875 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_3597 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0675_3837 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0675_5113 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HMPREF0675_4049 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HMPREF0675_3762 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_3202 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HMPREF0675_4961 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HMPREF0675_4962 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HMPREF0675_3945 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_3011 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_5012 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_3591 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF0675_4135 GroES-like protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HMPREF0675_4074 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF0675_4167 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0675_5182 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D HMPREF0675_5117 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D HMPREF0675_3061 family 4 glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0675_4206 glycosyl hydrolase, family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0675_3339 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3749 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3340 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:pak00020]
D HMPREF0675_5349 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HMPREF0675_4476 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HMPREF0675_4121 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HMPREF0675_4792 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HMPREF0675_4325 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_4961 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HMPREF0675_4962 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HMPREF0675_4809 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HMPREF0675_4811 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HMPREF0675_5118 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HMPREF0675_4008 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF0675_4491 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF0675_4009 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF0675_4490 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF0675_4007 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HMPREF0675_4492 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HMPREF0675_5368 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HMPREF0675_4794 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HMPREF0675_4049 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HMPREF0675_3762 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HMPREF0675_3202 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pak00030]
D HMPREF0675_5192 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0675_4630 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF0675_4632 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D HMPREF0675_4591 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D HMPREF0675_4667 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF0675_4261 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF0675_5396 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF0675_3492 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HMPREF0675_5403 putative ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HMPREF0675_4661 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HMPREF0675_5110 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HMPREF0675_4279 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HMPREF0675_3016 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF0675_4276 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF0675_4167 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0675_3582 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0675_5194 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HMPREF0675_3412 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HMPREF0675_3940 kinase, PfkB family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D HMPREF0675_3411 kinase, PfkB family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D HMPREF0675_5089 putative fructose-bisphosphate aldolase class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0675_5077 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0675_5342 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0675_3156 pfkB; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D HMPREF0675_3093 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HMPREF0675_4153 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pak00040]
D HMPREF0675_5409 putative glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D HMPREF0675_5407 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D HMPREF0675_5408 mannitol dehydrogenase domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D HMPREF0675_5413 glycosyl hydrolase family 2, TIM barrel domain protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D HMPREF0675_3654 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF0675_3534 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0675_3937 pyrF; orotidine 5'-phosphate decarboxylase/HUMPS family K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D HMPREF0675_3938 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D HMPREF0675_3939 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HMPREF0675_5404 putative L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HMPREF0675_4261 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF0675_5397 araB; ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D HMPREF0675_3976 GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D HMPREF0675_3687 GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D HMPREF0675_3675 L-fucose isomerase domain protein K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
C 00051 Fructose and mannose metabolism [PATH:pak00051]
D HMPREF0675_3007 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0675_3489 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0675_4776 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HMPREF0675_4747 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HMPREF0675_3675 L-fucose isomerase domain protein K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D HMPREF0675_5342 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0675_3156 pfkB; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D HMPREF0675_3093 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HMPREF0675_4153 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D HMPREF0675_3976 GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D HMPREF0675_3687 GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D HMPREF0675_5089 putative fructose-bisphosphate aldolase class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0675_5077 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0675_3883 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF0675_3688 DAK1 domain protein K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D HMPREF0675_5403 putative ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HMPREF0675_4661 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HMPREF0675_5307 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D HMPREF0675_3155 putative ATP synthase F0, A subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF0675_3978 cmtA; EIICB-Mtl K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D HMPREF0675_4551 srlB; PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HMPREF0675_3396 PTS system glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HMPREF0675_4550 putative ATP synthase F0, A subunit K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D HMPREF0675_4549 srlA; PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:pak00052]
D HMPREF0675_4074 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF0675_5364 GHMP kinase, N-terminal domain protein K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0675_5262 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0675_3069 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0675_3534 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0675_4167 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0675_3791 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0675_4752 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF0675_3020 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D HMPREF0675_3406 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D HMPREF0675_3023 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3397 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3407 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3022 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D HMPREF0675_5342 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0675_3156 pfkB; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D HMPREF0675_3093 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HMPREF0675_4668 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HMPREF0675_5412 glycosyl hydrolase, family 31 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:pak00053]
D HMPREF0675_3654 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF0675_5413 glycosyl hydrolase family 2, TIM barrel domain protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D HMPREF0675_3483 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF0675_3482 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF0675_3937 pyrF; orotidine 5'-phosphate decarboxylase/HUMPS family K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D HMPREF0675_3938 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D HMPREF0675_3939 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HMPREF0675_5404 putative L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:pak00500]
D HMPREF0675_4203 phosphotransferase system, EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF0675_4668 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HMPREF0675_5412 glycosyl hydrolase, family 31 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HMPREF0675_3957 alpha amylase, catalytic domain protein K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D HMPREF0675_3534 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0675_4209 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0675_4207 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0675_4208 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0675_3061 family 4 glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0675_4206 glycosyl hydrolase, family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0675_3707 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF0675_4173 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF0675_3081 glgP; phosphorylase, glycogen/starch/alpha-glucan family K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HMPREF0675_4177 glgX; glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D HMPREF0675_4175 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D HMPREF0675_3653 alpha amylase, catalytic domain protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D HMPREF0675_4733 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HMPREF0675_4174 hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175]
D HMPREF0675_4176 alpha amylase, catalytic domain protein K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D HMPREF0675_3706 glgA; glycogen synthase, Corynebacterium family K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D HMPREF0675_3339 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3749 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_4019 putative alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D HMPREF0675_4020 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D HMPREF0675_4170 glycosyl hydrolase family 65 central catalytic domain protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D HMPREF0675_4167 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0675_3791 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0675_5192 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pak00520]
D HMPREF0675_5228 glycosyl hydrolase family 3 N-terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF0675_4687 glycosyl hydrolase family 3 N-terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF0675_3066 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0675_3339 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3749 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3744 phosphotransferase system, EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HMPREF0675_3527 putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HMPREF0675_3519 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HMPREF0675_4204 BadF/BadG/BcrA/BcrD ATPase family protein K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D HMPREF0675_4853 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF0675_4859 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HMPREF0675_3581 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF0675_3981 hypothetical protein K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D HMPREF0675_4202 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D HMPREF0675_4289 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0675_4947 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0675_5062 putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HMPREF0675_3162 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HMPREF0675_3147 bacterial transferase hexapeptide repeat protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D HMPREF0675_5386 hypothetical protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D HMPREF0675_3340 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HMPREF0675_3791 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0675_5182 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D HMPREF0675_4167 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0675_3534 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0675_3654 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF0675_5364 GHMP kinase, N-terminal domain protein K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0675_5262 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0675_3069 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0675_5192 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0675_3007 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0675_3489 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0675_4776 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HMPREF0675_4747 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HMPREF0675_3707 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pak00620]
D HMPREF0675_3202 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HMPREF0675_4961 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HMPREF0675_4962 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HMPREF0675_4049 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HMPREF0675_3762 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_3591 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF0675_4135 GroES-like protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HMPREF0675_3837 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0675_4772 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF0675_5118 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HMPREF0675_3945 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_3011 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_5012 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_4535 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D HMPREF0675_3845 FAD linked oxidase, C-terminal domain protein K18930 dld; D-lactate dehydrogenase
D HMPREF0675_4228 metallo-beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HMPREF0675_3946 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HMPREF0675_3355 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HMPREF0675_4794 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HMPREF0675_5368 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HMPREF0675_5414 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38]
D HMPREF0675_5113 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HMPREF0675_3997 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pak00630]
D HMPREF0675_4794 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HMPREF0675_5349 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HMPREF0675_4476 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HMPREF0675_4121 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HMPREF0675_4166 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D HMPREF0675_4759 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HMPREF0675_4772 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF0675_3660 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HMPREF0675_3661 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HMPREF0675_3844 cysteine-rich domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D HMPREF0675_3100 catalase K03781 katE; catalase [EC:1.11.1.6]
D HMPREF0675_5326 pdxB; 4-phosphoerythronate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D HMPREF0675_3731 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3740 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3410 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF0675_3810 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HMPREF0675_3812 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_3811 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D HMPREF0675_4146 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D HMPREF0675_5376 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF0675_5194 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HMPREF0675_3412 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HMPREF0675_4325 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D HMPREF0675_4793 putative formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pak00640]
D HMPREF0675_5145 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HMPREF0675_5144 Transketolase, pyridine binding domain protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HMPREF0675_5143 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_4772 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF0675_5073 conserved carboxylase domain protein K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D HMPREF0675_5072 methylmalonyl-CoA carboxyltransferase 12S subunit K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D HMPREF0675_5071 hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D HMPREF0675_5070 methylmalonyl-CoA carboxyltransferase 1.3S subunit K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D HMPREF0675_4759 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HMPREF0675_4166 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D HMPREF0675_3660 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HMPREF0675_3661 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HMPREF0675_4811 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HMPREF0675_4809 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HMPREF0675_3499 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HMPREF0675_3945 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_3011 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_5012 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:pak00650]
D HMPREF0675_4008 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF0675_4491 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF0675_4009 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF0675_4490 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF0675_4007 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HMPREF0675_4492 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HMPREF0675_3079 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HMPREF0675_5118 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HMPREF0675_3202 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HMPREF0675_4961 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HMPREF0675_4962 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HMPREF0675_4421 putative acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pak00660]
D HMPREF0675_4421 putative acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF0675_4811 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HMPREF0675_4809 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HMPREF0675_4407 3-isopropylmalate dehydratase small subunit family protein K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF0675_4418 hypothetical protein K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pak00562]
D HMPREF0675_3511 idhA; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HMPREF0675_3510 AP endonuclease, family 2 K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D HMPREF0675_3497 thiamine pyrophosphate enzyme, central domain protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D HMPREF0675_3496 myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D HMPREF0675_3494 kinase, PfkB family K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D HMPREF0675_3499 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HMPREF0675_3883 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pak00190]
