+D GENES KO #

  KEGG Orthology (KO) - Photorhabdus asymbiotica

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pay00010] D PAU_01412 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PAU_03932 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAU_04264 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAU_04051 fbp; fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase) K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAU_01758 fbaB; fructose-biphosphate aldolase class i (fbp aldolase) K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PAU_00879 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAU_04262 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PAU_01974 gapA; glyceraldehyde-3-phosphate dehydrogenase a (gapdh-a) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAU_00878 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PAU_02950 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAU_00529 gpmB; probable phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAU_00841 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAU_01920 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAU_02458 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAU_01902 ppsA; phosphoenolpyruvate synthase (pep synthase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PAU_01138 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PAU_01139 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenas complex (e2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_03905 adhC; glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAU_02030 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAU_02881 yiaY; probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAU_00062 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAU_00183 yihX; conserved hypothetical protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D PAU_02994 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAU_01973 yeaD; conserved hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D PAU_00083 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PAU_01785 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAU_00546 bglB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAU_01402 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:pay00020] D PAU_02979 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PAU_02077 acnA; aconitate hydrase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PAU_01141 acnB; aconitate hydratase 2 (citrate hydro-lyase 2) (aconitase 2) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PAU_01740 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAU_02974 sucA; 2-oxoglutarate dehydrogenase e1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PAU_02973 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarat dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_02971 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PAU_02972 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PAU_02976 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAU_02975 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAU_02978 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PAU_02977 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PAU_03748 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAU_03749 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAU_03750 frdC; fumarate reductase 15 kda hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C D PAU_03751 frdD; fumarate reductase 13 kda hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D D PAU_02159 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PAU_04048 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAU_00083 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PAU_01138 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PAU_01139 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenas complex (e2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:pay00030] D PAU_03932 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAU_02443 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAU_02942 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D PAU_02885 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PAU_00068 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PAU_00868 tktA; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAU_00538 tal; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D PAU_01151 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D PAU_00513 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PAU_00055 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D PAU_00515 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PAU_02994 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAU_02529 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAU_00128 eda; khg/kdpg aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PAU_03867 gntK; thermoresistant gluconokinase (gluconate kinase 2) K00851 idnK; gluconokinase [EC:2.7.1.12] D PAU_00127 kdgK; 2-dehydro-3-deoxygluconokinase (2-keto-3-deoxygluconokinase) (3-deoxy 2-oxo-d-gluconate kinase) (kdg kinase) K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D PAU_01758 fbaB; fructose-biphosphate aldolase class i (fbp aldolase) K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PAU_00879 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAU_04051 fbp; fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase) K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAU_04264 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:pay00040] D PAU_00126 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D PAU_00120 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D PAU_00125 uxuB; mannonate oxidoreductase (d-mannonate oxidoreductase) K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D PAU_02026 ugd; putative udp-glucose dehydrogenase (putative nucleotide suga dehydrogenase) K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PAU_02025 galU; utp--glucose-1-phosphate uridylyltransferase (udp-glucos pyrophosphorylase) (udpgp) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAU_00068 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PAU_02204 ydjJ; conserved hypothetical protein K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9] D PAU_00382 conserved hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PAU_02153 probable aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D PAU_01077 conserved hypothetical protein K00875 rbtK; D-ribulokinase [EC:2.7.1.47] D PAU_00702 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D PAU_00701 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51] D PAU_00704 fucA; l-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:pay00051] D PAU_01258 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PAU_02157 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PAU_00702 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D PAU_00701 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51] D PAU_00704 fucA; l-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D PAU_04264 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAU_04051 fbp; fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase) K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAU_01678 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D PAU_00382 conserved hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PAU_01758 fbaB; fructose-biphosphate aldolase class i (fbp aldolase) K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PAU_00879 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAU_04262 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PAU_01837 manX; pts system, mannose-specific iiab component (eiiab-man) (mannose permease iiab component) (phosphotransferase enzyme ii, ab component (eiii-man) K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D PAU_01836 manY; pts system, mannose-specific iic component (eiic-man) (mannose permease iic component) (phosphotransferase enzyme ii, c component (eii-p-man) K02795 manY; mannose PTS system EIIC component D PAU_01835 manZ; pts system, mannose-specific iid component (eiid-man) (mannose permease iid component) (phosphotransferase enzyme ii, d component (eii-m-man) K02796 manZ; mannose PTS system EIID component C 00052 Galactose metabolism [PATH:pay00052] D PAU_00541 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PAU_00540 galT; galactose-1-phosphate uridylyltransferase (gal-1-uridylyltransferase) (udp-glucose--hexose-1-phosphat uridylyltransferase) K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PAU_04343 galE; udp-glucose 4-epimerase (galactowaldenase) (udp-galactose 4 epimerase) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAU_02025 galU; utp--glucose-1-phosphate uridylyltransferase (udp-glucos pyrophosphorylase) (udpgp) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAU_02994 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAU_01412 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PAU_04264 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAU_00779 gatY; tagatose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D PAU_00773 agaZ; putative tagatose 6-phosphate kinase 2 K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D PAU_01261 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D PAU_00778 yadI; similar to putative pts system iia component yadi of escherichia coli K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D PAU_00775 agaV; pts system, n-acetylgalactosamine-specific iib component 2 (eiib-aga' (n-acetylgalactosamine-permease iib component 2) (phosphotransferas enzyme ii, b component 2) K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D PAU_00776 agaC; pts system, n-acetylgalactosamine-specific iic component 1 (eiic-aga (n-acetylgalactosamine-permease iic component 1) K02746 agaW; N-acetylgalactosamine PTS system EIIC component D PAU_00777 agaD; pts system, n-acetylgalactosamine-specific iid component (eiid-aga (n-acetylgalactosamine-permease iid component) (phosphotransferas enzyme ii, d component) K02747 agaE; N-acetylgalactosamine PTS system EIID component D PAU_00774 agaS; putative tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism [PATH:pay00053] D PAU_02026 ugd; putative udp-glucose dehydrogenase (putative nucleotide suga dehydrogenase) K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PAU_02027 wbnF; Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PAU_02591 sgcA; putative phosphotransferase enzyme ii, a component sgca K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAU_02590 sgaB; conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAU_02589 conserved hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAU_02153 probable aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00500 Starch and sucrose metabolism [PATH:pay00500] D PAU_01260 scrA; PTS system, sucrose-specific IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PAU_01261 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D PAU_02025 galU; utp--glucose-1-phosphate uridylyltransferase (udp-glucos pyrophosphorylase) (udpgp) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAU_01786 celC; pts system, cellobiose-specific iia component (eiia-cel) (cellobiose permease iia component) (phosphotransferase enzyme ii, a component (eiii-cel) K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAU_01788 celA; pts system, cellobiose-specific iib component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAU_01787 celB; phosphotransferase system cellobiose-specific component iic K02761 celB; cellobiose PTS system EIIC component D PAU_01785 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAU_00546 bglB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAU_00377 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PAU_00091 pulA; alpha-dextrin endo-1,6-alpha-glucosidase (pullulanase) K01200 pulA; pullulanase [EC:3.2.1.41] D PAU_00376 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D PAU_01402 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAU_01357 treB; pts system, trehalose-specific iibc component (eiibc-tre) (trehalose permease iibc component) (phosphotransferase enzyme ii, bc component (eii-tre) K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D PAU_01358 treC; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D PAU_02994 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAU_01412 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PAU_03932 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAU_01258 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pay00520] D PAU_02056 similar to exochitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D PAU_02059 chi; similar to exochitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D PAU_01716 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PAU_03084 chb; chitobiase (n-acetyl-beta-glucosaminidase)-beta-n acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PAU_01402 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAU_03088 nagE; pts system, n-acetylglucosamine-specific iiabc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PAU_03090 nagA; n-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D PAU_03089 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D PAU_01258 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PAU_00033 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAU_04033 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D PAU_00034 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PAU_00314 putative PTS system EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D PAU_00315 yfeU; similar to putative regulator yfeu protein of escherichia coli K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D PAU_01936 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D PAU_03665 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAU_00633 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAU_04225 murB; udp-n-acetylenolpyruvoylglucosamine reductase (ec 1.1.1.158) K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PAU_04140 wecB; udp-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PAU_04139 wecC; udp-n-acetyl-d-mannosaminuronic acid dehydrogenase (udp-mannac dehydrogenase) K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D PAU_04311 udg; similar to udp-glucose/gdp-mannose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D PAU_04312 wblB; probable dehydrogenase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D PAU_04314 wblD; cys/met metabolism pyridoxal-phosphate-dependen enzymes:degt/dnrj/eryc1/strs aminotransferase:aromatic amino aci beta-eliminating lyase/threonine aldolase:aminotransferase, class and ii K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D PAU_04313 wblC; acetyltransferases (the isoleucine patch superfamily) K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D PAU_04319 wblH; similar to udp-n-acetylglucosamine 2-epimerase (probable udp-n acetylglucosamine 2-epimerase wbpi) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D PAU_04338 wbpP; putative nad-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] D PAU_04337 gna; udp-n-acetyl-d-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D PAU_01877 arnA; bifunctional polymyxin resistance protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D PAU_01875 arnB; UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D PAU_01876 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D PAU_01878 conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D PAU_03511 glycoside hydrolase, family 39 precursor K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D PAU_01412 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PAU_02994 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAU_02025 galU; utp--glucose-1-phosphate uridylyltransferase (udp-glucos pyrophosphorylase) (udpgp) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAU_02026 ugd; putative udp-glucose dehydrogenase (putative nucleotide suga dehydrogenase) K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PAU_00541 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PAU_00540 galT; galactose-1-phosphate uridylyltransferase (gal-1-uridylyltransferase) (udp-glucose--hexose-1-phosphat uridylyltransferase) K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PAU_04343 galE; udp-glucose 4-epimerase (galactowaldenase) (udp-galactose 4 epimerase) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAU_02027 wbnF; Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PAU_01837 manX; pts system, mannose-specific iiab component (eiiab-man) (mannose permease iiab component) (phosphotransferase enzyme ii, ab component (eiii-man) K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D PAU_01836 manY; pts system, mannose-specific iic component (eiic-man) (mannose permease iic component) (phosphotransferase enzyme ii, c component (eii-p-man) K02795 manY; mannose PTS system EIIC component D PAU_01835 manZ; pts system, mannose-specific iid component (eiid-man) (mannose permease iid component) (phosphotransferase enzyme ii, d component (eii-m-man) K02796 manZ; mannose PTS system EIID component D PAU_03932 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAU_02157 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PAU_02392 conserved hypothetical protein K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:pay00620] D PAU_00062 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAU_01138 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PAU_01139 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenas complex (e2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_02837 pflB; formate acetyltransferase i (pyruvate formate-lyase 1) K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PAU_02030 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAU_02881 yiaY; probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PAU_03905 adhC; glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAU_01513 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PAU_01512 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PAU_01920 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAU_02458 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAU_00660 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PAU_03706 accB; biotin carboxyl carrier protein of acetyl-coa carboxylase (bccp) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PAU_03707 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAU_02227 acetyl-coa carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAU_01453 accD; acetyl-coenzyme a carboxylase carboxyl transferase subunit bet (accase beta chain) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PAU_00440 biotin carboxylase/biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PAU_02732 acylphosphatase (acylphosphate phosphohydrolase) K01512 acyP; acylphosphatase [EC:3.6.1.7] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAU_02421 ldhA; fermentative d-lactate dehydrogenase, nad-dependent (fermentative d lactate dehydrogenase) K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D PAU_01690 dld; d-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D PAU_01932 gloA; lactoylglutathione lyase (methylglyoxalase) (s-d-lactolyglutathion methylglyoxal lyase) K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D PAU_00858 gloB; hydroxyacylglutathione hydrolase (glyoxalase ii) K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PAU_02767 ycbL; conserved hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PAU_02507 ycdW; similar to probable 2-hydroxyacid dehydrogenase ycdw of escherichi coli K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAU_02896 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PAU_01820 maeB; nadp-dependent malic enzyme (nadp-me) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D PAU_04048 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAU_02159 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PAU_03748 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAU_03749 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAU_03750 frdC; fumarate reductase 15 kda hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C D PAU_03751 frdD; fumarate reductase 13 kda hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D D PAU_04239 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PAU_00083 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PAU_01902 ppsA; phosphoenolpyruvate synthase (pep synthase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PAU_00416 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_01097 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pay00630] D PAU_00417 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D PAU_00062 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAU_00416 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D PAU_04048 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAU_02979 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PAU_02077 acnA; aconitate hydrase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PAU_01141 acnB; aconitate hydratase 2 (citrate hydro-lyase 2) (aconitase 2) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_02213 conserved hypothetical protein K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] D PAU_00440 biotin carboxylase/biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PAU_01545 katE; catalase; hydroperoxidase hpii(iii) K03781 katE; catalase [EC:1.11.1.6] D PAU_02507 ycdW; similar to probable 2-hydroxyacid dehydrogenase ycdw of escherichi coli K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAU_00067 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D PAU_02367 conserved hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D PAU_00179 glnA; glutamine synthetase (glutamate--ammonia ligase) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAU_01354 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAU_01161 gcvP; glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAU_01159 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_01160 gcvH; glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein D PAU_03725 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PAU_00128 eda; khg/kdpg aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PAU_02307 conserved hypothetical protein K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2] D PAU_04392 fdoG1; putative formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PAU_04391 fdoH1; formate dehydrogenase-o, iron-sulfur subunit (formate dehydrogenase-beta subunit) (fdh-z beta subunit) (aerobic formate dehydrogenas iron-sulfur subunit) K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PAU_00743 fdoH2; putative formate dehydrogenase-o, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PAU_00742 gene0005; putative aerobic formate dehydrogenase-o subunit K00127 fdoI; formate dehydrogenase subunit gamma D PAU_04390 fdoI1; formate dehydrogenase, cytochrome b556(fdo) subunit (format dehydrogenase-o gamma subunit) (fdh-z gamma subunit) (aerobic format dehydrogenase cytochrome b556 subunit) K00127 fdoI; formate dehydrogenase subunit gamma D PAU_02022 purU; formyltetrahydrofolate deformylase (formyl-fh(4) hydrolase) K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PAU_03020 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:pay00640] D PAU_00062 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAU_01237 prpE; propionate--coa ligase (propionyl-coa synthetase) K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D PAU_01513 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PAU_01512 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PAU_02673 similar to 3-methyl-2-oxobutanoate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_02837 pflB; formate acetyltransferase i (pyruvate formate-lyase 1) K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PAU_02326 aco; conserved hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAU_03704 yhdH; similar to putative dehydrogenase yhdh of escherichia coli K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_00660 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PAU_03706 accB; biotin carboxyl carrier protein of acetyl-coa carboxylase (bccp) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PAU_03707 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAU_02227 acetyl-coa carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAU_01453 accD; acetyl-coenzyme a carboxylase carboxyl transferase subunit bet (accase beta chain) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PAU_00440 biotin carboxylase/biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PAU_01177 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAU_02208 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PAU_02972 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PAU_02971 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PAU_02709 putative methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAU_01235 prpC; 2-methylcitrate synthase (methylcitrate synthase) (citrate synthas 2) K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D PAU_01236 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D PAU_01141 acnB; aconitate hydratase 2 (citrate hydro-lyase 2) (aconitase 2) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PAU_01234 prpB; methylisocitrate lyase (2-methylisocitrate lyase) K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D PAU_02739 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D PAU_02906 yqhD; conserved hypothetical protein K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D PAU_03738 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:pay00650] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_02454 putative 3-hydroxyacyl-coa dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_01020 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D PAU_01019 atoA; acetate coa-transferase beta subunit (acetyl-coa:acetoacetate co transferase beta subunit) K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D PAU_02030 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAU_02976 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAU_02975 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAU_02978 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PAU_02977 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PAU_03748 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAU_03749 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAU_03750 frdC; fumarate reductase 15 kda hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C D PAU_03751 frdD; fumarate reductase 13 kda hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D D PAU_01177 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAU_00927 gabD; succinate-semialdehyde dehydrogenase, nadp-dependent activit (succinate-semialdehyde dehydrogenase) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAU_02837 pflB; formate acetyltransferase i (pyruvate formate-lyase 1) K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PAU_04165 ilvG; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAU_01101 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAU_01102 ilvH; acetolactate synthase isozyme iii small subunit (ahas-iii (acetohydroxy-acid synthase iii small subunit) (als-iii) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAU_04164 ilvM; acetolactate synthase isozyme ii small subunit (ahas-ii (acetohydroxy-acid synthase ii small subunit) (als-ii) K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:pay00660] D PAU_04165 ilvG; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAU_01101 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAU_01102 ilvH; acetolactate synthase isozyme iii small subunit (ahas-iii (acetohydroxy-acid synthase iii small subunit) (als-iii) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAU_04164 ilvM; acetolactate synthase isozyme ii small subunit (ahas-ii (acetohydroxy-acid synthase ii small subunit) (als-ii) K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PAU_02972 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PAU_02971 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PAU_01095 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PAU_01094 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PAU_01096 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:pay00562] D PAU_01359 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAU_02131 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAU_00849 conserved hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAU_02129 conserved hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PAU_02396 conserved hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PAU_02711 idhA; putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D PAU_02715 conserved hypothetical protein K03335 iolE; inosose dehydratase [EC:4.2.1.44] D PAU_02710 similar to myo-inositol catabolism iold of bacillus subtilis K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D PAU_02717 conserved hypothetical protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D PAU_02714 similar to myo-inositol catabolism protein iolc of bacillus subtilis K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D PAU_02709 putative methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAU_04262 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pay00190] D PAU_01520 nuoA; nadh-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D PAU_01521 nuoB; nadh dehydrogenase i chain b (nadh-ubiquinone oxidoreductase chain 2 (nuo2) K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PAU_01522 nuoC; nadh dehydrogenase i chain c/d (nadh-ubiquinone oxidoreductase chai 3/4) (nuo3/nuo4) K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D PAU_01523 nuoE; nadh dehydrogenase i chain e (nadh-ubiquinone oxidoreductase chain 5 (nuo5) K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D PAU_01524 nuoF; nadh dehydrogenase i chain f (nadh-ubiquinone oxidoreductase chain 6 (nuo6) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D PAU_01525 nuoG; nadh-quinone oxidoreductase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D PAU_01526 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D PAU_01527 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PAU_01528 nuoJ; nadh dehydrogenase i chain j (nadh-ubiquinone oxidoreductase chain j) K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D PAU_01529 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D PAU_01530 nuoL; nadh dehydrogenase i chain l (nadh-ubiquinone oxidoreductase chain l (nuo12) K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D PAU_01531 nuoM; nadh dehydrogenase i chain m (nadh-ubiquinone oxidoreductase chain m (nuo13) K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D PAU_01532 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D PAU_01717 ndh; respiratory nadh dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D PAU_02976 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAU_02975 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAU_02978 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PAU_02977 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PAU_03748 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAU_03749 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAU_03750 frdC; fumarate reductase 15 kda hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C D PAU_03751 frdD; fumarate reductase 13 kda hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D D PAU_03431 cyoE; Protoheme IX farnesyltransferase (Heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141] D PAU_03430 cyoD; Cytochrome O ubiquinol oxidase protein cyoD (Ubiquinol oxidase chain D) K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D PAU_03429 cyoC; Cytochrome O ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D PAU_03428 Ubiquinol oxidase polypeptide I (Cytochrome O subunit 1) (Oxidase BO(3) subunit 1) (Cytochrome O ubiquinol oxidase subunit 1) (Ubiquinol oxidase chain A) K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D PAU_03427 Ubiquinol oxidase polypeptide II (Cytochrome O subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome O ubiquinol oxidase subunit 2) (Ubiquinol oxidase chain B) K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D PAU_02967 cydA2; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAU_02547 cioA; ubiquinol oxidase subunit i, cyanide insensitive K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAU_00874 cydA1; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAU_02966 cydB2; cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAU_02548 cioB; ubiquinol oxidase subunit ii, cyanide insensitive K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAU_00875 cydB1; cytochrome d terminal oxidase polypeptide subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAU_02965 putative membrane protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D PAU_00038 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PAU_00036 atpD; membrane-bound ATP synthase F1 sector beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PAU_00037 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PAU_00039 atpH; membrane-bound ATP synthase F1 sector delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PAU_00035 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PAU_00042 atpB; membrane-bound ATP synthase F0 sector subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PAU_00040 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PAU_00041 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PAU_04052 ppa; inorganic pyrophosphatase (pyrophosphate phospho-hydrolase) (ppase) K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D PAU_01777 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:pay00680] D PAU_03905 adhC; glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAU_03906 conserved hypothetical protein K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D PAU_04392 fdoG1; putative formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PAU_04391 fdoH1; formate dehydrogenase-o, iron-sulfur subunit (formate dehydrogenase-beta subunit) (fdh-z beta subunit) (aerobic formate dehydrogenas iron-sulfur subunit) K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PAU_00743 fdoH2; putative formate dehydrogenase-o, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PAU_00742 gene0005; putative aerobic formate dehydrogenase-o subunit K00127 fdoI; formate dehydrogenase subunit gamma D PAU_04390 fdoI1; formate dehydrogenase, cytochrome b556(fdo) subunit (format dehydrogenase-o gamma subunit) (fdh-z gamma subunit) (aerobic format dehydrogenase cytochrome b556 subunit) K00127 fdoI; formate dehydrogenase subunit gamma D PAU_01354 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAU_00841 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAU_04239 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PAU_04048 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAU_01758 fbaB; fructose-biphosphate aldolase class i (fbp aldolase) K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PAU_00879 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAU_04051 fbp; fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase) K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAU_04264 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAU_01513 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PAU_01512 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PAU_00062 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAU_01902 ppsA; phosphoenolpyruvate synthase (pep synthase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PAU_02950 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAU_00529 gpmB; probable phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAU_01152 serA; d-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAU_02831 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAU_00520 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:pay00910] D PAU_03020 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D PAU_03235 Putative secreted protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_02090 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_00106 gdhA; nadp-specific glutamate dehydrogenase (nadp-gdh) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PAU_00179 glnA; glutamine synthetase (glutamate--ammonia ligase) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAU_03647 gltB; glutamate synthase [nadph] large chain (glutamate synthase alph subunit) (nadph-gogat) (glts alpha chain) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PAU_03648 gltD; glutamate synthase [nadph] small chain (glutamate synthase bet subunit) (nadph-gogat) (glts beta chain) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PAU_00092 cynS; cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D PAU_00801 yadF; similar to putative carbonic anhydrase yadf of escherichia coli K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D PAU_00820 similar to carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:pay00920] D PAU_01397 cysP; thiosulfate-binding protein cysp K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PAU_04263 sbp; sulfate-binding protein (sulfate starvation-induced protein 2) (ssi2) K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D PAU_01398 cysU; sulfate, thiosulfate transport system permease t protein (sulfat transport system permease t protein) K02046 cysU; sulfate/thiosulfate transport system permease protein D PAU_01399 cysW; sulfate transport system permease protein cysw K02047 cysW; sulfate/thiosulfate transport system permease protein D PAU_01400 cysA; sulfate/thiosulfate import ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PAU_00313 tauD; taurine dioxygenase, 2-oxoglutarate-dependent (taurine dioxygenase) K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D PAU_00683 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D PAU_00682 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PAU_00684 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PAU_04060 cysQ; protein cysq K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PAU_00679 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D PAU_00677 cysJ; sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D PAU_00678 cysI; sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D PAU_02916 sseA; 3-mercaptopyruvate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAU_00136 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D PAU_04345 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PAU_04333 wbqF; putative acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PAU_01405 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAU_03409 cysK1; putative cysteine synthase (putative pyridoxal-phosphate dependen protein) K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAU_01372 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAU_00409 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D PAU_04244 metB; cystathionine gamma-synthase (cgs) (o-succinylhomoserine (thiol) lyase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pay00061] D PAU_00660 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PAU_03706 accB; biotin carboxyl carrier protein of acetyl-coa carboxylase (bccp) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PAU_03707 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAU_02227 acetyl-coa carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAU_01453 accD; acetyl-coenzyme a carboxylase carboxyl transferase subunit bet (accase beta chain) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PAU_00440 biotin carboxylase/biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PAU_04155 conserved hypothetical protein K02078 acpP; acyl carrier protein D PAU_01705 acpP; acyl carrier protein (cytosolic activating factor) (caf) K02078 acpP; acyl carrier protein D PAU_02400 conserved hypothetical protein K02078 acpP; acyl carrier protein D PAU_00626 hypothetical protein K02078 acpP; acyl carrier protein D PAU_01703 fabD; malonyl coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAU_01702 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PAU_02401 conserved hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PAU_01438 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase i (beta-ketoacyl-ac synthase i) (kas i) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PAU_04156 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_01706 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase ii K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_02671 beta-ketoacyl synthase:phosphopantetheine binding K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_04158 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02901 conserved hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_01704 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_03776 short-chain dehydrogenase/reductase sdr K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02257 putative 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02747 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D PAU_00655 fabZ; (3r)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PAU_01942 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PAU_01099 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_02433 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pay00071] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_01416 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_03874 fadA; 3-ketoacyl-coa thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_02326 aco; conserved hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAU_00629 conserved hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D PAU_03261 Acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D PAU_01099 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_02433 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_03215 AAS bifunctional protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D PAU_02352 hcaD; similar to 3-phenylpropionate dioxygenase ferredoxin--nad(+) reductas component K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D PAU_03905 adhC; glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAU_02030 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAU_02881 yiaY; probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pay00561] D PAU_03725 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAU_03738 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D PAU_04257 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D PAU_03929 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D PAU_01701 plsX; fatty acid/phospholipid synthesis protein plsx K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PAU_03555 ygiH; upf0078 membrane protein ygih K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PAU_03525 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PAU_03928 dgkA; diacylglycerol kinase (dagk) (diglyceride kinase) (dgk) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:pay00564] D PAU_04346 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D PAU_00133 glpD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PAU_03929 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D PAU_03555 ygiH; upf0078 membrane protein ygih K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PAU_03525 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PAU_03928 dgkA; diacylglycerol kinase (dagk) (diglyceride kinase) (dgk) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D PAU_04110 pldB; lysophospholipase l2 K01048 pldB; lysophospholipase [EC:3.1.1.5] D PAU_03742 glpQ; glycerophosphodiester phosphodiesterase, periplasmi (glycerophosphodiester phosphodiesterase) K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PAU_03215 AAS bifunctional protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D PAU_01633 eutA; ethanolamine utilization protein euta K04019 eutA; ethanolamine utilization protein EutA D PAU_01632 eutB; ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D PAU_01631 eutC; ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D PAU_04265 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PAU_00650 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PAU_03189 pssA; cdp-diacylglycerol--serine o-phosphatidyltransferas (phosphatidylserine synthase) K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PAU_04090 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D PAU_02568 pgsA; phosphatidylglycerophosphate synthetase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D PAU_03480 Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D PAU_02039 cls; cardiolipin synthetase (cardiolipin synthase) (cl synthase) K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D PAU_01282 pcrB; conserved hypothetical protein K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:pay00600] D PAU_03084 chb; chitobiase (n-acetyl-beta-glucosaminidase)-beta-n acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:pay00592] D PAU_02326 aco; conserved hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAU_01416 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_03874 fadA; 3-ketoacyl-coa thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:pay01040] D PAU_02326 aco; conserved hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAU_00982 tesA; acyl-coa thioesterase i (protease i) (lysophospholipase l1 (lecithinase b) K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D PAU_03403 Acyl-CoA thioesterase II (TEII) K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PAU_02042 conserved hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pay00230] D PAU_03530 nudF; adp-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PAU_00078 nudE; conserved hypothetical protein K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D PAU_00515 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PAU_02994 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAU_02529 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAU_01457 purF; amidophosphoribosyltransferase (glutamine phosphoribosylpyrophosphat amidotransferase) (atase) (gpatase) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PAU_00405 purD; phosphoribosylglycinamide synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D PAU_04329 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PAU_01779 purN; phosphoribosylglycinamide formyltransferase 1 (gart) (ga transformylase) (5'-phosphoribosylglycinamide transformylase) K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PAU_01324 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D PAU_01780 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D PAU_00996 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D PAU_00997 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit (ai carboxylase) (airc) K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D PAU_01798 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D PAU_01735 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PAU_00406 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAU_03389 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PAU_03505 putative 5`-nucleotidase family protein precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PAU_00979 ushA; protein usha K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D PAU_00689 surE; multifunctional protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAU_02395 5'-nucleotidase SurE (nucleoside 5'-monophosphate phosphohydrolase) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAU_03380 Inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D PAU_00516 deoD; purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D PAU_03191 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PAU_00466 iunH; inosine-uridine preferring nucleoside hydrolase (iu-nucleosid hydrolase) (purine nucleosidase) K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D PAU_00798 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D PAU_01826 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PAU_01382 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAU_00528 yjjX; conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D PAU_03283 yggV HAM1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PAU_03220 Xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D PAU_01827 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PAU_00211 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D PAU_03174 nrdE; ribonucleoside-diphosphate reductase alpha-chain (ribonucleotid reductase r1 subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAU_01556 nrdA; ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAU_03175 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAU_01555 nrdB; ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid reductase 1) (b2 protein) (r2 protein) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAU_04002 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PAU_00828 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D PAU_01516 yfbR; 5'-nucleotidase yfbr K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D PAU_00209 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PAU_04146 gppA; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PAU_01776 ppx; exopolyphosphatase (exopolypase) (metaphosphatase) K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PAU_00831 relA; gtp pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D PAU_04124 