D HMPREF0675_4993 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D HMPREF0675_4992 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D HMPREF0675_4959 NADH ubiquinone oxidoreductase, 20 Kd subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D HMPREF0675_4991 nuoC; NADH dehydrogenase, C subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D HMPREF0675_4958 respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D HMPREF0675_3322 respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D HMPREF0675_4990 nuoD; NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D HMPREF0675_4989 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D HMPREF0675_4988 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D HMPREF0675_4987 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D HMPREF0675_4986 NADH dehydrogenase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D HMPREF0675_4985 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D HMPREF0675_4957 4Fe-4S binding domain protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D HMPREF0675_4984 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D HMPREF0675_4983 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D HMPREF0675_4982 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D HMPREF0675_4981 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D HMPREF0675_4980 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D HMPREF0675_3166 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HMPREF0675_4008 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF0675_4491 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF0675_4009 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF0675_4490 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF0675_4007 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HMPREF0675_4492 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HMPREF0675_3780 rieske [2Fe-2S] domain protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HMPREF0675_3779 cytochrome b/b6 family protein K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D HMPREF0675_3781 cytochrome C K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D HMPREF0675_4628 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HMPREF0675_3772 hypothetical protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D HMPREF0675_3782 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D HMPREF0675_3771 ctaD; cytochrome c oxidase, subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D HMPREF0675_3770 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D HMPREF0675_4626 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HMPREF0675_3716 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HMPREF0675_3216 bacterial cytochrome ubiquinol oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HMPREF0675_3215 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HMPREF0675_4305 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF0675_4303 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF0675_4304 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF0675_4306 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF0675_4302 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF0675_4310 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF0675_4307 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF0675_4309 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF0675_3303 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D HMPREF0675_3385 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HMPREF0675_4248 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pak00680]
D HMPREF0675_3410 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF0675_3597 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0675_4794 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HMPREF0675_3688 DAK1 domain protein K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D HMPREF0675_5089 putative fructose-bisphosphate aldolase class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0675_5077 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0675_5342 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0675_3156 pfkB; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D HMPREF0675_3093 Phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HMPREF0675_3405 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_3875 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_4337 putative phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HMPREF0675_3526 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HMPREF0675_5116 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pak00910]
D HMPREF0675_3559 transporter, major facilitator family protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HMPREF0675_3557 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3556 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3554 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3095 putative nitrite reductase, copper-dependent K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D HMPREF0675_5039 hypothetical protein K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D HMPREF0675_4368 bacterial NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HMPREF0675_4580 Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF0675_3731 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3740 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_4196 class II glutamine amidotransferase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HMPREF0675_4197 pyridine nucleotide-disulfide oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HMPREF0675_3646 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:pak00920]
D HMPREF0675_4822 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF0675_4021 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HMPREF0675_4282 metW; methionine biosynthesis protein MetW K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D HMPREF0675_3564 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HMPREF0675_3563 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pak00061]
D HMPREF0675_4772 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF0675_4042 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF0675_4044 acyl transferase domain protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF0675_4043 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HMPREF0675_4041 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF0675_4872 putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0675_4671 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_5310 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pak00071]
D HMPREF0675_4671 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_5310 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_3591 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pak00561]
D HMPREF0675_5376 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF0675_4135 GroES-like protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HMPREF0675_3688 DAK1 domain protein K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D HMPREF0675_5007 dhaK; dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D HMPREF0675_5008 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D HMPREF0675_5009 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D HMPREF0675_5382 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HMPREF0675_4450 HAD hydrolase, family IIA K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D HMPREF0675_3793 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0675_5313 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0675_4406 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0675_5159 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:pak00564]
D HMPREF0675_5393 putative glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HMPREF0675_5325 glpA; glycerol-3-phosphate dehydrogenase, anaerobic, A subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HMPREF0675_5324 glpB; glycerol-3-phosphate dehydrogenase, anaerobic, B subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D HMPREF0675_5323 glpC; glycerol-3-phosphate dehydrogenase, anaerobic, C subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D HMPREF0675_3793 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0675_5313 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0675_4406 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0675_4893 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HMPREF0675_4288 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HMPREF0675_4584 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HMPREF0675_4066 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HMPREF0675_4141 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HMPREF0675_4816 phospholipase D domain protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D HMPREF0675_4142 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D HMPREF0675_5398 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D HMPREF0675_4553 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:pak00600]
D HMPREF0675_4752 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF0675_4627 nedA; exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF0675_3754 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF0675_3753 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF0675_3066 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D HMPREF0675_4089 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pak00230]
D HMPREF0675_4167 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0675_3582 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0675_5034 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF0675_5058 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HMPREF0675_4802 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HMPREF0675_5041 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D HMPREF0675_5053 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HMPREF0675_5052 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D HMPREF0675_5033 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HMPREF0675_4754 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HMPREF0675_4753 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HMPREF0675_5057 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF0675_4801 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF0675_4225 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF0675_5149 Ser/Thr phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0675_5015 putative HAD hydrolase, TIGR01457 family K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0675_4775 putative purine nucleotide phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF0675_3830 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HMPREF0675_5127 Inosine-uridine preferring nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D HMPREF0675_3306 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HMPREF0675_4824 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF0675_4825 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF0675_3888 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HMPREF0675_4723 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HMPREF0675_4821 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0675_3777 IMP dehydrogenase family protein K26110 guaB1; GMP reductase [EC:1.7.1.7]
D HMPREF0675_4252 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HMPREF0675_4085 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0675_5178 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0675_5179 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF0675_5198 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF0675_4012 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D HMPREF0675_4227 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF0675_3600 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HMPREF0675_5059 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF0675_5350 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D HMPREF0675_4924 5'-nucleotidase, C-terminal domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HMPREF0675_4889 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF0675_4140 histidine triad domain protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D HMPREF0675_3646 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pak00240]
D HMPREF0675_4059 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF0675_4058 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF0675_4056 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF0675_4057 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HMPREF0675_4061 dihydroorotate dehydrogenase 1B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HMPREF0675_4060 oxidoreductase NAD-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D HMPREF0675_3201 dihydroorotate dehydrogenase 2 K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D HMPREF0675_4063 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HMPREF0675_4062 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HMPREF0675_4586 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HMPREF0675_3888 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HMPREF0675_4761 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HMPREF0675_4439 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HMPREF0675_4273 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HMPREF0675_4778 hypothetical protein K00876 udk; uridine kinase [EC:2.7.1.48]
D HMPREF0675_5149 Ser/Thr phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0675_5015 putative HAD hydrolase, TIGR01457 family K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0675_5249 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF0675_4055 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF0675_4924 5'-nucleotidase, C-terminal domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HMPREF0675_4783 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HMPREF0675_5198 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF0675_4085 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0675_5178 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0675_5179 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF0675_5010 cytidine and deoxycytidylate deaminase zinc-binding region K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HMPREF0675_3289 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HMPREF0675_4114 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF0675_4415 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D HMPREF0675_4109 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HMPREF0675_4722 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HMPREF0675_5230 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pak00250]
D HMPREF0675_3408 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HMPREF0675_5169 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HMPREF0675_5168 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HMPREF0675_5343 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HMPREF0675_5351 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HMPREF0675_3097 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D HMPREF0675_5270 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF0675_4391 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF0675_5059 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF0675_5057 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF0675_4056 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF0675_3079 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HMPREF0675_4196 class II glutamine amidotransferase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HMPREF0675_4197 pyridine nucleotide-disulfide oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HMPREF0675_4368 bacterial NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HMPREF0675_4580 Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF0675_3686 aldehyde dehydrogenase (NAD) family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HMPREF0675_3731 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3740 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_4059 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF0675_4058 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF0675_5052 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D HMPREF0675_4853 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF0675_5034 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pak00260]
D HMPREF0675_5212 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0675_3360 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0675_4321 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF0675_4319 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HMPREF0675_4320 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF0675_3410 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF0675_5376 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF0675_3405 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_3875 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_4337 putative phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HMPREF0675_3526 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HMPREF0675_5116 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HMPREF0675_3437 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D HMPREF0675_3436 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D HMPREF0675_3297 amine oxidase (flavin-containing) K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D HMPREF0675_3810 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HMPREF0675_3812 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_3811 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D HMPREF0675_4146 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D HMPREF0675_3699 Amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D HMPREF0675_3431 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF0675_4194 putative Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HMPREF0675_4193 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pak00270]
D HMPREF0675_4822 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF0675_4021 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HMPREF0675_4255 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HMPREF0675_4156 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HMPREF0675_3830 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HMPREF0675_3488 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF0675_5212 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0675_3360 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0675_4321 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF0675_4282 metW; methionine biosynthesis protein MetW K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D HMPREF0675_4416 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0675_3945 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_3011 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_5012 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_4794 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HMPREF0675_3431 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF0675_4337 putative phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HMPREF0675_3526 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pak00280]
D HMPREF0675_4416 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0675_5145 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HMPREF0675_5144 Transketolase, pyridine binding domain protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HMPREF0675_5143 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_4759 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HMPREF0675_4772 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D HMPREF0675_4166 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D HMPREF0675_3660 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HMPREF0675_3661 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HMPREF0675_3499 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pak00290]
D HMPREF0675_4407 3-isopropylmalate dehydratase small subunit family protein K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF0675_4418 hypothetical protein K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HMPREF0675_4421 putative acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF0675_4420 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF0675_4416 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0675_3997 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pak00300]
D HMPREF0675_4321 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF0675_5212 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0675_3360 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0675_3709 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF0675_5063 dihydrodipicolinate synthetase family K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF0675_4537 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HMPREF0675_3697 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HMPREF0675_4392 argD; aminotransferase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HMPREF0675_3703 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF0675_4079 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HMPREF0675_4322 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HMPREF0675_5416 aminotransferase, class I/II K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D HMPREF0675_3821 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF0675_3822 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pak00310]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_3079 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HMPREF0675_5353 oxidoreductase, NAD-binding domain protein K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
C 00220 Arginine biosynthesis [PATH:pak00220]
D HMPREF0675_3645 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HMPREF0675_5270 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF0675_4391 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF0675_3644 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D HMPREF0675_5052 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D HMPREF0675_3731 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3740 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_4368 bacterial NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HMPREF0675_4580 Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF0675_3646 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HMPREF0675_4394 ArgJ family K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D HMPREF0675_4393 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D HMPREF0675_4395 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D HMPREF0675_4392 argD; aminotransferase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:pak00330]
D HMPREF0675_3699 Amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D HMPREF0675_3297 amine oxidase (flavin-containing) K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D HMPREF0675_5120 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HMPREF0675_3361 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HMPREF0675_3358 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D HMPREF0675_3686 aldehyde dehydrogenase (NAD) family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HMPREF0675_3898 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF0675_3899 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HMPREF0675_3989 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D HMPREF0675_5353 oxidoreductase, NAD-binding domain protein K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
C 00340 Histidine metabolism [PATH:pak00340]
D HMPREF0675_4470 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HMPREF0675_4471 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D HMPREF0675_4188 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D HMPREF0675_4217 bifunctional HisA/TrpF protein K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D HMPREF0675_4216 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HMPREF0675_4424 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HMPREF0675_4215 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D HMPREF0675_3035 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_4214 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_4336 hisN; histidinol-phosphate phosphatase HisN K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D HMPREF0675_4213 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D HMPREF0675_5233 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D HMPREF0675_5229 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D HMPREF0675_5232 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D HMPREF0675_3297 amine oxidase (flavin-containing) K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:pak00350]