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D PAU_04076 purA2; PurA, subunit of adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PAU_00736 purA1; adenylosuccinate synthetase 1 K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PAU_02155 add; adenosine deaminase (adenosine aminohydrolase) K01488 add; adenosine deaminase [EC:3.5.4.4] D PAU_01771 adenosine deaminase (adenosine aminohydrolase) K01488 add; adenosine deaminase [EC:3.5.4.4] D PAU_00611 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D PAU_03507 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D PAU_03383 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PAU_00832 mazG; conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PAU_03529 icc; icc protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D PAU_00565 apaH; bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D PAU_00684 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PAU_00683 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D PAU_00682 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PAU_02379 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D PAU_02380 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D PAU_02381 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:pay00240] D PAU_00562 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PAU_00561 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PAU_03999 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PAU_04000 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PAU_02698 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PAU_02759 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D PAU_04377 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PAU_02082 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PAU_00646 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PAU_01382 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAU_00832 mazG; conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PAU_03700 yhdE; conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PAU_00840 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D PAU_02829 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PAU_02890 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D PAU_03505 putative 5`-nucleotidase family protein precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PAU_00979 ushA; protein usha K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D PAU_00689 surE; multifunctional protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAU_02395 5'-nucleotidase SurE (nucleoside 5'-monophosphate phosphohydrolase) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAU_00466 iunH; inosine-uridine preferring nucleoside hydrolase (iu-nucleosid hydrolase) (purine nucleosidase) K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D PAU_03888 udp; uridine phosphorylase (udrpase) K00757 udp; uridine phosphorylase [EC:2.4.2.3] D PAU_01781 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PAU_02369 conserved hypothetical protein K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PAU_03507 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D PAU_03910 yeiC; putative kinase K16328 psuK; pseudouridine kinase [EC:2.7.1.83] D PAU_03909 conserved hypothetical protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D PAU_02361 conserved hypothetical protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D PAU_00611 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D PAU_02895 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D PAU_04002 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PAU_02889 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D PAU_03174 nrdE; ribonucleoside-diphosphate reductase alpha-chain (ribonucleotid reductase r1 subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAU_01556 nrdA; ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAU_03175 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAU_01555 nrdB; ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid reductase 1) (b2 protein) (r2 protein) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAU_01516 yfbR; 5'-nucleotidase yfbr K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D PAU_01709 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D PAU_00851 tmk; similarities with thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D PAU_04375 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PAU_00514 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D PAU_02029 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D PAU_00582 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PAU_00991 Bacterial luciferase-similar to putative monooxygenase ycdm of escherichia coli K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46] D PAU_02186 ydfG; nadp-dependent l-serine/l-allo-threonine dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pay00250] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAU_01298 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PAU_01978 ansA; l-asparaginase i (l-asparagine amidohydrolase i) (l-asnase i) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAU_02834 ansB; l-asparaginase ii (l-asparagine amidohydrolase ii) (l-asnase ii (colaspase) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAU_00048 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D PAU_02262 wbmC; conserved hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAU_04336 wbfR; asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAU_01517 yfbQ; putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PAU_03760 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D PAU_04235 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAU_04067 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAU_04234 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAU_04076 purA2; PurA, subunit of adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PAU_00736 purA1; adenylosuccinate synthetase 1 K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PAU_01735 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PAU_03999 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PAU_04000 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PAU_01177 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAU_00927 gabD; succinate-semialdehyde dehydrogenase, nadp-dependent activit (succinate-semialdehyde dehydrogenase) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAU_03647 gltB; glutamate synthase [nadph] large chain (glutamate synthase alph subunit) (nadph-gogat) (glts alpha chain) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PAU_03648 gltD; glutamate synthase [nadph] small chain (glutamate synthase bet subunit) (nadph-gogat) (glts beta chain) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PAU_00106 gdhA; nadp-specific glutamate dehydrogenase (nadp-gdh) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PAU_02606 putA; proline dehydrogenase (proline oxidase)/delta-1-pyrroline-5 carboxylate dehydrogenase (p5c dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PAU_00179 glnA; glutamine synthetase (glutamate--ammonia ligase) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAU_00562 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PAU_00561 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PAU_03288 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D PAU_00033 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAU_01457 purF; amidophosphoribosyltransferase (glutamine phosphoribosylpyrophosphat amidotransferase) (atase) (gpatase) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pay00260] D PAU_03933 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAU_00533 thrA; aspartokinase i-homoserine dehydrogenase i K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PAU_04243 metL; aspartokinase ii and homoserine dehydrogenase ii (aspartokinase ii homoserine dehydrogenase ii) K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PAU_00005 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAU_00534 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D PAU_00535 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PAU_01354 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAU_02507 ycdW; similar to probable 2-hydroxyacid dehydrogenase ycdw of escherichi coli K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAU_03725 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PAU_02950 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAU_00529 gpmB; probable phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAU_01152 serA; d-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAU_02831 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAU_00520 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PAU_02186 ydfG; nadp-dependent l-serine/l-allo-threonine dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D PAU_04352 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PAU_04351 tdh; l-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D PAU_01161 gcvP; glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAU_01159 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_01160 gcvH; glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein D PAU_00111 l-arginine:lysine amidinotransferase, putative K00613 GATM; glycine amidinotransferase [EC:2.1.4.1] D PAU_03189 pssA; cdp-diacylglycerol--serine o-phosphatidyltransferas (phosphatidylserine synthase) K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PAU_01173 ydcW; putative betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D PAU_00518 mtcB; similar to cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D PAU_00517 similar to cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D PAU_01839 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PAU_04161 ilvA; threonine dehydratase biosynthetic (threonine deaminase) K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAU_02598 dsdA; d-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D PAU_02050 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PAU_02051 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:pay00270] D PAU_04345 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PAU_04333 wbqF; putative acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PAU_01405 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAU_03409 cysK1; putative cysteine synthase (putative pyridoxal-phosphate dependen protein) K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAU_01372 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAU_00517 similar to cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D PAU_03516 metC; cystathionine beta-lyase (chl) (beta-cystathionase) (cysteine lyase) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAU_03029 orf3; conserved hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAU_00518 mtcB; similar to cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D PAU_03891 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PAU_01087 metK; s-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PAU_02393 mat; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PAU_00794 speD; s-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PAU_00795 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D PAU_00827 mtnA; methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D PAU_03191 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PAU_03911 tyrB; aromatic-amino-acid aminotransferase (aroat) (arat) K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PAU_01852 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D PAU_04300 cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_04299 dna-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_03208 luxS; s-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D PAU_03933 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAU_00533 thrA; aspartokinase i-homoserine dehydrogenase i K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PAU_04243 metL; aspartokinase ii and homoserine dehydrogenase ii (aspartokinase ii homoserine dehydrogenase ii) K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PAU_00005 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAU_00409 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D PAU_04244 metB; cystathionine gamma-synthase (cgs) (o-succinylhomoserine (thiol) lyase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PAU_01242 metY; o-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D PAU_04163 ilvE; branched-chain amino acid aminotransferase (transaminase b) (bcat) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAU_03209 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D PAU_03276 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAU_02916 sseA; 3-mercaptopyruvate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAU_04048 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAU_01839 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PAU_01401 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D PAU_01152 serA; d-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAU_02831 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pay00280] D PAU_04163 ilvE; branched-chain amino acid aminotransferase (transaminase b) (bcat) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAU_02673 similar to 3-methyl-2-oxobutanoate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_00629 conserved hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_01416 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_03874 fadA; 3-ketoacyl-coa thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_00440 biotin carboxylase/biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PAU_02709 putative methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAU_02208 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pay00290] D PAU_04161 ilvA; threonine dehydratase biosynthetic (threonine deaminase) K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAU_01095 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PAU_01094 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PAU_01096 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D PAU_04165 ilvG; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAU_01101 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAU_01102 ilvH; acetolactate synthase isozyme iii small subunit (ahas-iii (acetohydroxy-acid synthase iii small subunit) (als-iii) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAU_04164 ilvM; acetolactate synthase isozyme ii small subunit (ahas-ii (acetohydroxy-acid synthase ii small subunit) (als-ii) K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PAU_04148 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PAU_04162 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PAU_04163 ilvE; branched-chain amino acid aminotransferase (transaminase b) (bcat) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAU_00225 avtA; alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase transaminase c (valine-pyruvate transaminase) K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D PAU_01517 yfbQ; putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PAU_01097 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pay00300] D PAU_03933 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAU_00533 thrA; aspartokinase i-homoserine dehydrogenase i K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PAU_04243 metL; aspartokinase ii and homoserine dehydrogenase ii (aspartokinase ii homoserine dehydrogenase ii) K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PAU_00005 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAU_01796 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAU_00560 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D PAU_00641 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D PAU_00305 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PAU_01817 dapE; n-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PAU_04121 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PAU_00630 speC; conserved hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PAU_03269 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PAU_01108 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PAU_01109 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:pay00310] D PAU_02973 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarat dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_00927 gabD; succinate-semialdehyde dehydrogenase, nadp-dependent activit (succinate-semialdehyde dehydrogenase) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAU_03709 conserved hypothetical Protein K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D PAU_01904 conserved hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D PAU_01020 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D PAU_01019 atoA; acetate coa-transferase beta subunit (acetyl-coa:acetoacetate co transferase beta subunit) K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:pay00220] D PAU_03997 argI; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PAU_04235 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAU_04067 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAU_04234 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAU_00371 rocF; arginase/agmatinase/formimionoglutamate hydrolase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D PAU_02379 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D PAU_02380 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D PAU_02381 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D PAU_03288 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D PAU_00179 glnA; glutamine synthetase (glutamate--ammonia ligase) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAU_00106 gdhA; nadp-specific glutamate dehydrogenase (nadp-gdh) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAU_01517 yfbQ; putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PAU_00593 argA; amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D PAU_04236 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D PAU_04237 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D PAU_00305 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PAU_04238 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:pay00330] D PAU_00111 l-arginine:lysine amidinotransferase, putative K00613 GATM; glycine amidinotransferase [EC:2.1.4.1] D PAU_01321 adiA; biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D PAU_01088 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D PAU_01089 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D PAU_00795 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D PAU_00794 speD; s-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAU_02887 conserved hypothetical protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D PAU_01778 speG; spermidine n1-acetyltransferase (diamine acetyltransferase) K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D PAU_01498 astA; arginine n-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D PAU_01500 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D PAU_01497 argM; succinylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D PAU_01499 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D PAU_01501 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D PAU_01179 fad dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D PAU_00468 ordL; probable oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D PAU_00371 rocF; arginase/agmatinase/formimionoglutamate hydrolase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D PAU_03281 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PAU_02606 putA; proline dehydrogenase (proline oxidase)/delta-1-pyrroline-5 carboxylate dehydrogenase (p5c dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PAU_03218 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PAU_03217 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D PAU_01844 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:pay00340] D PAU_02873 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PAU_02880 hisI; histidine biosynthesis bifunctional protein K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D PAU_02878 hisA1; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PAU_00739 hisA2; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino imidazole-4-carboxamide isomerase 2 K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D PAU_02877 hisH; imidazole glycerol phosphate synthase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PAU_02879 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PAU_02876 hisB; histidine biosynthesis bifunctional protein K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D PAU_02875 hisCD; putative histidine biosynthesis bifunctional protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_00616 hisC; conserved hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_02874 hisCD; putative histidine biosynthesis bifunctional protein K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D PAU_01424 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D PAU_01423 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D PAU_01420 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D PAU_01421 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D PAU_02211 hdc; histidine decarboxylase (fragment) K01590 hdc; histidine decarboxylase [EC:4.1.1.22] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:pay00350] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAU_02875 hisCD; putative histidine biosynthesis bifunctional protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_00616 hisC; conserved hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_03911 tyrB; aromatic-amino-acid aminotransferase (aroat) (arat) K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PAU_00470 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D PAU_03905 adhC; glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAU_02030 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAU_02881 yiaY; probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PAU_00189 hpaB; 4-hydroxyphenylacetate 3-monooxygenase oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D PAU_00478 similar to 4-hydroxyphenylacetate 3-monooxygenase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D PAU_00910 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component (4-hpa 3 monooxygenase large component) (4-hpa 3-hydroxylase) K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D PAU_00909 hpaC; 4-hydroxyphenylacetic acid hydroxylase putative coupling protein K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D PAU_00930 hpaD; homoprotocatechuate dyoxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D PAU_00931 hpaE; 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D PAU_00929 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D PAU_00932 hpaG2; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D PAU_00933 hpaG1; homoprotocatechuate catabolism bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D PAU_00926 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase (2-oxo-hept-4-ene-1,7-dioat hydratase) K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D PAU_00925 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D PAU_00927 gabD; succinate-semialdehyde dehydrogenase, nadp-dependent activit (succinate-semialdehyde dehydrogenase) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:pay00360] D PAU_00470 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D PAU_02454 putative 3-hydroxyacyl-coa dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAU_02875 hisCD; putative histidine biosynthesis bifunctional protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_00616 hisC; conserved hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_03911 tyrB; aromatic-amino-acid aminotransferase (aroat) (arat) K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PAU_01644 conserved hypothetical protein K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D PAU_01970 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D PAU_02187 histidine ammonia-lyase K10775 PAL; phenylalanine ammonia-lyase [EC:4.3.1.24] D PAU_02357 hcaE; 3-phenylpropionate dioxygenase alpha subunit (digoxigenin alph subunit) K05708 hcaE; 3-phenylpropionate/trans-cinnamate dioxygenase subunit alpha [EC:1.14.12.19] D PAU_02356 hcaF; 3-phenylpropionate dioxygenase beta subunit (digoxigenin bet subunit) K05709 hcaF; 3-phenylpropionate/trans-cinnamate dioxygenase subunit beta [EC:1.14.12.19] D PAU_02355 hcaC; 3-phenylpropionate dioxygenase ferredoxin subunit (digoxigeni ferredoxin subunit) K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D PAU_02352 hcaD; similar to 3-phenylpropionate dioxygenase ferredoxin--nad(+) reductas component K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D PAU_02354 hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase K05711 hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase [EC:1.3.1.87] D PAU_02254 putative oxygenase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D PAU_02353 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D PAU_02359 ohpC; conserved hypothetical protein K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] C 00380 Tryptophan metabolism [PATH:pay00380] D PAU_02973 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarat dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAU_03235 Putative secreted protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_02090 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_01545 katE; catalase; hydroperoxidase hpii(iii) K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pay00400] D PAU_03199 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAU_01900 aroH; phospho2-dehydro-3-deoxyheptonate aldolase, trp-sensitive (3-deoxy-d arabinoheptulosonate 7-phosphate synthase) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAU_02951 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAU_00071 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PAU_03705 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D PAU_04173 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PAU_03216 Shikimate kinase 2 K00891 aroK; shikimate kinase [EC:2.7.1.71] D PAU_00072 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71] D PAU_02830 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PAU_01427 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PAU_02055 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PAU_02054 trpG; anthranilate synthase component ii (glutamine amido-transferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PAU_02053 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D PAU_00739 hisA2; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino imidazole-4-carboxamide isomerase 2 K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D PAU_02052 trpC; tryptophan biosynthesis protein trpcf K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D PAU_02050 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PAU_02051 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PAU_03198 tyrA; chorismate mutase-t and prephenate dehydrogenase (chorismate mutase-/prephenate dehydrogenase) K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D PAU_03195 pheA; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAU_02875 hisCD; putative histidine biosynthesis bifunctional protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_00616 hisC; conserved hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_03911 tyrB; aromatic-amino-acid aminotransferase (aroat) (arat) K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pay00410] D PAU_00804 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PAU_01177 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAU_00805 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PAU_02208 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_02326 aco; conserved hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D PAU_02709 putative methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:pay00430] D PAU_03499 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAU_00313 tauD; taurine dioxygenase, 2-oxoglutarate-dependent (taurine dioxygenase) K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D PAU_01512 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PAU_01513 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:pay00450] D PAU_04244 metB; cystathionine gamma-synthase (cgs) (o-succinylhomoserine (thiol) lyase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PAU_03516 metC; cystathionine beta-lyase (chl) (beta-cystathionase) (cysteine lyase) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAU_03029 orf3; conserved hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAU_03891 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PAU_00517 similar to cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D PAU_01911 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D PAU_02846 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PAU_00683 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D PAU_00682 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PAU_01981 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D PAU_04385 selA; L-seryl-tRNA(sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D PAU_02892 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pay00460] D PAU_03235 Putative secreted protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_02090 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_03499 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAU_01978 ansA; l-asparaginase i (l-asparagine amidohydrolase i) (l-asnase i) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAU_02834 ansB; l-asparaginase ii (l-asparagine amidohydrolase ii) (l-asnase ii (colaspase) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAU_00048 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D PAU_01354 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAU_03020 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:pay00470] D PAU_03912 alr; alanine racemase) K01775 alr; alanine racemase [EC:5.1.1.1] D PAU_01971 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D PAU_01115 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAU_03288 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D PAU_04226 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PAU_01111 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PAU_02598 dsdA; d-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D PAU_04121 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PAU_00630 speC; conserved hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PAU_03269 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PAU_02148 conserved hypothetical protein K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D PAU_02145 probable oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-] D PAU_02147 conserved hypothetical protein K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-] D PAU_02146 conserved hypothetical protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma D PAU_02152 yjhH; dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D PAU_02153 probable aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D PAU_01970 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:pay00480] D PAU_03499 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAU_00442 lamb/ycsf K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D PAU_03209 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D PAU_03276 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D PAU_03985 pepA; probable cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PAU_01369 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D PAU_02761 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PAU_03221 Aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D PAU_01940 gst; glutathione s-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAU_02871 yliJ; similar to glutathione s-transferase ylij of escherichia coli K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAU_00291 gor; glutathione oxidoreductase (gr) (grase) K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D PAU_01740 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAU_02885 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PAU_02443 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAU_00795 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:pay00511] D PAU_03084 chb; chitobiase (n-acetyl-beta-glucosaminidase)-beta-n acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:pay00540] D PAU_00656 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D PAU_01119 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D PAU_00654 lpxD; udp-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D PAU_00998 lpxH; udp-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D PAU_00657 lpxB; lipid-A-disaccharide synthase) K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D PAU_02818 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D PAU_03674 kdsD; arabinose 5-phosphate isomerase) K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D PAU_02522 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D PAU_03675 kdsC; 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D PAU_02816 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D PAU_04360 kdtA; 3-deoxy-d-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D PAU_02703 htrB; lipid a biosynthesis lauroyl acyltransferase (heat shock protein b) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D PAU_02464 msbB; lipid A biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D PAU_01673 similar to putative membrane protein yeiu of escherichia coli K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D PAU_01754 crcA; crca protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D PAU_01879 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosy transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D PAU_03260 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D PAU_03547 hldE; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D PAU_00670 gmhB; d,d-heptose 1,7-bisphosphate phosphatase 1 K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D PAU_04353 hldD; ADP-L-glycero-d-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D PAU_04355 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D PAU_04354 rfaF; adp-heptose--LPS heptosyltransferase II involved in lipopolysaccharid core biosynthesis K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D PAU_04357 putative LPS biosynthesis enzyme (lipopolysaccharide core biosynthesi protein rfaq) K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D PAU_00465 yibD; similar to glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D PAU_04358 rfaG; lipopolysaccharide core biosynthesis protein rfag (glucosyltransferas i) K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D PAU_00363 rfaB; lipopolysaccharide 1,6-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] D PAU_04364 rfaL; lipid a-core:surface polymer ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:pay00542] D PAU_04142 wecA; undecaprenyl-phosphate alpha-n-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pay00541] D PAU_02025 galU; utp--glucose-1-phosphate uridylyltransferase (udp-glucos pyrophosphorylase) (udpgp) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAU_04343 galE; udp-glucose 4-epimerase (galactowaldenase) (udp-galactose 4 epimerase) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAU_02026 ugd; putative udp-glucose dehydrogenase (putative nucleotide suga dehydrogenase) K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PAU_02027 wbnF; Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PAU_04137 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAU_04326 wblO; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAU_04138 rffG; dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PAU_04135 wecE; lipopolysaccharide biosynthesis protein wece K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D PAU_04136 lipopolysaccharide biosynthesis protein rffc K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D PAU_04327 vioA; aminotransferase, degt/dnrj/eryc1/strs family K20429 vioA; dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [EC:2.6.1.33] D PAU_02157 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PAU_02392 conserved hypothetical protein K13010 per; perosamine synthetase [EC:2.6.1.102] D PAU_00034 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PAU_04140 wecB; udp-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PAU_04139 wecC; udp-n-acetyl-d-mannosaminuronic acid dehydrogenase (udp-mannac dehydrogenase) K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D PAU_04323 wblM; polysaccharide biosynthesis protein capd K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D PAU_04342 wbgZ; polysaccharide biosynthesis protein capd K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D PAU_04340 wbfT; nad-dependent epimerase/dehydratase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] D PAU_04311 udg; similar to udp-glucose/gdp-mannose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D PAU_04337 gna; udp-n-acetyl-d-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D PAU_04312 wblB; probable dehydrogenase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D PAU_04314 wblD; cys/met metabolism pyridoxal-phosphate-dependen enzymes:degt/dnrj/eryc1/strs aminotransferase:aromatic amino aci beta-eliminating lyase/threonine aldolase:aminotransferase, class and ii K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D PAU_04313 wblC; acetyltransferases (the isoleucine patch superfamily) K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D PAU_04319 wblH; similar to udp-n-acetylglucosamine 2-epimerase (probable udp-n acetylglucosamine 2-epimerase wbpi) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D PAU_04338 wbpP; putative nad-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:pay00550] D PAU_03665 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAU_00633 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAU_04225 murB; udp-n-acetylenolpyruvoylglucosamine reductase (ec 1.1.1.158) K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PAU_01114 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PAU_01111 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PAU_01108 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PAU_01115 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAU_01109 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PAU_00649 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PAU_03553 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAU_02865 ybjG; hypothetical membrane protein ybjg (hypothetical protein ecs0921) K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAU_01110 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PAU_01113 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide pyrophosphoryl-undecaprenol n-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PAU_03642 mtgA; mtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PAU_00077 mrcA; penicillin-binding protein 1a (pbp-1a) (pbp1a) (penicillin-bindin protein a) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PAU_00814 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PAU_01381 pbpC; penicillin-binding protein 1c K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D PAU_03162 pbpA; cell elongation, e phase; peptidoglycan synthetase; penicillin-bindin protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAU_01107 ftsI; peptidoglycan synthetase ftsi (penicillin-binding protein 3) (pbp-3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAU_02870 dacC; penicillin-binding protein 6 (d-alanyl-d-alanine carboxypeptidas fraction c) (dd-pept (dd-carboxypeptidase) (pbp-6)idase) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAU_03165 dacA; penicillin-binding protein 5 precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAU_04040 dacB; penicillin-binding protein 4 (pbp-4) [includes: d-alanyl-d-alanin carboxypeptidase (dd-peptidase) (dd-carboxypeptidase); d-alanyl-d alanine-endopeptidase (dd-endopeptidase)] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:pay00552] D PAU_03553 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAU_02865 ybjG; hypothetical membrane protein ybjg (hypothetical protein ecs0921) K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAU_04142 wecA; undecaprenyl-phosphate alpha-n-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAU_04323 wblM; polysaccharide biosynthesis protein capd K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D PAU_04342 wbgZ; polysaccharide biosynthesis protein capd K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pay00543] D PAU_01288 conserved hypothetical protein K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D PAU_04142 wecA; undecaprenyl-phosphate alpha-n-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAU_04131 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D PAU_04133 wecF; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D PAU_04345 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PAU_04333 wbqF; putative acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pay00730] D PAU_00394 thiC; thiamine biosynthesis protein thic K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D PAU_01757 thiD; phosphomethylpyrimidine kinase (hmp-phosphate kinase) K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D PAU_00392 thiF; 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D PAU_01362 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_00158 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_04154 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_03436 Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PAU_00389 thiH; thiamin biosynthesis, thiazole moiety (thiamin biosynthesis protei thih) K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D PAU_01180 forZ; fortimicin a n-forimidoyltransferase K03153 thiO; glycine oxidase [EC:1.4.3.19] D PAU_03439 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PAU_00390 thiG; thiazole biosynthesis protein thig K03149 thiG; thiazole synthase [EC:2.8.1.10] D PAU_00393 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PAU_03481 Thiamine-monophosphate kinase (Thiamine-phosphate kinase) K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D PAU_04089 yjeQ; conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PAU_00480 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAU_01714 thiK; conserved hypothetical protein K07251 thiK; thiamine kinase [EC:2.7.1.89] D PAU_03383 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pay00740] D PAU_02078 ribA; gtp cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAU_02346 ribA; gtp cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAU_03484 Riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PAU_04118 yigB; conserved hypothetical protein K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D PAU_03536 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase (dhbp synthase) K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D PAU_03483 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PAU_01922 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PAU_00994 Lumazine binding protein, similar to riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PAU_00554 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D PAU_00909 hpaC; 4-hydroxyphenylacetic acid hydroxylase putative coupling protein K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D PAU_03875 fre; nad(p)h-flavin reductase (nad(p)h:flavin oxidoreductase) K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D PAU_03550 nfsA; subunit of oxygen-insensitive NADPH nitroreductase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] D PAU_03530 nudF; adp-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PAU_01738 ymfB; conserved hypothetical protein K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D PAU_01458 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:pay00750] D PAU_01937 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D PAU_01939 pdxY; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D PAU_00877 epd; d-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D PAU_01449 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D PAU_02831 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAU_00568 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D PAU_01308 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D PAU_00535 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:pay00760] D PAU_01298 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PAU_02953 nadA; quinolinate synthetase a K03517 nadA; quinolinate synthase [EC:2.5.1.72] D PAU_01130 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PAU_02762 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PAU_00516 deoD; purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D PAU_00522 nadR; transcriptional regulator nadr K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D PAU_03505 putative 5`-nucleotidase family protein precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PAU_00979 ushA; protein usha K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D PAU_00689 surE; multifunctional protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAU_02395 5'-nucleotidase SurE (nucleoside 5'-monophosphate phosphohydrolase) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAU_03159 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D PAU_00832 mazG; conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PAU_00399 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D PAU_01329 nadE; nh(3)-dependent nad+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D PAU_03213 Putative competence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D PAU_01977 ydjB; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D PAU_01729 cobB; cobb protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D PAU_01274 ppnK; probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D PAU_04232 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D PAU_02398 pntA; nad(p) transhydrogenase subunit alpha (pyridine nucleotid transhydrogenase subunit alpha) (nicotinamide nucleotid transhydrogenase subunit alpha) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D PAU_02397 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D PAU_00927 gabD; succinate-semialdehyde dehydrogenase, nadp-dependent activit (succinate-semialdehyde dehydrogenase) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:pay00770] D PAU_04165 ilvG; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAU_01101 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAU_01102 ilvH; acetolactate synthase isozyme iii small subunit (ahas-iii (acetohydroxy-acid synthase iii small subunit) (als-iii) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAU_04164 ilvM; acetolactate synthase isozyme ii small subunit (ahas-ii (acetohydroxy-acid synthase ii small subunit) (als-ii) K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PAU_04148 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PAU_04162 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PAU_00806 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D PAU_03434 2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PAU_00805 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PAU_04223 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D PAU_04374 dfp; coenzyme A biosynthesis bifunctional protein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PAU_00832 mazG; conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PAU_04362 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PAU_01126 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PAU_01309 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D PAU_03492 Acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D PAU_04163 ilvE; branched-chain amino acid aminotransferase (transaminase b) (bcat) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAU_00804 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:pay00780] D PAU_02938 bioC; biotin biosynthesis; reaction prior to pimeloyl coa (putative enzym bioc) K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D PAU_01438 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase i (beta-ketoacyl-ac synthase i) (kas i) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PAU_04156 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_01706 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase ii K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_02671 beta-ketoacyl synthase:phosphopantetheine binding K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_04158 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02901 conserved hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_01704 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_03776 short-chain dehydrogenase/reductase sdr K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02257 putative 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_00655 fabZ; (3r)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PAU_01942 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PAU_00148 bioH; carboxylesterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D PAU_02939 bioF; 7-keto-8-amino pelargonic acid synthetase (8-amino-7-oxononanoat synthase) K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PAU_01182 aminotransferase, class II K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PAU_02941 bioA; 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PAU_02183 ynfK; putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D PAU_02937 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D PAU_02940 bioB; biotin synthetase (biotin synthase) K01012 bioB; biotin synthase [EC:2.8.1.6] D PAU_04224 birA; bifunctional protein [includes: biotin operon repressor; biotin [acetyl-coa-carboxylase] synthetase (biotin-protein ligase)] K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pay00785] D PAU_03167 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D PAU_03168 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_01138 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PAU_01139 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenas complex (e2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAU_02974 sucA; 2-oxoglutarate dehydrogenase e1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PAU_02973 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarat dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAU_02673 similar to 3-methyl-2-oxobutanoate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D PAU_01161 gcvP; glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAU_01159 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAU_01160 gcvH; glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pay00790] D PAU_02899 folE; FolE subunit of GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D PAU_00480 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAU_02473 nudB; datp pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D PAU_03554 folB; dihydroneopterin aldolase (dhna) K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D PAU_00807 folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D PAU_04034 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D PAU_00564 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PAU_01454 folC; Folylpolyglutamate synthase-folc bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D PAU_02078 ribA; gtp cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAU_02346 ribA; gtp cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAU_00304 pabA; para-aminobenzoate synthase glutamine amidotransferase, component ii K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D PAU_01841 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D PAU_01184 similar to p-aminobenzoic acid synthase K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D PAU_01707 pabC; 4-amino-4-deoxychorismate lyase (adc lyase) (adcl) K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D PAU_00676 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PAU_00675 ygcF; conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PAU_03410 Queuosine biosynthesis protein queC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PAU_00612 queF; conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PAU_01378 conserved hypothetical protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D PAU_02934 moaA; molybdenum cofactor biosynthesis protein a K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PAU_01228 pqqE-4; coenzyme pqq synthesis protein e (pqqe-4) K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PAU_02933 moaC; molybdenum cofactor biosynthesis protein c K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PAU_02931 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PAU_00539 mog; molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D PAU_02902 moeA; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PAU_00296 mobA; molybdopterin-guanine dinucleotide biosynthesis protein a K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:pay00670] D PAU_00564 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PAU_01002 folD; bifunctional protein fold K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PAU_01354 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAU_04329 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PAU_01779 purN; phosphoribosylglycinamide formyltransferase 1 (gart) (ga transformylase) (5'-phosphoribosylglycinamide transformylase) K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PAU_00406 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAU_04178 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PAU_01159 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAU_00582 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PAU_02022 purU; formyltetrahydrofolate deformylase (formyl-fh(4) hydrolase) K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PAU_04242 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D PAU_01153 ygfA; conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pay00860] D PAU_01411 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAU_02526 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D PAU_00822 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PAU_03878 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PAU_04125 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D PAU_04126 hemD; uroporphyrinogen-iii synthase (uros) (uroporphyrinogen-ii cosynthetase) (hydroxymethylbilane hydrolyase [cyclizing]) K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D PAU_00400 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D PAU_01393 hemF; coproporphyrinogen 3 oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D PAU_00175 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D PAU_03869 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D PAU_03382 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D PAU_04127 hemX; uroporphyrin-iii c-methyltransferase (urogen iii methylase) K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D PAU_00681 cysG; sirohaem synthase-uroporphyrinogen III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D PAU_01634 cysG; siroheme synthase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D PAU_03431 cyoE; Protoheme IX farnesyltransferase (Heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141] D PAU_01611 cbiK; sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D PAU_01612 cbiL; precorrin-2 c20-methyltransferase (s-adenosyl-l-methionine--precorrin 2 methyltransferase) (sp2mt) K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D PAU_01609 cbiH; precorrin-3b c17-methyltransferase (precorrin-3 methyltransferase (precorrin-3 methylase) K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D PAU_01607 cbiF; precorrin-4 c11-methyltransferase (precorrin-3-methylase) K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D PAU_01608 cbiG; cobalamin biosynthesis protein g (cbig) K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D PAU_01610 cbiJ; cobalt-precorrin-6a reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D PAU_01604 cbiD; putative cobalt-precorrin-6A synthase [deacetylating] K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D PAU_01606 cbiT; precorrin-8w decarboxylase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D PAU_01605 cbiE; synthesis of vitamin b12 adenosyl cobalamide K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D PAU_01603 cbiC; precorrin-8x methylmutase (precorrin isomerase) K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D PAU_01601 cbiA; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D PAU_01638 btuR; cob(i)alamin adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PAU_02066 btuR; cob(i)alamin adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PAU_01613 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D PAU_01602 cobD; cobalamin biosynthesis protein cobd K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D PAU_01614 cobU; bifunctional cobalamin biosynthesis protein cobu K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D PAU_01615 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D PAU_01618 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D PAU_01617 cobC; alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D PAU_01636 pduX; conserved hypothetical protein K16651 pduX; L-threonine kinase [EC:2.7.1.177] D PAU_01635 cobD; threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D PAU_04218 bfr; bacterioferritin (bfr) (cytochrome b-1) (cytochrome b-557) K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pay00130] D PAU_03931 ubiC; chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D PAU_03930 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PAU_03876 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D PAU_01458 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAU_01158 visC; conserved hypothetical protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D PAU_01557 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D PAU_01157 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D PAU_03884 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D PAU_03144 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase ubif K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D PAU_00892 phbC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D PAU_01538 menD; menaquinone biosynthesis protein mend K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D PAU_01539 conserved hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D PAU_01541 menC; o-succinylbenzoate-coa synthase (osb synthase) (4-(2'-carboxyphenyl) 4-oxybutyric acid synthase) K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D PAU_01542 menE; o-succinylbenzoic acid--coa ligase (osb-coa synthetase) (o succinylbenzoate-coa synthase) K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D PAU_01540 menB; naphthoate synthase (dihydroxynaphthoic acid synthetase) (dhn synthetase) K01661 menB; naphthoate synthase [EC:4.1.3.36] D PAU_01905 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D PAU_04252 menA; 1,4-dihydroxy-2-naphthoate--> dimethylmenaquinone (1,4-dihydroxy-2 naphthoate octaprenyltransferase) K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D PAU_02604 wrbA; flavoprotein wrba (trp repressor-binding protein) K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pay00900] D PAU_03439 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PAU_00648 dxr; 1-deoxy-d-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D PAU_00686 ispD; 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D PAU_02528 ispE; 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D PAU_00687 ispF; 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D PAU_01386 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D PAU_00559 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_02226 probable hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D PAU_04010 similarities with 3-hydroxy-3-methylglutaryl coenzyme a reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D PAU_01458 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAU_03622 idi2; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D PAU_01283 idi; isopentenyl-diphosphate delta-isomerase 1 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D PAU_03438 Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PAU_04044 ispB; octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PAU_00649 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:pay00907] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_01416 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_03874 fadA; 3-ketoacyl-coa thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PAU_00868 tktA; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pay00523] D PAU_04137 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAU_04326 wblO; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAU_04138 rffG; dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:pay01053] D PAU_00892 phbC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D PAU_00894 phbB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D PAU_00895 phbA; 2,3-dihydro-2,3-dihydroxybenzoate K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D PAU_00970 ngrA; 4'-phosphopantetheinyl tranferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D PAU_00893 phbE; enterobactin synthetase component e K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D PAU_00883 phbG; putative photobactin biosynthesis protein phbg K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D PAU_02306 ybtE; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D PAU_02302 conserved hypothetical protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D PAU_02304 similar to irp3 protein of yersinia enterocolitica K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component D PAU_02303 irp1_HMWP1; putative peptide/polyketide synthetase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase C 01055 Biosynthesis of vancomycin group antibiotics D PAU_04138 rffG; dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D PAU_02294 blaA; ctx-m type extended-spectrum beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:pay00332] D PAU_03218 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PAU_03217 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:pay00261] D PAU_00683 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D PAU_00682 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PAU_03933 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAU_00533 thrA; aspartokinase i-homoserine dehydrogenase i K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PAU_04243 metL; aspartokinase ii and homoserine dehydrogenase ii (aspartokinase ii homoserine dehydrogenase ii) K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PAU_00005 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAU_01796 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAU_00560 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pay00521] D PAU_01412 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PAU_02994 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAU_02129 conserved hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PAU_02396 conserved hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PAU_01359 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAU_02131 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAU_00849 conserved hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAU_02711 idhA; putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D PAU_04137 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAU_04326 wblO; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAU_04138 rffG; dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D PAU_01412 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:pay00525] D PAU_04137 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAU_04326 wblO; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAU_04138 rffG; dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:pay00401] D PAU_03198 tyrA; chorismate mutase-t and prephenate dehydrogenase (chorismate mutase-/prephenate dehydrogenase) K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAU_02875 hisCD; putative histidine biosynthesis bifunctional protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_00616 hisC; conserved hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_03911 tyrB; aromatic-amino-acid aminotransferase (aroat) (arat) K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D PAU_02055 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PAU_02054 trpG; anthranilate synthase component ii (glutamine amido-transferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D PAU_01703 fabD; malonyl coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAU_04158 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02901 conserved hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_01704 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_03776 short-chain dehydrogenase/reductase sdr K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02257 putative 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_01942 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D PAU_04155 conserved hypothetical protein K02078 acpP; acyl carrier protein D PAU_01705 acpP; acyl carrier protein (cytosolic activating factor) (caf) K02078 acpP; acyl carrier protein D PAU_02400 conserved hypothetical protein K02078 acpP; acyl carrier protein D PAU_00626 hypothetical protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:pay00999] D PAU_01087 metK; s-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PAU_02393 mat; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PAU_04173 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites [PATH:pay00997] D PAU_01721 pvcA; similar to pyoverdine biosynthesis protein pvca of pseudomona aeruginosa K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24] D PAU_01720 pvcB; similar to pyoverdine biosynthesis protein pvcb of pseudomona aeruginosa K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pay00362] D PAU_01416 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_03874 fadA; 3-ketoacyl-coa thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_00241 conserved hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PAU_02368 conserved hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PAU_03771 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_02454 putative 3-hydroxyacyl-coa dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:pay00627] D PAU_03843 similar to monooxygenase K10215 ethA; monooxygenase [EC:1.14.13.-] D PAU_03235 Putative secreted protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_02090 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_02732 acylphosphatase (acylphosphate phosphohydrolase) K01512 acyP; acylphosphatase [EC:3.6.1.7] D PAU_01458 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAU_01020 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D PAU_01019 atoA; acetate coa-transferase beta subunit (acetyl-coa:acetoacetate co transferase beta subunit) K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:pay00625] D PAU_02881 yiaY; probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PAU_03905 adhC; glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAU_02030 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAU_01081 aldB; aldehyde dehydrogenase b (lactaldehyde dehydrogenase) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D PAU_00241 conserved hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PAU_02368 conserved hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D PAU_01416 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAU_03874 fadA; 3-ketoacyl-coa thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:pay00643] D PAU_00470 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D PAU_03235 Putative secreted protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D PAU_02090 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] C 00791 Atrazine degradation D PAU_02379 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D PAU_02380 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D PAU_02381 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:pay00930] D PAU_02206 Transcriptional regulator, AraC family K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D PAU_03873 fadB; fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAU_01417 fadJ; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D PAU_00241 conserved hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PAU_02368 conserved hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:pay00626] D PAU_02881 yiaY; probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PAU_03905 adhC; glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAU_02030 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pay03020] D PAU_00350 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PAU_00351 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PAU_04191 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PAU_00210 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pay03010] D PAU_02828 rpsA; 30s ribosomal protein s1 K02945 RP-S1; small subunit ribosomal protein S1 D PAU_00644 rpsB; 30s ribosomal protein s2 K02967 RP-S2; small subunit ribosomal protein S2 D PAU_04209 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PAU_04192 rpsD; 30s ribosomal subunit protein s4 K02986 RP-S4; small subunit ribosomal protein S4 D PAU_04199 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PAU_04072 rpsF; 30s ribosomal protein s6 K02990 RP-S6; small subunit ribosomal protein S6 D PAU_00340 rpsG; 30s ribosomal subunit protein s7 K02992 RP-S7; small subunit ribosomal protein S7 D PAU_04202 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PAU_03652 rpsI; 30s ribosomal subunit protein s9 K02996 RP-S9; small subunit ribosomal protein S9 D PAU_04216 rpsJ; 30s ribosomal subunit protein s10 K02946 RP-S10; small subunit ribosomal protein S10 D PAU_04193 rpsK; 30s ribosomal subunit protein s11 K02948 RP-S11; small subunit ribosomal protein S11 D PAU_00339 rpsL; 30s ribosomal protein s12 K02950 RP-S12; small subunit ribosomal protein S12 D PAU_04194 rpsM; 30s ribosomal subunit protein s13 K02952 RP-S13; small subunit ribosomal protein S13 D PAU_04203 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PAU_04026 rpsO; 30s ribosomal subunit protein s15 K02956 RP-S15; small subunit ribosomal protein S15 D PAU_03204 rpsP; 30s ribosomal protein s16 K02959 RP-S16; small subunit ribosomal protein S16 D PAU_04207 rpsQ; putative 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PAU_04070 rpsR; 30s ribosomal subunit protein s18 K02963 RP-S18; small subunit ribosomal protein S18 D PAU_04211 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PAU_00553 rpsT; 30s ribosomal protein s20 K02968 RP-S20; small subunit ribosomal protein S20 D PAU_03557 rpsU; 30s ribosomal subunit protein s21 K02970 RP-S21; small subunit ribosomal protein S21 D PAU_00347 rplA; 50s ribosomal subunit protein l1 K02863 RP-L1; large subunit ribosomal protein L1 D PAU_04212 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PAU_04215 rplC; 50s ribosomal protein l3 K02906 RP-L3; large subunit ribosomal protein L3 D PAU_04214 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PAU_04204 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PAU_04201 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PAU_00349 rplL; 50s ribosomal subunit protein l7/l12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PAU_04069 rplI; 50s ribosomal protein l9 K02939 RP-L9; large subunit ribosomal protein L9 D PAU_00348 rplJ; 50s ribosomal subunit protein l10 K02864 RP-L10; large subunit ribosomal protein L10 D PAU_00346 rplK; 50s ribosomal protein l11 K02867 RP-L11; large subunit ribosomal protein L11 D PAU_03653 rplM; 50s ribosomal protein l13 K02871 RP-L13; large subunit ribosomal protein L13 D PAU_04206 rplN; 50s ribosomal subunit protein l14 K02874 RP-L14; large subunit ribosomal protein L14 D PAU_04197 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PAU_04208 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PAU_04190 rplQ; 50s ribosomal subunit protein l17 K02879 RP-L17; large subunit ribosomal protein L17 D PAU_04200 rplR; 50s ribosomal protein l18 K02881 RP-L18; large subunit ribosomal protein L18 D PAU_03201 rplS; 50s ribosomal protein l19 K02884 RP-L19; large subunit ribosomal protein L19 D PAU_01869 rplT; 50s ribosomal protein l20 K02887 RP-L20; large subunit ribosomal protein L20 D PAU_04043 rplU; 50s ribosomal protein l21 K02888 RP-L21; large subunit ribosomal protein L21 D PAU_04210 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PAU_04213 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PAU_04205 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PAU_01665 rplY; 50s ribosomal protein l25 K02897 RP-L25; large subunit ribosomal protein L25 D PAU_04042 rpmA; 50s ribosomal protein l27 K02899 RP-L27; large subunit ribosomal protein L27 D PAU_04371 rpmB; 50s ribosomal protein l28 K02902 RP-L28; large subunit ribosomal protein L28 D PAU_04198 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PAU_00031 rpmE2; 50s ribosomal protein l31 type b K02909 RP-L31; large subunit ribosomal protein L31 D PAU_04246 rpmE; 50s ribosomal protein l31 K02909 RP-L31; large subunit ribosomal protein L31 D PAU_01700 rpmF; 50s ribosomal protein l32 K02911 RP-L32; large subunit ribosomal protein L32 D PAU_04370 rpmG; 50s ribosomal protein l33 K02913 RP-L33; large subunit ribosomal protein L33 D PAU_04401 rpmH; 50s ribosomal protein l34 K02914 RP-L34; large subunit ribosomal protein L34 D PAU_01868 rpmI; 50s ribosomal protein l35 K02916 RP-L35; large subunit ribosomal protein L35 D PAU_00030 rpmJ; 50s ribosomal protein l36 2 K02919 RP-L36; large subunit ribosomal protein L36 D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-7 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-6 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-6 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-3 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-4 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-5 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 5S_rRNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pay00970] D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-8 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys D tRNA-Gln-3 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Glu-4 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-6 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-His tRNA-His K14226 tRNA-His; tRNA His D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-7 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-5 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-20 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-21 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-6 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-12 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-11 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-17 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-16 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-10 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-15 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-19 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-18 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-8 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-5 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-7 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-6 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Sec tRNA-Sec K14238 tRNA-Sec; tRNA Sec D PAU_01411 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAU_03085 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAU_03211 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAU_00130 conserved hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAU_02474 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAU_02763 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAU_00227 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PAU_00228 glyS; glycyl-trna synthetase beta chain (glycine--trna ligase beta chain (glyrs) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PAU_01866 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAU_02841 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAU_04385 selA; L-seryl-tRNA(sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D PAU_01000 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAU_02892 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAU_04178 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PAU_03987 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAU_03156 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAU_00555 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAU_01226 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAU_00759 conserved hypothetical protein K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PAU_02501 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAU_00664 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAU_01387 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAU_01870 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAU_01871 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAU_01938 tyrS; tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAU_00140 tyrS2; tyrosyl-trna synthetase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAU_00066 trpS; tryptophanyl-tRNA synthetase (tryptophan--tRNA ligase (trprs) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pay03060] D PAU_04196 secY; preprotein translocase secy subunit K03076 secY; preprotein translocase subunit SecY D PAU_00344 secE; inner membrane preprotein translocase K03073 secE; preprotein translocase subunit SecE D PAU_04032 secG; protein-export membrane protein secg (preprotein translocase band subunit) (p12) K03075 secG; preprotein translocase subunit SecG D PAU_03488 Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD D PAU_03487 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D PAU_03489 Hypothetical protein yajC K03210 yajC; preprotein translocase subunit YajC D PAU_04398 oxaA; similar to 60 kda inner-membrane protein yidc of escherichia coli K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAU_01122 secA; preprotein translocase seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PAU_04347 secB; protein-export protein secb K03071 secB; preprotein translocase subunit SecB D PAU_01121 secM; secretion monitor precursor K13301 secM; secretion monitor D PAU_03205 ffh; signal recognition particle protein (fifty-four homolog) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PAU_03729 ftsY; cell division protein ftsy K03110 ftsY; fused signal recognition particle receptor D PAU_02194 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PAU_03881 tatA; sec-independent protein translocase protein tata/e homolog K03116 tatA; sec-independent protein translocase protein TatA D PAU_03880 tatB; sec-independent protein translocase protein tatb homolog K03117 tatB; sec-independent protein translocase protein TatB D PAU_03879 tatC; sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC D PAU_01304 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PAU_00556 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pay04122] D PAU_01362 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_00158 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_04154 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_02916 sseA; 3-mercaptopyruvate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAU_03736 tusA; sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PAU_00338 tusB; protein tusb (trna 2-thiouridine synthesizing protein b) K07237 tusB; tRNA 2-thiouridine synthesizing protein B D PAU_00337 tusC; protein tusc (trna 2-thiouridine synthesizing protein c) K07236 tusC; tRNA 2-thiouridine synthesizing protein C D PAU_00336 tusD; sulfurtransferase tusd K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D PAU_02731 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D PAU_01737 trmU; trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PAU_02931 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PAU_02934 moaA; molybdenum cofactor biosynthesis protein a K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PAU_01228 pqqE-4; coenzyme pqq synthesis protein e (pqqe-4) K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PAU_02932 moaD; molybdopterin biosynthesis (molybdopterin biosynthesis protein chain) K03636 moaD; sulfur-carrier protein D PAU_02903 moeB; molybdopterin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PAU_02933 moaC; molybdenum cofactor biosynthesis protein c K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PAU_00539 mog; molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D PAU_03436 Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PAU_00391 thiS; thiamin biosynthesis, probable sulfur donor K03154 thiS; sulfur carrier protein D PAU_00392 thiF; 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:pay03018] D PAU_00579 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D PAU_01696 rne; rnase e, membrane attachment, mrna turnover, maturation 5s rna (rnas e) K08300 rne; ribonuclease E [EC:3.1.26.12] D PAU_04145 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D PAU_00841 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAU_04025 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PAU_02922 rhlE; putative atp-dependent rna helicase rhle K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PAU_04074 rnr; ribonuclease r (rnase r) (vacb protein) K12573 rnr; ribonuclease R [EC:3.1.13.1] D PAU_04023 deaD; cold-shock dead box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PAU_04111 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PAU_04143 rho; transcription termination factor K03628 rho; transcription termination factor Rho D PAU_04264 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAU_00543 dnaK; chaperone hsp70, autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK D PAU_03756 groL; 60 kda chaperonin (protein cpn60) (groel protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAU_04080 hfq; hfq subunit of rna-binding homohexamer that affects many cellula processes K03666 hfq; host factor-I protein D PAU_01777 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PAU_00808 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pay03030] D PAU_01845 holE; dna polymerase iii, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAU_00861 dnaQ; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAU_00659 dnaE; dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAU_03388 DNA polymerase III subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAU_01710 holB; dna-directed dna polymerase iii delta' chain K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAU_03158 holA; dna-directed dna polymerase iii delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAU_00488 holD; DNA polymerase III, Psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAU_03986 holC; dna polymerase iii, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAU_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAU_03913 dnaB; replicative dna helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PAU_03558 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PAU_03307 gene0080; putative dna primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PAU_03311 gene0083; putative dna primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PAU_03907 ssb; single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein D PAU_00860 rnhA; putative DNA replication ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PAU_00658 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PAU_00299 polA; dna polymerase I polA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAU_01408 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_00221 yicF; similar to putative dna ligase-like protein yicf of escherichia coli K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pay03410] D PAU_02114 nth; endonuclease iii (dna-(apurinic or apyrimidinic site) lyase) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PAU_01276 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PAU_03291 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PAU_04363 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PAU_00226 tag; dna-3-methyladenine glycosylase i (3-methyladenine-dna glycosylase i constitutive) (tag i) (dna-3-methyladenine glycosidase i) K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D PAU_01983 xthA; exodeoxyribonuclease iii (exonuclease iii) (exo iii) (ap endonucleas vi) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PAU_01679 nfo; endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PAU_00299 polA; dna polymerase I polA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAU_01213 recJ; ssdna exonuclease, 5'--> 3' specific (ssdna exonuclease recj) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PAU_01408 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_00221 yicF; similar to putative dna ligase-like protein yicf of escherichia coli K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pay03420] D PAU_01723 mfd; transcription-repair coupling factor (trcf) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PAU_03908 uvrA; uvrabc system protein a (uvra protein) (excinuclease abc subunit a) K03701 uvrA; excinuclease ABC subunit A D PAU_02936 uvrB; uvrabc system protein b (protein uvrb) (excinuclease abc subunit b) K03702 uvrB; excinuclease ABC subunit B D PAU_02567 uvrC; uvrabc system protein c (protein uvrc) (excinuclease abc subunit c) K03703 uvrC; excinuclease ABC subunit C D PAU_04117 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PAU_00299 polA; dna polymerase I polA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAU_01408 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_00221 yicF; similar to putative dna ligase-like protein yicf of escherichia coli K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pay03430] D PAU_00696 mutS; dna mismatch repair protein muts K03555 mutS; DNA mismatch repair protein MutS D PAU_04082 mutL; dna mismatch repair protein mutl K03572 mutL; DNA mismatch repair protein MutL D PAU_01092 mutH; dna mismatch repair protein muth (methyl-directed mismatch repai protein) K03573 mutH; DNA mismatch repair protein MutH D PAU_04117 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PAU_01691 sbcB; exodeoxyribonuclease i (exonuclease i) (dn deoxyribophosphodiesterase) K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D PAU_01825 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PAU_03437 Probable exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PAU_01213 recJ; ssdna exonuclease, 5'--> 3' specific (ssdna exonuclease recj) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PAU_03907 ssb; single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein D PAU_00659 dnaE; dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAU_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAU_03388 DNA polymerase III subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAU_03158 holA; dna-directed dna polymerase iii delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAU_01710 holB; dna-directed dna polymerase iii delta' chain K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAU_00861 dnaQ; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAU_01845 holE; dna polymerase iii, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAU_03986 holC; dna polymerase iii, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAU_00488 holD; DNA polymerase III, Psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAU_01408 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_00221 yicF; similar to putative dna ligase-like protein yicf of escherichia coli K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_00069 dam; DNA adenine methylase (deoxyadenosyl-methyltransferase (dna adenine methyltransferase) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_04395 n6 adenine-specific dna methyltransferase, d12 class K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_04304 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:pay03440] D PAU_01213 recJ; ssdna exonuclease, 5'--> 3' specific (ssdna exonuclease recj) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PAU_03907 ssb; single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein D PAU_00003 recF; dna replication and repair protein recf K03629 recF; DNA replication and repair protein RecF D PAU_01307 recO; dna repair protein reco (recombination protein o) K03584 recO; DNA repair protein RecO (recombination protein O) D PAU_03386 Recombination protein recR K06187 recR; recombination protein RecR D PAU_03212 Protein recA (Recombinase A) K03553 recA; recombination protein RecA D PAU_00299 polA; dna polymerase I polA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAU_02470 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PAU_02469 ruvB; RuvB protein, holliday junction helicase subunit A K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PAU_02471 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PAU_00196 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PAU_00591 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D PAU_00589 recC; exodeoxyribonuclease v gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D PAU_00592 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D PAU_00659 dnaE; dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAU_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAU_03388 DNA polymerase III subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAU_03158 holA; dna-directed dna polymerase iii delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAU_01710 holB; dna-directed dna polymerase iii delta' chain K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAU_00861 dnaQ; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAU_01845 holE; dna polymerase iii, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAU_03986 holC; dna polymerase iii, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAU_00488 holD; DNA polymerase III, Psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAU_04247 priA; primosomal protein n'(= factor y)(putative helicase) (primosoma protein n') K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PAU_04071 priB; primosomal replication protein n K02686 priB; primosomal replication protein N D PAU_03390 Primosomal replication protein N K04067 priC; primosomal replication protein N'' C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:pay03250] D PAU_00302 ppiA; peptidyl-prolyl cis-trans isomerase A precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pay02010] D PAU_01397 cysP; thiosulfate-binding protein cysp K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PAU_04263 sbp; sulfate-binding protein (sulfate starvation-induced protein 2) (ssi2) K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D PAU_01398 cysU; sulfate, thiosulfate transport system permease t protein (sulfat transport system permease t protein) K02046 cysU; sulfate/thiosulfate transport system permease protein D PAU_01399 cysW; sulfate transport system permease protein cysw K02047 cysW; sulfate/thiosulfate transport system permease protein D PAU_01400 cysA; sulfate/thiosulfate import ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PAU_02946 modA; molybdate-binding periplasmic protein K02020 modA; molybdate transport system substrate-binding protein D PAU_02945 modB; molybdenum transport system permease protein modb K02018 modB; molybdate transport system permease protein D PAU_02944 modC; molybdenum import ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PAU_02948 modF; atp-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein D PAU_00764 afuA; periplasmic ferric iron-binding protein (putative periplasmic-iron binding protein) K02012 afuA; iron(III) transport system substrate-binding protein D PAU_00763 afuB; putative permease component of transport system for ferric iro (putative ferric transport system permease) K02011 afuB; iron(III) transport system permease protein D PAU_00762 fbpC; ferric cations import ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PAU_00578 tbpA; thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein D PAU_00577 yabK; thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein D PAU_00576 thiQ; thiamine import ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PAU_03179 proX; glycine betaine-binding periplasmic protein prox K02002 proX; glycine betaine/proline transport system substrate-binding protein D PAU_03178 proW; glycine betaine/l-proline transport system permease protein prow K02001 proW; glycine betaine/proline transport system permease protein D PAU_03177 proV; glycine betaine/l-proline transport atp-binding protein prov K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D PAU_00367 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D PAU_00368 malF; maltose transport system permease protein malf K10109 malF; maltose/maltodextrin transport system permease protein D PAU_00369 malG; maltose transport system permease protein K10110 malG; maltose/maltodextrin transport system permease protein D PAU_00366 malK; maltose/maltodextrin import ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAU_03669 conserved hypothetical Protein K07323 mlaC; phospholipid transport system substrate-binding protein D PAU_03670 conserved hypothetical Protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PAU_03671 conserved hypothetical Protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PAU_03668 conserved hypothetical Protein K07122 mlaB; phospholipid transport system transporter-binding protein D PAU_03672 yrbF; hypothetical abc transporter atp-binding protein yrbf K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PAU_00054 rbsB; d-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D PAU_00053 rbsC; ribose transport system permease protein K10440 rbsC; ribose transport system permease protein D PAU_00052 rbsA; ribose transport atp-binding protein rbsa K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAU_00051 rbsD; high affinity ribose transport protein rbsd K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D PAU_00162 pstS; phosphate-binding periplasmic protein psts K02040 pstS; phosphate transport system substrate-binding protein D PAU_00163 pstC; phosphate transport system permease protein pstc K02037 pstC; phosphate transport system permease protein D PAU_00164 pstA; phosphate transport system permease protein psta K02038 pstA; phosphate transport system permease protein D PAU_00165 pstB; phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PAU_02858 artI; arginine-binding periplasmic protein 1 K09997 artI; arginine transport system substrate-binding protein D PAU_02860 artM; arginine transport system permease protein artm K09998 artM; arginine transport system permease protein D PAU_02859 artQ; arginine transport system permease protein artq K09999 artQ; arginine transport system permease protein D PAU_02857 artP; arginine transport atp-binding protein artp K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D PAU_03152 gltI; glutamate/aspartate transport system permease protein glti K10001 gltI; glutamate/aspartate transport system substrate-binding protein D PAU_03154 gltK; glutamate/aspartate transport system permease protein gltk K10002 gltK; glutamate/aspartate transport system permease protein D PAU_03153 gltJ; glutamate/aspartate transport system permease protein gltj K10003 gltJ; glutamate/aspartate transport system permease protein D PAU_03155 gltL; glutamate/aspartate transport atp-binding protein gltl K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D PAU_03993 similar to amino acid abc transporter K02424 tcyA; L-cystine transport system substrate-binding protein D PAU_03990 yecS; similar to amino acid abc transporter K02424 tcyA; L-cystine transport system substrate-binding protein D PAU_03991 yecS; similar to extracellular solute-binding protein-amino acid abc transporter K10009 tcyB; L-cystine transport system permease protein D PAU_03992 yecC; hypothetical amino-acid abc transporter atp-binding protein yecc K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D PAU_03723 livK; leucine-specific binding protein livk K01999 livK; branched-chain amino acid transport system substrate-binding protein D PAU_03722 livH; high-affinity branched-chain amino acid transport system permeas protein livh (liv-i protein h) K01997 livH; branched-chain amino acid transport system permease protein D PAU_03721 livM; high-affinity branched-chain amino acid transport system permeas protein livm K01998 livM; branched-chain amino acid transport system permease protein D PAU_03720 livG; high-affinity branched-chain amino acid transport atp-binding protei livg K01995 livG; branched-chain amino acid transport system ATP-binding protein D PAU_03719 livF; high-affinity branched-chain amino acid transport atp-binding protein livf K01996 livF; branched-chain amino acid transport system ATP-binding protein D PAU_00667 metQ; d-methionine-binding periplasmic protein metq K02073 metQ; D-methionine transport system substrate-binding protein D PAU_00668 metI; d-methionine transport permease protein meti K02072 metI; D-methionine transport system permease protein D PAU_00669 metN; methionine import ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D PAU_02033 oppA2; oligopeptide transport periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_01958 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02342 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02032 oppA1; oligopeptide transport periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02337 dppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02034 oppB; oligopeptide transport system permease protein oppb K15581 oppB; oligopeptide transport system permease protein D PAU_02035 oppC; oligopeptide transport system permease protein oppc K15582 oppC; oligopeptide transport system permease protein D PAU_02036 oppD; oligopeptide transport atp-binding protein oppd K15583 oppD; oligopeptide transport system ATP-binding protein D PAU_02037 oppF; oligopeptide transport atp-binding protein oppf K10823 oppF; oligopeptide transport system ATP-binding protein D PAU_00231 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein D PAU_00232 dppB; dipeptide transport system permease protein dppb K12369 dppB; dipeptide