D HMPREF0675_3035 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_4214 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_3297 amine oxidase (flavin-containing) K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D HMPREF0675_3591 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF0675_3079 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HMPREF0675_3873 mycothiol-dependent maleylpyruvate isomerase K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
C 00360 Phenylalanine metabolism [PATH:pak00360]
D HMPREF0675_3297 amine oxidase (flavin-containing) K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D HMPREF0675_3035 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_4214 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_5120 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HMPREF0675_4609 pyridine nucleotide-disulfide oxidoreductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
D HMPREF0675_4614 rieske [2Fe-2S] domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:pak00380]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_4128 putative tryptophan 2,3-dioxygenase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D HMPREF0675_3297 amine oxidase (flavin-containing) K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D HMPREF0675_5120 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HMPREF0675_3100 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pak00400]
D HMPREF0675_3795 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF0675_4245 putative 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HMPREF0675_4736 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HMPREF0675_4244 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HMPREF0675_4333 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HMPREF0675_4243 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HMPREF0675_4217 bifunctional HisA/TrpF protein K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D HMPREF0675_4192 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D HMPREF0675_4194 putative Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HMPREF0675_4193 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HMPREF0675_4823 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D HMPREF0675_4272 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HMPREF0675_3035 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_4214 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pak00410]
D HMPREF0675_5230 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HMPREF0675_3499 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pak00430]
D HMPREF0675_5343 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HMPREF0675_5351 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HMPREF0675_4368 bacterial NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pak00450]
D HMPREF0675_4612 sufS; cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HMPREF0675_5387 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HMPREF0675_4781 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pak00460]
D HMPREF0675_3408 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HMPREF0675_5169 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HMPREF0675_5168 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HMPREF0675_3410 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pak00470]
D HMPREF0675_5362 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0675_5417 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0675_4405 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0675_5052 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D HMPREF0675_4725 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF0675_3824 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF0675_4079 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HMPREF0675_4322 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HMPREF0675_5353 oxidoreductase, NAD-binding domain protein K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
D HMPREF0675_5359 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D HMPREF0675_5357 B12 binding domain protein K17898 oraE; D-ornithine 4,5-aminomutase subunit beta [EC:5.4.3.5]
D HMPREF0675_5356 hypothetical protein K17899 oraS; D-ornithine 4,5-aminomutase subunit alpha [EC:5.4.3.5]
C 00480 Glutathione metabolism [PATH:pak00480]
D HMPREF0675_3328 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D HMPREF0675_3763 cytosol aminopeptidase family, catalytic domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HMPREF0675_4665 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF0675_5043 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF0675_4792 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HMPREF0675_4667 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF0675_4630 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:pak00515]
D HMPREF0675_3573 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:pak00514]
D HMPREF0675_3573 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pak00511]
D HMPREF0675_4627 nedA; exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF0675_3754 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF0675_3753 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF0675_4752 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF0675_3066 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0675_4516 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF0675_3062 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF0675_4092 glycoside hydrolase, family 2 K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D HMPREF0675_3672 hypothetical protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF0675_3092 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:pak00542]
D HMPREF0675_4313 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pak00541]
D HMPREF0675_3534 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0675_3069 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0675_3654 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF0675_5365 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF0675_3007 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0675_3489 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0675_4776 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HMPREF0675_4747 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HMPREF0675_3581 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF0675_3162 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HMPREF0675_3147 bacterial transferase hexapeptide repeat protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:pak00550]
D HMPREF0675_4289 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0675_4947 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0675_3827 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF0675_3824 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF0675_3821 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF0675_5417 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0675_4405 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0675_3822 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF0675_5297 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0675_3823 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0675_3826 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF0675_3820 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF0675_3226 penicillin-binding protein, transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D HMPREF0675_3304 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF0675_4199 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D HMPREF0675_4698 Mur ligase middle domain protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF0675_4699 CobB/CobQ-like protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:pak00552]
D HMPREF0675_5297 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0675_4313 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF0675_5260 cell envelope-like function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pak00543]
D HMPREF0675_3143 glycosyltransferase, group 1 family protein K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
D HMPREF0675_4313 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF0675_4822 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF0675_4750 glycosyltransferase, group 2 family protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pak00730]
D HMPREF0675_3113 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HMPREF0675_4178 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0675_3569 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D HMPREF0675_4122 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HMPREF0675_3567 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D HMPREF0675_3943 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF0675_3116 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HMPREF0675_3944 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HMPREF0675_4403 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D HMPREF0675_4334 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HMPREF0675_4889 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF0675_4574 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:pak00740]
D HMPREF0675_4804 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HMPREF0675_4806 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HMPREF0675_4803 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HMPREF0675_4805 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HMPREF0675_3064 HAD hydrolase, family IA, variant 3 K20884 FHY; riboflavin kinase / FMN hydrolase [EC:2.7.1.26 3.1.3.102]
D HMPREF0675_4540 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HMPREF0675_3943 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:pak00750]
D HMPREF0675_4766 phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HMPREF0675_3614 oxidoreductase, aldo/keto reductase family protein K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D HMPREF0675_3526 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HMPREF0675_4320 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF0675_4023 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D HMPREF0675_4024 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pak00760]
D HMPREF0675_4731 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HMPREF0675_4775 putative purine nucleotide phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF0675_5149 Ser/Thr phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0675_5015 putative HAD hydrolase, TIGR01457 family K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0675_3901 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HMPREF0675_4358 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D HMPREF0675_5341 nadE; NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D HMPREF0675_4067 competence/damage-inducible domain protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D HMPREF0675_4053 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D HMPREF0675_5236 transcriptional regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HMPREF0675_4444 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D HMPREF0675_3692 pntA; NAD(P)(+) transhydrogenase (AB-specific), alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HMPREF0675_3693 NAD(P) transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D HMPREF0675_3079 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pak00770]
D HMPREF0675_4421 putative acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF0675_4420 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF0675_4045 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HMPREF0675_4857 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D HMPREF0675_4254 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HMPREF0675_4529 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HMPREF0675_3856 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HMPREF0675_4852 putative holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HMPREF0675_4416 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0675_5230 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:pak00780]
D HMPREF0675_4041 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF0675_4872 putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0675_4919 6-carboxyhexanoate--CoA ligase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HMPREF0675_4025 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HMPREF0675_4026 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HMPREF0675_4461 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D HMPREF0675_4757 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pak00785]
D HMPREF0675_3761 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D HMPREF0675_3758 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_4049 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HMPREF0675_3762 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HMPREF0675_4325 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D HMPREF0675_5145 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HMPREF0675_5144 Transketolase, pyridine binding domain protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HMPREF0675_5143 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HMPREF0675_3810 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HMPREF0675_3812 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HMPREF0675_3811 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D HMPREF0675_4146 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pak00790]
D HMPREF0675_3308 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HMPREF0675_3318 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D HMPREF0675_3319 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HMPREF0675_3317 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HMPREF0675_4721 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF0675_3886 folC; bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HMPREF0675_4804 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HMPREF0675_5040 pabB; aminodeoxychorismate synthase, component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D HMPREF0675_5336 aminotransferase, class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D HMPREF0675_3550 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HMPREF0675_3545 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HMPREF0675_3547 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HMPREF0675_3540 MoeA N-terminal region (domain I and II) K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HMPREF0675_3546 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:pak00670]
D HMPREF0675_4721 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF0675_3049 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF0675_4797 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF0675_3410 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF0675_4802 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HMPREF0675_4801 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF0675_4257 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF0675_3812 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HMPREF0675_4722 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HMPREF0675_4793 putative formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HMPREF0675_3539 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pak00860]
D HMPREF0675_4432 putative glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_3350 glutamyl-tRNAGlu reductase domain protein K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D HMPREF0675_3344 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HMPREF0675_3345 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HMPREF0675_3347 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D HMPREF0675_3346 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D HMPREF0675_3349 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D HMPREF0675_3348 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D HMPREF0675_5146 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D HMPREF0675_3351 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D HMPREF0675_3364 hemD; uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D HMPREF0675_3473 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HMPREF0675_5147 radical SAM protein, BA_1875 family K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D HMPREF0675_4628 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HMPREF0675_4626 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HMPREF0675_3716 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HMPREF0675_3456 cbiX; sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D HMPREF0675_3453 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D HMPREF0675_3455 cobJ; precorrin-3B C(17)-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D HMPREF0675_3454 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D HMPREF0675_4977 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D HMPREF0675_3474 precorrin-6x reductase CbiJ/CobK K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D HMPREF0675_3470 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D HMPREF0675_3464 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D HMPREF0675_3472 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D HMPREF0675_3105 putative cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D HMPREF0675_3861 CobN/magnesium chelatase domain protein K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D HMPREF0675_4300 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HMPREF0675_3471 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HMPREF0675_3452 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D HMPREF0675_3451 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HMPREF0675_3476 cobS; cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D HMPREF0675_4010 bluB; cob(II)yrinic acid a,c-diamide reductase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D HMPREF0675_3475 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D HMPREF0675_3104 cobaltochelatase subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D HMPREF0675_3859 von Willebrand factor type A domain protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D HMPREF0675_3103 magnesium chelatase, subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D HMPREF0675_3858 magnesium chelatase, subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D HMPREF0675_5413 glycosyl hydrolase family 2, TIM barrel domain protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pak00130]
D HMPREF0675_4999 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D HMPREF0675_3961 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D HMPREF0675_4996 chorismate binding enzyme K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D HMPREF0675_3960 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D HMPREF0675_3959 putative o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D HMPREF0675_3963 menE; O-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D HMPREF0675_3964 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D HMPREF0675_5005 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pak00900]
D HMPREF0675_4122 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HMPREF0675_4577 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HMPREF0675_3395 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D HMPREF0675_3577 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HMPREF0675_4573 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HMPREF0675_3632 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D HMPREF0675_5171 idi; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D HMPREF0675_3801 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF0675_3624 putative di-trans,poly-cis-decaprenylcistransferase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HMPREF0675_5396 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D HMPREF0675_5365 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D HMPREF0675_3961 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D HMPREF0675_4996 chorismate binding enzyme K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HMPREF0675_3301 acetyl xylan esterase (AXE1) K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:pak00332]
D HMPREF0675_3898 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF0675_3899 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pak00261]
D HMPREF0675_5212 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0675_3360 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0675_3709 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF0675_5063 dihydrodipicolinate synthetase family K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF0675_4537 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pak00521]
D HMPREF0675_3791 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0675_4167 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0675_3511 idhA; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HMPREF0675_5365 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HMPREF0675_3791 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D HMPREF0675_5365 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:pak00401]
D HMPREF0675_4272 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HMPREF0675_3035 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_4214 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D HMPREF0675_4044 acyl transferase domain protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF0675_4872 putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HMPREF0675_4042 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D HMPREF0675_4255 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D HMPREF0675_5359 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D HMPREF0675_5120 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pak00625]
D HMPREF0675_3591 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:pak00643]
D HMPREF0675_5120 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pak00626]
D HMPREF0675_3591 GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pak03020]
D HMPREF0675_4938 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0675_4937 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0675_4881 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0675_4253 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D HMPREF0675_3515 helicase C-terminal domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pak03010]