transport system permease protein D PAU_00233 dppC; dipeptide transport system permease protein dppc K12370 dppC; dipeptide transport system permease protein D PAU_00234 dppD; dipeptide transport atp-binding protein dppd K12371 dppD; dipeptide transport system ATP-binding protein D PAU_00235 dppF; putative atp-binding component of dipeptide transport system K12372 dppF; dipeptide transport system ATP-binding protein D PAU_01947 sapA; peptide transport periplasmic protein sapa K19226 sapA; cationic peptide transport system substrate-binding protein D PAU_01946 sapB; peptide transport system permease protein sapb K19227 sapB; cationic peptide transport system permease protein D PAU_01945 sapC; peptide transport system permease protein sapc K19228 sapC; cationic peptide transport system permease protein D PAU_01944 sapD; peptide transport system atp-binding protein sapd K19229 sapD; cationic peptide transport system ATP-binding protein D PAU_01943 sapF; peptide transport system atp-binding protein sapf K19230 sapF; cationic peptide transport system ATP-binding protein D PAU_03942 fecB; iron(iii) dicitrate-binding periplasmic protein fecb K23181 fecB; ferric citrate transport system substrate-binding protein D PAU_03944 fecD; iron(iii) dicitrate transport system permease protein fecd K23182 fecD; ferric citrate transport system permease protein D PAU_03943 fecC; iron(iii) dicitrate transport system permease protein fecc K23183 fecC; ferric citrate transport system permease protein D PAU_03945 fecE; iron(iii) dicitrate transport atp-binding protein fece K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D PAU_00886 phuB; ferrienterobactin-binding periplasmic protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D PAU_00887 phuG; cytoplasmic membrane permease (ferric vibriobactin abc transporter permease protein) K23186 fepD; iron-siderophore transport system permease protein D PAU_00888 phuD; ferric enterobactin transport protein fepg K23187 fepG; iron-siderophore transport system permease protein D PAU_00891 phuC; ferric vibriobactin abc transporter, atp-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D PAU_00826 btuF; vitamin b12-binding protein precursor K06858 btuF; vitamin B12 transport system substrate-binding protein D PAU_01873 btuC; vitamin b12 import system permease protein btuc K06073 btuC; vitamin B12 transport system permease protein D PAU_01874 btuD; vitamin B12 import ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D PAU_02466 znuA; putative zinc uptake system component K09815 znuA; zinc transport system substrate-binding protein D PAU_02468 znuB; high-affinity zinc uptake system membrane protein znub K09816 znuB; zinc transport system permease protein D PAU_02467 znuC; putative zinc import ATP-binding component of ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PAU_01864 iron (chelated) abc transporter, periplasmic-binding protein yfea K11604 sitA; manganese/iron transport system substrate-binding protein D PAU_01862 yfeC; chelated iron transport system membrane protein yfec K11605 sitC; manganese/iron transport system permease protein D PAU_01861 yfeD; chelated iron transport system membrane protein yfed homolog K11606 sitD; manganese/iron transport system permease protein D PAU_01863 iron transport system atp-binding protein yfeb K11607 sitB; manganese/iron transport system ATP-binding protein D PAU_03394 Biotin synthase K03523 bioY; biotin transport system substrate-specific component D PAU_03395 ABC transporter for cobalt K16783 bioN; biotin transport system permease protein D PAU_03396 Cobalt import ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D PAU_01726 lolC; lipoprotein releasing system transmembrane protein lolc K09808 lolC_E; lipoprotein-releasing system permease protein D PAU_01728 lolE; lipoprotein releasing system transmembrane protein lole K09808 lolC_E; lipoprotein-releasing system permease protein D PAU_01727 lolD; lipoprotein-releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D PAU_03984 yjgP; inner membrane protein yjgp K07091 lptF; lipopolysaccharide export system permease protein D PAU_03983 yjgQ; similar to putative membrane protein yjgq of escherichia coli K11720 lptG; lipopolysaccharide export system permease protein D PAU_03678 yhbG; probable abc transporter atp-binding protein yhbg K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D PAU_03727 ftsX; cell division protein ftsx K09811 ftsX; cell division transport system permease protein D PAU_03728 ftsE; cell division atp-binding protein ftse K09812 ftsE; cell division transport system ATP-binding protein D PAU_02300 ybtP; putative inner membrane abc-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D PAU_02301 ybtP; putative inner membrane abc-transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D PAU_02819 msbA; lipid a export atp-binding/permease protein msba K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D PAU_03407 Multidrug resistance-like ATP-binding protein mdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D PAU_03406 Multidrug resistance-like ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D PAU_01345 mchF; probable microcin h47 secretion atp-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D PAU_00628 putative membrane protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D PAU_00607 hasD; transport protein hasd K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D PAU_02848 cydC; transport atp-binding protein cydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D PAU_02847 cydD; transport atp-binding protein cydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D PAU_02854 macB; macrolide-specific abc-type efflux carrier protein macb K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] C 02060 Phosphotransferase system (PTS) [PATH:pay02060] D PAU_01403 ptsI; phosphoenolpyruvate-protein phosphotransferase (phosphotransferas system, enzyme i) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D PAU_01404 ptsH; phosphocarrier protein hpr (histidine-containing protein) K02784 ptsH; phosphocarrier protein HPr D PAU_01402 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAU_03088 nagE; pts system, n-acetylglucosamine-specific iiabc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PAU_01260 scrA; PTS system, sucrose-specific IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PAU_00547 bglF; beta-glucoside-specific phosphotransferase system-dependent permease K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D PAU_00549 bglP; similar to beta-glucoside permease iiabc component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D PAU_01357 treB; pts system, trehalose-specific iibc component (eiibc-tre) (trehalose permease iibc component) (phosphotransferase enzyme ii, bc component (eii-tre) K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D PAU_00314 putative PTS system EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D PAU_01786 celC; pts system, cellobiose-specific iia component (eiia-cel) (cellobiose permease iia component) (phosphotransferase enzyme ii, a component (eiii-cel) K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAU_01788 celA; pts system, cellobiose-specific iib component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAU_01787 celB; phosphotransferase system cellobiose-specific component iic K02761 celB; cellobiose PTS system EIIC component D PAU_01837 manX; pts system, mannose-specific iiab component (eiiab-man) (mannose permease iiab component) (phosphotransferase enzyme ii, ab component (eiii-man) K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D PAU_01836 manY; pts system, mannose-specific iic component (eiic-man) (mannose permease iic component) (phosphotransferase enzyme ii, c component (eii-p-man) K02795 manY; mannose PTS system EIIC component D PAU_01835 manZ; pts system, mannose-specific iid component (eiid-man) (mannose permease iid component) (phosphotransferase enzyme ii, d component (eii-m-man) K02796 manZ; mannose PTS system EIID component D PAU_00778 yadI; similar to putative pts system iia component yadi of escherichia coli K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D PAU_00775 agaV; pts system, n-acetylgalactosamine-specific iib component 2 (eiib-aga' (n-acetylgalactosamine-permease iib component 2) (phosphotransferas enzyme ii, b component 2) K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D PAU_00776 agaC; pts system, n-acetylgalactosamine-specific iic component 1 (eiic-aga (n-acetylgalactosamine-permease iic component 1) K02746 agaW; N-acetylgalactosamine PTS system EIIC component D PAU_00777 agaD; pts system, n-acetylgalactosamine-specific iid component (eiid-aga (n-acetylgalactosamine-permease iid component) (phosphotransferas enzyme ii, d component) K02747 agaE; N-acetylgalactosamine PTS system EIID component D PAU_02591 sgcA; putative phosphotransferase enzyme ii, a component sgca K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAU_02590 sgaB; conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAU_02589 conserved hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component D PAU_01678 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D PAU_00580 ptsP; phosphoenolpyruvate-protein phosphotransferase pts (phosphotransferase system, enzyme i) (enzyme i-ntr) K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D PAU_03683 ptsO; phosphocarrier protein npr (nitrogen related hpr) K08485 ptsO; phosphocarrier protein NPr D PAU_03681 ptsN; nitrogen regulatory iia protein (enzyme iia-ntr) (phosphotransferas enzyme ii, a component) K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:pay03070] D PAU_03531 tolC; outer membrane protein tolc K12340 tolC; outer membrane protein D PAU_01889 probable outer membrane protein K12340 tolC; outer membrane protein D PAU_02198 putative outer membrane efflux protein K12340 tolC; outer membrane protein D PAU_01035 sctF; type iii secretion component protein sctf K03221 yscF; type III secretion protein F D PAU_01051 sctO; type iii secretion component protein scto K04056 yscO; type III secretion protein O D PAU_01050 sctP; type iii secretion component protein sctp K04057 yscP; type III secretion protein P D PAU_01055 sctX; type iii secretion protein sctx K04059 yscX; type III secretion protein X D PAU_01037 sctC; type iii secretion outer membrane protein pscc K03219 yscC; type III secretion protein C D PAU_01053 sctW; type iii secretion control protein sctw K04058 yscW; type III secretion protein W D PAU_01031 sctJ; type iii secretion component protein sctj K03222 yscJ; type III secretion protein J D PAU_01048 sctR; type iii secretion component protein sctr K03226 yscR; type III secretion protein R D PAU_01047 sctS; type iii secretion component protein scts K03227 yscS; type III secretion protein S D PAU_01046 sctT; type iii secretion component protein sctt K03228 yscT; type III secretion protein T D PAU_01045 sctU; type iii secretion component protein sctu K03229 yscU; type III secretion protein U D PAU_01057 lssD; type iii secretory apparatus protein pcrd K03230 yscV; type III secretion protein V D PAU_03450 Putative type III secretion system EscV protein K03230 yscV; type III secretion protein V D PAU_01052 sctN; type iii secretion component protein sctn K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D PAU_03469 Putative Type III secretion ATP synthase hrcN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D PAU_01049 sctQ; type iii secretion component protein sctq K03225 yscQ; type III secretion protein Q D PAU_01029 sctL; type iii secretion component protein sctl K03223 yscL; type III secretion protein L D PAU_03274 Pilin biogenesis protein PilD K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAU_02785 pppA; type 4 prepilin-like proteins leader peptide processing enzyme (pecti enzymes secretion protein outo) K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAU_03488 Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD D PAU_03487 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D PAU_00344 secE; inner membrane preprotein translocase K03073 secE; preprotein translocase subunit SecE D PAU_04032 secG; protein-export membrane protein secg (preprotein translocase band subunit) (p12) K03075 secG; preprotein translocase subunit SecG D PAU_04196 secY; preprotein translocase secy subunit K03076 secY; preprotein translocase subunit SecY D PAU_03489 Hypothetical protein yajC K03210 yajC; preprotein translocase subunit YajC D PAU_04398 oxaA; similar to 60 kda inner-membrane protein yidc of escherichia coli K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAU_01122 secA; preprotein translocase seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PAU_01121 secM; secretion monitor precursor K13301 secM; secretion monitor D PAU_03729 ftsY; cell division protein ftsy K03110 ftsY; fused signal recognition particle receptor D PAU_04347 secB; protein-export protein secb K03071 secB; preprotein translocase subunit SecB D PAU_03205 ffh; signal recognition particle protein (fifty-four homolog) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PAU_03881 tatA; sec-independent protein translocase protein tata/e homolog K03116 tatA; sec-independent protein translocase protein TatA D PAU_03880 tatB; sec-independent protein translocase protein tatb homolog K03117 tatB; sec-independent protein translocase protein TatB D PAU_03879 tatC; sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC D PAU_00246 phlB; phla hemolysin secretion/activation protein phlb K11017 shlB; hemolysin activation/secretion protein D PAU_00245 hylA; hemolysin phla protein K11016 shlA; hemolysin D PAU_00969 vgrG; conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03538 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_00262 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_04094 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02446 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02311 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03805 conserved hypothetical Protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02320 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03831 conserved hypothetical Protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_00273 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_00512 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02485 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02639 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03048 vgrG4; conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02276 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02796 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02280 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_00289 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_03056 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_03792 conserved hypothetical Protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_03833 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_02414 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_03050 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_00282 putative membrane protein K11906 vasD; type VI secretion system protein VasD D PAU_03816 conserved hypothetical Protein K11906 vasD; type VI secretion system protein VasD D PAU_02269 putative membrane protein K11891 impL; type VI secretion system protein ImpL D PAU_02312 similar to putative membrane protein of y. pestis K11891 impL; type VI secretion system protein ImpL D PAU_03041 similar to putative membrane protein of y. pestis K11891 impL; type VI secretion system protein ImpL D PAU_00275 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL D PAU_03788 Putative membrane Protein K11891 impL; type VI secretion system protein ImpL D PAU_03820 Putative membrane Protein K11891 impL; type VI secretion system protein ImpL D PAU_03058 membrane protein K11892 impK; type VI secretion system protein ImpK D PAU_00280 Putative membrane Protein K11892 impK; type VI secretion system protein ImpK D PAU_03787 outer membrane protein, ompa/motb family K11892 impK; type VI secretion system protein ImpK D PAU_03835 putative membrane protein K11892 impK; type VI secretion system protein ImpK D PAU_02270 putative transmembrane protein K11892 impK; type VI secretion system protein ImpK D PAU_02268 similar to clpa/b-type chaperone K11907 vasG; type VI secretion system protein VasG D PAU_00279 similar to clpa/b-type chaperone K11907 vasG; type VI secretion system protein VasG D PAU_03798 conserved hypothetical protein K11907 vasG; type VI secretion system protein VasG D PAU_03832 similar to clpa/b-type chaperone K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:pay02020] D PAU_03501 phoR; positive and negative sensor protein for pho regulon (positive an negative sensor protein for pho regulon phor) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PAU_03502 phoB; phosphate regulon transcriptional regulatory protein phob K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D PAU_00480 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAU_00162 pstS; phosphate-binding periplasmic protein psts K02040 pstS; phosphate transport system substrate-binding protein D PAU_01733 phoQ; sensor protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAU_01734 phoP; two-component response regulator phop K07660 phoP; two-component system, OmpR family, response regulator PhoP D PAU_02601 similar to putative pagc-like virulence-related membrane protein K07804 pagC; putatice virulence related protein PagC D PAU_00161 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D PAU_00160 ompR; transcriptional regulatory protein ompr K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D PAU_02765 ompN2; outer membrane protein n (porin ompn) K09476 ompF; outer membrane pore protein F D PAU_02764 ompN1; outer membrane protein ompN K09476 ompF; outer membrane pore protein F D PAU_04310 cpxA; two-component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D PAU_04309 cpxR; transcriptional two-component response regulatory protein cpxr K07662 cpxR; two-component system, OmpR family, response regulator CpxR D PAU_01765 baeS; sensory histidine kinase protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D PAU_01764 baeR; transcriptional regulatory protein baer K07664 baeR; two-component system, OmpR family, response regulator BaeR D PAU_01768 mdtA; multidrug resistance protein mdta precursor (multidrug transporte mdta) K07799 mdtA; membrane fusion protein, multidrug efflux system D PAU_01767 mdtB; multidrug resistance protein mdtb (multidrug transporter mdtb) K07788 mdtB; multidrug efflux pump D PAU_01766 mdtC; multidrug resistance protein mdtc (multidrug transporter mdtc) K07789 mdtC; multidrug efflux pump D PAU_01875 arnB; UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D PAU_02691 flhD; transcriptional activator flhd K02403 flhD; flagellar transcriptional activator FlhD D PAU_02690 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D PAU_02609 fliC; flagellin (flic) K02406 fliC; flagellin D PAU_02608 fliA; rna polymerase sigma factor for flagellar operon (sigma-f factor (sigma-27) (sigma-28) K02405 fliA; RNA polymerase sigma factor FliA D PAU_02689 motA; chemotaxis mota protein K02556 motA; chemotaxis protein MotA D PAU_02989 kdpD; sensor protein (histidine kinase) K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PAU_02990 kdpE; transcriptional regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PAU_02986 kdpA; potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D PAU_02987 kdpB; potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D PAU_02988 kdpC; potassium-transporting atpase c chain K01548 kdpC; potassium-transporting ATPase KdpC subunit D PAU_03644 arcB; aerobic respiration control sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PAU_00532 arcA; negative response regulator of genes in aerobic pathways, (sensors arcb and cpxa) (dye resistance protein) K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D PAU_01446 tctE; sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PAU_01445 tctD; two-component response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D PAU_01440 tctA; putative membrane protein K07793 tctA; putative tricarboxylic transport membrane protein D PAU_01441 tctB; conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D PAU_01442 tctC; conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D PAU_00001 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D PAU_02896 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PAU_02549 narX; similar to nitrate/nitrite sensor protein narx K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D PAU_01819 narP; nitrate/nitrite response regulator protein narp K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D PAU_00744 fdnG; fdnG, alpha subunit of formate dehydrogenase-N K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D PAU_03748 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAU_03749 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAU_03750 frdC; fumarate reductase 15 kda hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C D PAU_03751 frdD; fumarate reductase 13 kda hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D D PAU_00765 uhpC; putative permease; hexosephosphate transport (putative regulator protein) K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D PAU_00766 uhpB; two-component sensor histidine kinase uhpb, phosphorylates uhpa K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D PAU_00767 uhpA; two-component response regulator. hexose phosphate transport syste regulatory protein uhpa K20264 fusR; two-component system, NarL family, response regulator FusR D PAU_00666 rcsF; exopolysaccharide synthesis regulatory protein rcsf K06080 rcsF; RcsF protein D PAU_01559 rcsC; sensor protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D PAU_01561 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D PAU_01560 rcsB; capsular synthesis regulator component b K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D PAU_02266 pvpR; pvp response regulator (two-component response regulator bvg protein) K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D PAU_00829 barA; signal transduction histidine-protein kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PAU_02566 uvrY; response regulator uvry K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D PAU_00252 sdiA1; similar to probable transcription regulator SdiA of Escherichia coli K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAU_00255 sdiA2; similar to probable transcription regulator SdiA of Escherichia coli K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAU_03210 Carbon storage regulator K03563 csrA; carbon storage regulator D PAU_02265 pvpS; pvp sensor (virulence sensor protein bvgs) K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D PAU_00771 ampC; ampc-type class c beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D PAU_00203 afaB; afab K07346 fimC; fimbrial chaperone protein D PAU_02408 yraJ; putative outer membrane protein K07347 fimD; outer membrane usher protein D PAU_03859 putative usher protein (putative outer membrane usher protein) K07347 fimD; outer membrane usher protein D PAU_00205 lpfC; similar to outer membrane usher protein K07347 fimD; outer membrane usher protein D PAU_00972 yraJ; putative outer membrane protein K07347 fimD; outer membrane usher protein D PAU_00642 glnD; [protein-pII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D PAU_01330 glnB; nitrogen regulatory protein p-ii.1 K04751 glnB; nitrogen regulatory protein P-II 1 D PAU_00178 glnL; nitrogen regulation protein nr(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PAU_00177 glnG; nitrogen regulation protein nr(i) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D PAU_00179 glnA; glutamine synthetase (glutamate--ammonia ligase) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAU_01021 atoC; acetoacetate metabolism regulatory protein atoc K07714 atoC; two-component system, NtrC family, response regulator AtoC D PAU_01020 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D PAU_01019 atoA; acetate coa-transferase beta subunit (acetyl-coa:acetoacetate co transferase beta subunit) K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_03012 dctA; c4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D PAU_03679 rpoN; rna polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D PAU_01326 yfhK; two-component signal transduction system,sensor-like His kinase regulatory protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PAU_01328 yfhA; similar to putative 2-component transcriptional regulator yfha o escherichia coli K07715 glrR; two-component system, NtrC family, response regulator GlrR D PAU_02683 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PAU_02685 cheD; methyl-accepting chemotaxis protein i (mcp-i) (serine chemorecepto protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAU_02684 tap; methyl-accepting chemotaxis protein iv, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D PAU_02686 cheW; purine binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D PAU_02687 cheA; chemotaxis protein chea K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAU_02681 cheY; chemotaxis protein chey K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PAU_02682 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PAU_02514 luxC; acyl-CoA reductase K03400 luxC; long-chain-fatty-acyl-CoA reductase [EC:1.2.1.50] D PAU_02513 luxD; acyl transferase K15853 luxD; acyl transferase [EC:2.3.1.-] D PAU_02512 luxA; luciferase K00494 luxA; alkanal monooxygenase alpha chain [EC:1.14.14.3] D PAU_02511 luxB; luciferase beta subunit K15854 luxB; alkanal monooxygenase beta chain [EC:1.14.14.3] D PAU_02510 luxE; LuxE bioluminescence protein K06046 luxE; long-chain-fatty-acid---luciferin-component ligase [EC:6.2.1.19] D PAU_04152 conserved hypothetical protein K06046 luxE; long-chain-fatty-acid---luciferin-component ligase [EC:6.2.1.19] D PAU_03782 two-component sensor/regulator precursor K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA D PAU_03781 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB D PAU_03155 gltL; glutamate/aspartate transport atp-binding protein gltl K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D PAU_03154 gltK; glutamate/aspartate transport system permease protein gltk K10002 gltK; glutamate/aspartate transport system permease protein D PAU_03153 gltJ; glutamate/aspartate transport system permease protein gltj K10003 gltJ; glutamate/aspartate transport system permease protein D PAU_03152 gltI; glutamate/aspartate transport system permease protein glti K10001 gltI; glutamate/aspartate transport system substrate-binding protein D PAU_00306 crp; catabolite gene activator (camp receptor protein) (camp-regulator protein) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PAU_03288 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D PAU_02967 cydA2; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAU_02547 cioA; ubiquinol oxidase subunit i, cyanide insensitive K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAU_00874 cydA1; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAU_02966 cydB2; cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAU_02548 cioB; ubiquinol oxidase subunit ii, cyanide insensitive K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAU_00875 cydB1; cytochrome d terminal oxidase polypeptide subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAU_02965 putative membrane protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D PAU_03077 rtxB; RTX toxin ABC transporter protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB D PAU_03078 rtxD; RTX toxin ABC transporter protein K12532 rtxD; membrane fusion protein, RTX toxin transport system D PAU_03079 Putative toxin transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE D PAU_03531 tolC; outer membrane protein tolc K12340 tolC; outer membrane protein D PAU_01889 probable outer membrane protein K12340 tolC; outer membrane protein D PAU_02198 putative outer membrane efflux protein K12340 tolC; outer membrane protein D PAU_03369 MCF toxin K19615 fitD; insecticidal toxin D PAU_01073 wza; similar to putative polysaccharide export protein yccz K01991 wza; polysaccharide biosynthesis/export protein D PAU_01074 wzb; conserved hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D PAU_01075 wzc; tyrosine-protein kinase wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D PAU_04140 wecB; udp-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PAU_04139 wecC; udp-n-acetyl-d-mannosaminuronic acid dehydrogenase (udp-mannac dehydrogenase) K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D PAU_03224 Similar to sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D PAU_03939 fecI; probable rna polymerase sigma factor feci K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D PAU_03940 fecR; protein fecr K07165 fecR; transmembrane sensor D PAU_02653 flgM; negative regulator of flagellin synthesis (anti-sigma-28 factor) flgm K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D PAU_00371 rocF; arginase/agmatinase/formimionoglutamate hydrolase K01476 E3.5.3.1; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pay02024] D PAU_03208 luxS; s-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D PAU_04080 hfq; hfq subunit of rna-binding homohexamer that affects many cellula processes K03666 hfq; host factor-I protein D PAU_02512 luxA; luciferase K00494 luxA; alkanal monooxygenase alpha chain [EC:1.14.14.3] D PAU_02511 luxB; luciferase beta subunit K15854 luxB; alkanal monooxygenase beta chain [EC:1.14.14.3] D PAU_02514 luxC; acyl-CoA reductase K03400 luxC; long-chain-fatty-acyl-CoA reductase [EC:1.2.1.50] D PAU_02513 luxD; acyl transferase K15853 luxD; acyl transferase [EC:2.3.1.-] D PAU_02510 luxE; LuxE bioluminescence protein K06046 luxE; long-chain-fatty-acid---luciferin-component ligase [EC:6.2.1.19] D PAU_04152 conserved hypothetical protein K06046 luxE; long-chain-fatty-acid---luciferin-component ligase [EC:6.2.1.19] D PAU_02055 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PAU_02054 trpG; anthranilate synthase component ii (glutamine amido-transferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PAU_03199 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAU_01900 aroH; phospho2-dehydro-3-deoxyheptonate aldolase, trp-sensitive (3-deoxy-d arabinoheptulosonate 7-phosphate synthase) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAU_02951 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAU_01326 yfhK; two-component signal transduction system,sensor-like His kinase regulatory protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PAU_01328 yfhA; similar to putative 2-component transcriptional regulator yfha o escherichia coli K07715 glrR; two-component system, NtrC family, response regulator GlrR D PAU_02691 flhD; transcriptional activator flhd K02403 flhD; flagellar transcriptional activator FlhD D PAU_02690 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D PAU_02990 kdpE; transcriptional regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PAU_00766 uhpB; two-component sensor histidine kinase uhpb, phosphorylates uhpa K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D PAU_00767 uhpA; two-component response regulator. hexose phosphate transport syste regulatory protein uhpa K20264 fusR; two-component system, NarL family, response regulator FusR D PAU_00252 sdiA1; similar to probable transcription regulator SdiA of Escherichia coli K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAU_00255 sdiA2; similar to probable transcription regulator SdiA of Escherichia coli K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAU_01471 conserved hypothetical protein K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189] D PAU_01470 lsrR; putative transcriptional regulator, sorc family (putative sorc-typ transcriptional regulator) K11531 lsrR; lsr operon transcriptional repressor D PAU_01469 yneB; putative aldolase yneb K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] D PAU_01468 lsrG; conserved hypothetical protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D PAU_03723 livK; leucine-specific binding protein livk K01999 livK; branched-chain amino acid transport system substrate-binding protein D PAU_03722 livH; high-affinity branched-chain amino acid transport system permeas protein livh (liv-i protein h) K01997 livH; branched-chain amino acid transport system permease protein D PAU_03721 livM; high-affinity branched-chain amino acid transport system permeas protein livm K01998 livM; branched-chain amino acid transport system permease protein D PAU_03720 livG; high-affinity branched-chain amino acid transport atp-binding protei livg K01995 livG; branched-chain amino acid transport system ATP-binding protein D PAU_03719 livF; high-affinity branched-chain amino acid transport atp-binding protein livf K01996 livF; branched-chain amino acid transport system ATP-binding protein D PAU_00481 attM_aiiB; similar to zn-dependent hydrolases and to ahl-lactonase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D PAU_00247 conserved hypothetical protein K20275 aidA; nematocidal protein AidA D PAU_00248 conserved hypothetical protein K20275 aidA; nematocidal protein AidA D PAU_00249 conserved hypothetical protein K20275 aidA; nematocidal protein AidA D PAU_00250 conserved hypothetical protein K20275 aidA; nematocidal protein AidA D PAU_00251 conserved hypothetical protein K20275 aidA; nematocidal protein AidA D PAU_00254 conserved hypothetical protein K20275 aidA; nematocidal protein AidA D PAU_02808 conserved hypothetical protein K20277 bcl; mannose-binding lectin D PAU_03846 similar to photopexin a/b of photorhabdus luminescens K20277 bcl; mannose-binding lectin D PAU_01099 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_02433 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_00306 crp; catabolite gene activator (camp receptor protein) (camp-regulator protein) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PAU_03925 zur; zinc uptake regulation protein (zinc uptake regulator) K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D PAU_03241 ToxA protein K20331 toxA; toxoflavin synthase [EC:2.1.1.349] D PAU_02078 ribA; gtp cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAU_02346 ribA; gtp cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAU_02345 conserved hypothetical protein K20332 toxC; toxoflavin biosynthesis protein ToxC D PAU_02344 conserved hypothetical protein K20333 toxD; toxoflavin biosynthesis protein ToxD D PAU_03484 Riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PAU_02365 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D PAU_02366 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D PAU_02033 oppA2; oligopeptide transport periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_01958 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02342 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02032 oppA1; oligopeptide transport periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02337 dppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02034 oppB; oligopeptide transport system permease protein oppb K15581 oppB; oligopeptide transport system permease protein D PAU_02035 oppC; oligopeptide transport system permease protein oppc K15582 oppC; oligopeptide transport system permease protein D PAU_02036 oppD; oligopeptide transport atp-binding protein oppd K15583 oppD; oligopeptide transport system ATP-binding protein D PAU_02037 oppF; oligopeptide transport atp-binding protein oppf K10823 oppF; oligopeptide transport system ATP-binding protein D PAU_04398 oxaA; similar to 60 kda inner-membrane protein yidc of escherichia coli K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAU_00344 secE; inner membrane preprotein translocase K03073 secE; preprotein translocase subunit SecE D PAU_04032 secG; protein-export membrane protein secg (preprotein translocase band subunit) (p12) K03075 secG; preprotein translocase subunit SecG D PAU_04196 secY; preprotein translocase secy subunit K03076 secY; preprotein translocase subunit SecY D PAU_03489 Hypothetical protein yajC K03210 yajC; preprotein translocase subunit YajC D PAU_01122 secA; preprotein translocase seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PAU_03729 ftsY; cell division protein ftsy K03110 ftsY; fused signal recognition particle receptor D PAU_04347 secB; protein-export protein secb K03071 secB; preprotein translocase subunit SecB D PAU_03205 ffh; signal recognition particle protein (fifty-four homolog) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:pay02030] D PAU_02685 cheD; methyl-accepting chemotaxis protein i (mcp-i) (serine chemorecepto protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAU_02684 tap; methyl-accepting chemotaxis protein iv, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D PAU_00367 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D PAU_00054 rbsB; d-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D PAU_00231 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein D PAU_02687 cheA; chemotaxis protein chea K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAU_02686 cheW; purine binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D PAU_02681 cheY; chemotaxis protein chey K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PAU_02680 cheZ; chemotaxis protein chez K03414 cheZ; chemotaxis protein CheZ D PAU_02682 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PAU_02683 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PAU_02616 fliG; flagellar motor switch protein flig K02410 fliG; flagellar motor switch protein FliG D PAU_02622 fliM; flagellar motor switch protein flim K02416 fliM; flagellar motor switch protein FliM D PAU_02623 fliN; flagellar motor switch protein flin K02417 fliN; flagellar motor switch protein FliN D PAU_02689 motA; chemotaxis mota protein K02556 motA; chemotaxis protein MotA D PAU_02688 motB1; chemotaxis motb protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:pay02040] D PAU_02614 fliE; flagellar hook-basal body complex protein flie K02408 fliE; flagellar hook-basal body complex protein FliE D PAU_02615 fliF; flagellar basal-body m-ring protein K02409 fliF; flagellar M-ring protein FliF D PAU_02616 fliG; flagellar motor switch protein flig K02410 fliG; flagellar motor switch protein FliG D PAU_02617 fliH; flagellar assembly protein flih K02411 fliH; flagellar assembly protein FliH D PAU_02618 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PAU_02619 fliJ; flagellar flij protein K02413 fliJ; flagellar protein FliJ D PAU_02620 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D PAU_02621 fliL; flagellar flil protein K02415 fliL; flagellar protein FliL D PAU_02622 fliM; flagellar motor switch protein flim K02416 fliM; flagellar motor switch protein FliM D PAU_02623 fliN; flagellar motor switch protein flin K02417 fliN; flagellar motor switch protein FliN D PAU_02624 fliO; flagellar protein flio K02418 fliO; flagellar protein FliO/FliZ D PAU_02625 fliP; flagellar biosynthetic protein flip precursor K02419 fliP; flagellar biosynthesis protein FliP D PAU_02626 fliQ; flagellar biosynthetic protein fliq K02420 fliQ; flagellar biosynthesis protein FliQ D PAU_02627 fliR; flagellar biosynthetic protein flir K02421 fliR; flagellar biosynthesis protein FliR D PAU_01886 flhE; flagellar protein K03516 flhE; flagellar protein FlhE D PAU_02665 flhA; flagellar biosynthesis protein flha K02400 flhA; flagellar biosynthesis protein FlhA D PAU_02666 flhB; flagellar biosynthetic protein flhb K02401 flhB; flagellar biosynthesis protein FlhB D PAU_02652 flgA; flagella basal body p-ring formation protein flga K02386 flgA; flagellar basal body P-ring formation protein FlgA D PAU_02651 flgB; flagellar basal-body rod protein flgb (putative proximal rod protein) K02387 flgB; flagellar basal-body rod protein FlgB D PAU_02650 flgC; flagellar basal-body rod protein flgc (putative proximal rod protein) K02388 flgC; flagellar basal-body rod protein FlgC D PAU_02649 flgD; basal-body rod modification protein flgd (flagellar protein for th initiation of hook assembly) K02389 flgD; flagellar basal-body rod modification protein FlgD D PAU_02648 flgE; flagellar hook protein flge K02390 flgE; flagellar hook protein FlgE D PAU_02647 flgF; flagellar basal-body rod protein flgf (putative proximal rod protein) K02391 flgF; flagellar basal-body rod protein FlgF D PAU_02646 flgG; flagellar basal-body rod protein flgg (distal rod protein) K02392 flgG; flagellar basal-body rod protein FlgG D PAU_02645 flgH; flagellar l-ring protein precursor (basal body l-ring protein) K02393 flgH; flagellar L-ring protein FlgH D PAU_02644 flgI; flagellar p-ring protein precursor (basal body p-ring protein) K02394 flgI; flagellar P-ring protein FlgI D PAU_02643 flgJ; peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ D PAU_02642 flgK; flagellar hook-associated protein 1 flgK K02396 flgK; flagellar hook-associated protein 1 D PAU_02641 flgL; flagellar hook-associated protein 3 (hap3) (hook-filament junctio protein) K02397 flgL; flagellar hook-associated protein 3 FlgL D PAU_02609 fliC; flagellin (flic) K02406 fliC; flagellin D PAU_02610 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D PAU_02611 fliS; flagellar protein flis K02422 fliS; flagellar secretion chaperone FliS D PAU_02612 fliT; flagellar protein flit K02423 fliT; flagellar protein FliT D PAU_02689 motA; chemotaxis mota protein K02556 motA; chemotaxis protein MotA D PAU_02688 motB1; chemotaxis motb protein K02557 motB; chemotaxis protein MotB D PAU_02653 flgM; negative regulator of flagellin synthesis (anti-sigma-28 factor) flgm K02398 flgM; negative regulator of flagellin synthesis FlgM D PAU_02654 flgN; flagellar biosynthesis protein (flagella synthesis protein flgn) K02399 flgN; flagellar biosynthesis protein FlgN D PAU_03993 similar to amino acid abc transporter K02424 tcyA; L-cystine transport system substrate-binding protein D PAU_03990 yecS; similar to amino acid abc transporter K02424 tcyA; L-cystine transport system substrate-binding protein D PAU_02607 fliZ; fliz protein K02425 fliZ; regulator of sigma S factor FliZ D PAU_03559 rpoD; rna polymerase, sigma(70) factor; regulation of proteins induced a high temperatures (rna polymerase sigma 70 factor rpod) K03086 rpoD; RNA polymerase primary sigma factor D PAU_02691 flhD; transcriptional activator flhd K02403 flhD; flagellar transcriptional activator FlhD D PAU_02690 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D PAU_03679 rpoN; rna polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D PAU_02608 fliA; rna polymerase sigma factor for flagellar operon (sigma-f factor (sigma-27) (sigma-28) K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PAU_00841 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pay01501] D PAU_02765 ompN2; outer membrane protein n (porin ompn) K09476 ompF; outer membrane pore protein F D PAU_02764 ompN1; outer membrane protein ompN K09476 ompF; outer membrane pore protein F D PAU_03425 AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D PAU_01716 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PAU_00771 ampC; ampc-type class c beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D PAU_02033 oppA2; oligopeptide transport periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_01958 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02342 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02032 oppA1; oligopeptide transport periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02337 dppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02034 oppB; oligopeptide transport system permease protein oppb K15581 oppB; oligopeptide transport system permease protein D PAU_02035 oppC; oligopeptide transport system permease protein oppc K15582 oppC; oligopeptide transport system permease protein D PAU_02036 oppD; oligopeptide transport atp-binding protein oppd K15583 oppD; oligopeptide transport system ATP-binding protein D PAU_02037 oppF; oligopeptide transport atp-binding protein oppf K10823 oppF; oligopeptide transport system ATP-binding protein D PAU_02294 blaA; ctx-m type extended-spectrum beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D PAU_03398 Acriflavin resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D PAU_03399 Acridine efflux pump K18138 acrB; multidrug efflux pump D PAU_03531 tolC; outer membrane protein tolc K12340 tolC; outer membrane protein D PAU_01889 probable outer membrane protein K12340 tolC; outer membrane protein D PAU_02198 putative outer membrane efflux protein K12340 tolC; outer membrane protein D PAU_00077 mrcA; penicillin-binding protein 1a (pbp-1a) (pbp1a) (penicillin-bindin protein a) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PAU_03162 pbpA; cell elongation, e phase; peptidoglycan synthetase; penicillin-bindin protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAU_01107 ftsI; peptidoglycan synthetase ftsi (penicillin-binding protein 3) (pbp-3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pay01502] D PAU_01115 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAU_03912 alr; alanine racemase) K01775 alr; alanine racemase [EC:5.1.1.1] D PAU_01971 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D PAU_01109 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PAU_01110 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PAU_01113 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide pyrophosphoryl-undecaprenol n-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pay01503] D PAU_01733 phoQ; sensor protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAU_01734 phoP; two-component response regulator phop K07660 phoP; two-component system, OmpR family, response regulator PhoP D PAU_01754 crcA; crca protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D PAU_01875 arnB; UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D PAU_01876 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D PAU_01877 arnA; bifunctional polymyxin resistance protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D PAU_01878 conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D PAU_01879 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosy transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D PAU_01880 conserved hypothetical protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D PAU_01881 yfbJ; upf0188 putative innermembrane protein pbge3 K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D PAU_01947 sapA; peptide transport periplasmic protein sapa K19226 sapA; cationic peptide transport system substrate-binding protein D PAU_01946 sapB; peptide transport system permease protein sapb K19227 sapB; cationic peptide transport system permease protein D PAU_01945 sapC; peptide transport system permease protein sapc K19228 sapC; cationic peptide transport system permease protein D PAU_01944 sapD; peptide transport system atp-binding protein sapd K19229 sapD; cationic peptide transport system ATP-binding protein D PAU_01943 sapF; peptide transport system atp-binding protein sapf K19230 sapF; cationic peptide transport system ATP-binding protein D PAU_00605 conserved hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D PAU_00663 cutF; copper homeostasis protein (lipoprotein) K06079 cutF; copper homeostasis protein (lipoprotein) D PAU_04310 cpxA; two-component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D PAU_04309 cpxR; transcriptional two-component response regulatory protein cpxr K07662 cpxR; two-component system, OmpR family, response regulator CpxR D PAU_04083 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAU_00595 amiC; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAU_01913 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS D PAU_00298 dsbA; thiol:disulfide interchange protein dsba precursor K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D PAU_00302 ppiA; peptidyl-prolyl cis-trans isomerase A precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PAU_03398 Acriflavin resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D PAU_03399 Acridine efflux pump K18138 acrB; multidrug efflux pump D PAU_03531 tolC; outer membrane protein tolc K12340 tolC; outer membrane protein D PAU_01889 probable outer membrane protein K12340 tolC; outer membrane protein D PAU_02198 putative outer membrane efflux protein K12340 tolC; outer membrane protein D PAU_00656 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pay01000] C 01001 Protein kinases [BR:pay01001] D PAU_02086 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D PAU_01075 wzc; tyrosine-protein kinase wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D PAU_03501 phoR; positive and negative sensor protein for pho regulon (positive an negative sensor protein for pho regulon phor) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PAU_01733 phoQ; sensor protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAU_00161 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D PAU_04310 cpxA; two-component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D PAU_01765 baeS; sensory histidine kinase protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D PAU_02989 kdpD; sensor protein (histidine kinase) K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PAU_03644 arcB; aerobic respiration control sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PAU_01446 tctE; sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PAU_02549 narX; similar to nitrate/nitrite sensor protein narx K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D PAU_00766 uhpB; two-component sensor histidine kinase uhpb, phosphorylates uhpa K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D PAU_01561 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D PAU_01559 rcsC; sensor protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D PAU_00829 barA; signal transduction histidine-protein kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PAU_02265 pvpS; pvp sensor (virulence sensor protein bvgs) K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D PAU_04020 yehU; putative 2-component sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D PAU_00178 glnL; nitrogen regulation protein nr(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PAU_01326 yfhK; two-component signal transduction system,sensor-like His kinase regulatory protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PAU_02687 cheA; chemotaxis protein chea K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAU_03782 two-component sensor/regulator precursor K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA C 01009 Protein phosphatases and associated proteins [BR:pay01009] D PAU_04264 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAU_03384 Chaperone protein htpG (Heat shock protein htpG) K04079 HSP90A; molecular chaperone HtpG D PAU_00520 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pay01002] D PAU_00556 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D PAU_03274 Pilin biogenesis protein PilD K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAU_02785 pppA; type 4 prepilin-like proteins leader peptide processing enzyme (pecti enzymes secretion protein outo) K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAU_03889 pcp; pyrrolidone-carboxylate peptidase 2 K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D PAU_01827 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PAU_02556 conserved hypothetical protein K07010 K07010; putative glutamine amidotransferase D PAU_01345 mchF; probable microcin h47 secretion atp-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D PAU_01672 spr; lipoprotein spr precursor K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D PAU_01883 nlpC; probable lipoprotein nlpc K13695 nlpC; probable lipoprotein NlpC D PAU_01457 purF; amidophosphoribosyltransferase (glutamine phosphoribosylpyrophosphat amidotransferase) (atase) (gpatase) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PAU_03647 gltB; glutamate synthase [nadph] large chain (glutamate synthase alph subunit) (nadph-gogat) (glts alpha chain) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PAU_00033 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAU_02262 wbmC; conserved hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAU_04336 wbfR; asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAU_03435 Protein thiJ K03152 thiJ; protein deglycase [EC:3.5.1.124] D PAU_02206 Transcriptional regulator, AraC family K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D PAU_02096 yopT; cysteine protease K08599 yopT; YopT peptidase [EC:3.4.22.-] D PAU_01913 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS D PAU_02769 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D PAU_02949 similar to putative membrane protein K07052 K07052; CAAX protease family protein D PAU_02761 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PAU_00108 opdA; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D PAU_00605 conserved hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D PAU_03355 Phage-related protein precursor K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D PAU_00590 ptrA; protease iii (pitrilysin) K01407 ptrA; protease III [EC:3.4.24.55] D PAU_00237 yhjJ; conserved hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-] D PAU_03985 pepA; probable cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PAU_01369 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D PAU_01817 dapE; n-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PAU_01730 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D PAU_03221 Aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D PAU_02465 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D PAU_00643 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PAU_03691 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PAU_03872 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D PAU_01156 pepP; xaa-pro aminopeptidase (x-pro aminopeptidase) (aminopeptidase p ii (app-ii) (aminoacylproline aminopeptidase) K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PAU_01923 conserved hypothetical protein K19689 ampS; aminopeptidase [EC:3.4.11.-] D PAU_00753 conserved hypothetical protein K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D PAU_04035 mrsC; ATP-binding protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PAU_01855 htpX; probable protease HTPX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D PAU_01791 yfgC; conserved hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D PAU_00651 rseP; metalloendopeptidase-protease ecfe K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D PAU_02203 similar to d-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D PAU_03656 degQ; serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-] D PAU_03658 degS; protease K04691 hhoB; serine protease DegS [EC:3.4.21.-] D PAU_01823 ptrB; protease ii (oligopeptidase b) K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D PAU_02870 dacC; penicillin-binding protein 6 (d-alanyl-d-alanine carboxypeptidas fraction c) (dd-pept (dd-carboxypeptidase) (pbp-6)idase) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAU_03165 dacA; penicillin-binding protein 5 precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAU_03982 ampH; Beta-lactamase (penicillin-binding protein amph) K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D PAU_04040 dacB; penicillin-binding protein 4 (pbp-4) [includes: d-alanyl-d-alanin carboxypeptidase (dd-peptidase) (dd-carboxypeptidase); d-alanyl-d alanine-endopeptidase (dd-endopeptidase)] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PAU_03417 ATP-dependent proteolytic subunit of clpA-ClpP serine protease, heat shock protein F21.5 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PAU_03415 ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PAU_02746 putative protease la-like protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D PAU_03927 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D PAU_01304 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PAU_01844 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PAU_01854 prc; carboxy-terminal protease for penicillin-binding protein 3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D PAU_01979 sppA; protease iv (endopeptidase iv) (signal peptide peptidase) K04773 sppA; protease IV [EC:3.4.21.-] D PAU_02071 sohB; putative Peptidase S49 K04774 sohB; serine protease SohB [EC:3.4.21.-] D PAU_00135 glpG; putative membrane protein glpg K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D PAU_04250 hslV; ATP-dependent protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D PAU_03499 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAU_01762 yegQ; similar to putative protease yegq of escherichia coli K08303 prtC; U32 family peptidase [EC:3.4.-.-] D PAU_03692 pmbA; pmba protein, involved in the maturation of antibiotic K03592 pmbA; PmbA protein D PAU_03696 tldD; tldd protein, suppresses the inhibitory activity of the carbon storage regulator (csra) K03568 tldD; TldD protein D PAU_01380 conserved hypothetical protein K06894 yfhM; alpha-2-macroglobulin D PAU_04077 hflC; lambda cii stability-governing protein hflc K04087 hflC; modulator of FtsH protease HflC D PAU_04078 hflK; protease specific for phage lambda cii repressor K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:pay01003] D PAU_03642 mtgA; mtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PAU_01381 pbpC; penicillin-binding protein 1c K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D PAU_00814 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PAU_00077 mrcA; penicillin-binding protein 1a (pbp-1a) (pbp1a) (penicillin-bindin protein a) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PAU_04131 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D PAU_04133 wecF; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D PAU_04142 wecA; undecaprenyl-phosphate alpha-n-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAU_01288 conserved hypothetical protein K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pay01005] D PAU_00656 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D PAU_00657 lpxB; lipid-A-disaccharide synthase) K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D PAU_01119 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D PAU_00654 lpxD; udp-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D PAU_00998 lpxH; udp-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D PAU_02818 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D PAU_02703 htrB; lipid a biosynthesis lauroyl acyltransferase (heat shock protein b) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D PAU_02464 msbB; lipid A biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D PAU_01673 similar to putative membrane protein yeiu of escherichia coli K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D PAU_04360 kdtA; 3-deoxy-d-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D PAU_01879 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosy transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D PAU_01754 crcA; crca protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D PAU_02522 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D PAU_02816 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D PAU_03675 kdsC; 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D PAU_03674 kdsD; arabinose 5-phosphate isomerase) K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D PAU_00363 rfaB; lipopolysaccharide 1,6-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] D PAU_04355 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D PAU_04361 kdtX; lipopolysaccharide core biosynthesis glycosyl transferase kdtx K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D PAU_04354 rfaF; adp-heptose--LPS heptosyltransferase II involved in lipopolysaccharid core biosynthesis K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D PAU_04358 rfaG; lipopolysaccharide core biosynthesis protein rfag (glucosyltransferas i) K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D PAU_00465 yibD; similar to glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D PAU_04364 rfaL; lipid a-core:surface polymer ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D PAU_04357 putative LPS biosynthesis enzyme (lipopolysaccharide core biosynthesi protein rfaq) K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D PAU_03260 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D PAU_00670 gmhB; d,d-heptose 1,7-bisphosphate phosphatase 1 K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D PAU_03547 hldE; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D PAU_04353 hldD; ADP-L-glycero-d-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D PAU_04132 wzyE; putative eca polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D PAU_04317 wblL; conserved hypothetical protein K26858 wzy; O-antigen polymerase [EC:2.4.99.27] D PAU_04142 wecA; undecaprenyl-phosphate alpha-n-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAU_04341 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pay01011] D PAU_03665 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAU_00633 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAU_04225 murB; udp-n-acetylenolpyruvoylglucosamine reductase (ec 1.1.1.158) K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PAU_01114 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PAU_01111 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PAU_01108 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PAU_01115 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAU_03912 alr; alanine racemase) K01775 alr; alanine racemase [EC:5.1.1.1] D PAU_01971 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D PAU_04226 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PAU_01110 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PAU_01113 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide pyrophosphoryl-undecaprenol n-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PAU_03553 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAU_02865 ybjG; hypothetical membrane protein ybjg (hypothetical protein ecs0921) K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAU_02502 mviN; virulence factor mvin homolog K03980 murJ; putative peptidoglycan lipid II flippase D PAU_00077 mrcA; penicillin-binding protein 1a (pbp-1a) (pbp1a) (penicillin-bindin protein a) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PAU_00814 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PAU_01381 pbpC; penicillin-binding protein 1c K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D PAU_03162 pbpA; cell elongation, e phase; peptidoglycan synthetase; penicillin-bindin protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAU_01107 ftsI; peptidoglycan synthetase ftsi (penicillin-binding protein 3) (pbp-3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAU_02870 dacC; penicillin-binding protein 6 (d-alanyl-d-alanine carboxypeptidas fraction c) (dd-pept (dd-carboxypeptidase) (pbp-6)idase) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAU_03165 dacA; penicillin-binding protein 5 precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAU_04040 dacB; penicillin-binding protein 4 (pbp-4) [includes: d-alanyl-d-alanin carboxypeptidase (dd-peptidase) (dd-carboxypeptidase); d-alanyl-d alanine-endopeptidase (dd-endopeptidase)] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PAU_03982 ampH; Beta-lactamase (penicillin-binding protein amph) K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D PAU_03642 mtgA; mtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PAU_01913 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS D PAU_02769 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D PAU_01672 spr; lipoprotein spr precursor K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D PAU_02465 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D PAU_03355 Phage-related protein precursor K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D PAU_00526 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PAU_00598 mltA; membrane-bound lytic murein transglycosylase a (murein hydrolase a) K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D PAU_03293 Membrane-bound lytic murein transglycosylase C precursor K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D PAU_00857 mltD; membrane-bound lytic murein transglycosylase d (murein hydrolase d) K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D PAU_01865 emtA; emtA K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D PAU_01322 yfhD; conserved hypothetical protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D PAU_01708 yceG; conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D PAU_03164 rlpA; rare lipoprotein a K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PAU_04083 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAU_00595 amiC; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAU_01745 ybjR; probable N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAU_01914 lpp; major outer membrane lipoprotein precursor (murein-lipoprotein) K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:pay01004] D PAU_01703 fabD; malonyl coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAU_01702 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PAU_02401 conserved hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PAU_01438 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase i (beta-ketoacyl-ac synthase i) (kas i) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PAU_04156 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_01706 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase ii K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_02671 beta-ketoacyl synthase:phosphopantetheine binding K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAU_04158 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02901 conserved hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_01704 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_03776 short-chain dehydrogenase/reductase sdr K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02257 putative 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAU_02747 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D PAU_00655 fabZ; (3r)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PAU_01942 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PAU_00982 tesA; acyl-coa thioesterase i (protease i) (lysophospholipase l1 (lecithinase b) K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D PAU_03403 Acyl-CoA thioesterase II (TEII) K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PAU_02042 conserved hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D PAU_03411 conserved hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-] D PAU_02303 irp1_HMWP1; putative peptide/polyketide synthetase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D PAU_02302 conserved hypothetical protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D PAU_00062 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAU_01237 prpE; propionate--coa ligase (propionyl-coa synthetase) K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D PAU_01099 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_02433 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_03929 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D PAU_01701 plsX; fatty acid/phospholipid synthesis protein plsx K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PAU_03555 ygiH; upf0078 membrane protein ygih K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PAU_03525 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:pay01008] D PAU_00916 conserved hypothetical protein K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains D PAU_00894 phbB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D PAU_00970 ngrA; 4'-phosphopantetheinyl tranferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D PAU_00893 phbE; enterobactin synthetase component e K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D PAU_00883 phbG; putative photobactin biosynthesis protein phbg K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D PAU_02303 irp1_HMWP1; putative peptide/polyketide synthetase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D PAU_02302 conserved hypothetical protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D PAU_02306 ybtE; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D PAU_02304 similar to irp3 protein of yersinia enterocolitica K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component D PAU_02305 irp4; yersiniabactin synthetase, thioesterase component K05374 irp4; yersiniabactin synthetase, thioesterase component C 01006 Prenyltransferases [BR:pay01006] D PAU_03438 Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PAU_04044 ispB; octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PAU_00649 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PAU_04081 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PAU_04252 menA; 1,4-dihydroxy-2-naphthoate--> dimethylmenaquinone (1,4-dihydroxy-2 naphthoate octaprenyltransferase) K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D PAU_03930 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PAU_03431 cyoE; Protoheme IX farnesyltransferase (Heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:pay01007] D PAU_00759 conserved hypothetical protein K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PAU_01411 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAU_03085 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAU_00809 yadB; glutamyl-q tRNA(asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D PAU_01938 tyrS; tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAU_00140 tyrS2; tyrosyl-trna synthetase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAU_00066 trpS; tryptophanyl-tRNA synthetase (tryptophan--tRNA ligase (trprs) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAU_01000 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAU_02501 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAU_02892 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAU_00555 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAU_03987 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAU_03156 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAU_01226 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAU_02474 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAU_02763 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAU_01387 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAU_00227 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PAU_00228 glyS; glycyl-trna synthetase beta chain (glycine--trna ligase beta chain (glyrs) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PAU_02841 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAU_00664 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAU_01866 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAU_03211 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAU_00130 conserved hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAU_01870 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAU_01871 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAU_02766 aspC; aspartate aminotransferase (transaminase a) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAU_00225 avtA; alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase transaminase c (valine-pyruvate transaminase) K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D PAU_01517 yfbQ; putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PAU_03911 tyrB; aromatic-amino-acid aminotransferase (aroat) (arat) K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PAU_02875 hisCD; putative histidine biosynthesis bifunctional protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_00616 hisC; conserved hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAU_04352 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PAU_02939 bioF; 7-keto-8-amino pelargonic acid synthetase (8-amino-7-oxononanoat synthase) K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PAU_01182 aminotransferase, class II K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PAU_03029 orf3; conserved hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAU_02208 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PAU_00305 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PAU_01497 argM; succinylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D PAU_01177 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAU_02941 bioA; 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PAU_00822 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PAU_04163 ilvE; branched-chain amino acid aminotransferase (transaminase b) (bcat) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAU_02831 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAU_01875 arnB; UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D PAU_04314 wblD; cys/met metabolism pyridoxal-phosphate-dependen enzymes:degt/dnrj/eryc1/strs aminotransferase:aromatic amino aci beta-eliminating lyase/threonine aldolase:aminotransferase, class and ii K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D PAU_04135 wecE; lipopolysaccharide biosynthesis protein wece K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D PAU_02392 conserved hypothetical protein K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pay00194] D PAU_00035 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PAU_00036 atpD; membrane-bound ATP synthase F1 sector beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PAU_00037 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PAU_00038 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PAU_00039 atpH; membrane-bound ATP synthase F1 sector delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PAU_00040 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PAU_00041 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PAU_00042 atpB; membrane-bound ATP synthase F0 sector subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PAU_00043 atpI; atp synthase protein i K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pay03000] D PAU_04300 cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_04299 dna-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_00923 hpaA; regulator of the 4hpa-hydroxylase operon K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D PAU_00530 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAU_01040 rhaS; similar to the transcriptional activator protein exsa/virf K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D PAU_00602 gcvA; lysr family regulator of gcv operon K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PAU_04149 ilvY; transcriptional activator protein regulator Lys-R K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D PAU_03892 metR; hth-type transcriptional regulator metr K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D PAU_00552 nhaR; transcriptional activator protein nhar K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D PAU_04233 oxyR; hydrogen peroxide-inducible genes activator (morphology and auto aggregation control protein) K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D PAU_01150 iciA; chromosome initiation inhibitor (oric replication inhibitor) K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PAU_01098 leuO; probable hth-type transcriptional regulator leuo K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D PAU_02358 hcaR; hca operon transcriptional activator K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator D PAU_02075 cysB; hth-type transcriptional regulator cysb (cys regulon transcriptiona activator) K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D PAU_02600 dsdC; d-serine dehydratase (deaminase) transcriptional activator dsdc K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator D PAU_03778 cbeR; lysr-type transcriptional regulatory protein K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D PAU_00134 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D PAU_00772 agaR; putative aga operon transcriptional repressor of sugar metabolism K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D PAU_00700 fucR; l-fucose operon activator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D PAU_00056 rbsR; regulator for rbs operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAU_03031 conserved hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAU_04248 cytR; hth-type transcriptional repressor cytr K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D PAU_01103 fruR; fructose repressor (catabolite repressor/activator) K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D PAU_01356 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D PAU_01927 purR; hth-type transcriptional repressor purr (purine nucleotide synthesi repressor) (pur regulon repressor) K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D PAU_03868 gntR; regulator of gluconate operon K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D PAU_01422 hutC; hutc protein (putative gntr-family transcriptional regulatory protein (putative repressor) K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D PAU_01969 fadR; fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D PAU_01137 pdhR; transcriptional regulator, gntr family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PAU_01175 regulatory protein, gntr K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PAU_00121 uxuR; uxu operon transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D PAU_03397 AcrAB operon repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D PAU_04376 slmA; transcriptional repressor tetr-type K05501 slmA; TetR/AcrR family transcriptional regulator D PAU_02909 ydhM; putative hth-type transcriptional regulator ydhm K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PAU_04231 yijC; similar to tetr-family transcriptional regulatory protein yijc o escherichia coli K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D PAU_02923 ybiH; putative transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D PAU_00047 asnC; regulatory protein asnc K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D PAU_02845 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PAU_03408 HTH-type transcriptional regulator ybaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D PAU_01435 lrp; leucine-responsive regulatory protein K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon D PAU_00252 sdiA1; similar to probable transcription regulator SdiA of Escherichia coli K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAU_00255 sdiA2; similar to probable transcription regulator SdiA of Escherichia coli K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAU_00379 malT; hth-type transcriptional regulator malt (atp-dependent transcriptiona activator malt) K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D PAU_01934 slyA; transcriptional regulator slya K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D PAU_02224 slyA; probable transcriptional regulator, marr family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D PAU_03183 mprA; regulator of plasmid mcrb operon K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D PAU_00987 cueR; similar to putative transcriptional regulator ybbi of escherichi coli K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PAU_04189 zntR; hth-type transcriptional regulator zntr (zn(ii)-responsive regulato of znta) K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D PAU_03083 fur; ferric uptake transcription regulator (ferric uptake regulator) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PAU_03925 zur; zinc uptake regulation protein (zinc uptake regulator) K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D PAU_00420 iclR; acebak operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D PAU_00306 crp; catabolite gene activator (camp receptor protein) (camp-regulator protein) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PAU_02371 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PAU_01774 similar to transcription regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D PAU_01361 iscR; hth-type transcriptional regulator iscr K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D PAU_04075 yjeB; conserved hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D PAU_02196 arsR; transcriptional repressor of chromosomal ars operon K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PAU_02444 hexR; hex regulon repressor K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PAU_04224 birA; bifunctional protein [includes: biotin operon repressor; biotin [acetyl-coa-carboxylase] synthetase (biotin-protein ligase)] K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PAU_03714 fis; dna-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PAU_00527 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D PAU_01233 prpR; propionate catabolism operon regulatory protein K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D PAU_01004 putative phage transcriptional regulator K07724 ner; Ner family transcriptional regulator D PAU_04047 sugar fermentation stimulation protein b (ner-like protein) K07724 ner; Ner family transcriptional regulator D PAU_00459 putative DNA-binding protein K07724 ner; Ner family transcriptional regulator D PAU_03919 sugar fermentation stimulation protein b (ner-like protein) K07724 ner; Ner family transcriptional regulator D PAU_00842 pln; similar to sugar fermentation stimulation protein b K07724 ner; Ner family transcriptional regulator D PAU_00862 sugar fermentation stimulation protein b (ner-like protein) K07724 ner; Ner family transcriptional regulator D PAU_03618 conserved hypothetical Protein K07724 ner; Ner family transcriptional regulator D PAU_03980 transcriptional regulatory protein K07724 ner; Ner family transcriptional regulator D PAU_01093 sgrR; hth-type transcriptional regulator sgrr K11925 sgrR; SgrR family transcriptional regulator D PAU_00522 nadR; transcriptional regulator nadr K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D PAU_00435 hipB; transcriptional regulator, hipb ortholog K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D PAU_03132 similar to dica, regulator of dicb encoded by prophage cp-933 (putative regulatory protein) K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D PAU_00583 ygjM; conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D PAU_03233 Similar to C-terminal region of formate hydrogenlyase transcriptional activator K12146 hyfR; hydrogenase-4 transcriptional activator D PAU_02947 modE; transcriptional regulator mode K02019 modE; molybdate transport system regulatory protein D PAU_01639 conserved hypothetical protein K07726 K07726; putative transcriptional regulator D PAU_03616 conserved hypothetical Protein K07726 K07726; putative transcriptional regulator D PAU_00768 conserved hypothetical protein K07726 K07726; putative transcriptional regulator D PAU_03232 conserved hypothetical protein K07726 K07726; putative transcriptional regulator D PAU_01133 conserved hypothetical protein K07727 K07727; putative transcriptional regulator D PAU_03131 cro; cro protein (putative regulatory protein)from phage K07729 K07729; putative transcriptional regulator D PAU_03947 conserved hypothetical protein K07729 K07729; putative transcriptional regulator D PAU_04245 metJ; met repressor (met regulon regulatory protein metj) K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D PAU_02606 putA; proline dehydrogenase (proline oxidase)/delta-1-pyrroline-5 carboxylate dehydrogenase (p5c dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PAU_00193 relB; negative regulator of translation relb protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D PAU_00548 bglG; cryptic beta-glucoside bgl operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D PAU_03423 BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D PAU_03877 rfaH; transcriptional activator rfah K05785 rfaH; transcriptional antiterminator RfaH D PAU_04049 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D PAU_03091 nagC; n-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor D PAU_02182 mlc; putative ROK-like transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D PAU_01956 tyrR; transcriptional regulatory protein tyrr K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D PAU_01794 gcvR; glycine cleavage system transcriptional repressor (gcv opero repressor) K03567 gcvR; glycine cleavage system transcriptional repressor D PAU_01948 pspF; psp operon transcriptional activator pspf K03974 pspF; psp operon transcriptional activator D PAU_01951 pspC; phage shock protein c K03973 pspC; phage shock protein C D PAU_01470 lsrR; putative transcriptional regulator, sorc family (putative sorc-typ transcriptional regulator) K11531 lsrR; lsr operon transcriptional repressor D PAU_03684 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase D PAU_01007 alpA1; predicted phage transcriptional regulator K07733 alpA; prophage regulatory protein D PAU_03977 alpA1; putative dna binding protein K07733 alpA; prophage regulatory protein D PAU_03965 rox; putative regulatory protein K07733 alpA; prophage regulatory protein D PAU_03277 conserved hypothetical protein K07735 algH; putative transcriptional regulator D PAU_00810 dksA; dnak suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D PAU_03485 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D PAU_01104 mraZ; conserved hypothetical protein mraz K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:pay03021] D PAU_04191 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PAU_00350 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PAU_00351 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PAU_00210 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PAU_03559 rpoD; rna polymerase, sigma(70) factor; regulation of proteins induced a high temperatures (rna polymerase sigma 70 factor rpod) K03086 rpoD; RNA polymerase primary sigma factor D PAU_00692 rpoS; rna polymerase sigma factor (sigma-38) K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D PAU_01299 rpoE; rna polymerase, sigma-e factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PAU_03224 Similar to sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D PAU_03939 fecI; probable rna polymerase sigma factor feci K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D PAU_03726 rpoH; component of rna polymerase, sigma 32 factor K03089 rpoH; RNA polymerase sigma-32 factor D PAU_03679 rpoN; rna polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D PAU_02608 fliA; rna polymerase sigma factor for flagellar operon (sigma-f factor (sigma-27) (sigma-28) K02405 fliA; RNA polymerase sigma factor FliA D PAU_00573 rapA; probable ATP-dependent RNA helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D PAU_04030 nusA; n utilization substance protein a (nusa protein) (l factor) K02600 nusA; transcription termination/antitermination protein NusA D PAU_03482 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D PAU_00345 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D PAU_03651 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D PAU_03650 sspB; stringent starvation protein b K03600 sspB; stringent starvation protein B D PAU_01300 rseA; sigma-e factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA D PAU_01301 rseB; sigma-e factor regulatory protein rseb K03598 rseB; sigma-E factor negative regulatory protein RseB D PAU_01302 rseC; sigma-e factor regulatory protein rsec K03803 rseC; sigma-E factor negative regulatory protein RseC D PAU_00810 dksA; dnak suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D PAU_04038 greA; transcription elongation factor grea (transcript cleavage facto grea) K03624 greA; transcription elongation factor GreA D PAU_00155 greB; transcription elongation factor greb (transcript cleavage facto greb) K04760 greB; transcription elongation factor GreB D PAU_04143 rho; transcription termination factor K03628 rho; transcription termination factor Rho D PAU_00662 rof; rho-binding antiterminator protein K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:pay03019] D PAU_01696 rne; rnase e, membrane attachment, mrna turnover, maturation 5s rna (rnas e) K08300 rne; ribonuclease E [EC:3.1.26.12] D PAU_03699 cafA; ribonuclease g (rnase g) (cytoplasmic axial filament protein) K08301 rng; ribonuclease G [EC:3.1.26.-] D PAU_01305 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAU_04074 rnr; ribonuclease r (rnase r) (vacb protein) K12573 rnr; ribonuclease R [EC:3.1.13.1] D PAU_04088 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D PAU_04145 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D PAU_02922 rhlE; putative atp-dependent rna helicase rhle K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PAU_04023 deaD; cold-shock dead box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PAU_04111 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PAU_00841 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAU_04025 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PAU_04143 rho; transcription termination factor K03628 rho; transcription termination factor Rho D PAU_04264 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAU_00543 dnaK; chaperone hsp70, autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK D PAU_03756 groL; 60 kda chaperonin (protein cpn60) (groel protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAU_04080 hfq; hfq subunit of rna-binding homohexamer that affects many cellula processes K03666 hfq; host factor-I protein D PAU_01777 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PAU_00808 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D PAU_00579 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D PAU_03210 Carbon storage regulator K03563 csrA; carbon storage regulator D PAU_04253 rraA; regulator of ribonuclease activity a K02553 rraA; regulator of ribonuclease activity A D PAU_03996 yjgD; conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B D PAU_03682 conserved hypothetical Protein K06958 rapZ; RNase adapter protein RapZ D PAU_02416 hrpA; helicase, atp-dependent (atp-dependent helicase hrpa) K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D PAU_00813 hrpB; helicase, atp-dependent (atp-dependent helicase) K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:pay03011] D PAU_02828 rpsA; 30s ribosomal protein s1 K02945 RP-S1; small subunit ribosomal protein S1 D PAU_00644 rpsB; 30s ribosomal protein s2 K02967 RP-S2; small subunit ribosomal protein S2 D PAU_04209 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PAU_04192 rpsD; 30s ribosomal subunit protein s4 K02986 RP-S4; small subunit ribosomal protein S4 D PAU_04199 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PAU_04072 rpsF; 30s ribosomal protein s6 K02990 RP-S6; small subunit ribosomal protein S6 D PAU_00340 rpsG; 30s ribosomal subunit protein s7 K02992 RP-S7; small subunit ribosomal protein S7 D PAU_04202 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PAU_03652 rpsI; 30s ribosomal subunit protein s9 K02996 RP-S9; small subunit ribosomal protein S9 D PAU_04216 rpsJ; 30s ribosomal subunit protein s10 K02946 RP-S10; small subunit ribosomal protein S10 D PAU_04193 rpsK; 30s ribosomal subunit protein s11 K02948 RP-S11; small subunit ribosomal protein S11 D PAU_00339 rpsL; 30s ribosomal protein s12 K02950 RP-S12; small subunit ribosomal protein S12 D PAU_04194 rpsM; 30s ribosomal subunit protein s13 K02952 RP-S13; small subunit ribosomal protein S13 D PAU_04203 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PAU_04026 rpsO; 30s ribosomal subunit protein s15 K02956 RP-S15; small subunit ribosomal protein S15 D PAU_03204 rpsP; 30s ribosomal protein s16 K02959 RP-S16; small subunit ribosomal protein S16 D PAU_04207 rpsQ; putative 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PAU_04070 rpsR; 30s ribosomal subunit protein s18 K02963 RP-S18; small subunit ribosomal protein S18 D PAU_04211 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PAU_00553 rpsT; 30s ribosomal protein s20 K02968 RP-S20; small subunit ribosomal protein S20 D PAU_03557 rpsU; 30s ribosomal subunit protein s21 K02970 RP-S21; small subunit ribosomal protein S21 D PAU_00347 rplA; 50s ribosomal subunit protein l1 K02863 RP-L1; large subunit ribosomal protein L1 D PAU_04212 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PAU_04215 rplC; 50s ribosomal protein l3 K02906 RP-L3; large subunit ribosomal protein L3 D PAU_04214 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PAU_04204 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PAU_04201 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PAU_04069 rplI; 50s ribosomal protein l9 K02939 RP-L9; large subunit ribosomal protein L9 D PAU_00348 rplJ; 50s ribosomal subunit protein l10 K02864 RP-L10; large subunit ribosomal protein L10 D PAU_00346 rplK; 50s ribosomal protein l11 K02867 RP-L11; large subunit ribosomal protein L11 D PAU_00349 rplL; 50s ribosomal subunit protein l7/l12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PAU_03653 rplM; 50s ribosomal protein l13 K02871 RP-L13; large subunit ribosomal protein L13 D PAU_04206 rplN; 50s ribosomal subunit protein l14 K02874 RP-L14; large subunit ribosomal protein L14 D PAU_04197 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PAU_04208 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PAU_04190 rplQ; 50s ribosomal subunit protein l17 K02879 RP-L17; large subunit ribosomal protein L17 D PAU_04200 rplR; 50s ribosomal protein l18 K02881 RP-L18; large subunit ribosomal protein L18 D PAU_03201 rplS; 50s ribosomal protein l19 K02884 RP-L19; large subunit ribosomal protein L19 D PAU_01869 rplT; 50s ribosomal protein l20 K02887 RP-L20; large subunit ribosomal protein L20 D PAU_04043 rplU; 50s ribosomal protein l21 K02888 RP-L21; large subunit ribosomal protein L21 D PAU_04210 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PAU_04213 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PAU_04205 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PAU_04042 rpmA; 50s ribosomal protein l27 K02899 RP-L27; large subunit ribosomal protein L27 D PAU_04371 rpmB; 50s ribosomal protein l28 K02902 RP-L28; large subunit ribosomal protein L28 D PAU_04198 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PAU_00031 rpmE2; 50s ribosomal protein l31 type b K02909 RP-L31; large subunit ribosomal protein L31 D PAU_04246 rpmE; 50s ribosomal protein l31 K02909 RP-L31; large subunit ribosomal protein L31 D PAU_01700 rpmF; 50s ribosomal protein l32 K02911 RP-L32; large subunit ribosomal protein L32 D PAU_04370 rpmG; 50s ribosomal protein l33 K02913 RP-L33; large subunit ribosomal protein L33 D PAU_04401 rpmH; 50s ribosomal protein l34 K02914 RP-L34; large subunit ribosomal protein L34 D PAU_01868 rpmI; 50s ribosomal protein l35 K02916 RP-L35; large subunit ribosomal protein L35 D PAU_00030 rpmJ; 50s ribosomal protein l36 2 K02919 RP-L36; large subunit ribosomal protein L36 D PAU_01665 rplY; 50s ribosomal protein l25 K02897 RP-L25; large subunit ribosomal protein L25 D 5S_rRNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-7 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-6 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-6 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-3 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-4 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-5 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pay03009] D PAU_01305 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAU_04088 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D PAU_01306 era; gtp-binding protein era K03595 era; GTPase D PAU_04041 yhbZ; similar to hypothetical gtp-binding protein yhbz of escherichia coli K03979 obgE; GTPase [EC:3.6.5.-] D PAU_00810 dksA; dnak suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D PAU_04030 nusA; n utilization substance protein a (nusa protein) (l factor) K02600 nusA; transcription termination/antitermination protein NusA D PAU_03482 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D PAU_00345 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D PAU_01668 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D PAU_00567 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PAU_04179 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PAU_00487 rsmC; ribosomal rna small subunit methyltransferase c (rrna (guanine-n2-) methyltransferase) (16s rrna m2g1207 methyltransferase) K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D PAU_03730 conserved hypothetical Protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D PAU_03275 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D PAU_00044 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PAU_01105 mraW; s-adenosyl-l-methionine-dependent methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PAU_03637 conserved hypothetical Protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D PAU_00107 yhiQ; conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D PAU_01832 rrmA; ribosomal rna large subunit methyltransferase a K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D PAU_04073 rlmB; 23S rRNA (guanosine-2'-o-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D PAU_04036 rrmJ; ribosomal RNA large subunit methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D PAU_03161 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D PAU_00290 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D PAU_02753 ycbY; conserved hypothetical protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D PAU_00604 ygdE; putative RNA 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D PAU_01383 yfgB; conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D PAU_00830 rumA; 23S rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D PAU_02861 rumB; 23S rRNA (uracil-5-)-methyltransferase RumB K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D PAU_00572 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PAU_02065 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D PAU_01697 rluC; 23S rRNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D PAU_03192 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PAU_01739 rluE; pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D PAU_03186 yfiF; similar to putative trna/rrna methyltransferase yfif escherichia coli K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D PAU_00489 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PAU_02503 rimJ; ribosomal-protein-alanine acetyltransferase (acetylating enzyme for n terminal of ribosomal protein s5) K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D PAU_02219 conserved hypothetical protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D PAU_03203 rimM; 16s rrna processing protein rimm K02860 rimM; 16S rRNA processing protein RimM D PAU_02835 ycaO; conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D PAU_03712 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D PAU_01426 conserved hypothetical protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D PAU_01732 ycfD; conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D PAU_01696 rne; rnase e, membrane attachment, mrna turnover, maturation 5s rna (rnas e) K08300 rne; ribonuclease E [EC:3.1.26.12] D PAU_03699 cafA; ribonuclease g (rnase g) (cytoplasmic axial filament protein) K08301 rng; ribonuclease G [EC:3.1.26.