D HMPREF0675_3847 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF0675_4588 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF0675_4910 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF0675_4882 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF0675_4899 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF0675_5304 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF0675_4932 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF0675_4902 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF0675_4860 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF0675_4917 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF0675_4883 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF0675_4933 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF0675_4884 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF0675_4903 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF0675_5225 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF0675_4539 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF0675_4496 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF0675_4907 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF0675_5302 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF0675_4912 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF0675_3956 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF0675_4941 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF0675_4913 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF0675_4916 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF0675_4915 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF0675_4904 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF0675_4901 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF0675_4939 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF0675_5301 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF0675_4940 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF0675_4942 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF0675_4861 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF0675_4906 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF0675_4897 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF0675_4909 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF0675_4880 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF0675_4900 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF0675_4489 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF0675_4465 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF0675_3892 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF0675_4911 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF0675_4914 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF0675_4905 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF0675_3586 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D HMPREF0675_3893 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF0675_4533 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF0675_5223 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF0675_4908 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF0675_4898 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF0675_4317 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF0675_5222 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF0675_4509 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF0675_5226 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF0675_4950 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF0675_5224 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF0675_5432 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF0675_4466 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF0675_5184 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF0675_4886 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF0675_3607 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_4693 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_4456 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_3609 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0675_4692 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0675_4455 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0675_3611 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0675_4453 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0675_4690 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pak00970]
D HMPREF0675_3134 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0675_3904 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0675_3543 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0675_4323 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0675_3532 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0675_5257 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0675_4681 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0675_4017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF0675_5026 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF0675_4132 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF0675_4412 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0675_3580 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0675_5025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0675_4411 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0675_4133 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0675_4644 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0675_5122 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0675_4684 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF0675_3018 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF0675_4708 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_4478 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_5203 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_3840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_3601 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_5022 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0675_4700 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0675_4030 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0675_4343 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0675_4951 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0675_5027 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF0675_5215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0675_4275 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0675_4654 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0675_5245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0675_5259 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0675_5266 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0675_3244 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0675_4952 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0675_3296 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0675_3478 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0675_4945 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF0675_4953 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF0675_4134 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0675_4131 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0675_4400 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0675_4432 putative glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4185 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF0675_4186 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF0675_4184 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF0675_4923 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HMPREF0675_4239 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0675_4236 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0675_4005 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF0675_4139 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0675_5291 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0675_3419 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0675_4781 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0675_4257 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF0675_4635 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0675_3951 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0675_3261 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0675_3222 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0675_4656 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0675_5188 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0675_4566 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0675_4230 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0675_4463 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0675_4462 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0675_4458 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0675_4366 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pak03060]
D HMPREF0675_4890 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0675_4944 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0675_3884 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0675_4223 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HMPREF0675_4224 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HMPREF0675_4222 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0675_5429 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0675_4372 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0675_4498 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0675_3246 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF0675_4500 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0675_4428 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HMPREF0675_3710 putative twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D HMPREF0675_4427 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D HMPREF0675_4488 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0675_3835 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pak04122]
D HMPREF0675_4178 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0675_4179 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HMPREF0675_3547 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HMPREF0675_3550 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HMPREF0675_3548 ThiS family protein K03636 moaD; sulfur-carrier protein
D HMPREF0675_3566 molybdopterin biosynthesis-like protein MoeZ K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D HMPREF0675_3545 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HMPREF0675_3568 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome [PATH:pak03050]
D HMPREF0675_4270 prcA; proteasome, alpha subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D HMPREF0675_4269 prcB; proteasome, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:pak03018]
D HMPREF0675_3891 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF0675_3597 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0675_4538 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF0675_3980 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HMPREF0675_4318 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HMPREF0675_4073 YmdA/YtgF family protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HMPREF0675_4534 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF0675_5342 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0675_5105 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0675_3491 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_4829 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_3385 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HMPREF0675_4248 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D HMPREF0675_5378 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pak03030]
D HMPREF0675_3789 GIY-YIG catalytic domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_4780 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_4211 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0675_3248 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0675_3290 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0675_3955 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0675_3001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0675_5319 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF0675_4014 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF0675_5303 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4677 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4782 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HMPREF0675_4487 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF0675_3843 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0675_4663 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pak03410]
D HMPREF0675_3270 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF0675_3617 putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF0675_3343 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HMPREF0675_5322 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D HMPREF0675_4507 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF0675_4659 putative DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF0675_4299 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF0675_4954 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF0675_5311 apurinic endonuclease (APN1) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HMPREF0675_3843 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0675_4663 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pak03420]
D HMPREF0675_3593 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0675_3872 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF0675_3869 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF0675_3877 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF0675_4354 HRDC domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_4359 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_4812 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_3843 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0675_4663 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF0675_3515 helicase C-terminal domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:pak03430]
D HMPREF0675_4354 HRDC domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_4359 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_4812 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_3629 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF0675_3628 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF0675_5303 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4677 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4211 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0675_3001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0675_3248 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0675_3955 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0675_3290 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0675_3789 GIY-YIG catalytic domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_4780 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_4663 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pak03440]
D HMPREF0675_5303 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4677 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_3003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF0675_4000 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF0675_3250 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF0675_4071 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF0675_3843 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0675_4220 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF0675_4221 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF0675_4219 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HMPREF0675_4532 putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF0675_4356 putative exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HMPREF0675_4355 putative exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HMPREF0675_4357 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HMPREF0675_4211 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0675_3001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0675_3248 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0675_3955 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0675_3290 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0675_3789 GIY-YIG catalytic domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_4780 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_4256 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pak03250]
D HMPREF0675_3788 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pak02010]
D HMPREF0675_3552 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HMPREF0675_3553 NifC-like protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HMPREF0675_4541 ABC transporter, substrate-binding protein, QAT family K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HMPREF0675_5083 ABC transporter, substrate-binding protein, QAT family K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HMPREF0675_4542 ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D HMPREF0675_4543 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D HMPREF0675_3438 ABC transporter, substrate-binding protein, QAT family K05845 opuC; osmoprotectant transport system substrate-binding protein
D HMPREF0675_3439 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D HMPREF0675_3440 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D HMPREF0675_3441 ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HMPREF0675_3430 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF0675_4618 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF0675_4620 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0675_4621 putative type IV conjugative transfer system protein TraL K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0675_4701 ABC transporter, solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D HMPREF0675_4705 ABC transporter, permease protein K10238 thuG; trehalose/maltose transport system permease protein
D HMPREF0675_3087 carbohydrate ABC transporter, carbohydrate-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D HMPREF0675_3088 ABC transporter, permease protein K10201 ngcF; N-acetylglucosamine transport system permease protein
D HMPREF0675_3089 ABC transporter, permease protein K10202 ngcG; N-acetylglucosamine transport system permease protein
D HMPREF0675_3059 ABC transporter, solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D HMPREF0675_3058 ABC transporter, permease protein K10241 cebF; cellobiose transport system permease protein
D HMPREF0675_3057 ABC transporter, permease protein K10242 cebG; cellobiose transport system permease protein
D HMPREF0675_3669 ABC transporter, solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D HMPREF0675_4511 ABC transporter, solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D HMPREF0675_3670 hypothetical protein K17245 chiF; putative chitobiose transport system permease protein
D HMPREF0675_4512 ABC transporter, permease protein K17245 chiF; putative chitobiose transport system permease protein
D HMPREF0675_3671 ABC transporter, permease protein K17246 chiG; putative chitobiose transport system permease protein
D HMPREF0675_4513 ABC transporter, permease protein K17246 chiG; putative chitobiose transport system permease protein
D HMPREF0675_4788 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF0675_4785 branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF0675_4784 branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HMPREF0675_4787 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF0675_5030 ABC transporter, solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D HMPREF0675_5029 ABC transporter, permease protein K17316 gtsB; glucose/mannose transport system permease protein
D HMPREF0675_5028 ABC transporter, permease protein K17317 gtsC; glucose/mannose transport system permease protein
D HMPREF0675_3015 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF0675_3014 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF0675_3013 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF0675_3017 RbsD/FucU transport family protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D HMPREF0675_3383 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0675_3382 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF0675_3381 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF0675_3380 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF0675_4813 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF0675_4815 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF0675_4814 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF0675_5217 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0675_5218 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF0675_5219 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF0675_5220 ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF0675_5221 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF0675_4894 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D HMPREF0675_3466 cbiN; cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D HMPREF0675_3465 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D HMPREF0675_3467 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D HMPREF0675_3468 cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HMPREF0675_4449 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D HMPREF0675_4447 cobalt transport protein K16783 bioN; biotin transport system permease protein
D HMPREF0675_4448 ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D HMPREF0675_4869 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0675_4397 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF0675_4398 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0675_5134 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0675_5133 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0675_3219 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0675_3218 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0675_3213 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HMPREF0675_3214 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HMPREF0675_3127 ABC transporter, ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pak02060]