-] D PAU_03278 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D PAU_04023 deaD; cold-shock dead box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PAU_01296 srmB; srmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D PAU_04089 yjeQ; conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PAU_01390 engA; gtp-binding protein enga (double era-like domain protein) K03977 engA; GTPase D PAU_04079 hflX; gtp-binding protein hflx K03665 hflX; GTPase D PAU_04174 conserved hypothetical Protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PAU_00209 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PAU_04028 rbfA; ribosome-binding factor a K02834 rbfA; ribosome-binding factor A D PAU_04031 yhbC; conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP D PAU_01001 conserved hypothetical protein K14761 rlbA; ribosome-associated protein D PAU_03160 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D PAU_03147 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D PAU_04037 yhbY; conserved hypothetical protein K07574 yhbY; RNA-binding protein D PAU_03693 yjgA; conserved hypothetical protein K09889 yjgA; ribosome-associated protein D PAU_03680 yhbH; probable sigma(54) modulation protein (orf3) (orf95) K05808 hpf; ribosome hibernation promoting factor D PAU_03194 conserved hypothetical protein K05809 raiA; ribosome-associated inhibitor A D PAU_02542 ychF; conserved hypothetical protein K06942 ychF; ribosome-binding ATPase D PAU_01699 yceD; conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pay03016] D PAU_03506 ribonuclease i-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D PAU_03552 cca; multifunctional cca protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D PAU_00438 conserved hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D PAU_01411 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAU_00664 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAU_00555 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAU_03156 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAU_02892 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAU_03085 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAU_02501 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAU_01226 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAU_02474 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAU_03211 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAU_00130 conserved hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAU_02763 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAU_01866 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAU_02841 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAU_01000 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAU_03987 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAU_01387 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAU_01870 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAU_01871 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAU_01938 tyrS; tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAU_00140 tyrS2; tyrosyl-trna synthetase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAU_00066 trpS; tryptophanyl-tRNA synthetase (tryptophan--tRNA ligase (trprs) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAU_00184 dtd; d-tyrosyl-tRNA(tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PAU_01712 hinT; similar to histidine triad-like protein ycff of escherichia coli K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PAU_03290 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D PAU_00665 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D PAU_01451 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PAU_04027 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PAU_00688 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D PAU_01362 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_00158 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_04154 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_04174 conserved hypothetical Protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PAU_04081 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PAU_04397 trmE; trna modification gtpase trme K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D PAU_00045 gidA; trna uridine 5-carboxymethylaminomethyl modification enzyme gid (glucose-inhibited division protein a) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PAU_01981 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D PAU_04060 cysQ; protein cysq K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PAU_04400 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D PAU_01931 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D PAU_04378 rph; ribonuclease ph K00989 rph; ribonuclease PH [EC:2.7.7.56] D PAU_02113 rnb; exoribonuclease 2 K01147 rnb; exoribonuclease II [EC:3.1.13.1] D PAU_02432 rnd; ribonuclease d (rnase d) K03684 rnd; ribonuclease D [EC:3.1.13.5] D PAU_00524 yjjK; abc transporter atp-binding protein yjjk K06020 ettA; energy-dependent translational throttle protein EttA D PAU_00759 conserved hypothetical protein K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PAU_00227 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PAU_00228 glyS; glycyl-trna synthetase beta chain (glycine--trna ligase beta chain (glyrs) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PAU_00809 yadB; glutamyl-q tRNA(asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D PAU_02882 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D PAU_01320 similar to ecoli yfhc protein, tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D PAU_02223 conserved hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D PAU_03915 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D PAU_03713 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D PAU_02921 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D PAU_03145 miaB; trna-methylthiotransferase miab protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D PAU_02476 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D PAU_02477 yecP; conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D PAU_02814 smtA; s-adenosylmethionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D PAU_04228 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D PAU_03202 trmD; tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PAU_03186 yfiF; similar to putative trna/rrna methyltransferase yfif escherichia coli K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D PAU_01360 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D PAU_04344 yibK; hypothetical tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D PAU_01297 yfiC; conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D PAU_00637 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D PAU_00572 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PAU_01737 trmU; trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PAU_01964 ydaO; conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D PAU_03736 tusA; sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PAU_00338 tusB; protein tusb (trna 2-thiouridine synthesizing protein b) K07237 tusB; tRNA 2-thiouridine synthesizing protein B D PAU_00337 tusC; protein tusc (trna 2-thiouridine synthesizing protein c) K07236 tusC; tRNA 2-thiouridine synthesizing protein C D PAU_00336 tusD; sulfurtransferase tusd K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D PAU_02731 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D PAU_01364 iscA; iron-binding protein isca (iron-sulfur cluster assembly protein) K13628 iscA; iron-sulfur cluster assembly protein D PAU_01207 ygfZ; conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ D PAU_00695 miaE; trna-(ms[2]io[6]a)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D PAU_01433 yfcK; conserved hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D PAU_03491 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D PAU_03410 Queuosine biosynthesis protein queC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PAU_00676 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PAU_00675 ygcF; conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PAU_00612 queF; conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PAU_04085 yjeS; conserved hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D PAU_03853 conserved hypothetical Protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D PAU_03490 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D PAU_03436 Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PAU_00661 tilS; tRNA (ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D PAU_01814 ypfI; putative acyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D PAU_02436 yeaZ; conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D PAU_03556 gcp; o-sialoglycoprotein endopeptidase (glycoprotease) K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D PAU_04084 yjeE; conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D PAU_00599 conserved hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D PAU_04074 rnr; ribonuclease r (rnase r) (vacb protein) K12573 rnr; ribonuclease R [EC:3.1.13.1] D PAU_04025 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pay03012] D PAU_02083 yciH; bacterial translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1 D PAU_04029 infB; translation initiation factor if-2 K02519 infB; translation initiation factor IF-2 D PAU_01867 infC; translation initiation factor if-3 K02520 infC; translation initiation factor IF-3 D PAU_00326 yheS; conserved hypothetical protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D PAU_00645 tsf; elongation factor ts (ef-ts) K02357 tsf; elongation factor Ts D PAU_00342 tufA; elongation factor tu-b (ef-tu-b) K02358 tuf; elongation factor Tu D PAU_04221 tufA; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu D PAU_00341 fusA; elongation factor g (ef-g) K02355 fusA; elongation factor G D PAU_04384 selB; selenocysteine-specific elongation factor (selb translation factor) K03833 selB; selenocysteine-specific elongation factor D PAU_02525 prfA; peptide chain release factor rf-1 K02835 prfA; peptide chain release factor 1 D PAU_00647 frr; ribosome recycling factor (ribosome-releasing factor) (rrf) K02838 frr; ribosome recycling factor D PAU_01181 modification methylase hemk precursor K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PAU_02524 hemK; protein methyltranferase hemk (protein-glutamine n methyltransferase) K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PAU_02541 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D PAU_02850 infA; protein chain initiation factor if-1 K02518 infA; translation initiation factor IF-1 D PAU_03753 efp; elongation factor p (ef-p) K02356 efp; elongation factor P D PAU_01675 yeiP; elongation factor p-like protein K02356 efp; elongation factor P D PAU_03743 poxA; putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D PAU_03754 conserved hypothetical Protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D PAU_02168 conserved hypothetical protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D PAU_01429 conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D PAU_01225 prfB; peptide chain release factor 2 (rf-2) K02836 prfB; peptide chain release factor 2 D PAU_00490 prfC; peptide chain release factor 3 (rf-3) K02837 prfC; peptide chain release factor 3 D PAU_04188 conserved hypothetical Protein K09890 arfA; alternative ribosome-rescue factor C 03110 Chaperones and folding catalysts [BR:pay03110] D PAU_02851 clpA; atp-dependent clp protease atp-binding subunit clpa K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D PAU_03190 clpB; chaperone clpb K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PAU_03416 ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PAU_04251 hslU; atp-dependent hsl protease atp-binding subunit hslu K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D PAU_03384 Chaperone protein htpG (Heat shock protein htpG) K04079 HSP90A; molecular chaperone HtpG D PAU_00543 dnaK; chaperone hsp70, autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK D PAU_01366 hscA; chaperone protein hsca (hsc66) K04044 hscA; molecular chaperone HscA D PAU_03756 groL; 60 kda chaperonin (protein cpn60) (groel protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAU_00544 dnaJ; chaperone with dnak; heat shock protein K03686 dnaJ; molecular chaperone DnaJ D PAU_00571 djlA; dnaj-like protein djla K05801 djlA; DnaJ like chaperone protein D PAU_01365 hscB; co-chaperone protein hscb (hsc20) K04082 hscB; molecular chaperone HscB D PAU_00082 hslO; 33 kda chaperonin (heat shock protein 33 homolog) (hsp33) K04083 hslO; molecular chaperone Hsp33 D PAU_00081 hslR; ribosome-associated heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D PAU_03757 groS; 10 kda chaperonin (protein cpn10) (groes protein) K04078 groES; chaperonin GroES D PAU_04035 mrsC; ATP-binding protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PAU_00042 atpB; membrane-bound ATP synthase F0 sector subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PAU_00203 afaB; afab K07346 fimC; fimbrial chaperone protein D PAU_04347 secB; protein-export protein secb K03071 secB; preprotein translocase subunit SecB D PAU_04308 cpxP; conserved hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D PAU_01599 dmsD; twin-arginine leader-binding protein dmsd K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D PAU_03084 chb; chitobiase (n-acetyl-beta-glucosaminidase)-beta-n acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PAU_00302 ppiA; peptidyl-prolyl cis-trans isomerase A precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PAU_00999 ppiB; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D PAU_03413 Peptidyl-prolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D PAU_00333 fkpA; fkbp-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D PAU_04061 fklB; fkbp-type 22 kda peptidyl-prolyl cis-trans isomerase (ppiase (rotamase) (fkbp22) K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D PAU_00558 fkpB; peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D PAU_00330 slyD; fkbp-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D PAU_00569 surA; chaperone SurA precursor (peptidyl-prolyl cis-trans isomerase) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D PAU_04144 trxA; thioredoxin 1 (trx1) (trx) K03671 TXN; thioredoxin D PAU_00984 ybbN; conserved hypothetical protein K05838 ybbN; putative thioredoxin D PAU_02864 grxA; glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotid reductase K03674 grxA; glutaredoxin 1 D PAU_01930 grxD; glutaredoxin-4 (grx4) (monothiol glutaredoxin) K07390 grxD; monothiol glutaredoxin D PAU_00298 dsbA; thiol:disulfide interchange protein dsba precursor K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D PAU_01967 dsbB; disulfide bond formation protein b (disulfide oxidoreductase) K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D PAU_01212 dsbC; thiol:disulfide interchange protein dsbc precursor K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D PAU_03763 dsbD; thiol:disulfide interchange protein dsbd (c-type cytochrome biogenesi protein cycz) (inner membrane copper tolerance protein) K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] C 04131 Membrane trafficking [BR:pay04131] D PAU_01382 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAU_02194 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PAU_01974 gapA; glyceraldehyde-3-phosphate dehydrogenase a (gapdh-a) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAU_02950 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAU_01920 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAU_02458 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAU_03384 Chaperone protein htpG (Heat shock protein htpG) K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:pay04121] C 03051 Proteasome [BR:pay03051] D PAU_03384 Chaperone protein htpG (Heat shock protein htpG) K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:pay03032] D PAU_00860 rnhA; putative DNA replication ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PAU_04300 cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_04299 dna-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_00403 dbhA; dna-binding protein hu-alpha (ns2) (hu-2) K05787 hupA; DNA-binding protein HU-alpha D PAU_03414 DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta D PAU_01872 ihfA; integration host factor subunit alpha (ihf-alpha) K04764 ihfA; integration host factor subunit alpha D PAU_02827 ihfB; integration host factor beta-subunit (ihf-beta) K05788 ihfB; integration host factor subunit beta D PAU_00001 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D PAU_03913 dnaB; replicative dna helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PAU_03558 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PAU_03307 gene0080; putative dna primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PAU_03311 gene0083; putative dna primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PAU_03907 ssb; single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein D PAU_00659 dnaE; dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAU_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAU_03986 holC; dna polymerase iii, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAU_03158 holA; dna-directed dna polymerase iii delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAU_01710 holB; dna-directed dna polymerase iii delta' chain K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAU_00861 dnaQ; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAU_03388 DNA polymerase III subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAU_00488 holD; DNA polymerase III, Psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAU_01845 holE; dna polymerase iii, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAU_00658 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PAU_00299 polA; dna polymerase I polA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAU_01408 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_00221 yicF; similar to putative dna ligase-like protein yicf of escherichia coli K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_02167 tus; dna replication terminus site-binding protein (ter protein) (te binding protein) K10748 tus; DNA replication terminus site-binding protein D PAU_00069 dam; DNA adenine methylase (deoxyadenosyl-methyltransferase (dna adenine methyltransferase) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_04395 n6 adenine-specific dna methyltransferase, d12 class K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_04304 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_02995 seqA; seqa protein, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication D PAU_01789 hda; dnaa-homolog protein hda K10763 hda; DnaA-homolog protein D PAU_01558 gyrA; dna gyrase subunit a K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PAU_00004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PAU_03526 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PAU_03527 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PAU_02074 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PAU_01982 topB; DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pay03036] D PAU_04300 cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_04299 dna-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_01305 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAU_03196 hns; dna-binding protein h-ns (histone-like protein hlp-ii) (protein h1 (protein b1) K03746 hns; DNA-binding protein H-NS D PAU_02028 hns; dna-binding protein h-ns (histone-like protein hlp-ii) K03746 hns; DNA-binding protein H-NS D PAU_00403 dbhA; dna-binding protein hu-alpha (ns2) (hu-2) K05787 hupA; DNA-binding protein HU-alpha D PAU_03414 DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta D PAU_01872 ihfA; integration host factor subunit alpha (ihf-alpha) K04764 ihfA; integration host factor subunit alpha D PAU_02827 ihfB; integration host factor beta-subunit (ihf-beta) K05788 ihfB; integration host factor subunit beta D PAU_00530 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAU_00001 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D PAU_03640 diaA; dnaa initiator-associating protein diaa K12961 diaA; DnaA initiator-associating protein D PAU_02733 yccV; conserved hypothetical protein K11940 hspQ; heat shock protein HspQ D PAU_02913 dps; stationary phase nucleoid protein K04047 dps; starvation-inducible DNA-binding protein D PAU_03714 fis; dna-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PAU_04080 hfq; hfq subunit of rna-binding homohexamer that affects many cellula processes K03666 hfq; host factor-I protein D PAU_01150 iciA; chromosome initiation inhibitor (oric replication inhibitor) K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PAU_02845 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PAU_01664 ndpA; conserved hypothetical protein K06899 ndpA; nucleoid-associated protein D PAU_02811 mukB; chromosome partition protein mukb (structural maintenance o chromosome-related protein) K03632 mukB; chromosome partition protein MukB D PAU_02812 mukE; chromosome partition protein muke K03804 mukE; chromosome partition protein MukE D PAU_02813 mukF; ca2+-binding protein involved in chromosome partitioning K03633 mukF; chromosome partition protein MukF D PAU_01117 ftsA; cell division protein ftsa K03590 ftsA; cell division protein FtsA D PAU_00685 ftsB; cell division protein ftsb K05589 ftsB; cell division protein FtsB D PAU_03728 ftsE; cell division atp-binding protein ftse K09812 ftsE; cell division transport system ATP-binding protein D PAU_01107 ftsI; peptidoglycan synthetase ftsi (penicillin-binding protein 3) (pbp-3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAU_02844 ftsK; dna translocase ftsk K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PAU_01106 ftsL; cell division protein ftsl K03586 ftsL; cell division protein FtsL D PAU_04249 ftsN; cell division protein ftsn K03591 ftsN; cell division protein FtsN D PAU_01116 ftsQ; cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ D PAU_01112 ftsW; membrane protein ftsw, involved in peptidoglycan biosynthesis K03588 ftsW; cell division protein FtsW D PAU_03727 ftsX; cell division protein ftsx K09811 ftsX; cell division transport system permease protein D PAU_01118 ftsZ; cell division protein ftsz K03531 ftsZ; cell division protein FtsZ D PAU_01407 zipA; cell division protein zipa homolog K03528 zipA; cell division protein ZipA D PAU_01154 ygfE; conserved hypothetical protein K09888 zapA; cell division protein ZapA D PAU_04254 yiiU; conserved hypothetical protein K09892 zapB; cell division protein ZapB D PAU_02758 conserved hypothetical protein K18657 zapC; cell division protein ZapC D PAU_01125 yacF; conserved hypothetical protein K18778 zapD; cell division protein ZapD D PAU_03654 conserved hypothetical Protein K06916 zapE; cell division protein ZapE D PAU_04083 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAU_00595 amiC; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAU_03398 Acriflavin resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D PAU_02429 minC; septum site-determining protein minc K03610 minC; septum site-determining protein MinC D PAU_02430 minD; septum site-determining protein (cell division inhibitor mind) K03609 minD; septum site-determining protein MinD D PAU_02431 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D PAU_02743 sulA; cell division inhibitor sula K13053 sulA; cell division inhibitor SulA D PAU_04376 slmA; transcriptional repressor tetr-type K05501 slmA; TetR/AcrR family transcriptional regulator D PAU_02995 seqA; seqa protein, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication D PAU_03703 mreB; rod shape-determining protein mreb K03569 mreB; rod shape-determining protein MreB and related proteins D PAU_03702 mreC; rod shape-determining protein mrec K03570 mreC; rod shape-determining protein MreC D PAU_03701 mreD; rod shape-determining protein mred K03571 mreD; rod shape-determining protein MreD D PAU_03163 rodA; rod shape-determining protein roda K05837 rodA; rod shape determining protein RodA D PAU_pPAU1_0007 putative plasmid stability protein K03496 parA; chromosome partitioning protein D PAU_03526 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PAU_03527 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PAU_00045 gidA; trna uridine 5-carboxymethylaminomethyl modification enzyme gid (glucose-inhibited division protein a) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PAU_00044 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PAU_04119 xerC; tyrosine recombinase xerc K03733 xerC; integrase/recombinase XerC D PAU_01211 xerD; tyrosine recombinase xerd K04763 xerD; integrase/recombinase XerD D PAU_03308 gene0081; similar to phage integrase/recombinase K04763 xerD; integrase/recombinase XerD D PAU_03312 gene0084; similar to phage integrase/recombinase K04763 xerD; integrase/recombinase XerD D PAU_00940 gene0007; putative phage integrase/recombinase K04763 xerD; integrase/recombinase XerD D PAU_03005 gene0035; phage integrase K04763 xerD; integrase/recombinase XerD D PAU_00948 gene0012; putative integrase/recombinase K04763 xerD; integrase/recombinase XerD D PAU_00954 gene0017; putative integrase/recombinase K04763 xerD; integrase/recombinase XerD D PAU_00962 gene0025; Phage integrase K04763 xerD; integrase/recombinase XerD D PAU_02999 putative integrase K04763 xerD; integrase/recombinase XerD D PAU_02891 mrp; conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PAU_01257 fic; cell filamentation protein fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D PAU_03510 fdp1; conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D PAU_00301 conserved hypothetical protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pay03400] D PAU_03171 ogt; methylated-dna--protein-cysteine s-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PAU_01276 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PAU_03291 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PAU_02114 nth; endonuclease iii (dna-(apurinic or apyrimidinic site) lyase) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PAU_01123 mutT; mutator mutt protein (7,8-dihydro-8-oxoguanine-triphosphatase) (8-oxo dgtpase) (dgtp pyrophosphohydrolase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PAU_00735 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PAU_01677 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PAU_02363 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PAU_04375 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PAU_00226 tag; dna-3-methyladenine glycosylase i (3-methyladenine-dna glycosylase i constitutive) (tag i) (dna-3-methyladenine glycosidase i) K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D PAU_04363 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PAU_01983 xthA; exodeoxyribonuclease iii (exonuclease iii) (exo iii) (ap endonucleas vi) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PAU_01679 nfo; endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PAU_00401 nfi; endonuclease V (deoxyinosine 3'endoduclease) K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D PAU_01213 recJ; ssdna exonuclease, 5'--> 3' specific (ssdna exonuclease recj) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PAU_01408 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_00221 yicF; similar to putative dna ligase-like protein yicf of escherichia coli K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAU_00299 polA; dna polymerase I polA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAU_03908 uvrA; uvrabc system protein a (uvra protein) (excinuclease abc subunit a) K03701 uvrA; excinuclease ABC subunit A D PAU_02936 uvrB; uvrabc system protein b (protein uvrb) (excinuclease abc subunit b) K03702 uvrB; excinuclease ABC subunit B D PAU_02567 uvrC; uvrabc system protein c (protein uvrc) (excinuclease abc subunit c) K03703 uvrC; excinuclease ABC subunit C D PAU_04117 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PAU_00350 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PAU_00351 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PAU_04191 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PAU_00210 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PAU_01723 mfd; transcription-repair coupling factor (trcf) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PAU_00696 mutS; dna mismatch repair protein muts K03555 mutS; DNA mismatch repair protein MutS D PAU_04082 mutL; dna mismatch repair protein mutl K03572 mutL; DNA mismatch repair protein MutL D PAU_01092 mutH; dna mismatch repair protein muth (methyl-directed mismatch repai protein) K03573 mutH; DNA mismatch repair protein MutH D PAU_01691 sbcB; exodeoxyribonuclease i (exonuclease i) (dn deoxyribophosphodiesterase) K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D PAU_01825 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PAU_03437 Probable exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PAU_00659 dnaE; dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAU_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAU_03986 holC; dna polymerase iii, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAU_03158 holA; dna-directed dna polymerase iii delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAU_01710 holB; dna-directed dna polymerase iii delta' chain K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAU_00861 dnaQ; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAU_03388 DNA polymerase III subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAU_00488 holD; DNA polymerase III, Psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAU_01845 holE; dna polymerase iii, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAU_03907 ssb; single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein D PAU_00069 dam; DNA adenine methylase (deoxyadenosyl-methyltransferase (dna adenine methyltransferase) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_04395 n6 adenine-specific dna methyltransferase, d12 class K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_04304 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_00591 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D PAU_00589 recC; exodeoxyribonuclease v gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D PAU_00592 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D PAU_03212 Protein recA (Recombinase A) K03553 recA; recombination protein RecA D PAU_02470 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PAU_02469 ruvB; RuvB protein, holliday junction helicase subunit A K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PAU_02471 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PAU_04247 priA; primosomal protein n'(= factor y)(putative helicase) (primosoma protein n') K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PAU_04071 priB; primosomal replication protein n K02686 priB; primosomal replication protein N D PAU_03390 Primosomal replication protein N K04067 priC; primosomal replication protein N'' D PAU_03504 sbcC; nuclease sbccd subunit c K03546 sbcC; DNA repair protein SbcC/Rad50 D PAU_03503 sbcD; nuclease sbccd subunit d K03547 sbcD; DNA repair protein SbcD/Mre11 D PAU_00521 radA; dna repair protein rada K04485 radA; DNA repair protein RadA/Sms D PAU_00003 recF; dna replication and repair protein recf K03629 recF; DNA replication and repair protein RecF D PAU_00196 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PAU_01307 recO; dna repair protein reco (recombination protein o) K03584 recO; DNA repair protein RecO (recombination protein O) D PAU_03386 Recombination protein recR K06187 recR; recombination protein RecR D PAU_01273 recN; dna repair protein recn (recombination protein n) K03631 recN; DNA repair protein RecN (Recombination protein N) D PAU_03508 rdgC; recombination-associated protein rdgc K03554 rdgC; recombination associated protein RdgC D PAU_02722 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D PAU_01666 yejH; conserved hypothetical protein K19789 radD; DNA repair protein RadD D PAU_01558 gyrA; dna gyrase subunit a K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PAU_00004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PAU_02074 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PAU_00403 dbhA; dna-binding protein hu-alpha (ns2) (hu-2) K05787 hupA; DNA-binding protein HU-alpha D PAU_03414 DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta D PAU_03714 fis; dna-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PAU_01872 ihfA; integration host factor subunit alpha (ihf-alpha) K04764 ihfA; integration host factor subunit alpha D PAU_02827 ihfB; integration host factor beta-subunit (ihf-beta) K05788 ihfB; integration host factor subunit beta D PAU_04111 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PAU_03196 hns; dna-binding protein h-ns (histone-like protein hlp-ii) (protein h1 (protein b1) K03746 hns; DNA-binding protein H-NS D PAU_02028 hns; dna-binding protein h-ns (histone-like protein hlp-ii) K03746 hns; DNA-binding protein H-NS D PAU_03222 DNA polymerase IV (DNA-damage-inducible protein P) K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D PAU_03927 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D PAU_02702 dinI; dna-damage-inducible protein i K12149 dinI; DNA-damage-inducible protein I D PAU_04147 rep; Rep helicase, a single-stranded DNA dependent ATPase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D PAU_02740 helD; dna helicase iv K03658 helD; DNA helicase IV [EC:5.6.2.4] D PAU_02915 dinG; probable atp-dependent helicase (dna-damage-inducible protein g) K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PAU_02438 conserved hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PAU_03174 nrdE; ribonucleoside-diphosphate reductase alpha-chain (ribonucleotid reductase r1 subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAU_01556 nrdA; ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAU_03175 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAU_01555 nrdB; ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid reductase 1) (b2 protein) (r2 protein) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:pay03029] D PAU_04029 infB; translation initiation factor if-2 K02519 infB; translation initiation factor IF-2 D PAU_01867 infC; translation initiation factor if-3 K02520 infC; translation initiation factor IF-3 D PAU_00645 tsf; elongation factor ts (ef-ts) K02357 tsf; elongation factor Ts D PAU_00342 tufA; elongation factor tu-b (ef-tu-b) K02358 tuf; elongation factor Tu D PAU_04221 tufA; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu D PAU_00341 fusA; elongation factor g (ef-g) K02355 fusA; elongation factor G D PAU_01306 era; gtp-binding protein era K03595 era; GTPase D PAU_01938 tyrS; tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAU_00140 tyrS2; tyrosyl-trna synthetase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAU_03156 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAU_02474 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAU_02501 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAU_03907 ssb; single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein D PAU_00652 yaeT; outer membrane protein assembly factor yaet precursor K07277 SAM50; outer membrane protein insertion porin family D PAU_00543 dnaK; chaperone hsp70, autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK D PAU_03756 groL; 60 kda chaperonin (protein cpn60) (groel protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAU_03757 groS; 10 kda chaperonin (protein cpn10) (groes protein) K04078 groES; chaperonin GroES D PAU_00544 dnaJ; chaperone with dnak; heat shock protein K03686 dnaJ; molecular chaperone DnaJ D PAU_01362 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_00158 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_04154 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_01365 hscB; co-chaperone protein hscb (hsc20) K04082 hscB; molecular chaperone HscB D PAU_01930 grxD; glutaredoxin-4 (grx4) (monothiol glutaredoxin) K07390 grxD; monothiol glutaredoxin D PAU_02891 mrp; conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PAU_03431 cyoE; Protoheme IX farnesyltransferase (Heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141] D PAU_04398 oxaA; similar to 60 kda inner-membrane protein yidc of escherichia coli K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAU_03384 Chaperone protein htpG (Heat shock protein htpG) K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pay02000] D PAU_02300 ybtP; putative inner membrane abc-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D PAU_02301 ybtP; putative inner membrane abc-transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D PAU_02819 msbA; lipid a export atp-binding/permease protein msba K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D PAU_03407 Multidrug resistance-like ATP-binding protein mdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D PAU_03406 Multidrug resistance-like ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D PAU_03077 rtxB; RTX toxin ABC transporter protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB D PAU_03079 Putative toxin transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE D PAU_01345 mchF; probable microcin h47 secretion atp-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D PAU_00628 putative membrane protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D PAU_01800 similar to abc transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PAU_01799 lipid A export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PAU_02263 abc transporter, atp-binding protein, hlyb family K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PAU_00607 hasD; transport protein hasd K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D PAU_02848 cydC; transport atp-binding protein cydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D PAU_02847 cydD; transport atp-binding protein cydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D PAU_02854 macB; macrolide-specific abc-type efflux carrier protein macb K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D PAU_02752 uup; abc transporter atp-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein D PAU_01397 cysP; thiosulfate-binding protein cysp K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PAU_04263 sbp; sulfate-binding protein (sulfate starvation-induced protein 2) (ssi2) K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D PAU_01398 cysU; sulfate, thiosulfate transport system permease t protein (sulfat transport system permease t protein) K02046 cysU; sulfate/thiosulfate transport system permease protein D PAU_01399 cysW; sulfate transport system permease protein cysw K02047 cysW; sulfate/thiosulfate transport system permease protein D PAU_01400 cysA; sulfate/thiosulfate import ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PAU_02946 modA; molybdate-binding periplasmic protein K02020 modA; molybdate transport system substrate-binding protein D PAU_02945 modB; molybdenum transport system permease protein modb K02018 modB; molybdate transport system permease protein D PAU_02944 modC; molybdenum import ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PAU_02948 modF; atp-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein D PAU_00764 afuA; periplasmic ferric iron-binding protein (putative periplasmic-iron binding protein) K02012 afuA; iron(III) transport system substrate-binding protein D PAU_00763 afuB; putative permease component of transport system for ferric iro (putative ferric transport system permease) K02011 afuB; iron(III) transport system permease protein D PAU_00762 fbpC; ferric cations import ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PAU_00578 tbpA; thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein D PAU_00577 yabK; thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein D PAU_00576 thiQ; thiamine import ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PAU_03179 proX; glycine betaine-binding periplasmic protein prox K02002 proX; glycine betaine/proline transport system substrate-binding protein D PAU_03178 proW; glycine betaine/l-proline transport system permease protein prow K02001 proW; glycine betaine/proline transport system permease protein D PAU_03177 proV; glycine betaine/l-proline transport atp-binding protein prov K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D PAU_00367 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein D PAU_00368 malF; maltose transport system permease protein malf K10109 malF; maltose/maltodextrin transport system permease protein D PAU_00369 malG; maltose transport system permease protein K10110 malG; maltose/maltodextrin transport system permease protein D PAU_00366 malK; maltose/maltodextrin import ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAU_00054 rbsB; d-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D PAU_00053 rbsC; ribose transport system permease protein K10440 rbsC; ribose transport system permease protein D PAU_00052 rbsA; ribose transport atp-binding protein rbsa K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAU_03670 conserved hypothetical Protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PAU_03671 conserved hypothetical Protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PAU_03672 yrbF; hypothetical abc transporter atp-binding protein yrbf K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PAU_03669 conserved hypothetical Protein K07323 mlaC; phospholipid transport system substrate-binding protein D PAU_03668 conserved hypothetical Protein K07122 mlaB; phospholipid transport system transporter-binding protein D PAU_00162 pstS; phosphate-binding periplasmic protein psts K02040 pstS; phosphate transport system substrate-binding protein D PAU_00163 pstC; phosphate transport system permease protein pstc K02037 pstC; phosphate transport system permease protein D PAU_00164 pstA; phosphate transport system permease protein psta K02038 pstA; phosphate transport system permease protein D PAU_00165 pstB; phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PAU_02858 artI; arginine-binding periplasmic protein 1 K09997 artI; arginine transport system substrate-binding protein D PAU_02860 artM; arginine transport system permease protein artm K09998 artM; arginine transport system permease protein D PAU_02859 artQ; arginine transport system permease protein artq K09999 artQ; arginine transport system permease protein D PAU_02857 artP; arginine transport atp-binding protein artp K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D PAU_03152 gltI; glutamate/aspartate transport system permease protein glti K10001 gltI; glutamate/aspartate transport system substrate-binding protein D PAU_03154 gltK; glutamate/aspartate transport system permease protein gltk K10002 gltK; glutamate/aspartate transport system permease protein D PAU_03153 gltJ; glutamate/aspartate transport system permease protein gltj K10003 gltJ; glutamate/aspartate transport system permease protein D PAU_03155 gltL; glutamate/aspartate transport atp-binding protein gltl K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D PAU_03993 similar to amino acid abc transporter K02424 tcyA; L-cystine transport system substrate-binding protein D PAU_03990 yecS; similar to amino acid abc transporter K02424 tcyA; L-cystine transport system substrate-binding protein D PAU_03991 yecS; similar to extracellular solute-binding protein-amino acid abc transporter K10009 tcyB; L-cystine transport system permease protein D PAU_03992 yecC; hypothetical amino-acid abc transporter atp-binding protein yecc K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D PAU_03723 livK; leucine-specific binding protein livk K01999 livK; branched-chain amino acid transport system substrate-binding protein D PAU_03722 livH; high-affinity branched-chain amino acid transport system permeas protein livh (liv-i protein h) K01997 livH; branched-chain amino acid transport system permease protein D PAU_03721 livM; high-affinity branched-chain amino acid transport system permeas protein livm K01998 livM; branched-chain amino acid transport system permease protein D PAU_03720 livG; high-affinity branched-chain amino acid transport atp-binding protei livg K01995 livG; branched-chain amino acid transport system ATP-binding protein D PAU_03719 livF; high-affinity branched-chain amino acid transport atp-binding protein livf K01996 livF; branched-chain amino acid transport system ATP-binding protein D PAU_00667 metQ; d-methionine-binding periplasmic protein metq K02073 metQ; D-methionine transport system substrate-binding protein D PAU_00668 metI; d-methionine transport permease protein meti K02072 metI; D-methionine transport system permease protein D PAU_00669 metN; methionine import ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D PAU_00167 fliY; putative periplasmic binding transport protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAU_00168 similar to amino acid permease component of abc transporter K02029 ABC.PA.P; polar amino acid transport system permease protein D PAU_00169 similar to amino acid permease component of abc transporter K02029 ABC.PA.P; polar amino acid transport system permease protein D PAU_02033 oppA2; oligopeptide transport periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_01958 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02342 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02032 oppA1; oligopeptide transport periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02337 dppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D PAU_02034 oppB; oligopeptide transport system permease protein oppb K15581 oppB; oligopeptide transport system permease protein D PAU_02035 oppC; oligopeptide transport system permease protein oppc K15582 oppC; oligopeptide transport system permease protein D PAU_02036 oppD; oligopeptide transport atp-binding protein oppd K15583 oppD; oligopeptide transport system ATP-binding protein D PAU_02037 oppF; oligopeptide transport atp-binding protein oppf K10823 oppF; oligopeptide transport system ATP-binding protein D PAU_00231 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein D PAU_00232 dppB; dipeptide transport system permease protein dppb K12369 dppB; dipeptide transport system permease protein D PAU_00233 dppC; dipeptide transport system permease protein dppc K12370 dppC; dipeptide transport system permease protein D PAU_00234 dppD; dipeptide transport atp-binding protein dppd K12371 dppD; dipeptide transport system ATP-binding protein D PAU_00235 dppF; putative atp-binding component of dipeptide transport system K12372 dppF; dipeptide transport system ATP-binding protein D PAU_01947 sapA; peptide transport periplasmic protein sapa K19226 sapA; cationic peptide transport system substrate-binding protein D PAU_01946 sapB; peptide transport system permease protein sapb K19227 sapB; cationic peptide transport system permease protein D PAU_01945 sapC; peptide transport system permease protein sapc K19228 sapC; cationic peptide transport system permease protein D PAU_01944 sapD; peptide transport system atp-binding protein sapd K19229 sapD; cationic peptide transport system ATP-binding protein D PAU_01943 sapF; peptide transport system atp-binding protein sapf K19230 sapF; cationic peptide transport system ATP-binding protein D PAU_03942 fecB; iron(iii) dicitrate-binding periplasmic protein fecb K23181 fecB; ferric citrate transport system substrate-binding protein D PAU_03944 fecD; iron(iii) dicitrate transport system permease protein fecd K23182 fecD; ferric citrate transport system permease protein D PAU_03943 fecC; iron(iii) dicitrate transport system permease protein fecc K23183 fecC; ferric citrate transport system permease protein D PAU_03945 fecE; iron(iii) dicitrate transport atp-binding protein fece K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D PAU_01897 chuT; putative periplasmic binding protein (putative hemin binding protein) K25132 hmuT; heme transport system substrate-binding protein D PAU_01896 putative hemin permease K25133 hmuU; heme transport system permease protein D PAU_01895 hmuV; hemin import atp-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D PAU_00886 phuB; ferrienterobactin-binding periplasmic protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D PAU_00887 phuG; cytoplasmic