D HMPREF0675_3393 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HMPREF0675_3154 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF0675_3394 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF0675_4552 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF0675_3339 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3749 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3340 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HMPREF0675_3744 phosphotransferase system, EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HMPREF0675_4203 phosphotransferase system, EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF0675_4171 phosphotransferase system, EIIB K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D HMPREF0675_3978 cmtA; EIICB-Mtl K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D HMPREF0675_4209 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0675_4207 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0675_4208 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0675_4551 srlB; PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HMPREF0675_3396 PTS system glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HMPREF0675_4550 putative ATP synthase F0, A subunit K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D HMPREF0675_4549 srlA; PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D HMPREF0675_3020 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D HMPREF0675_3406 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D HMPREF0675_3023 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3397 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3407 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3022 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D HMPREF0675_3483 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF0675_3482 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF0675_3155 putative ATP synthase F0, A subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF0675_5307 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:pak03070]
D HMPREF0675_4223 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HMPREF0675_4224 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HMPREF0675_4944 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0675_3884 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0675_4890 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0675_4222 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0675_5429 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0675_4372 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0675_4500 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0675_4498 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0675_4428 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HMPREF0675_3710 putative twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D HMPREF0675_4427 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pak02020]
D HMPREF0675_3401 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF0675_3400 response regulator receiver domain protein K07776 regX3; two-component system, OmpR family, response regulator RegX3
D HMPREF0675_3383 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0675_3123 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HMPREF0675_3124 response regulator receiver domain protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HMPREF0675_3120 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D HMPREF0675_3121 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D HMPREF0675_3122 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D HMPREF0675_4626 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HMPREF0675_3716 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HMPREF0675_5167 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D HMPREF0675_5166 response regulator receiver domain protein K07669 mprA; two-component system, OmpR family, response regulator MprA
D HMPREF0675_5385 trypsin K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D HMPREF0675_4376 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D HMPREF0675_4377 response regulator receiver domain protein K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D HMPREF0675_3000 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0675_4976 HpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D HMPREF0675_3946 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HMPREF0675_3355 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HMPREF0675_3557 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3556 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3554 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3555 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D HMPREF0675_3448 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF0675_3449 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR
D HMPREF0675_3277 helicase/secretion neighborhood ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF0675_3041 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF0675_3278 hypothetical protein K12510 tadB; tight adherence protein B
D HMPREF0675_3043 bacterial type II secretion system domain protein F K12511 tadC; tight adherence protein C
D HMPREF0675_3731 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3740 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3269 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF0675_3216 bacterial cytochrome ubiquinol oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HMPREF0675_3215 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HMPREF0675_5164 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D HMPREF0675_3162 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pak02024]
D HMPREF0675_3488 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF0675_3795 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF0675_3124 response regulator receiver domain protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HMPREF0675_3217 Tat pathway signal sequence domain protein K20265 gadC; glutamate:GABA antiporter
D HMPREF0675_4671 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_5310 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_3269 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF0675_4806 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HMPREF0675_5217 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0675_5218 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF0675_5219 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF0675_5220 ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF0675_5221 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF0675_4342 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0675_4525 Tat pathway signal sequence domain protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0675_4519 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0675_4341 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0675_4522 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0675_4340 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0675_4523 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0675_4339 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0675_4338 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0675_4524 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0675_5429 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0675_3663 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-]
D HMPREF0675_4944 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0675_3884 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0675_4890 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0675_4222 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0675_4372 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0675_4500 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0675_4498 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D HMPREF0675_3015 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D HMPREF0675_4091 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HMPREF0675_3597 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pak04980]
D HMPREF0675_4300 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HMPREF0675_3662 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D HMPREF0675_3660 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HMPREF0675_3661 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pak01501]
D HMPREF0675_5228 glycosyl hydrolase family 3 N-terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF0675_4687 glycosyl hydrolase family 3 N-terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF0675_5217 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0675_5218 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF0675_5219 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF0675_5220 ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF0675_5221 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF0675_3820 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pak01502]
D HMPREF0675_5417 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0675_4405 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0675_5362 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0675_3822 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF0675_3823 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0675_3826 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D HMPREF0675_3788 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pak01000]
C 01001 Protein kinases [BR:pak01001]
D HMPREF0675_3225 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF0675_3798 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF0675_5380 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF0675_4686 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF0675_3401 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF0675_3123 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HMPREF0675_5167 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D HMPREF0675_4376 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D HMPREF0675_3448 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF0675_4329 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pak01009]
D HMPREF0675_5342 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0675_3228 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D HMPREF0675_4361 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D HMPREF0675_5116 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pak01002]
D HMPREF0675_3835 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HMPREF0675_4821 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0675_3790 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF0675_5023 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF0675_5034 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF0675_4196 class II glutamine amidotransferase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HMPREF0675_4853 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF0675_5216 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D HMPREF0675_3512 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0675_4413 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0675_4665 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF0675_5043 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF0675_4967 peptidase family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D HMPREF0675_3135 peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HMPREF0675_3136 peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HMPREF0675_3763 cytosol aminopeptidase family, catalytic domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HMPREF0675_3703 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF0675_3730 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HMPREF0675_4888 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HMPREF0675_3717 aminopeptidase P domain protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HMPREF0675_3307 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF0675_4680 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D HMPREF0675_5385 trypsin K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D HMPREF0675_3663 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-]
D HMPREF0675_4199 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D HMPREF0675_3304 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF0675_4639 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF0675_4640 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF0675_4349 Lon protease (S16) C-terminal proteolytic domain protein K07177 K07177; Lon-like protease
D HMPREF0675_4082 lexA; LexA DNA binding domain protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D HMPREF0675_4488 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0675_3989 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D HMPREF0675_4637 WD40-like protein K08676 tri; tricorn protease [EC:3.4.21.-]
D HMPREF0675_4756 peptidase family S51 K05995 pepE; dipeptidase E [EC:3.4.13.21]
D HMPREF0675_4270 prcA; proteasome, alpha subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D HMPREF0675_4269 prcB; proteasome, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D HMPREF0675_5169 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HMPREF0675_5168 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
C 01003 Glycosyltransferases [BR:pak01003]
D HMPREF0675_4286 glycosyltransferase, group 2 family protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D HMPREF0675_3573 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D HMPREF0675_4879 glycosyltransferase, group 1 family protein K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D HMPREF0675_4850 glycosyltransferase, group 1 family protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D HMPREF0675_3706 glgA; glycogen synthase, Corynebacterium family K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D HMPREF0675_4313 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF0675_5433 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D HMPREF0675_4750 glycosyltransferase, group 2 family protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D HMPREF0675_4019 putative alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D HMPREF0675_3143 glycosyltransferase, group 1 family protein K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pak01005]
D HMPREF0675_4313 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pak01011]
D HMPREF0675_4289 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0675_4947 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0675_3827 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF0675_3824 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF0675_3821 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF0675_5417 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0675_4405 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0675_5362 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0675_4725 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF0675_3823 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0675_3826 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF0675_5297 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0675_5211 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HMPREF0675_3820 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF0675_3226 penicillin-binding protein, transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D HMPREF0675_3304 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF0675_4199 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D HMPREF0675_3790 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF0675_5023 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF0675_4241 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HMPREF0675_5239 SH3 domain protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:pak01004]
D HMPREF0675_4044 acyl transferase domain protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF0675_4043 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HMPREF0675_4041 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF0675_4872 putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0675_4089 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HMPREF0675_4599 enoyl-(acyl carrier protein) reductase K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D HMPREF0675_4671 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_5310 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_3793 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0675_5313 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0675_4406 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pak01006]
D HMPREF0675_3801 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF0675_3624 putative di-trans,poly-cis-decaprenylcistransferase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D HMPREF0675_4078 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF0675_5005 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D HMPREF0675_4628 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pak01007]
D HMPREF0675_4432 putative glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4923 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HMPREF0675_4458 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0675_4366 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF0675_3419 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0675_5188 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0675_4781 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0675_3261 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0675_4635 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0675_3951 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0675_3222 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0675_4656 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0675_4236 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0675_4230 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0675_4005 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF0675_5291 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0675_4566 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0675_4139 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0675_4239 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0675_4463 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0675_4462 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0675_3035 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_4214 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF0675_3437 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D HMPREF0675_4919 6-carboxyhexanoate--CoA ligase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HMPREF0675_4392 argD; aminotransferase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HMPREF0675_4025 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HMPREF0675_3344 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HMPREF0675_4416 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0675_3526 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pak00194]
D HMPREF0675_4302 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF0675_4303 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF0675_4304 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF0675_4305 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF0675_4306 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF0675_4307 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF0675_4309 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF0675_4310 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pak03000]
D HMPREF0675_5056 LysR substrate binding domain protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D HMPREF0675_4069 transcriptional regulator, DeoR family K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D HMPREF0675_3158 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D HMPREF0675_3012 sugar-binding domain protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF0675_5410 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF0675_4622 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D HMPREF0675_3746 putative histidine utilization repressor K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D HMPREF0675_3205 FCD domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HMPREF0675_5061 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HMPREF0675_4022 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D HMPREF0675_4460 transcriptional regulator, TetR family K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D HMPREF0675_4284 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HMPREF0675_3639 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D HMPREF0675_5102 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D HMPREF0675_4004 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HMPREF0675_3269 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF0675_4068 DNA-binding helix-turn-helix protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D HMPREF0675_4674 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D HMPREF0675_3528 iron dependent repressor DNA binding domain protein K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D HMPREF0675_4757 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HMPREF0675_3686 aldehyde dehydrogenase (NAD) family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HMPREF0675_3338 PRD domain protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D HMPREF0675_3025 HTH domain protein K03491 licR; probable licABCH operon transcriptional regulator
D HMPREF0675_4547 HTH domain protein K03491 licR; probable licABCH operon transcriptional regulator
D HMPREF0675_4744 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D HMPREF0675_4328 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D HMPREF0675_5318 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HMPREF0675_5420 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF0675_3398 CarD-like protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D HMPREF0675_4459 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF0675_3973 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HMPREF0675_4574 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HMPREF0675_4819 PspC domain protein K03973 pspC; phage shock protein C
D HMPREF0675_5384 putative sugar-binding domain protein K05346 deoR; deoxyribonucleoside regulator
D HMPREF0675_4281 putative sugar-binding domain protein K05346 deoR; deoxyribonucleoside regulator
D HMPREF0675_4055 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF0675_4378 putative ACR, COG1678 K07735 algH; putative transcriptional regulator
D HMPREF0675_3834 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D HMPREF0675_4084 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D HMPREF0675_3817 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pak03021]
D HMPREF0675_3515 helicase C-terminal domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D HMPREF0675_4881 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0675_4938 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0675_4937 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0675_4253 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF0675_4091 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HMPREF0675_4331 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HMPREF0675_4561 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF0675_4250 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF0675_4943 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF0675_3834 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D HMPREF0675_3621 prokaryotic transcription elongation factor, GreA/GreB domain protein K03624 greA; transcription elongation factor GreA
D HMPREF0675_4318 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pak03019]
D HMPREF0675_3891 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF0675_4508 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0675_4534 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF0675_4073 YmdA/YtgF family protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HMPREF0675_3799 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D HMPREF0675_4683 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HMPREF0675_3980 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HMPREF0675_3597 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0675_4538 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF0675_4318 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HMPREF0675_5342 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0675_5105 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0675_3491 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_4829 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_3385 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HMPREF0675_4248 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D HMPREF0675_5378 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D HMPREF0675_3878 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D HMPREF0675_4425 DSHCT (NUC185) domain protein K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D HMPREF0675_4088 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D HMPREF0675_3168 helicase C-terminal domain protein K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pak03011]
D HMPREF0675_3847 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF0675_4588 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF0675_4910 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF0675_4882 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF0675_4899 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF0675_5304 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF0675_4932 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF0675_4902 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF0675_4860 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF0675_4917 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF0675_4883 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF0675_4933 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF0675_4884 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF0675_4903 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF0675_5225 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF0675_4539 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF0675_4496 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF0675_4907 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF0675_5302 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF0675_4912 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF0675_3956 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF0675_4941 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF0675_4913 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF0675_4916 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF0675_4915 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF0675_4904 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF0675_4901 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF0675_5301 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF0675_4940 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF0675_4942 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF0675_4939 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF0675_4861 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF0675_4906 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF0675_4897 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF0675_4909 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF0675_4880 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF0675_4900 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF0675_4489 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF0675_4465 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF0675_3892 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF0675_4911 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF0675_4914 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF0675_4905 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF0675_3893 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF0675_4533 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF0675_5223 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF0675_4908 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF0675_4898 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF0675_4317 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF0675_5222 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF0675_4509 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF0675_5226 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF0675_4950 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF0675_5224 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF0675_5432 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF0675_4466 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF0675_5184 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF0675_4886 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF0675_3586 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D HMPREF0675_3611 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0675_4453 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0675_4690 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0675_3607 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_4693 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_4456 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_3609 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0675_4692 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0675_4455 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pak03009]
D HMPREF0675_4508 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0675_4683 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HMPREF0675_3995 era; ribosome biogenesis GTPase Era K03595 era; GTPase
D HMPREF0675_3897 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D HMPREF0675_3834 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D HMPREF0675_4561 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF0675_4250 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF0675_4943 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF0675_3576 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HMPREF0675_4258 putative ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HMPREF0675_5115 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HMPREF0675_4868 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HMPREF0675_4530 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HMPREF0675_3975 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HMPREF0675_5423 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF0675_3818 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HMPREF0675_3574 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HMPREF0675_4445 rrmJ; ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HMPREF0675_4604 methyltransferase domain protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D HMPREF0675_3418 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HMPREF0675_4581 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HMPREF0675_5388 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HMPREF0675_4434 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HMPREF0675_3836 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF0675_4840 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HMPREF0675_3541 acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D HMPREF0675_4494 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D HMPREF0675_4065 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D HMPREF0675_3891 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF0675_4240 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HMPREF0675_4334 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HMPREF0675_4274 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D HMPREF0675_4080 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D HMPREF0675_4314 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF0675_4227 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF0675_4554 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D HMPREF0675_4562 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D HMPREF0675_3664 S4 domain protein K14761 rlbA; ribosome-associated protein
D HMPREF0675_3902 iojap-like protein K09710 ybeB; ribosome-associated protein
D HMPREF0675_3993 ybeY; translation metalloprotein YbeY K07042 ybeY; probable rRNA maturation factor
D HMPREF0675_3635 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D HMPREF0675_4510 putative ACR, COG1399 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pak03016]
D HMPREF0675_3799 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D HMPREF0675_4432 putative glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4566 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0675_3261 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0675_3951 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0675_4781 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0675_4923 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HMPREF0675_5188 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0675_3222 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0675_4656 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0675_4236 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0675_4239 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0675_4005 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF0675_4139 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0675_5291 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0675_3419 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0675_4635 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0675_4230 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0675_4463 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0675_4462 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0675_4458 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0675_4366 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF0675_3388 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HMPREF0675_4423 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF0675_4264 HAD hydrolase, family IA, variant 3 K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D HMPREF0675_4866 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HMPREF0675_4867 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HMPREF0675_4544 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HMPREF0675_4178 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0675_4314 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF0675_4078 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF0675_5431 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HMPREF0675_3719 rnpB; bacterial RNase P class A K01978 rnpB; M1 RNA
D HMPREF0675_4724 rph; tRNA nucleotidyltransferase K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HMPREF0675_4123 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HMPREF0675_5337 YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HMPREF0675_5247 cytidine and deoxycytidylate deaminase zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HMPREF0675_4076 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HMPREF0675_4493 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HMPREF0675_4464 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D HMPREF0675_5388 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HMPREF0675_4179 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HMPREF0675_3390 glycine cleavage T-protein C-terminal barrel domain protein K06980 ygfZ; tRNA-modifying protein YgfZ
D HMPREF0675_3983 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HMPREF0675_3305 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HMPREF0675_4841 yeaZ; universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HMPREF0675_4839 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HMPREF0675_4842 hydrolase, P-loop family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HMPREF0675_4538 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pak03012]
D HMPREF0675_4559 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF0675_4467 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF0675_4587 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF0675_4927 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0675_4931 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF0675_4316 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HMPREF0675_4585 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HMPREF0675_4315 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HMPREF0675_3587 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HMPREF0675_4887 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HMPREF0675_4249 efp; translation elongation factor P K02356 efp; elongation factor P
D HMPREF0675_4399 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HMPREF0675_4295 peptidyl-tRNA hydrolase domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pak03110]
D HMPREF0675_5086 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HMPREF0675_3324 ATPase family associated with various cellular activities (AAA) K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HMPREF0675_4638 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HMPREF0675_5105 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0675_3491 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_4829 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_3974 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF0675_5103 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF0675_5104 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF0675_3806 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D HMPREF0675_3245 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D HMPREF0675_4830 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF0675_3307 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF0675_4310 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF0675_3544 cytoplasmic chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D HMPREF0675_3663 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-]
D HMPREF0675_3066 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0675_3788 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF0675_4162 hypothetical protein K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HMPREF0675_5392 trxA; thioredoxin K03671 TXN; thioredoxin
D HMPREF0675_3530 trxA; thioredoxin K03671 TXN; thioredoxin
D HMPREF0675_4168 thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:pak04131]
D HMPREF0675_3888 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HMPREF0675_4516 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF0675_3062 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF0675_5089 putative fructose-bisphosphate aldolase class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0675_3881 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0675_3405 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_3875 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_3837 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0675_4103 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:pak04121]
C 03051 Proteasome [BR:pak03051]
D HMPREF0675_4270 prcA; proteasome, alpha subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D HMPREF0675_4269 prcB; proteasome, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D HMPREF0675_4431 hypothetical protein K13572 pafB; proteasome accessory factor B
D HMPREF0675_4430 hypothetical protein K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:pak03032]
D HMPREF0675_4782 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HMPREF0675_4732 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF0675_3000 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0675_5319 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF0675_4014 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF0675_5303 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4677 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4211 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0675_3001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0675_3955 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0675_3290 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0675_3789 GIY-YIG catalytic domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_4780 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_3248 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0675_4487 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF0675_3843 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0675_4663 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF0675_3009 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0675_4105 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0675_3008 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0675_4101 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0675_3287 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pak03036]
D HMPREF0675_4508 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0675_5089 putative fructose-bisphosphate aldolase class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0675_3323 hypothetical protein K26249 lsr2; nucleoid-associated protein Lsr2
D HMPREF0675_4732 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF0675_3000 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0675_5195 ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D HMPREF0675_4284 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HMPREF0675_4398 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0675_3820 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF0675_4402 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF0675_3828 POTRA domain protein, FtsQ-type K03589 ftsQ; cell division protein FtsQ
D HMPREF0675_3825 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HMPREF0675_4397 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF0675_3829 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0675_3831 hypothetical protein K09772 sepF; cell division inhibitor SepF
D HMPREF0675_5421 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF0675_4436 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF0675_3172 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF0675_5420 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF0675_5423 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF0675_4589 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D HMPREF0675_4437 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D HMPREF0675_3712 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HMPREF0675_3880 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:pak03400]
D HMPREF0675_3617 putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF0675_5322 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D HMPREF0675_3343 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HMPREF0675_3270 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF0675_3515 helicase C-terminal domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D HMPREF0675_4838 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0675_5096 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0675_4114 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF0675_4299 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF0675_4507 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF0675_4659 putative DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF0675_4954 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF0675_5311 apurinic endonuclease (APN1) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HMPREF0675_4663 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF0675_3843 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0675_3872 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF0675_3869 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF0675_3877 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF0675_4354 HRDC domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_4359 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_4812 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0675_4938 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0675_4937 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0675_4881 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0675_4253 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF0675_3593 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0675_3629 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF0675_3628 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF0675_4211 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0675_3001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0675_3955 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0675_3290 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0675_3789 GIY-YIG catalytic domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_4780 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0675_3248 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0675_5303 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4677 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4356 putative exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HMPREF0675_4355 putative exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HMPREF0675_4357 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HMPREF0675_4071 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF0675_4220 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF0675_4221 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF0675_4219 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HMPREF0675_4256 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0675_3354 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HMPREF0675_3003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF0675_4532 putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF0675_4000 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF0675_3250 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF0675_4443 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HMPREF0675_3009 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0675_4105 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0675_3008 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0675_4101 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0675_3287 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HMPREF0675_4732 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF0675_3980 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HMPREF0675_4720 ImpB/MucB/SamB family protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HMPREF0675_4082 lexA; LexA DNA binding domain protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D HMPREF0675_4696 hypothetical protein K14161 imuB; protein ImuB