membrane permease (ferric vibriobactin abc transporter permease protein) K23186 fepD; iron-siderophore transport system permease protein D PAU_00888 phuD; ferric enterobactin transport protein fepg K23187 fepG; iron-siderophore transport system permease protein D PAU_00891 phuC; ferric vibriobactin abc transporter, atp-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D PAU_03286 Iron compound ABC transporter K25282 yclQ; iron-siderophore transport system substrate-binding protein D PAU_01082 abc-type iron(iii) transport system, periplasmic binding protein precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PAU_01683 similarities with iron(iii) abc transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PAU_01684 similar to hemin/siderophore abc transporter K02015 ABC.FEV.P; iron complex transport system permease protein D PAU_01685 fepC; similar to hemin/siderophore transport atp-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PAU_00826 btuF; vitamin b12-binding protein precursor K06858 btuF; vitamin B12 transport system substrate-binding protein D PAU_01873 btuC; vitamin b12 import system permease protein btuc K06073 btuC; vitamin B12 transport system permease protein D PAU_01874 btuD; vitamin B12 import ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D PAU_02466 znuA; putative zinc uptake system component K09815 znuA; zinc transport system substrate-binding protein D PAU_02468 znuB; high-affinity zinc uptake system membrane protein znub K09816 znuB; zinc transport system permease protein D PAU_02467 znuC; putative zinc import ATP-binding component of ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PAU_01864 iron (chelated) abc transporter, periplasmic-binding protein yfea K11604 sitA; manganese/iron transport system substrate-binding protein D PAU_01862 yfeC; chelated iron transport system membrane protein yfec K11605 sitC; manganese/iron transport system permease protein D PAU_01861 yfeD; chelated iron transport system membrane protein yfed homolog K11606 sitD; manganese/iron transport system permease protein D PAU_01863 iron transport system atp-binding protein yfeb K11607 sitB; manganese/iron transport system ATP-binding protein D PAU_03394 Biotin synthase K03523 bioY; biotin transport system substrate-specific component D PAU_03395 ABC transporter for cobalt K16783 bioN; biotin transport system permease protein D PAU_03396 Cobalt import ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D PAU_03984 yjgP; inner membrane protein yjgp K07091 lptF; lipopolysaccharide export system permease protein D PAU_03983 yjgQ; similar to putative membrane protein yjgq of escherichia coli K11720 lptG; lipopolysaccharide export system permease protein D PAU_03678 yhbG; probable abc transporter atp-binding protein yhbg K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D PAU_02927 ybhR; inner membrane transport permease ybhr K25180 ybhR; drug efflux transport system permease protein D PAU_02926 ybhS; abc transporter permease protein ybhs K25181 ybhS; drug efflux transport system permease protein D PAU_02925 ybhF; abc transporter atp-binding protein ybhf K25182 ybhF; drug efflux transport system ATP-binding protein D PAU_02924 ybhG; upf0194 membrane protein ybhg precursor K25183 ybhG; membrane fusion protein YbhG D PAU_01726 lolC; lipoprotein releasing system transmembrane protein lolc K09808 lolC_E; lipoprotein-releasing system permease protein D PAU_01728 lolE; lipoprotein releasing system transmembrane protein lole K09808 lolC_E; lipoprotein-releasing system permease protein D PAU_01727 lolD; lipoprotein-releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D PAU_03727 ftsX; cell division protein ftsx K09811 ftsX; cell division transport system permease protein D PAU_03728 ftsE; cell division atp-binding protein ftse K09812 ftsE; cell division transport system ATP-binding protein D PAU_02787 conserved membrane protein, multidrug efflux associated K25154 evrC; viologen exporter family transport system permease protein D PAU_02348 conserved hypothetical protein K25154 evrC; viologen exporter family transport system permease protein D PAU_02788 abc transporter integral membrane protein K25155 evrB; viologen exporter family transport system permease protein D PAU_02349 similar to abc transporter integral membrane protein K25155 evrB; viologen exporter family transport system permease protein D PAU_02789 abc transporter atp-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein D PAU_02350 similar to n-terminal region of atp-binding component of ab transporter K25156 evrA; viologen exporter family transport system ATP-binding protein D PAU_00803 yadH; abc transporter, integral membrane protein yadh K01992 ABC-2.P; ABC-2 type transport system permease protein D PAU_04018 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PAU_04017 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PAU_00802 yadG; hypothetical abc transporter atp-binding protein yadg K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PAU_00834 conserved hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PAU_02459 membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D PAU_01888 similar to permease of abc transporter K02004 ABC.CD.P; putative ABC transport system permease protein D PAU_00980 ybbP; probable abc transporter permease protein ybbp K02004 ABC.CD.P; putative ABC transport system permease protein D PAU_01804 putative ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein D PAU_02199 macB; macrolide export ATP-binding/permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D PAU_00981 ybbA; probable abc transporter atp-binding protein ybba K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PAU_01887 similar to atp-binding component of abc transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PAU_02462 putative abc transporter atp-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PAU_01805 putative abc transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PAU_00523 similar to abc transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PAU_02200 similar to atp-binding component of abc transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PAU_01909 ynhD; putative atp-binding component of a transport system K09013 sufC; Fe-S cluster assembly ATP-binding protein D PAU_02123 yfeH; putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PAU_00845 conserved hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D PAU_01921 mdtK; multidrug resistance protein mdtk (multidrug-efflux transporter) K26939 norM; MATE family, multidrug efflux pump D PAU_02133 yeeO; Multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump D PAU_00749 yeeO; conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D PAU_01243 norM; probable multidrug resistance protein norm (multidrug-efflu transporter) K26937 dinF; MATE family, multidrug efflux pump D PAU_00703 fucP; l-fucose-proton symporter (l-fucose permease) (6-deoxy-l-galactos permease) K02429 fucP; MFS transporter, FHS family, L-fucose permease D PAU_00924 hpaX; hypothetical 4-hydroxyphenylacetate permease (hpax) K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease D PAU_01355 hcaT; mfs (major facilitator superfamily) transporter (probable 3 phenylpropionic acid transporter) K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D PAU_03741 glpT; glycerol-3-phosphate transporter (g-3-p transporter) (g-3-p permease) K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D PAU_00765 uhpC; putative permease; hexosephosphate transport (putative regulator protein) K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D PAU_03214 Similar to unknown protein YgeD of Escherichia K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D PAU_03425 AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D PAU_02677 similar to tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D PAU_00380 cmlA1; putative membrane protein similar to multidrug resistance proteins K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D PAU_00928 bcr; bicyclomycin resistance protein; transmembrane protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D PAU_01669 bcr; bicyclonycin resistance protein (sulfonamide resistance protein) K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D PAU_04258 emrD; mfs family, multidrug tranport protein K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D PAU_02504 mdtH; multidrug resistance protein mdth K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D PAU_00852 putative membrane protein major facilitator superfamily mfs_1 K23448 sfaA; MFS transporter, DHA1 family, staphyloferrin A biosynthesis exporter D PAU_04160 multidrug resistance protein b K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D PAU_03185 emrB; multidrug resistance protein b K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D PAU_01186 putative transmembrane-transport protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D PAU_04381 macrolide-efflux protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D PAU_00978 fsr; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D PAU_02180 putative transport protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D PAU_02299 ybtX; putative cytoplasmic transmembrane protein K05373 ybtX; MFS transporter, putative signal transducer D PAU_01403 ptsI; phosphoenolpyruvate-protein phosphotransferase (phosphotransferas system, enzyme i) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D PAU_00580 ptsP; phosphoenolpyruvate-protein phosphotransferase pts (phosphotransferase system, enzyme i) (enzyme i-ntr) K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D PAU_01404 ptsH; phosphocarrier protein hpr (histidine-containing protein) K02784 ptsH; phosphocarrier protein HPr D PAU_03683 ptsO; phosphocarrier protein npr (nitrogen related hpr) K08485 ptsO; phosphocarrier protein NPr D PAU_01402 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAU_03088 nagE; pts system, n-acetylglucosamine-specific iiabc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PAU_01260 scrA; PTS system, sucrose-specific IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PAU_00547 bglF; beta-glucoside-specific phosphotransferase system-dependent permease K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D PAU_00549 bglP; similar to beta-glucoside permease iiabc component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D PAU_01357 treB; pts system, trehalose-specific iibc component (eiibc-tre) (trehalose permease iibc component) (phosphotransferase enzyme ii, bc component (eii-tre) K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D PAU_00314 putative PTS system EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D PAU_01786 celC; pts system, cellobiose-specific iia component (eiia-cel) (cellobiose permease iia component) (phosphotransferase enzyme ii, a component (eiii-cel) K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAU_01788 celA; pts system, cellobiose-specific iib component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAU_01787 celB; phosphotransferase system cellobiose-specific component iic K02761 celB; cellobiose PTS system EIIC component D PAU_01837 manX; pts system, mannose-specific iiab component (eiiab-man) (mannose permease iiab component) (phosphotransferase enzyme ii, ab component (eiii-man) K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D PAU_01836 manY; pts system, mannose-specific iic component (eiic-man) (mannose permease iic component) (phosphotransferase enzyme ii, c component (eii-p-man) K02795 manY; mannose PTS system EIIC component D PAU_01835 manZ; pts system, mannose-specific iid component (eiid-man) (mannose permease iid component) (phosphotransferase enzyme ii, d component (eii-m-man) K02796 manZ; mannose PTS system EIID component D PAU_00778 yadI; similar to putative pts system iia component yadi of escherichia coli K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D PAU_00775 agaV; pts system, n-acetylgalactosamine-specific iib component 2 (eiib-aga' (n-acetylgalactosamine-permease iib component 2) (phosphotransferas enzyme ii, b component 2) K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D PAU_00776 agaC; pts system, n-acetylgalactosamine-specific iic component 1 (eiic-aga (n-acetylgalactosamine-permease iic component 1) K02746 agaW; N-acetylgalactosamine PTS system EIIC component D PAU_00777 agaD; pts system, n-acetylgalactosamine-specific iid component (eiid-aga (n-acetylgalactosamine-permease iid component) (phosphotransferas enzyme ii, d component) K02747 agaE; N-acetylgalactosamine PTS system EIID component D PAU_02591 sgcA; putative phosphotransferase enzyme ii, a component sgca K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAU_02590 sgaB; conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAU_02589 conserved hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component D PAU_03681 ptsN; nitrogen regulatory iia protein (enzyme iia-ntr) (phosphotransferas enzyme ii, a component) K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D PAU_02561 aqpZ; aquaporin z K06188 aqpZ; aquaporin Z D PAU_04256 glpF; glycerol uptake facilitator protein (aquaglyceroporin) K02440 glpF; glycerol uptake facilitator D PAU_03404 Ammonia channel precursor (Ammonia transporter) K03320 amt; ammonium transporter, Amt family D PAU_01940 gst; glutathione s-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAU_02871 yliJ; similar to glutathione s-transferase ylij of escherichia coli K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAU_03651 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D PAU_02836 focA; formate transporter 1 foca (formate channel 1) K06212 focA; formate transporter D PAU_04091 yjeP; putative periplasmic binding protein K22051 mscM; miniconductance mechanosensitive channel D PAU_01144 yggB; conserved hypothetical protein K03442 mscS; small conductance mechanosensitive channel D PAU_01085 similar to magnesium transport protein mgte K06213 mgtE; magnesium transporter D PAU_02689 motA; chemotaxis mota protein K02556 motA; chemotaxis protein MotA D PAU_02688 motB1; chemotaxis motb protein K02557 motB; chemotaxis protein MotB D PAU_03515 exbB; biopolymer transport exbb protein K03561 exbB; biopolymer transport protein ExbB D PAU_03514 exbD; biopolymer transport exbd protein K03559 exbD; biopolymer transport protein ExbD D PAU_02962 tolQ; tolq protein K03562 tolQ; biopolymer transport protein TolQ D PAU_02961 tolR; tolr protein K03560 tolR; biopolymer transport protein TolR D PAU_04116 corA; magnesium transport protein cora K03284 corA; magnesium transporter D PAU_01963 zntB; zinc transport protein zntb K16074 zntB; zinc transporter D PAU_03169 crcB; inner membrane protein crcb homolog K06199 crcB; fluoride exporter D PAU_04057 ytfL; upf0053 inner membrane protein ytfl K03699 tlyC; magnesium and cobalt exporter, CNNM family D PAU_03207 yfjD; similar to putative membrane protein yfjd of escherichia coli K03699 tlyC; magnesium and cobalt exporter, CNNM family D PAU_02765 ompN2; outer membrane protein n (porin ompn) K09476 ompF; outer membrane pore protein F D PAU_02764 ompN1; outer membrane protein ompN K09476 ompF; outer membrane pore protein F D PAU_00365 lamB; maltoporin precursor (maltose-inducible porin) (lambda recepto protein) K02024 lamB; maltoporin D PAU_02744 ompA; outer membrane protein a (outer membrane protein ii*) K03286 TC.OOP; OmpA-OmpF porin, OOP family D PAU_02047 ompX; outer membrane protein x precursor K16078 ail; attachment invasion locus protein D PAU_01414 fadL; outer membrane protein K06076 fadL; long-chain fatty acid transport protein D PAU_02408 yraJ; putative outer membrane protein K07347 fimD; outer membrane usher protein D PAU_03859 putative usher protein (putative outer membrane usher protein) K07347 fimD; outer membrane usher protein D PAU_00205 lpfC; similar to outer membrane usher protein K07347 fimD; outer membrane usher protein D PAU_00972 yraJ; putative outer membrane protein K07347 fimD; outer membrane usher protein D PAU_01249 lip-1; lipase 1 precursor K12686 apeE; outer membrane lipase/esterase D PAU_03941 fecA; iron(iii) dicitrate outer membrane transporter protein feca K16091 fecA; Fe(3+) dicitrate transport protein D PAU_04227 btuB; vitamin b12 transporter btub precursor (cobalamin receptor) (oute membrane cobalamin translocator) K16092 btuB; vitamin B12 transporter D PAU_02298 similar to the pesticin receptor fuya K15721 fyuA; pesticin/yersiniabactin receptor D PAU_01687 putative iron-regulated outer membrane protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D PAU_01246 similarities with heme receptor hasr/tonb-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D PAU_01824 cjrC; similar to outer membrane siderophore receptor cjrc of escherichi coli o164 K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D PAU_01899 outer membrane heme/hemoglobin receptor (heme utilization/transpor protein) K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D PAU_03223 Hemin receptor protein HemR K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D PAU_01241 oprC; similar to outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAU_00889 phuA; putative photobactin outer membrane receptor phua K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAU_00609 putative outer membrane protein K12538 hasF; outer membrane protein, type I secretion system D PAU_03531 tolC; outer membrane protein tolc K12340 tolC; outer membrane protein D PAU_01889 probable outer membrane protein K12340 tolC; outer membrane protein D PAU_02198 putative outer membrane efflux protein K12340 tolC; outer membrane protein D PAU_01073 wza; similar to putative polysaccharide export protein yccz K01991 wza; polysaccharide biosynthesis/export protein D PAU_00545 conserved hypothetical protein K07267 oprB; porin D PAU_00652 yaeT; outer membrane protein assembly factor yaet precursor K07277 SAM50; outer membrane protein insertion porin family D PAU_01389 conserved hypothetical protein K17713 bamB; outer membrane protein assembly factor BamB D PAU_01797 nlpB; lipoprotein-34 K07287 bamC; outer membrane protein assembly factor BamC D PAU_03193 yfiO; conserved hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD D PAU_01272 smpA; membrane protein-small protein a K06186 bamE; outer membrane protein assembly factor BamE D PAU_04055 ytfM; conserved hypothetical protein K07278 tamA; translocation and assembly module TamA D PAU_04054 ytfN; conserved hypothetical protein K09800 tamB; translocation and assembly module TamB D PAU_01641 putative adhesin K19232 btaE; hyaluronate-binding autotransporter adhesin D PAU_03677 yhbN; protein yhbn precursor probable transporter K09774 lptA; lipopolysaccharide export system protein LptA D PAU_03676 Hypothetical Protein K11719 lptC; lipopolysaccharide export system protein LptC D PAU_00570 imp; organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein D PAU_03157 rlpB; rare lipoprotein b precursor K03643 lptE; LPS-assembly lipoprotein D PAU_01062 conserved hypothetical protein K23475 yopB; transloator D PAU_01063 conserved hypothetical protein K23476 yopD; transloator D PAU_03148 corC; magnesium and cobalt efflux protein corc K06189 corC; hemolysin (HlyC) family protein D PAU_02893 yohJ; upf0299 membrane protein plu1549 K06518 cidA; holin-like protein D PAU_01682 lysP; lysine-specific permease K11733 lysP; lysine-specific permease D PAU_01753 aroP; aromatic amino acid transport protein arop (general aromatic amin acid permease) K11734 aroP; aromatic amino acid transport protein AroP D PAU_02603 cycA; d-serine/d-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D PAU_00674 proY; proline-specific permease proy K16234 hutT; histidine transporter D PAU_01425 amino acid permease K16234 hutT; histidine transporter D PAU_02403 similar to putative arginine/ornithine antiporter ydgi of escherichi coli K03758 arcD; arginine:ornithine antiporter / lysine permease D PAU_03399 Acridine efflux pump K18138 acrB; multidrug efflux pump D PAU_01767 mdtB; multidrug resistance protein mdtb (multidrug transporter mdtb) K07788 mdtB; multidrug efflux pump D PAU_01766 mdtC; multidrug resistance protein mdtc (multidrug transporter mdtc) K07789 mdtC; multidrug efflux pump D PAU_01965 methylviologen resistance protein encoded within prophage cp-933 (integral membrane drug resistance protein emre) K03297 emrE; small multidrug resistance pump D PAU_03752 sugE; quaternary ammonium compound-resistance protein suge K11741 sugE; quaternary ammonium compound-resistance protein SugE D PAU_02441 mdtI; multidrug resistance protein mdti K11742 mdtI; spermidine export protein MdtI D PAU_02442 mdtJ; multidrug resistance protein mdtj K11743 mdtJ; spermidine export protein MdtJ D PAU_02912 ybiF; inner membrane transport protein ybif K11939 rhtA; inner membrane transporter RhtA D PAU_04113 rarD; rard protein K05786 rarD; chloramphenicol-sensitive protein RarD D PAU_02365 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D PAU_02366 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D PAU_01880 conserved hypothetical protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D PAU_02599 dsdX; dsdx permease K13629 dsdX; D-serine transporter D PAU_03866 gntU; low-affinity gluconate transporter (gluconate permease) (gnt-system) K06156 gntU; Gnt-I system low-affinity gluconate transporter D PAU_02013 putative Gluconate transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D PAU_03762 dcuA; anaerobic c4-dicarboxylate transporter dcua K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D PAU_03673 yrbG; similar to putative cation antiporter K07301 yrbG; cation:H+ antiporter D PAU_00099 pitA; low-affinity inorganic phosphate transporter 1 K16322 pit; low-affinity inorganic phosphate transporter D PAU_03711 panF; sodium/pantothenate symporter (pantothenate permease) K14392 panF; sodium/pantothenate symporter D PAU_02605 putP; sodium/proline symporter (proline permease) K11928 putP; sodium/proline symporter D PAU_00060 actP; cation/acetate symporter actp (acetate transporter actp) (acetat permease) K14393 actP; cation/acetate symporter D PAU_03012 dctA; c4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D PAU_03626 ygjU; inner membrane symporter ygju K07862 sstT; serine/threonine transporter D PAU_00191 gltS; sodium/glutamate symport carrier protein (glutamate permease) K03312 gltS; glutamate:Na+ symporter, ESS family D PAU_00551 nhaA; na(+)/h(+) antiporter 1 (sodium/proton antiporter 1) K03313 nhaA; Na+:H+ antiporter, NhaA family D PAU_01968 nhaB; na(+)/h(+) antiporter nhab (sodium/proton antiporter nhab) K03314 nhaB; Na+:H+ antiporter, NhaB family D PAU_03030 conserved hypothetical protein K03315 nhaC; Na+:H+ antiporter, NhaC family D PAU_03893 putative sodium/hydrogen exchanger family protein yjce K24163 nhaK; monovalent cation/hydrogen antiporter D PAU_00328 kefB; glutathione-regulated potassium-efflux system protein kefb (k(+)/h(+ antiporter) (nem-activable k(+)/h(+) antiporter) K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D PAU_00327 kefG; glutathione-regulated potassium-efflux system ancillary protein kefg K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D PAU_00977 ybaL; similar to putative transport protein ybal of escherichia coli K26735 KEA4_5_6; K+:H+ antiporter D PAU_03870 trkH; trk system potassium uptake protein trkh K03498 trkH; trk/ktr system potassium uptake protein D PAU_04180 trkA; trk system potassium uptake protein trka (k(+)-uptake protein trka) K03499 trkA; trk/ktr system potassium uptake protein D PAU_01782 uraA; uracil permease (uracil transporter) K02824 uraA; uracil permease D PAU_00190 yicE; similar to xanthine/uracil permease family protein yice of escherichi coli K16345 xanP; xanthine permease XanP D PAU_03894 putative transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease D PAU_01409 nupC; nucleoside permease nupc K11535 nupC; nucleoside transport protein D PAU_02330 similar to tyrosine-specific transport system tyrp of escherichi coli K03834 tyrP; tyrosine-specific transport protein D PAU_01547 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein D PAU_01676 mtr; tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein D PAU_02866 sdaC; serine transporter sdac protein K03837 sdaC; serine transporter D PAU_00741 yhaO; putative haaap family transport protein K26604 cyuP; cysteine uptake transport protein D PAU_02382 putative nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D PAU_02521 ychM; putative sulfate transporter ychm K03321 TC.SULP; sulfate permease, SulP family D PAU_02194 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PAU_04134 wzxE; lipopolysaccharide biosynthesis protein K16693 wzxE; enterobacterial common antigen flippase D PAU_02502 mviN; virulence factor mvin homolog K03980 murJ; putative peptidoglycan lipid II flippase D PAU_00575 rsib_orf.195; conserved hypothetical protein K13936 mdcF; malonate transporter and related proteins D PAU_01148 argO; arginine exporter protein argo K06895 lysE; L-lysine exporter family protein LysE/ArgO D PAU_02169 argO; Lysine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D PAU_00563 similar to unknown protein. putative transmembrane protein K05835 rhtC; threonine efflux protein D PAU_03181 conserved hypothetical protein K26605 azlC; branched chain amino acid efflux pump D PAU_03182 conserved hypothetical protein K26606 azlD; branched chain amino acid efflux pump D PAU_01440 tctA; putative membrane protein K07793 tctA; putative tricarboxylic transport membrane protein D PAU_01441 tctB; conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D PAU_01442 tctC; conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D PAU_01792 perM; putative permease perm K03548 perM; putative permease D PAU_03737 conserved hypothetical Protein K09125 yhhQ; queuosine precursor transporter D PAU_01112 ftsW; membrane protein ftsw, involved in peptidoglycan biosynthesis K03588 ftsW; cell division protein FtsW D PAU_01833 yebN; upf0059 inner membrane protein plu2701 K23242 mntP; manganese efflux pump family protein D PAU_02041 tonB; iron ion transmembrane transporter-tonb protein K03832 tonB; periplasmic protein TonB D PAU_01247 tonB; similarities with energy transducer tonb. putative secreted protein K03832 tonB; periplasmic protein TonB D PAU_01822 conserved hypothetical protein K03832 tonB; periplasmic protein TonB D PAU_02958 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D PAU_02960 tolA; tola protein K03646 tolA; colicin import membrane protein D PAU_02959 tolB; periplasmic protein involved in the tonb-independent uptake of group colicins K03641 tolB; TolB protein D PAU_00744 fdnG; fdnG, alpha subunit of formate dehydrogenase-N K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D PAU_04159 multidrug resistance secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D PAU_03184 emrA; multidrug resistance secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D PAU_00608 alkaline protease secretion protein apre K12537 hasE; membrane fusion protein, type I secretion system D PAU_03078 rtxD; RTX toxin ABC transporter protein K12532 rtxD; membrane fusion protein, RTX toxin transport system D PAU_01343 mclA; microcin h47 secretion protein K13408 cvaA; membrane fusion protein D PAU_02325 mtfA; conserved hypothetical protein K13408 cvaA; membrane fusion protein D PAU_03398 Acriflavin resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D PAU_01768 mdtA; multidrug resistance protein mdta precursor (multidrug transporte mdta) K07799 mdtA; membrane fusion protein, multidrug efflux system D PAU_02855 macA; macrolide-specific efflux protein maca K13888 macA; membrane fusion protein, macrolide-specific efflux system D PAU_01075 wzc; tyrosine-protein kinase wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D PAU_02952 pnuC; pnuc nmn transporter K03811 pnuC; nicotinamide mononucleotide transporter D PAU_00152 feoA; ferrous iron transport protein a K04758 feoA; ferrous iron transport protein A D PAU_00151 feoB; ferrous iron transport protein b K04759 feoB; ferrous iron transport protein B D PAU_00150 yhgG; similar to putative DNA-binding transcriptional regulator protein yhgg of escherichia coli K07490 feoC; ferrous iron transport protein C D PAU_00100 uspB; conserved hypothetical protein K06144 uspB; universal stress protein B D PAU_02694 similar to mg(2+) transport atpase protein c K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D PAU_01849 putative copper transporter K07245 pcoD; copper resistance protein D D PAU_01848 conserved hypothetical protein K07156 copC; copper resistance protein C D PAU_01972 yeaF; putative uncharacterized protein yeaf (putative scaffolding protein i the formation of a murein-synthesizing holoenzyme) K07274 mipA; MipA family protein C 02044 Secretion system [BR:pay02044] D PAU_03531 tolC; outer membrane protein tolc K12340 tolC; outer membrane protein D PAU_01889 probable outer membrane protein K12340 tolC; outer membrane protein D PAU_02198 putative outer membrane efflux protein K12340 tolC; outer membrane protein D PAU_03077 rtxB; RTX toxin ABC transporter protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB D PAU_03079 Putative toxin transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE D PAU_03078 rtxD; RTX toxin ABC transporter protein K12532 rtxD; membrane fusion protein, RTX toxin transport system D PAU_00607 hasD; transport protein hasd K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D PAU_00608 alkaline protease secretion protein apre K12537 hasE; membrane fusion protein, type I secretion system D PAU_00609 putative outer membrane protein K12538 hasF; outer membrane protein, type I secretion system D PAU_01343 mclA; microcin h47 secretion protein K13408 cvaA; membrane fusion protein D PAU_02325 mtfA; conserved hypothetical protein K13408 cvaA; membrane fusion protein D PAU_01345 mchF; probable microcin h47 secretion atp-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D PAU_03274 Pilin biogenesis protein PilD K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAU_02785 pppA; type 4 prepilin-like proteins leader peptide processing enzyme (pecti enzymes secretion protein outo) K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAU_01384 pilF; putative fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF D PAU_03279 conserved hypothetical protein K02669 pilT; twitching motility protein PilT D PAU_00585 ppdA; prepilin peptidase dependent protein a K02679 ppdA; prepilin peptidase dependent protein A D PAU_00586 ppdB; prepilin peptidase dependent protein b K02680 ppdB; prepilin peptidase dependent protein B D PAU_00588 ppdC; prepilin peptidase dependent protein c K02681 ppdC; prepilin peptidase dependent protein C D PAU_01129 ppdD; prepilin peptidase dependent protein d K02682 ppdD; prepilin peptidase dependent protein D D PAU_01128 hofB; putative integral membrane protein involved in biogenesis of fimbriae protein transport, dna uptake (putative integral membrane protei hofb) K02504 hofB; protein transport protein HofB D PAU_01127 hofC; protein transport protein hofc K02505 hofC; protein transport protein HofC D PAU_00076 yrfD; conserved hypothetical protein K12288 hofM; pilus assembly protein HofM D PAU_00075 yrfC; conserved hypothetical protein K12289 hofN; pilus assembly protein HofN D PAU_00074 similar to putative membrane protein K12290 hofO; pilus assembly protein HofO D PAU_00073 hofQ; conserved hypothetical protein K02507 hofQ; protein transport protein HofQ D PAU_03282 Similar to putative resistance protein YggT K02221 yggT; YggT family protein D PAU_03412 conserved hypothetical protein K02237 comEA; competence protein ComEA D PAU_02820 ycaI; hypothetical membrane protein ycai K02238 comEC; competence protein ComEC D PAU_01037 sctC; type iii secretion outer membrane protein pscc K03219 yscC; type III secretion protein C D PAU_01036 sctD; type iii secretion component protein sctd K03220 yscD; type III secretion protein D D PAU_01035 sctF; type iii secretion component protein sctf K03221 yscF; type III secretion protein F D PAU_01032 sctI; type iii secretion component protein scti K04053 yscI; type III secretion protein I D PAU_01031 sctJ; type iii secretion component protein sctj K03222 yscJ; type III secretion protein J D PAU_01030 sctK; type iii secretion component protein sctk K04054 yscK; type III secretion protein K D PAU_01029 sctL; type iii secretion component protein sctl K03223 yscL; type III secretion protein L D PAU_01052 sctN; type iii secretion component protein sctn K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D PAU_03469 Putative Type III secretion ATP synthase hrcN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D PAU_01051 sctO; type iii secretion component protein scto K04056 yscO; type III secretion protein O D PAU_01050 sctP; type iii secretion component protein sctp K04057 yscP; type III secretion protein P D PAU_01049 sctQ; type iii secretion component protein sctq K03225 yscQ; type III secretion protein Q D PAU_01048 sctR; type iii secretion component protein sctr K03226 yscR; type III secretion protein R D PAU_01047 sctS; type iii secretion component protein scts K03227 yscS; type III secretion protein S D PAU_01046 sctT; type iii secretion component protein sctt K03228 yscT; type III secretion protein T D PAU_01045 sctU; type iii secretion component protein sctu K03229 yscU; type III secretion protein U D PAU_01057 lssD; type iii secretory apparatus protein pcrd K03230 yscV; type III secretion protein V D PAU_03450 Putative type III secretion system EscV protein K03230 yscV; type III secretion protein V D PAU_01053 sctW; type iii secretion control protein sctw K04058 yscW; type III secretion protein W D PAU_01055 sctX; type iii secretion protein sctx K04059 yscX; type III secretion protein X D PAU_03473 Putative Type III secretion flagellar biosynthesis inner membrane protein K22507 spaP; type III secretion system export apparatus protein D PAU_01038 sctB; type iii secretion component protein sctb K04049 yscB; type III secretion protein B D PAU_01034 sctG; type iii secretion component protein sctg K04051 yscG; type III secretion protein G D PAU_01033 sctH; type iii secretion component protein scth K04052 yscH; type III secretion protein H D PAU_01056 sctY; type iii secretion protein scty K04060 yscY; type III secretion protein Y D PAU_02665 flhA; flagellar biosynthesis protein flha K02400 flhA; flagellar biosynthesis protein FlhA D PAU_02666 flhB; flagellar biosynthetic protein flhb K02401 flhB; flagellar biosynthesis protein FlhB D PAU_02615 fliF; flagellar basal-body m-ring protein K02409 fliF; flagellar M-ring protein FliF D PAU_02617 fliH; flagellar assembly protein flih K02411 fliH; flagellar assembly protein FliH D PAU_02618 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PAU_02623 fliN; flagellar motor switch protein flin K02417 fliN; flagellar motor switch protein FliN D PAU_02624 fliO; flagellar protein flio K02418 fliO; flagellar protein FliO/FliZ D PAU_02625 fliP; flagellar biosynthetic protein flip precursor K02419 fliP; flagellar biosynthesis protein FliP D PAU_02626 fliQ; flagellar biosynthetic protein fliq K02420 fliQ; flagellar biosynthesis protein FliQ D PAU_02627 fliR; flagellar biosynthetic protein flir K02421 fliR; flagellar biosynthesis protein FliR D PAU_01212 dsbC; thiol:disulfide interchange protein dsbc precursor K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D PAU_01249 lip-1; lipase 1 precursor K12686 apeE; outer membrane lipase/esterase D PAU_00246 phlB; phla hemolysin secretion/activation protein phlb K11017 shlB; hemolysin activation/secretion protein D PAU_00245 hylA; hemolysin phla protein K11016 shlA; hemolysin D PAU_02269 putative membrane protein K11891 impL; type VI secretion system protein ImpL D PAU_02312 similar to putative membrane protein of y. pestis K11891 impL; type VI secretion system protein ImpL D PAU_03041 similar to putative membrane protein of y. pestis K11891 impL; type VI secretion system protein ImpL D PAU_00275 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL D PAU_03788 Putative membrane Protein K11891 impL; type VI secretion system protein ImpL D PAU_03820 Putative membrane Protein K11891 impL; type VI secretion system protein ImpL D PAU_03058 membrane protein K11892 impK; type VI secretion system protein ImpK D PAU_00280 Putative membrane Protein K11892 impK; type VI secretion system protein ImpK D PAU_03787 outer membrane protein, ompa/motb family K11892 impK; type VI secretion system protein ImpK D PAU_03835 putative membrane protein K11892 impK; type VI secretion system protein ImpK D PAU_02270 putative transmembrane protein K11892 impK; type VI secretion system protein ImpK D PAU_02271 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D PAU_03786 conserved hypothetical Protein K11893 impJ; type VI secretion system protein ImpJ D PAU_03059 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D PAU_00281 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D PAU_03836 conserved hypothetical Protein K11893 impJ; type VI secretion system protein ImpJ D PAU_02277 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH D PAU_00284 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH D PAU_03799 conserved hypothetical Protein K11895 impH; type VI secretion system protein ImpH D PAU_03039 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH D PAU_03817 conserved hypothetical Protein K11895 impH; type VI secretion system protein ImpH D PAU_02278 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG D PAU_00285 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG D PAU_03040 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG D PAU_03800 conserved hypothetical Protein K11896 impG; type VI secretion system protein ImpG D PAU_03818 conserved hypothetical Protein K11896 impG; type VI secretion system protein ImpG D PAU_04093 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG D PAU_02450 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG D PAU_02495 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG D PAU_02279 conserved hypothetical protein K11897 impF; type VI secretion system protein ImpF D PAU_03801 conserved hypothetical Protein K11897 impF; type VI secretion system protein ImpF D PAU_02281 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC D PAU_00287 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC D PAU_03060 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC D PAU_03791 conserved hypothetical Protein K11900 impC; type VI secretion system protein ImpC D PAU_03837 conserved hypothetical Protein K11900 impC; type VI secretion system protein ImpC D PAU_02282 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB D PAU_00288 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB D PAU_03790 conserved hypothetical Protein K11901 impB; type VI secretion system protein ImpB D PAU_03838 conserved hypothetical Protein K11901 impB; type VI secretion system protein ImpB D PAU_03061 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB D PAU_03789 conserved hypothetical Protein K11902 impA; type VI secretion system protein ImpA D PAU_02273 putative inner membrane protein K11902 impA; type VI secretion system protein ImpA D PAU_02280 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_00289 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_03056 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_03792 conserved hypothetical Protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_03833 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_02414 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_03050 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D PAU_00969 vgrG; conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03538 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_00262 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_04094 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02446 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02311 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03805 conserved hypothetical Protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02320 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03831 conserved hypothetical Protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_00273 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_00512 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02485 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02639 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03048 vgrG4; conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02276 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_02796 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D PAU_03815 conserved hypothetical Protein K11905 K11905; type VI secretion system protein D PAU_00286 conserved hypothetical protein K11905 K11905; type VI secretion system protein D PAU_00282 putative membrane protein K11906 vasD; type VI secretion system protein VasD D PAU_03816 conserved hypothetical Protein K11906 vasD; type VI secretion system protein VasD D PAU_02268 similar to clpa/b-type chaperone K11907 vasG; type VI secretion system protein VasG D PAU_00279 similar to clpa/b-type chaperone K11907 vasG; type VI secretion system protein VasG D PAU_03798 conserved hypothetical protein K11907 vasG; type VI secretion system protein VasG D PAU_03832 similar to clpa/b-type chaperone K11907 vasG; type VI secretion system protein VasG D PAU_00276 conserved hypothetical protein K11910 vasJ; type VI secretion system protein VasJ D PAU_03819 conserved hypothetical Protein K11910 vasJ; type VI secretion system protein VasJ D PAU_00274 conserved hypothetical protein K11911 vasL; type VI secretion system protein VasL D PAU_03814 conserved hypothetical Protein K11911 vasL; type VI secretion system protein VasL D PAU_00283 conserved hypothetical protein K11894 impI; type VI secretion system protein ImpI D PAU_00277 conserved hypothetical protein K11909 vasI; type VI secretion system protein VasI D PAU_02406 lpfA; similar to fimbrial subunit type 1 K07345 fimA; major type 1 subunit fimbrin (pilin) D PAU_03857 conserved hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin) D PAU_00974 phfS; major fimbrial subunit precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D PAU_00203 afaB; afab K07346 fimC; fimbrial chaperone protein D PAU_02408 yraJ; putative outer membrane protein K07347 fimD; outer membrane usher protein D PAU_03859 putative usher protein (putative outer membrane usher protein) K07347 fimD; outer membrane usher protein D PAU_00205 lpfC; similar to outer membrane usher protein K07347 fimD; outer membrane usher protein D PAU_00972 yraJ; putative outer membrane protein K07347 fimD; outer membrane usher protein D PAU_00727 mrfC; outer membrane fimbrial usher protein mrfc K12518 papC; outer membrane usher protein PapC D PAU_00728 mrfD; hypothetical fimbrial chaperone yfcs K12519 papD; chaperone protein PapD D PAU_01122 secA; preprotein translocase seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PAU_04347 secB; protein-export protein secb K03071 secB; preprotein translocase subunit SecB D PAU_03488 Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD D PAU_00344 secE; inner membrane preprotein translocase K03073 secE; preprotein translocase subunit SecE D PAU_03487 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D PAU_04032 secG; protein-export membrane protein secg (preprotein translocase band subunit) (p12) K03075 secG; preprotein translocase subunit SecG D PAU_01121 secM; secretion monitor precursor K13301 secM; secretion monitor D PAU_04196 secY; preprotein translocase secy subunit K03076 secY; preprotein translocase subunit SecY D PAU_03205 ffh; signal recognition particle protein (fifty-four homolog) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PAU_03729 ftsY; cell division protein ftsy K03110 ftsY; fused signal recognition particle receptor D PAU_03489 Hypothetical protein yajC K03210 yajC; preprotein translocase subunit YajC D PAU_04398 oxaA; similar to 60 kda inner-membrane protein yidc of escherichia coli K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAU_03881 tatA; sec-independent protein translocase protein tata/e homolog K03116 tatA; sec-independent protein translocase protein TatA D PAU_03880 tatB; sec-independent protein translocase protein tatb homolog K03117 tatB; sec-independent protein translocase protein TatB D PAU_03879 tatC; sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:pay02042] D PAU_03369 MCF toxin K19615 fitD; insecticidal toxin D PAU_02095 insecticidal toxin complex TccC K11021 tccC; insecticidal toxin complex protein TccC D PAU_03850 Insecticial toxin complex K11021 tccC; insecticidal toxin complex protein TccC D PAU_00880 tccC2; insecticidal toxin complex protein tccc2 K11021 tccC; insecticidal toxin complex protein TccC D PAU_03073 similar to rtx toxin rtxa K10953 rtxA; RTX toxin RtxA D PAU_03027 rtxA; Similar to RTX toxin RtxA K10953 rtxA; RTX toxin RtxA D PAU_03018 Similar to RTX toxin RtxA K10953 rtxA; RTX toxin RtxA D PAU_04057 ytfL; upf0053 inner membrane protein ytfl K03699 tlyC; magnesium and cobalt exporter, CNNM family D PAU_03207 yfjD; similar to putative membrane protein yfjd of escherichia coli K03699 tlyC; magnesium and cobalt exporter, CNNM family D PAU_00245 hylA; hemolysin phla protein K11016 shlA; hemolysin D PAU_00246 phlB; phla hemolysin secretion/activation protein phlb K11017 shlB; hemolysin activation/secretion protein D PAU_01043 exoU; type three secretion system effector protein K16638 exoU; exoenzyme U D PAU_02597 ymt; similar to yersinia pestis murine toxin ymt protein K11009 ymt; murine toxin C 02022 Two-component system [BR:pay02022] D PAU_03501 phoR; positive and negative sensor protein for pho regulon (positive an negative sensor protein for pho regulon phor) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PAU_03502 phoB; phosphate regulon transcriptional regulatory protein phob K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D PAU_01733 phoQ; sensor protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAU_01734 phoP; two-component response regulator phop K07660 phoP; two-component system, OmpR family, response regulator PhoP D PAU_00161 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D PAU_00160 ompR; transcriptional regulatory protein ompr K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D PAU_04310 cpxA; two-component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D PAU_04309 cpxR; transcriptional two-component response regulatory protein cpxr K07662 cpxR; two-component system, OmpR family, response regulator CpxR D PAU_01765 baeS; sensory histidine kinase protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D PAU_01764 baeR; transcriptional regulatory protein baer K07664 baeR; two-component system, OmpR family, response regulator BaeR D PAU_02989 kdpD; sensor protein (histidine kinase) K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PAU_02990 kdpE; transcriptional regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PAU_03644 arcB; aerobic respiration control sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PAU_00532 arcA; negative response regulator of genes in aerobic pathways, (sensors arcb and cpxa) (dye resistance protein) K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D PAU_01446 tctE; sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PAU_01445 tctD; two-component response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D PAU_02549 narX; similar to nitrate/nitrite sensor protein narx K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D PAU_01819 narP; nitrate/nitrite response regulator protein narp K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D PAU_00766 uhpB; two-component sensor histidine kinase uhpb, phosphorylates uhpa K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D PAU_00767 uhpA; two-component response regulator. hexose phosphate transport syste regulatory protein uhpa K20264 fusR; two-component system, NarL family, response regulator FusR D PAU_01559 rcsC; sensor protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D PAU_01561 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D PAU_01560 rcsB; capsular synthesis regulator component b K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D PAU_02266 pvpR; pvp response regulator (two-component response regulator bvg protein) K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D PAU_00829 barA; signal transduction histidine-protein kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PAU_02566 uvrY; response regulator uvry K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D PAU_02265 pvpS; pvp sensor (virulence sensor protein bvgs) K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D PAU_04020 yehU; putative 2-component sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D PAU_04021 yehT; hypothetical response regulatory protein yeht K02477 K02477; two-component system, LytTR family, response regulator D PAU_00178 glnL; nitrogen regulation protein nr(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PAU_00177 glnG; nitrogen regulation protein nr(i) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D PAU_01021 atoC; acetoacetate metabolism regulatory protein atoc K07714 atoC; two-component system, NtrC family, response regulator AtoC D