D HMPREF0675_4695 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D HMPREF0675_4072 recX; regulatory protein RecX K03565 recX; regulatory protein
D HMPREF0675_4081 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HMPREF0675_3384 hydrolase, NUDIX family K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D HMPREF0675_4438 hydrolase, NUDIX family K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D HMPREF0675_4085 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0675_5178 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0675_5179 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pak03029]
D HMPREF0675_4559 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF0675_4467 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF0675_4587 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF0675_4927 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0675_4931 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF0675_3995 era; ribosome biogenesis GTPase Era K03595 era; GTPase
D HMPREF0675_4458 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0675_3951 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0675_4236 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0675_4005 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF0675_5188 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0675_4185 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF0675_4186 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF0675_4184 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF0675_5303 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_4677 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0675_5105 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0675_5104 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF0675_3491 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_4829 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_4830 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF0675_3974 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF0675_5103 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF0675_4178 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0675_3712 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HMPREF0675_4628 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HMPREF0675_4626 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HMPREF0675_3716 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HMPREF0675_5429 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0675_5418 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pak02000]
D HMPREF0675_5134 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF0675_5133 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF0675_3219 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0675_3218 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0675_5002 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF0675_3855 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF0675_3213 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HMPREF0675_3214 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HMPREF0675_3101 ABC transporter, ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D HMPREF0675_3127 ABC transporter, ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D HMPREF0675_3751 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HMPREF0675_3102 ABC transporter, ATP-binding protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D HMPREF0675_3552 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HMPREF0675_3553 NifC-like protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HMPREF0675_4541 ABC transporter, substrate-binding protein, QAT family K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HMPREF0675_5083 ABC transporter, substrate-binding protein, QAT family K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HMPREF0675_4542 ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D HMPREF0675_4543 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D HMPREF0675_3438 ABC transporter, substrate-binding protein, QAT family K05845 opuC; osmoprotectant transport system substrate-binding protein
D HMPREF0675_3439 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D HMPREF0675_3440 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D HMPREF0675_3441 ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HMPREF0675_3430 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF0675_4618 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF0675_4620 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0675_4621 putative type IV conjugative transfer system protein TraL K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0675_5030 ABC transporter, solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D HMPREF0675_5029 ABC transporter, permease protein K17316 gtsB; glucose/mannose transport system permease protein
D HMPREF0675_5028 ABC transporter, permease protein K17317 gtsC; glucose/mannose transport system permease protein
D HMPREF0675_4701 ABC transporter, solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D HMPREF0675_4705 ABC transporter, permease protein K10238 thuG; trehalose/maltose transport system permease protein
D HMPREF0675_3087 carbohydrate ABC transporter, carbohydrate-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D HMPREF0675_3088 ABC transporter, permease protein K10201 ngcF; N-acetylglucosamine transport system permease protein
D HMPREF0675_3089 ABC transporter, permease protein K10202 ngcG; N-acetylglucosamine transport system permease protein
D HMPREF0675_3059 ABC transporter, solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D HMPREF0675_3058 ABC transporter, permease protein K10241 cebF; cellobiose transport system permease protein
D HMPREF0675_3057 ABC transporter, permease protein K10242 cebG; cellobiose transport system permease protein
D HMPREF0675_3669 ABC transporter, solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D HMPREF0675_4511 ABC transporter, solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D HMPREF0675_3670 hypothetical protein K17245 chiF; putative chitobiose transport system permease protein
D HMPREF0675_4512 ABC transporter, permease protein K17245 chiF; putative chitobiose transport system permease protein
D HMPREF0675_3671 ABC transporter, permease protein K17246 chiG; putative chitobiose transport system permease protein
D HMPREF0675_4513 ABC transporter, permease protein K17246 chiG; putative chitobiose transport system permease protein
D HMPREF0675_3015 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF0675_3014 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF0675_3013 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF0675_4788 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF0675_4785 branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF0675_4784 branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HMPREF0675_4787 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF0675_4013 conserved hypothetical protein TIGR00245 K02069 STAR2; UDP-glucose/iron transport system permease protein
D HMPREF0675_3433 Tat pathway signal sequence domain protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF0675_5021 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF0675_5372 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF0675_3434 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF0675_5371 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF0675_5019 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF0675_3435 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF0675_5370 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF0675_5020 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF0675_3383 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0675_3382 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF0675_3381 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF0675_3380 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF0675_4813 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF0675_4815 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF0675_4814 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF0675_3666 hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF0675_3665 ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0675_5217 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0675_5218 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF0675_5219 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF0675_5220 ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF0675_5221 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF0675_4894 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D HMPREF0675_4342 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0675_4525 Tat pathway signal sequence domain protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF0675_4519 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0675_4341 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF0675_4522 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0675_4340 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF0675_4523 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0675_4339 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF0675_4338 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0675_4524 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF0675_3850 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein
D HMPREF0675_3851 iron chelate uptake ABC transporter, FeCT family, permease protein K25133 hmuU; heme transport system permease protein
D HMPREF0675_3852 ABC transporter, ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D HMPREF0675_3864 putative corrinoid ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HMPREF0675_3076 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HMPREF0675_3462 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HMPREF0675_4837 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HMPREF0675_3723 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HMPREF0675_3375 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HMPREF0675_3863 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HMPREF0675_3077 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HMPREF0675_3460 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HMPREF0675_4836 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HMPREF0675_3724 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HMPREF0675_3377 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HMPREF0675_3078 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF0675_3461 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF0675_4835 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF0675_3725 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF0675_3376 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF0675_4597 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF0675_3862 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF0675_3110 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D HMPREF0675_3109 hypothetical protein K25034 btuF; cobalamin transport system substrate-binding protein
D HMPREF0675_3108 iron chelate uptake ABC transporter, FeCT family, permease protein K25027 btuC; cobalamin transport system permease protein
D HMPREF0675_3107 ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D HMPREF0675_4571 anchored repeat-type ABC transporter, permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein
D HMPREF0675_4570 anchored repeat-type ABC transporter, ATP-binding subunit K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D HMPREF0675_3466 cbiN; cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D HMPREF0675_3467 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D HMPREF0675_3465 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D HMPREF0675_3468 cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HMPREF0675_4449 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D HMPREF0675_4447 cobalt transport protein K16783 bioN; biotin transport system permease protein
D HMPREF0675_4448 ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D HMPREF0675_4871 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D HMPREF0675_4869 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0675_4870 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0675_3197 ABC transporter, ATP-binding protein K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D HMPREF0675_3196 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D HMPREF0675_3683 ABC transporter, substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D HMPREF0675_3681 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D HMPREF0675_3682 ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D HMPREF0675_4397 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF0675_4398 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0675_3987 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0675_4873 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0675_3188 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0675_3447 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0675_4625 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0675_5277 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0675_3986 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_3187 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_3446 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_4624 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_5276 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_4874 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_4972 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_5141 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_3210 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_4557 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_4998 ccmA; heme ABC exporter, ATP-binding protein CcmA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0675_3053 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0675_5095 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0675_5003 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0675_3253 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0675_3920 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0675_3773 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0675_3252 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_3774 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_3054 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_3074 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_3678 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_5094 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_4849 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_3921 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_5004 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0675_4613 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HMPREF0675_4594 sodium bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D HMPREF0675_5334 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF0675_4047 MFS transporter, SP family K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D HMPREF0675_3531 MFS transporter, SP family K06609 iolT; MFS transporter, SP family, major inositol transporter
D HMPREF0675_3506 MFS transporter, SP family K06609 iolT; MFS transporter, SP family, major inositol transporter
D HMPREF0675_4278 putative L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D HMPREF0675_5176 transporter, major facilitator family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D HMPREF0675_3701 putative ATP synthase F0, A subunit K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D HMPREF0675_4152 transporter, major facilitator family protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D HMPREF0675_3755 transporter, major facilitator family protein K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D HMPREF0675_5065 transporter, major facilitator family protein K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D HMPREF0675_3559 transporter, major facilitator family protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HMPREF0675_4296 transporter, major facilitator family protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D HMPREF0675_4892 transporter, major facilitator family protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D HMPREF0675_4103 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family
D HMPREF0675_4877 transporter, major facilitator family protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D HMPREF0675_3941 transporter, major facilitator family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D HMPREF0675_3393 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HMPREF0675_3154 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF0675_3394 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF0675_4552 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF0675_3339 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3749 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HMPREF0675_3340 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HMPREF0675_3744 phosphotransferase system, EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HMPREF0675_3748 phosphotransferase system, EIIB K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D HMPREF0675_3747 phosphotransferase system, EIIB K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D HMPREF0675_4203 phosphotransferase system, EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF0675_4171 phosphotransferase system, EIIB K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D HMPREF0675_5307 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D HMPREF0675_3155 putative ATP synthase F0, A subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF0675_3978 cmtA; EIICB-Mtl K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D HMPREF0675_4209 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0675_4207 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0675_4208 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0675_4551 srlB; PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HMPREF0675_3396 PTS system glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D HMPREF0675_4550 putative ATP synthase F0, A subunit K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D HMPREF0675_4549 srlA; PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D HMPREF0675_3020 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D HMPREF0675_3406 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D HMPREF0675_3023 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3397 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3407 PTS system, Lactose/Cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D HMPREF0675_3022 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D HMPREF0675_3483 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF0675_3482 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF0675_5009 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D HMPREF0675_5383 MIP family channel protein K02440 glpF; glycerol uptake facilitator
D HMPREF0675_4226 TrkA N-terminal domain protein K10716 kch; voltage-gated potassium channel
D HMPREF0675_4037 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D HMPREF0675_4038 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D HMPREF0675_3536 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D HMPREF0675_5375 transporter, small conductance mechanosensitive ion channel MscS family protein K22044 ybiO; moderate conductance mechanosensitive channel
D HMPREF0675_4770 putative magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D HMPREF0675_3838 putative protein CrcB K06199 crcB; fluoride exporter
D HMPREF0675_3839 putative protein CrcB K06199 crcB; fluoride exporter
D HMPREF0675_4790 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF0675_3994 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF0675_3311 OmpA family protein K16191 K16191; peptidoglycan-binding protein ArfA
D HMPREF0675_3652 amino acid permease K11733 lysP; lysine-specific permease
D HMPREF0675_4685 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D HMPREF0675_5360 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D HMPREF0675_5345 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D HMPREF0675_5361 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D HMPREF0675_4365 amino acid permease K11738 ansP; L-asparagine permease
D HMPREF0675_3409 amino acid permease K11738 ansP; L-asparagine permease
D HMPREF0675_3643 putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D HMPREF0675_3217 Tat pathway signal sequence domain protein K20265 gadC; glutamate:GABA antiporter
D HMPREF0675_4291 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D HMPREF0675_3982 putative membrane protein K11939 rhtA; inner membrane transporter RhtA
D HMPREF0675_3807 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HMPREF0675_3098 transporter, anaerobic C4-dicarboxylate uptake (Dcu) family K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D HMPREF0675_4102 transporter, anaerobic C4-dicarboxylate uptake (Dcu) family K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D HMPREF0675_3206 transporter, lactate permease (LctP) family K03303 lutP; lactate permease
D HMPREF0675_3274 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D HMPREF0675_5243 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D HMPREF0675_4117 TrkA N-terminal domain protein K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF0675_4118 TrkA N-terminal domain protein K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF0675_3523 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HMPREF0675_3263 stp; serine transporter K26604 cyuP; cysteine uptake transport protein
D HMPREF0675_3080 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF0675_5328 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF0675_5091 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family K03322 mntH; manganese transport protein
D HMPREF0675_5211 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HMPREF0675_5253 putative potassium uptake protein K03549 kup; KUP system potassium uptake protein
D HMPREF0675_3988 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D HMPREF0675_3950 membrane protein K22736 VIT; vacuolar iron transporter family protein
D HMPREF0675_3825 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HMPREF0675_4623 hppA; membrane-bound proton-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D HMPREF0675_3367 cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D HMPREF0675_3557 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3556 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3554 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HMPREF0675_3564 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HMPREF0675_3563 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HMPREF0675_4472 pnuC; nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D HMPREF0675_4726 FeoA domain protein K04758 feoA; ferrous iron transport protein A
D HMPREF0675_4727 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D HMPREF0675_3160 O-antigen polymerase K18814 ictB; putative inorganic carbon (hco3(-)) transporter
C 02044 Secretion system [BR:pak02044]
D HMPREF0675_3277 helicase/secretion neighborhood ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF0675_3041 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF0675_3278 hypothetical protein K12510 tadB; tight adherence protein B
D HMPREF0675_3043 bacterial type II secretion system domain protein F K12511 tadC; tight adherence protein C
D HMPREF0675_3832 YGGT family protein K02221 yggT; YggT family protein
D HMPREF0675_3314 hypothetical protein K02221 yggT; YggT family protein
D HMPREF0675_3952 comEA protein K02237 comEA; competence protein ComEA
D HMPREF0675_5010 cytidine and deoxycytidylate deaminase zinc-binding region K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HMPREF0675_3953 putative DNA internalization competence protein ComEC/Rec2-like protein K02238 comEC; competence protein ComEC
D HMPREF0675_4372 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0675_4223 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HMPREF0675_4944 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0675_4224 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HMPREF0675_3884 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0675_4890 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0675_4498 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0675_4500 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0675_4222 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0675_5429 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0675_4428 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HMPREF0675_3710 putative twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D HMPREF0675_4427 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pak02042]
D HMPREF0675_4790 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF0675_3994 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF0675_5162 CAMP factor (Cfa) K11045 cfa; cAMP factor
D HMPREF0675_3756 CAMP factor (Cfa) K11045 cfa; cAMP factor
D HMPREF0675_4260 hypothetical protein K11045 cfa; cAMP factor
D HMPREF0675_4379 hypothetical protein K11045 cfa; cAMP factor
D HMPREF0675_4294 CAMP factor (Cfa) K11045 cfa; cAMP factor
D HMPREF0675_3625 hypothetical protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pak02022]
D HMPREF0675_3401 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF0675_3400 response regulator receiver domain protein K07776 regX3; two-component system, OmpR family, response regulator RegX3
D HMPREF0675_3123 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HMPREF0675_3124 response regulator receiver domain protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HMPREF0675_5167 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D HMPREF0675_5166 response regulator receiver domain protein K07669 mprA; two-component system, OmpR family, response regulator MprA
D HMPREF0675_4376 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D HMPREF0675_4377 response regulator receiver domain protein K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D HMPREF0675_5108 response regulator receiver domain protein K02483 K02483; two-component system, OmpR family, response regulator
D HMPREF0675_3448 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF0675_3449 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR
D HMPREF0675_4329 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D HMPREF0675_3841 response regulator receiver domain protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:pak02035]
D HMPREF0675_3277 helicase/secretion neighborhood ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF0675_3041 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pak04812]
D HMPREF0675_3829 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0675_5421 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF0675_4436 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF0675_3172 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF0675_5420 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pak04147]
D HMPREF0675_5089 putative fructose-bisphosphate aldolase class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HMPREF0675_3597 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0675_3881 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0675_3882 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0675_3837 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0675_3788 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF0675_3491 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_4829 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0675_5105 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0675_5192 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0675_4824 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF0675_4825 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF0675_4927 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0675_4423 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF0675_3945 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_3011 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_5012 lactate/malate dehydrogenase, NAD binding domain protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0675_4594 sodium bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D HMPREF0675_4671 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_5310 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF0675_4889 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF0675_4225 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF0675_4391 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF0675_5270 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF0675_3672 hypothetical protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF0675_5364 GHMP kinase, N-terminal domain protein K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0675_5262 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0675_4173 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF0675_5382 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HMPREF0675_3731 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3740 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0675_3345 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HMPREF0675_4337 putative phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HMPREF0675_4801 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF0675_4290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0675_5284 etfA; electron transfer flavoprotein FAD-binding domain protein K03522 fixB; electron transfer flavoprotein alpha subunit
D HMPREF0675_4630 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF0675_3883 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF0675_3405 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0675_3875 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pak02048]
D HMPREF0675_4819 PspC domain protein K03973 pspC; phage shock protein C
D HMPREF0675_5125 toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein K21495 fitA; antitoxin FitA
D HMPREF0675_3829 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0675_4432 putative glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF0675_4178 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:pak04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pak01504]
D HMPREF0675_3127 ABC transporter, ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pak03100]
D HMPREF0675_3134 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0675_3904 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0675_3543 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0675_4323 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0675_3532 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0675_5257 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0675_4681 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0675_4017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF0675_5026 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF0675_4132 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF0675_4412 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0675_3580 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0675_5025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0675_4411 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0675_4133 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0675_4644 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0675_5122 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0675_4684 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF0675_3018 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF0675_4708 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_4478 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_5203 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_3840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_3601 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0675_5022 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0675_4700 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0675_4030 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0675_4343 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0675_4951 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0675_5027 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF0675_5215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0675_4275 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0675_4654 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0675_5245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0675_5259 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0675_5266 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0675_3244 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0675_4952 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0675_3296 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0675_3478 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0675_4945 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF0675_4953 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF0675_4134 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0675_4131 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0675_4400 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0675_3607 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_4693 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_4456 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0675_3609 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0675_4692 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0675_4455 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0675_3611 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0675_4453 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0675_4690 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0675_3246 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF0675_3719 rnpB; bacterial RNase P class A K01978 rnpB; M1 RNA
D HMPREF0675_4388 HMPREF0675_4388 K15035 ssrA; transfer-messenger RNA
D HMPREF0675_4386 HMPREF0675_4386 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HMPREF0675_5189 oxidoreductase, aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D HMPREF0675_4054 oxidoreductase, aldo/keto reductase family protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D HMPREF0675_4994 geranylgeranyl reductase family K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D HMPREF0675_5283 FAD dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D HMPREF0675_4774 flavoprotein disulfide reductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D HMPREF0675_5320 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HMPREF0675_3374 putative mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D HMPREF0675_5055 ahpF; alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D HMPREF0675_3615 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D HMPREF0675_4125 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D HMPREF0675_4707 antioxidant, AhpC/TSA family K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HMPREF0675_3651 redoxin family protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HMPREF0675_5054 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D HMPREF0675_3640 peroxiredoxin, Ohr subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D HMPREF0675_5298 ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2]
D HMPREF0675_5197 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HMPREF0675_5354 hypothetical protein K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263]
D HMPREF0675_5355 pyridoxal-phosphate dependent protein K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263]
D HMPREF0675_4285 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D HMPREF0675_3690 acetyltransferase, GNAT family K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D HMPREF0675_5293 aat; leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D HMPREF0675_3084 gnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D HMPREF0675_3742 glycosyltransferase, group 1 family protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D HMPREF0675_3161 glycosyltransferase, group 1 family protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D HMPREF0675_4195 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HMPREF0675_5114 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D HMPREF0675_3734 glnE; [glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D HMPREF0675_3353 hypothetical protein K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D HMPREF0675_5286 CoA-transferase family III protein K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D HMPREF0675_3936 phosphotriesterase family protein K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D HMPREF0675_3444 macro domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D HMPREF0675_4670 acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HMPREF0675_3903 phosphoglycerate mutase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D HMPREF0675_4367 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HMPREF0675_3300 phosphoglycerate mutase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D HMPREF0675_3575 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HMPREF0675_4164 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D HMPREF0675_4636 F5/8 type C domain protein K17624 engCP; endo-alpha-N-acetylgalactosaminidase [EC:3.2.1.97]
D HMPREF0675_3711 cellulase (glycosyl hydrolase family 5) K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]
D HMPREF0675_5160 cellulase (glycosyl hydrolase family 5) K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]
D HMPREF0675_3133 Cpl-7 lysozyme C-terminal domain protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HMPREF0675_4592 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF0675_5207 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HMPREF0675_5210 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HMPREF0675_3816 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HMPREF0675_4035 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HMPREF0675_3112 hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D HMPREF0675_4851 YjeF domain protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HMPREF0675_3415 hyaluronate lyase K01727 hysA; hyaluronate lyase [EC:4.2.2.1]
D HMPREF0675_4433 peptidyl-prolyl cis-trans isomerase, FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D HMPREF0675_5227 fkbP; FK506-binding protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D HMPREF0675_5081 hypothetical protein K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D HMPREF0675_3503 iolH; protein IolH K06605 iolH; myo-inositol catabolism protein IolH
D HMPREF0675_3207 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D HMPREF0675_3208 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D HMPREF0675_3209 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D HMPREF0675_4611 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D HMPREF0675_5285 electron transfer flavoprotein domain protein K03521 fixA; electron transfer flavoprotein beta subunit
D HMPREF0675_5046 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D HMPREF0675_4039 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HMPREF0675_5315 G5 domain protein K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D HMPREF0675_3979 DoxX family protein K15977 K15977; putative oxidoreductase
D HMPREF0675_3291 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HMPREF0675_4548 glucitol operon activator protein (GutM) K02466 gutM; glucitol operon activator protein
D HMPREF0675_3520 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D HMPREF0675_4730 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D HMPREF0675_4642 tig; trigger factor K03545 tig; trigger factor
D HMPREF0675_4396 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HMPREF0675_4484 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D HMPREF0675_5391 OsmC-like protein K07397 yhfA; putative redox protein
D HMPREF0675_3368 ResB-like protein K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D HMPREF0675_3633 putative flagellar protein FliS K09760 rmuC; DNA recombination protein RmuC
D HMPREF0675_4485 TIGR00252 family protein K07460 yraN; putative endonuclease
D HMPREF0675_4483 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D HMPREF0675_4237 ATPase, AAA family K07478 ycaJ; putative ATPase
D HMPREF0675_5158 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D HMPREF0675_3767 PspA/IM30 family protein K03969 pspA; phage shock protein A
D HMPREF0675_3249 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HMPREF0675_5411 transporter, major facilitator family protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HMPREF0675_5329 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D HMPREF0675_4129 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D HMPREF0675_5097 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D HMPREF0675_3151 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D HMPREF0675_5107 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HMPREF0675_5263 toxin secretion/phage lysis holin K03307 TC.SSS; solute:Na+ symporter, SSS family
D HMPREF0675_3616 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HMPREF0675_4827 agcS; amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HMPREF0675_5087 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D HMPREF0675_5282 permease, cytosine/purine, uracil, thiamine, allantoin family K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D HMPREF0675_3685 permease, cytosine/purine, uracil, thiamine, allantoin family K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D HMPREF0675_5099 TrkA C-terminal domain protein K07085 K07085; putative transport protein
C 99978 Cell growth
D HMPREF0675_5428 R3H domain protein K06346 jag; spoIIIJ-associated protein
D HMPREF0675_3129 resolvase, N-terminal domain protein K06400 spoIVCA; site-specific DNA recombinase
D HMPREF0675_3130 resolvase, N-terminal domain protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D HMPREF0675_3728 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D HMPREF0675_5068 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D HMPREF0675_3992 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D HMPREF0675_3626 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D HMPREF0675_4641 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D HMPREF0675_3402 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D HMPREF0675_3870 integral membrane protein, TerC family K05794 terC; tellurite resistance protein TerC
D HMPREF0675_3513 CutC family protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HMPREF0675_4608 acetyltransferase, GNAT family K02348 elaA; ElaA protein
D HMPREF0675_3285 putative DEAH-box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D HMPREF0675_3071 MMPL family protein K06994 K06994; putative drug exporter of the RND superfamily
D HMPREF0675_5014 phospholipase, patatin family K07001 K07001; NTE family protein
D HMPREF0675_4616 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HMPREF0675_4615 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D HMPREF0675_4151 putative ribonuclease K07058 K07058; membrane protein
D HMPREF0675_5079 SNARE-like domain protein K03975 dedA; membrane-associated protein
D HMPREF0675_3743 SNARE-like domain protein K03975 dedA; membrane-associated protein
D HMPREF0675_4266 YhgE/Pip domain protein K01421 yhgE; putative membrane protein
D HMPREF0675_3072 YhgE/Pip domain protein K01421 yhgE; putative membrane protein
D HMPREF0675_3750 hypothetical protein K08996 yagU; putative membrane protein
D HMPREF0675_5084 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D HMPREF0675_3106 putative bacteriochlorophyll 4-vinyl reductase K06871 K06871; uncharacterized protein
D HMPREF0675_3623 hypothetical protein K06888 K06888; uncharacterized protein
D HMPREF0675_4495 hypothetical protein K06960 K06960; uncharacterized protein
D HMPREF0675_3099 hypothetical protein K06975 K06975; uncharacterized protein
D HMPREF0675_4572 acetyltransferase, GNAT family K06976 K06976; uncharacterized protein
D HMPREF0675_4531 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D HMPREF0675_3332 TIGR01777 family protein K07071 K07071; uncharacterized protein
D HMPREF0675_5209 putative permease K07089 K07089; uncharacterized protein
D HMPREF0675_4564 hypothetical protein K07090 K07090; uncharacterized protein
D HMPREF0675_5214 Ser/Thr phosphatase family protein K07098 K07098; uncharacterized protein
D HMPREF0675_3689 phosphoribosyl transferase domain protein K07101 K07101; uncharacterized protein
D HMPREF0675_5312 oxidoreductase, short chain dehydrogenase/reductase family protein K07124 K07124; uncharacterized protein
D HMPREF0675_3371 oxidoreductase, short chain dehydrogenase/reductase family protein K07124 K07124; uncharacterized protein
D HMPREF0675_3463 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF0675_3718 putative zinc ribbon domain protein K07164 K07164; uncharacterized protein
D HMPREF0675_4149 hypothetical protein K08999 K08999; uncharacterized protein
D HMPREF0675_3599 hypothetical protein K09009 K09009; uncharacterized protein
D HMPREF0675_3065 hypothetical protein K09704 K09704; uncharacterized protein
D HMPREF0675_5173 hypothetical protein K09780 K09780; uncharacterized protein
D HMPREF0675_4739 hypothetical protein K09791 K09791; uncharacterized protein
D HMPREF0675_5111 hypothetical protein K09992 K09992; uncharacterized protein
D HMPREF0675_4560 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024