PAU_01326 yfhK; two-component signal transduction system,sensor-like His kinase regulatory protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PAU_01328 yfhA; similar to putative 2-component transcriptional regulator yfha o escherichia coli K07715 glrR; two-component system, NtrC family, response regulator GlrR D PAU_02687 cheA; chemotaxis protein chea K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAU_02681 cheY; chemotaxis protein chey K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PAU_02682 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PAU_03782 two-component sensor/regulator precursor K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA D PAU_03781 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB D PAU_02024 hnr; Signal transduction response regulator K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:pay02035] D PAU_02687 cheA; chemotaxis protein chea K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAU_02686 cheW; purine binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D PAU_02683 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PAU_02682 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PAU_02681 cheY; chemotaxis protein chey K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PAU_02680 cheZ; chemotaxis protein chez K03414 cheZ; chemotaxis protein CheZ D PAU_02685 cheD; methyl-accepting chemotaxis protein i (mcp-i) (serine chemorecepto protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAU_02684 tap; methyl-accepting chemotaxis protein iv, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D PAU_02617 fliH; flagellar assembly protein flih K02411 fliH; flagellar assembly protein FliH D PAU_02618 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PAU_02619 fliJ; flagellar flij protein K02413 fliJ; flagellar protein FliJ D PAU_02624 fliO; flagellar protein flio K02418 fliO; flagellar protein FliO/FliZ D PAU_02625 fliP; flagellar biosynthetic protein flip precursor K02419 fliP; flagellar biosynthesis protein FliP D PAU_02626 fliQ; flagellar biosynthetic protein fliq K02420 fliQ; flagellar biosynthesis protein FliQ D PAU_02627 fliR; flagellar biosynthetic protein flir K02421 fliR; flagellar biosynthesis protein FliR D PAU_02665 flhA; flagellar biosynthesis protein flha K02400 flhA; flagellar biosynthesis protein FlhA D PAU_02666 flhB; flagellar biosynthetic protein flhb K02401 flhB; flagellar biosynthesis protein FlhB D PAU_01886 flhE; flagellar protein K03516 flhE; flagellar protein FlhE D PAU_02616 fliG; flagellar motor switch protein flig K02410 fliG; flagellar motor switch protein FliG D PAU_02622 fliM; flagellar motor switch protein flim K02416 fliM; flagellar motor switch protein FliM D PAU_02623 fliN; flagellar motor switch protein flin K02417 fliN; flagellar motor switch protein FliN D PAU_02615 fliF; flagellar basal-body m-ring protein K02409 fliF; flagellar M-ring protein FliF D PAU_02644 flgI; flagellar p-ring protein precursor (basal body p-ring protein) K02394 flgI; flagellar P-ring protein FlgI D PAU_02652 flgA; flagella basal body p-ring formation protein flga K02386 flgA; flagellar basal body P-ring formation protein FlgA D PAU_02645 flgH; flagellar l-ring protein precursor (basal body l-ring protein) K02393 flgH; flagellar L-ring protein FlgH D PAU_02621 fliL; flagellar flil protein K02415 fliL; flagellar protein FliL D PAU_02614 fliE; flagellar hook-basal body complex protein flie K02408 fliE; flagellar hook-basal body complex protein FliE D PAU_02620 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D PAU_02651 flgB; flagellar basal-body rod protein flgb (putative proximal rod protein) K02387 flgB; flagellar basal-body rod protein FlgB D PAU_02650 flgC; flagellar basal-body rod protein flgc (putative proximal rod protein) K02388 flgC; flagellar basal-body rod protein FlgC D PAU_02649 flgD; basal-body rod modification protein flgd (flagellar protein for th initiation of hook assembly) K02389 flgD; flagellar basal-body rod modification protein FlgD D PAU_02647 flgF; flagellar basal-body rod protein flgf (putative proximal rod protein) K02391 flgF; flagellar basal-body rod protein FlgF D PAU_02646 flgG; flagellar basal-body rod protein flgg (distal rod protein) K02392 flgG; flagellar basal-body rod protein FlgG D PAU_02643 flgJ; peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ D PAU_02648 flgE; flagellar hook protein flge K02390 flgE; flagellar hook protein FlgE D PAU_02642 flgK; flagellar hook-associated protein 1 flgK K02396 flgK; flagellar hook-associated protein 1 D PAU_02641 flgL; flagellar hook-associated protein 3 (hap3) (hook-filament junctio protein) K02397 flgL; flagellar hook-associated protein 3 FlgL D PAU_02654 flgN; flagellar biosynthesis protein (flagella synthesis protein flgn) K02399 flgN; flagellar biosynthesis protein FlgN D PAU_02609 fliC; flagellin (flic) K02406 fliC; flagellin D PAU_02610 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D PAU_02611 fliS; flagellar protein flis K02422 fliS; flagellar secretion chaperone FliS D PAU_02612 fliT; flagellar protein flit K02423 fliT; flagellar protein FliT D PAU_02691 flhD; transcriptional activator flhd K02403 flhD; flagellar transcriptional activator FlhD D PAU_02690 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D PAU_02608 fliA; rna polymerase sigma factor for flagellar operon (sigma-f factor (sigma-27) (sigma-28) K02405 fliA; RNA polymerase sigma factor FliA D PAU_02689 motA; chemotaxis mota protein K02556 motA; chemotaxis protein MotA D PAU_02688 motB1; chemotaxis motb protein K02557 motB; chemotaxis protein MotB D PAU_03993 similar to amino acid abc transporter K02424 tcyA; L-cystine transport system substrate-binding protein D PAU_03990 yecS; similar to amino acid abc transporter K02424 tcyA; L-cystine transport system substrate-binding protein D PAU_02607 fliZ; fliz protein K02425 fliZ; regulator of sigma S factor FliZ D PAU_02653 flgM; negative regulator of flagellin synthesis (anti-sigma-28 factor) flgm K02398 flgM; negative regulator of flagellin synthesis FlgM D PAU_03279 conserved hypothetical protein K02669 pilT; twitching motility protein PilT D PAU_01384 pilF; putative fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF D PAU_02406 lpfA; similar to fimbrial subunit type 1 K07345 fimA; major type 1 subunit fimbrin (pilin) D PAU_03857 conserved hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin) D PAU_00974 phfS; major fimbrial subunit precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D PAU_00203 afaB; afab K07346 fimC; fimbrial chaperone protein D PAU_02408 yraJ; putative outer membrane protein K07347 fimD; outer membrane usher protein D PAU_03859 putative usher protein (putative outer membrane usher protein) K07347 fimD; outer membrane usher protein D PAU_00205 lpfC; similar to outer membrane usher protein K07347 fimD; outer membrane usher protein D PAU_00972 yraJ; putative outer membrane protein K07347 fimD; outer membrane usher protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pay04812] D PAU_03703 mreB; rod shape-determining protein mreb K03569 mreB; rod shape-determining protein MreB and related proteins D PAU_01118 ftsZ; cell division protein ftsz K03531 ftsZ; cell division protein FtsZ D PAU_01117 ftsA; cell division protein ftsa K03590 ftsA; cell division protein FtsA D PAU_02429 minC; septum site-determining protein minc K03610 minC; septum site-determining protein MinC D PAU_02430 minD; septum site-determining protein (cell division inhibitor mind) K03609 minD; septum site-determining protein MinD D PAU_02431 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D PAU_pPAU1_0007 putative plasmid stability protein K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:pay04147] D PAU_03384 Chaperone protein htpG (Heat shock protein htpG) K04079 HSP90A; molecular chaperone HtpG D PAU_00841 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAU_01974 gapA; glyceraldehyde-3-phosphate dehydrogenase a (gapdh-a) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAU_00878 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PAU_01920 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAU_02458 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAU_00302 ppiA; peptidyl-prolyl cis-trans isomerase A precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PAU_03493 unnamed protein product K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D PAU_03756 groL; 60 kda chaperonin (protein cpn60) (groel protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAU_00543 dnaK; chaperone hsp70, autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK D PAU_03932 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAU_01826 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PAU_00342 tufA; elongation factor tu-b (ef-tu-b) K02358 tuf; elongation factor Tu D PAU_04221 tufA; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu D PAU_01712 hinT; similar to histidine triad-like protein ycff of escherichia coli K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PAU_02123 yfeH; putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PAU_01099 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_02433 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAU_03772 yqeF; probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PAU_03383 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PAU_03389 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PAU_04234 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAU_04235 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAU_04067 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAU_00517 similar to cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D PAU_04051 fbp; fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase) K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAU_00541 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PAU_04257 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D PAU_00179 glnA; glutamine synthetase (glutamate--ammonia ligase) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAU_03878 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PAU_00480 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAU_01152 serA; d-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAU_00406 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAU_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAU_02443 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAU_04262 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PAU_02950 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:pay02048] D PAU_02722 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D PAU_00706 ygcB; conserved hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PAU_02735 conserved hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PAU_03614 conserved hypothetical Protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PAU_00707 conserved hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA D PAU_00708 conserved hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB D PAU_00709 conserved hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC D PAU_00710 conserved hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD D PAU_00711 conserved hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE D PAU_02721 conserved hypothetical protein K19127 csy1; CRISPR-associated protein Csy1 D PAU_02734 conserved hypothetical protein K19127 csy1; CRISPR-associated protein Csy1 D PAU_02720 conserved hypothetical protein K19128 csy2; CRISPR-associated protein Csy2 D PAU_02719 conserved hypothetical protein K19129 csy3; CRISPR-associated protein Csy3 D PAU_02718 conserved hypothetical protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D PAU_03936 conserved hypothetical protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D PAU_03970 hsdR; type i site-specific deoxyribonuclease hsdr K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D PAU_03938 hsdS; type i restriction enzyme ecobi specificity protein (s protein (s.ecobi) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D PAU_03937 hsdM; type I restriction enzyme, modification subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D PAU_03968 hsdM; type I restriction enzyme, modification subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D PAU_00069 dam; DNA adenine methylase (deoxyadenosyl-methyltransferase (dna adenine methyltransferase) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_04395 n6 adenine-specific dna methyltransferase, d12 class K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_04304 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAU_03946 yhdJ; conserved hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D PAU_04300 cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_04299 dna-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAU_03934 mrr; mrr restriction system protein K07448 mrr; restriction system protein D PAU_00957 gene0020; putative endoribonuclease SymE3 K19048 symE; toxic protein SymE D PAU_00951 gene0015; putative endoribonuclease SymE2 K19048 symE; toxic protein SymE D PAU_03361 conserved hypothetical protein K19048 symE; toxic protein SymE D PAU_00943 gene0010; putative endoribonuclease SymE K19048 symE; toxic protein SymE D PAU_00965 gene0028; putative endoribonuclease SymE4 K19048 symE; toxic protein SymE D PAU_03017 yjiW; conserved hypothetical protein K19048 symE; toxic protein SymE D PAU_00799 chpB; pemk-like protein 2 K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D PAU_00355 putative transcriptional regulator pemk-like protein K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D PAU_00800 conserved hypothetical protein K18842 chpS; antitoxin ChpS D PAU_00354 chpR; putative transcriptional regulator pemi-like protein K18842 chpS; antitoxin ChpS D PAU_03518 conserved hypothetical Protein K19155 yhaV; toxin YhaV [EC:3.1.-.-] D PAU_03517 sohA; putative protease; htra suppressor protein (suppressor protein soha) K19156 prlF; antitoxin PrlF D PAU_00989 conserved hypothetical protein K19156 prlF; antitoxin PrlF D PAU_03065 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE D PAU_00194 relE; similar to rele-like protein K06218 relE; mRNA interferase RelE/StbE D PAU_00193 relB; negative regulator of translation relb protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D PAU_03066 conserved hypothetical protein K18923 stbD; antitoxin StbD D PAU_00187 ef0033; conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D PAU_03797 relb antitoxin K07473 dinJ; DNA-damage-inducible protein J D PAU_01432 dinJ; damage-inducible protein j (damage-inducible protein dinj) K07473 dinJ; DNA-damage-inducible protein J D PAU_00186 dinJ2; Hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D PAU_02810 yefM; conserved hypothetical protein K19159 yefM; antitoxin YefM D PAU_04107 conserved hypothetical protein K19159 yefM; antitoxin YefM D PAU_02086 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D PAU_00435 hipB; transcriptional regulator, hipb ortholog K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D PAU_00212 putative hth-type transcriptional regulator K18843 hicB; antitoxin HicB D PAU_03686 conserved hypothetical Protein K18843 hicB; antitoxin HicB D PAU_03401 Haemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein D PAU_01951 pspC; phage shock protein c K03973 pspC; phage shock protein C D PAU_01950 pspB; phage shock protein b K03970 pspB; phage shock protein B D PAU_00219 conserved hypothetical protein K19163 ccdB; toxin CcdB D PAU_00220 conserved hypothetical protein K19164 ccdA; antitoxin CcdA D PAU_03735 conserved hypothetical Protein K19092 parE1_3_4; toxin ParE1/3/4 D PAU_01431 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D PAU_04268 yacB; yacb K19092 parE1_3_4; toxin ParE1/3/4 D PAU_02543 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D PAU_03734 conserved hypothetical Protein K07746 parD1_3_4; antitoxin ParD1/3/4 D PAU_03071 doc; death-on-curing protein K07341 doc; death on curing protein D PAU_03072 yhhV; conserved hypothetical protein K19165 phd; antitoxin Phd D PAU_00584 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D PAU_02160 conserved hypothetical protein K07334 higB-1; toxin HigB-1 D PAU_02508 higB; conserved hypothetical protein K07334 higB-1; toxin HigB-1 D PAU_00583 ygjM; conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D PAU_02161 yddM; HTH transcriptional regulator K21498 higA-1; antitoxin HigA-1 D PAU_01616 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1 D PAU_02613 similar to virulence-associated protein and proteic killer activ protein K21498 higA-1; antitoxin HigA-1 D PAU_02509 yddM; conserved hypothetical protein K21498 higA-1; antitoxin HigA-1 D PAU_00821 conserved hypothetical protein K18829 mvpT; antitoxin VapB D PAU_02699 yceP; conserved hypothetical protein K12148 bssS; biofilm regulator BssS D PAU_01118 ftsZ; cell division protein ftsz K03531 ftsZ; cell division protein FtsZ D PAU_03703 mreB; rod shape-determining protein mreb K03569 mreB; rod shape-determining protein MreB and related proteins D PAU_03526 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PAU_03527 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PAU_01411 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAU_03955 ykfI; conserved hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D PAU_03956 conserved hypothetical protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins D PAU_01209 ygfX; conserved hypothetical protein K19168 cptA; toxin CptA D PAU_01208 ygfY; conserved hypothetical protein K09159 cptB; antitoxin CptB D PAU_01362 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_00158 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAU_04154 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:pay04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pay04090] C 01504 Antimicrobial resistance genes [BR:pay01504] D PAU_02905 aac(6')-Ic; conserved hypothetical protein K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82] D PAU_02677 similar to tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D PAU_04381 macrolide-efflux protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D PAU_01227 similar to antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D PAU_01186 putative transmembrane-transport protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D PAU_02294 blaA; ctx-m type extended-spectrum beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D PAU_01733 phoQ; sensor protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAU_01734 phoP; two-component response regulator phop K07660 phoP; two-component system, OmpR family, response regulator PhoP D PAU_03398 Acriflavin resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D PAU_03399 Acridine efflux pump K18138 acrB; multidrug efflux pump D PAU_00987 cueR; similar to putative transcriptional regulator ybbi of escherichi coli K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PAU_03531 tolC; outer membrane protein tolc K12340 tolC; outer membrane protein D PAU_01889 probable outer membrane protein K12340 tolC; outer membrane protein D PAU_02198 putative outer membrane efflux protein K12340 tolC; outer membrane protein D PAU_02765 ompN2; outer membrane protein n (porin ompn) K09476 ompF; outer membrane pore protein F D PAU_02764 ompN1; outer membrane protein ompN K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:pay00536] D PAU_02288 putative adhesin/hemagglutinin/hemolysin K15125 fhaB; filamentous hemagglutinin D PAU_00445 similar to hemagglutinin/hemolysin-related proteins. putativ transmembrane protein K15125 fhaB; filamentous hemagglutinin D PAU_03306 Putative adhesin/hemagglutinin/hemolysin K15125 fhaB; filamentous hemagglutinin D PAU_01548 conserved hypothetical protein K15125 fhaB; filamentous hemagglutinin D PAU_01485 putative adhesin/hemagglutinin/hemolysin K15125 fhaB; filamentous hemagglutinin D PAU_00906 filamentous haemagglutinin family protein K15125 fhaB; filamentous hemagglutinin D PAU_03026 similar to hemagglutinin/hemolysin-related proteins. putativ transmembrane protein K15125 fhaB; filamentous hemagglutinin D PAU_01163 similarities with hemagglutinin/hemolysin-related protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pay00537] D PAU_00480 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:pay03200] D PAU_03121 gene0067; similar to cryptic prophage endopeptidase b1362 K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D PAU_01071 Rz; similar to probable endopeptidase gp15 protein of lamdoid prophage K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D PAU_03329 Putative endopeptidase protein Rz of prophage K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D PAU_03582 gene0098; similar to cryptic prophage endopeptidase b1362 K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pay03100] D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-8 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys D tRNA-Gln-3 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Glu-4 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-6 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-His tRNA-His K14226 tRNA-His; tRNA His D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-7 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-5 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-20 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-21 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-6 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-12 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-11 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-17 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-16 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-10 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-15 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-19 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-18 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Lys-8 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-5 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-7 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-6 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Sec tRNA-Sec K14238 tRNA-Sec; tRNA Sec D 16S_rRNA-3 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-7 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-1 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-2 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-4 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-6 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-5 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-6 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-3 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-4 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-5 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 5S_rRNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PAU_03522 dkgA; 2,5-diketo-d-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D PAU_02014 conserved hypothetical protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410] D PAU_02019 orf39; conserved hypothetical protein K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D PAU_03922 conserved hypothetical protein K10530 lctO; L-lactate oxidase [EC:1.1.3.2] D PAU_02252 pyruvate ferredoxin/flavodoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D PAU_03625 fadH; 2,4-dienoyl-coa reductase [nadph] (2,4-dienoyl coenzyme a reductase) K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D PAU_01185 papC; similar to dehydrogenase papc of streptomyces pristinaespiralis K24002 cmlC; 4-amino-4-deoxyprephenate dehydrogenase [EC:1.3.1.121] D PAU_02907 conserved hypothetical protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D PAU_03914 qor; quinone oxidoreductase (nadph:quinone reductase) (zeta-crystalli homolog protein) K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D PAU_02332 conserved hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D PAU_02417 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D PAU_04056 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D PAU_01975 msrB; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D PAU_01460 yfcG; putative s-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D PAU_01793 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PAU_01957 tpx; thiol peroxidase (scavengase p20) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PAU_00084 yhhW; conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D PAU_00085 yhhW; conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D PAU_01352 hmpA; flavohemoprotein (hemoglobin-like protein) K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D PAU_01847 ftnA; ferritin-1 K02217 ftnA; ferritin [EC:1.16.3.2] D PAU_00797 cueO; blue copper oxidase cueO precursor (copper efflux oxidase) K14588 cueO; cuproxidase [EC:1.16.3.4] D PAU_04259 fpr; ferredoxin--nadp reductase (fnr) (flavodoxin reductase) flxr (fldr (methyl viologen resistance protein a) (da1) K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D PAU_01790 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D PAU_04003 nrdG; nrdg subunit of ribonucleoside triphosphate reductase activase K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D PAU_02838 pflA; pyruvate formate lyase activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PAU_00690 pcm; protein-l-isoaspartate o-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D PAU_01924 cfa; cyclopropane-fatty-acyl-phospholipid synthase (cyclopropane fatty aci synthase) (cfa synthase) K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D PAU_01076 tehB; putative tellurite resistance protein K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D PAU_00141 spnH; conserved hypothetical protein K05303 K05303; O-methyltransferase [EC:2.1.1.-] D PAU_02125 conserved hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D PAU_02130 conserved hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D PAU_04065 putative carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D PAU_00482 conserved hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D PAU_02394 nol; conserved hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D PAU_03149 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D PAU_04007 yhbS; similar to hypothetical acetyltransferase yhbs of escherichia coli K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D PAU_01719 yiaC; hypothetical acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D PAU_01248 conserved hypothetical protein K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D PAU_02849 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D PAU_03187 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D PAU_00581 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D PAU_03251 Thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D PAU_02018 conserved hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D PAU_01901 ydiA; conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D PAU_03548 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D PAU_02570 orf7; conserved hypothetical protein K26088 vopS; protein adenylyltransferase VopS [EC:2.7.7.108] D PAU_04011 ppsA; similar to phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D PAU_00418 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D PAU_02963 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D PAU_02063 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D PAU_01418 sixA; phosphohistidine phosphatase sixa (rx6) K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D PAU_02553 endA; endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D PAU_01711 ycfH; conserved hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PAU_00493 yjjV; conserved hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PAU_03011 conserved hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-] D PAU_03219 Esterase yafA K11750 frsA; esterase FrsA [EC:3.1.-.-] D PAU_03122 gene0068; putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PAU_03330 Phage related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PAU_03581 gene0097; phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PAU_04177 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D PAU_00456 def1; peptide deformylase 2 K01462 PDF; peptide deformylase [EC:3.5.1.88] D PAU_04001 yjgF; conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PAU_03549 ygiF; conserved hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D PAU_01230 yfaO; conserved hypothetical protein K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-] D PAU_01698 yceF; conserved hypothetical protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D PAU_00050 ravA; ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PAU_01100 conserved hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D PAU_02017 orf37; conserved hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D PAU_00758 conserved hypothetical protein K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D PAU_00601 csdA; cysteine sulfinate desulfinase (csd) K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D PAU_02016 gclR; putative regulatory protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D PAU_01183 papB; similar to papb protein and to chorismate mutase/prephenat dehydrogenase K23874 cmlD; 4-amino-4-deoxychorismate mutase [EC:5.4.99.67] D PAU_04013 similar to amp-ligase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1] D PAU_04050 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D PAU_02117 rnfD; electron transport complex protein rnfd K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D PAU_02118 rnfC; electron transport complex protein rnfc K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D PAU_02119 rnfB; 4Fe-4S ferredoxin, iron-sulphur binding K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D PAU_03257 Na(+)-translocating NADH-quinone reductase, chain A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D PAU_03256 Na(+)-translocating NADH-quinone reductase, chain B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D PAU_03255 Na(+)-translocating NADH-quinone reductase, chain C. K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D PAU_03254 Na(+)-translocating NADH-quinone reductase, chain D. K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D PAU_03253 Na(+)-translocating NADH-quinone reductase, chain E (Na-NQR complex subunit 5) K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D PAU_03252 Na+-translocating NADH-ubiquinone oxidoreductase, beta chain. K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D PAU_03733 zntA; cation-transporting atpase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D PAU_00812 sfsA; sugar fermentation stimulation protein homolog K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D PAU_04393 fdhD; protein fdhd homolog K02379 fdhD; FdhD protein D PAU_01367 fdx; ferredoxin, 2fe-2s K04755 fdx; ferredoxin, 2Fe-2S D PAU_01554 yfaE; similar to ferredoxin-like protein yfae of escherichia coli K11107 yfaE; ferredoxin D PAU_02116 rnfG; electron transport complex protein rnfg K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D PAU_02115 rnfE; electron transport complex protein rnfe K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D PAU_02120 rnfA; electron transport complex protein rnfa K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D PAU_00046 mioC; protein mioc, involved in modulation of initiation at oric, initiation of chromosome replication K06205 mioC; MioC protein D PAU_01210 fldB; flavodoxin-2 K03840 fldB; flavodoxin II D PAU_01363 nifU; nifu protein K04488 iscU; nitrogen fixation protein NifU and related proteins D PAU_04153 conserved hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins D PAU_03082 fldA; flavodoxin 1 K03839 fldA; flavodoxin I C 99983 Lipid metabolism C 99984 Nucleotide metabolism D PAU_03173 nrdI; protein nrdi K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D PAU_01406 cysZ; sulfate transport protein cysz involved in cysteine synthesis K06203 cysZ; CysZ protein D PAU_03280 conserved hypothetical protein K06997 yggS; PLP dependent protein D PAU_03624 conserved hypothetical protein K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D PAU_02080 yciS; putative inner membrane protein ycis K08992 lapA; lipopolysaccharide assembly protein A D PAU_02081 yciM; conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B D PAU_01661 waaX; conserved hypothetical protein K07270 K07270; glycosyl transferase, family 25 D PAU_01580 waaX; putative beta1,4-galactosyltransferase waax K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D PAU_04128 hemY; bacterial HemY porphyrin biosynthesis protein K02498 hemY; HemY protein D PAU_03882 ubiB; probable ubiquinone biosynthesis protein ubib K03688 ubiB; ubiquinone biosynthesis protein D PAU_03883 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D PAU_03537 yqiC; conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D PAU_00295 mobB; molybdopterin-guanine dinucleotide biosynthesis protein b K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D PAU_03524 sufI; suppressor of ftsi K04753 sufI; suppressor of ftsI D PAU_02347 conserved hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D PAU_03633 membrane protein K15977 K15977; putative oxidoreductase D PAU_00873 conserved hypothetical protein K15977 K15977; putative oxidoreductase D PAU_03188 conserved hypothetical protein K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D PAU_03694 conserved hypothetical Protein K03623 yhcO; ribonuclease inhibitor D PAU_02853 cspD; cold shock-like protein cspd (csp-d) K03704 cspA; cold shock protein D PAU_01028 cspI; cold shock-like protein (cps-i) K03704 cspA; cold shock protein D PAU_03170 cspE; cold shock-like protein cspe K03704 cspA; cold shock protein D PAU_02695 cspC; cold shock-like protein cspc (csp-c) K03704 cspA; cold shock protein D PAU_01756 cspC; cold shock protein K03704 cspA; cold shock protein D PAU_02728 H0160; conserved hypothetical protein K07741 antB; anti-repressor protein D PAU_03405 Nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2 D PAU_00153 yhgF; conserved hypothetical protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D PAU_02422 hslJ; heat shock protein hslj K03668 hslJ; heat shock protein HslJ D PAU_02852 clpS; atp-dependent clp protease adaptor protein clps K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D PAU_03422 Trigger factor K03545 tig; trigger factor D PAU_04386 fdhE; formate dehydrogenase-n activity influencing protein fdhe K02380 fdhE; FdhE protein D PAU_02378 ureE; urease accessory protein K03187 ureE; urease accessory protein D PAU_02377 ureF; Urease accesory protein uref K03188 ureF; urease accessory protein D PAU_02376 ureG; urease accessory protein ureg K03189 ureG; urease accessory protein D PAU_02375 ureD; urease accessory protein K03190 ureD; urease accessory protein D PAU_01269 smpB; small protein b-RNA Binding protein K03664 smpB; SsrA-binding protein D PAU_03172 conserved hypothetical protein K06191 nrdH; glutaredoxin-like protein NrdH D PAU_04166 yifB; putative 2-component regulator K07391 comM; magnesium chelatase family protein D PAU_03273 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase D PAU_00307 yhfA; conserved hypothetical protein K07397 yhfA; putative redox protein D PAU_00137 gntY; conserved hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA C 99976 Replication and repair D PAU_00610 xni; exodeoxyribonuclease ix-like protein K01146 xni; protein Xni D PAU_04372 radC; dna repair protein radc K03630 radC; DNA repair protein RadC D PAU_03957 yfjY; similar putative radc-like protein ykfg of escherichia coli K03630 radC; DNA repair protein RadC D PAU_03885 rmuC; conserved hypothetical protein K09760 rmuC; DNA recombination protein RmuC D PAU_03639 conserved hypothetical Protein K07460 yraN; putative endonuclease D PAU_04006 yhbQ; conserved hypothetical protein K07461 K07461; putative endonuclease D PAU_04176 smf; conserved hypothetical protein K04096 smf; DNA processing protein D PAU_00724 recombinase, type 1 fimbriae regulatory protein K07357 fimB; type 1 fimbriae regulatory protein FimB D PAU_00197 fimB; type 1 fimbriae regulatory protein fimb K07357 fimB; type 1 fimbriae regulatory protein FimB D PAU_02586 fimB; similar to type 1 fimbriae regulatory recombinase protein fimb o escherichia coli K07357 fimB; type 1 fimbriae regulatory protein FimB D PAU_03118 gene0064; Phage terminase, large subunit K06909 xtmB; phage terminase large subunit D PAU_03585 gene0101; similar to phage terminase large subunit K06909 xtmB; phage terminase large subunit D PAU_02842 ycaJ; conserved hypothetical protein K07478 ycaJ; putative ATPase D PAU_04175 conserved hypothetical protein K07479 yrdD; putative DNA topoisomerase D PAU_01005 yabA; regulatory prophage protein K06919 K06919; putative DNA primase/helicase D PAU_02725 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase D PAU_03979 yabA; alpha replication protein of prophage cp-933i K06919 K06919; putative DNA primase/helicase D PAU_03136 gene0076; conserved hypothetical protein K07501 K07501; 3'-5' exonuclease D PAU_03567 gene0089; conserved hypothetical protein K07501 K07501; 3'-5' exonuclease D PAU_01660 ISPlu1B; transposase, IS30 family K07482 K07482; transposase, IS30 family D PAU_02062 is putative transposase K07483 K07483; transposase D PAU_00171 transposase, orfa, is3/is911 family K07483 K07483; transposase D PAU_01918 transposase is3/is911 K07483 K07483; transposase D PAU_03950 transposase, orfa, is3/is911 family K07483 K07483; transposase D PAU_01487 transposase is3/is911 K07483 K07483; transposase D PAU_01079 is putative transposase K07483 K07483; transposase D PAU_03988 is putative transposase K07483 K07483; transposase D PAU_03497 Transposase K07483 K07483; transposase D PAU_03324 conserved hypothetical protein K07484 K07484; transposase D PAU_03326 Transposase K07484 K07484; transposase D PAU_03774 putative is element transposase K07491 rayT; REP-associated tyrosine transposase D PAU_03520 putative transposase K07491 rayT; REP-associated tyrosine transposase D PAU_00900 transposase insg for insertion sequence element is4 K07495 K07495; putative transposase D PAU_03842 ydcM; putative is element transposase K07496 K07496; putative transposase D PAU_03773 putative transposase tnpb of insertion sequence is609 K07496 K07496; putative transposase D PAU_01917 transposase K07497 K07497; putative transposase D PAU_00172 insK; putative transposase InsK for insertion sequence element IS150 K07497 K07497; putative transposase D PAU_01080 putative transposase for insertion sequence element is150 K07497 K07497; putative transposase D PAU_01488 yadA; yada protein K07497 K07497; putative transposase D PAU_02061 integrase, catalytic region K07497 K07497; putative transposase D PAU_03496 YadA protein K07497 K07497; putative transposase D PAU_03949 putative transposase for insertion sequence element is150 K07497 K07497; putative transposase D PAU_03989 putative transposase insk for insertion sequence element is150 K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D PAU_01949 pspA; phage shock protein a K03969 pspA; phage shock protein A D PAU_03387 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PAU_04130 yifK; probable transport protein yifk K03293 TC.AAT; amino acid transporter, AAT family D PAU_01502 cycA; cyca serine/alanine/glycine apc transporter K03293 TC.AAT; amino acid transporter, AAT family D PAU_02704 yceE; putative proton dependent di-tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D PAU_00908 yhiP; similar to putative di-tripeptide transporter protein yhip of escherichia coli K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D PAU_02712 yidK; putative cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family D PAU_01078 similar to sodium:alanine symporter and other amino acid transport proteins K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D PAU_01744 yaaJ; inner membrane transport protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D PAU_03500 Branched chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D PAU_00494 yeiM; similar to hypothetical transport protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D PAU_02043 ispZ; probable intracellular septation protein K06190 ispZ; intracellular septation protein D PAU_04349 yibP; similar to putative membrane protein yibp of escherichia coli K22719 envC; murein hydrolase activator C 99993 Cell motility D PAU_01713 ycfM; putative outer membrane lipoprotein K07337 K07337; penicillin-binding protein activator D PAU_02742 yccR; conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins D PAU_00635 putative membrane protein K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D PAU_01131 ampE; signaling protein ampe K03807 ampE; AmpE protein D PAU_01853 proQ; prop effector K03607 proQ; ProP effector D PAU_00105 uspA; universal stress protein a K06149 uspA; universal stress protein A D PAU_02372 uspE; conserved hypothetical protein K14055 uspE; universal stress protein E D PAU_02565 uspG; conserved hypothetical protein K11932 uspG; universal stress protein G D PAU_04022 cstA; carbon starvation protein a K06200 cstA; carbon starvation protein D PAU_00180 typA; gtp-binding protein typa/bipa (tyrosine phosphorylated protein a) K06207 typA; GTP-binding protein D PAU_03793 conserved hypothetical protein K07169 K07169; FHA domain-containing protein D PAU_03146 conserved hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D PAU_02552 phoH; phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D PAU_03551 ygiM; similar to putative exported protein ygim of escherichia coli K07184 ygiM; SH3 domain protein D PAU_00519 smp; small membrane protein smp K07186 smp; membrane protein D PAU_03433 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D PAU_02843 lolA; outer-membrane lipoprotein carrier protein precursor (p20) K03634 lolA; outer membrane lipoprotein carrier protein D PAU_02527 lolB; outer-membrane lipoprotein lolb precursor K02494 lolB; outer membrane lipoprotein LolB D PAU_01413 vacJ; vacj lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D PAU_04141 wzzE; lipopolysaccharide biosynthesis protein wzze K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D PAU_01935 slyB; outer membrane lipoprotein slyb K06077 slyB; outer membrane lipoprotein SlyB D PAU_00653 hlpA; chaperone protein skp precursorlocated in outer membrane or nucleoid K06142 hlpA; outer membrane protein D PAU_00691 nlpD; lipoprotein nlpd K06194 nlpD; lipoprotein NlpD D PAU_04024 nlpI; lipoprotein nlpi precursor K05803 nlpI; lipoprotein NlpI D PAU_02049 ompW; outer membrane protein w K07275 ompW; outer membrane protein D PAU_01245 conserved hypothetical protein K07280 K07280; outer membrane protein D PAU_02435 similar to hypothetical membrane protein yeay of escherichia coli K07285 slp; outer membrane lipoprotein D PAU_03424 conserved hypothetical protein K07286 yajG; uncharacterized lipoprotein D PAU_02888 asmA; protein asma K07289 asmA; AsmA protein D PAU_00986 ybbJ; inner membrane protein ybbj K07340 ybbJ; inner membrane protein D PAU_04019 putative membrane protein K01993 ABC-2.TX; HlyD family secretion protein D PAU_02461 conserved hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein D PAU_01806 membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D PAU_02197 membrane Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein D PAU_01385 yfgA; conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D PAU_00166 phoU; phosphate transport system protein phou K02039 phoU; phosphate transport system protein D PAU_04219 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D PAU_02478 cutC; copper homeostasis protein cutc K06201 cutC; copper homeostasis protein D PAU_00566 apaG; conserved hypothetical protein K06195 apaG; ApaG protein D PAU_04123 cyaY; conserved hypothetical protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D PAU_04151 conserved hypothetical protein K07222 K07222; putative flavoprotein involved in K+ transport D PAU_03240 conserved hypothetical protein K07222 K07222; putative flavoprotein involved in K+ transport D PAU_01898 chuS; putative heme/hemoglobin transport protein (putative uncharacterize protein ecs4379) K07225 hmuS; putative hemin transport protein B B 09194 Poorly characterized C 99996 General function prediction only D PAU_01456 cvpA; colicin v production protein (dede protein) (pur regulon 18 kd protein) K03558 cvpA; membrane protein required for colicin V production D PAU_02983 chitinase class i family protein K03791 K03791; putative chitinase D PAU_03861 bax; bax protein K03796 bax; Bax protein D PAU_02750 pqiB; paraquat-inducible protein b K06192 pqiB; paraquat-inducible protein B D PAU_00491 osmY; osmotically inducible protein y precursor K04065 osmY; hyperosmotically inducible periplasmic protein D PAU_02706 csaA; methionine--tRNA ligase protein K06878 K06878; tRNA-binding protein D PAU_03371 conserved hypothetical protein K06886 glbN; hemoglobin D PAU_00825 yadR; conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein D PAU_01907 ydiC; Iron-sulphur cluster assembly protein K05997 sufA; Fe-S cluster assembly protein SufA D PAU_01908 sufB; SUF system FeS cluster assembly, SufB K09014 sufB; Fe-S cluster assembly protein SufB D PAU_01910 ynhC; SUF system FeS cluster assembly K09015 sufD; Fe-S cluster assembly protein SufD D PAU_01857 similar to probable membrane protein ydjm of escherichia coli K07038 K07038; inner membrane protein D PAU_02581 php; phosphotriesterase homology protein K07048 PTER; phosphotriesterase-related protein D PAU_00242 similar to putative membrane protein yhjd of escherichia coli K07058 K07058; membrane protein D PAU_03758 fxsA; fxsa protein (suppressor of f exclusion of phage t7) K07113 fxsA; UPF0716 protein FxsA D PAU_01912 sufE; cysteine desulfuration protein sufe K02426 sufE; cysteine desulfuration protein SufE D PAU_00600 ygdK; conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE D PAU_02701 yceA; conserved hypothetical protein K07146 K07146; UPF0176 protein D PAU_01736 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein D PAU_03068 conserved hypothetical protein K03744 lemA; LemA protein D PAU_03070 conserved hypothetical protein K03744 lemA; LemA protein D PAU_00531 creA; conserved hypothetical protein K05805 creA; CreA protein D PAU_01086 sprT; conserved hypothetical protein K02742 sprT; SprT protein D PAU_01455 dedD; putative membrane protein K03749 dedD; DedD protein D PAU_00070 damX; putative membrane protein K03112 damX; DamX protein D PAU_02897 sanA; sana protein K03748 sanA; SanA protein D PAU_01452 dedA; deda protein (dsg-1 protein) K03975 dedA; membrane-associated protein D PAU_02751 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D PAU_02174 yjfL; putative inner membrane protein yjfl K08989 K08989; putative membrane protein D PAU_01954 ycjF; putative membrane protein ycjf K08990 ycjF; putative membrane protein D PAU_03731 conserved hypothetical Protein K08993 yhhL; putative membrane protein D PAU_02023 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein D PAU_03402 conserved hypothetical protein K09914 K09914; putative lipoprotein D PAU_00364 malM; maltose operon periplasmic protein K05775 malM; maltose operon periplasmic protein D PAU_02914 similar to alkylphosphonate uptake protein phna K06193 phnA; protein PhnA C 99997 Function unknown D PAU_01278 similarities with phospholipase a accessory protein K06867 K06867; uncharacterized protein D PAU_01146 conserved hypothetical protein K06871 K06871; uncharacterized protein D PAU_02463 ydeM; conserved hypothetical protein K06871 K06871; uncharacterized protein D PAU_01621 similar to hcp protein K06887 K06887; uncharacterized protein D PAU_00101 conserved hypothetical protein K06887 K06887; uncharacterized protein D PAU_00318 putative membrane protein similar to hcp protein K06887 K06887; uncharacterized protein D PAU_00922 conserved hypothetical protein K06887 K06887; uncharacterized protein D PAU_01466 conserved hypothetical protein K06887 K06887; uncharacterized protein D PAU_00132 conserved hypothetical protein K06887 K06887; uncharacterized protein D PAU_00788 conserved hypothetical protein K06887 K06887; uncharacterized protein D PAU_00920 conserved hypothetical protein K06887 K06887; uncharacterized protein D PAU_01802 conserved hypothetical protein K06889 K06889; uncharacterized protein D PAU_02930 ybhL; inner membrane protein ybhl K06890 K06890; uncharacterized protein D PAU_02595 conserved hypothetical protein K06893 K06893; uncharacterized protein D PAU_02105 phage baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D PAU_00019 phage baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D PAU_02240 similar to base plate protein gp25 of bacteriophage K06903 W; Bacteriophage baseplate protein W D PAU_03345 Phage baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D PAU_04283 phage baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D PAU_02797 afp9; conserved hypothetical protein K06903 W; Bacteriophage baseplate protein W D PAU_02001 conserved hypothetical protein K06903 W; Bacteriophage baseplate protein W D PAU_00007 putative phage regulator K06905 D; Bacteriophage probable baseplate hub protein D PAU_00008 putative tail fiber protein of prophage K06906 gpU; phage tail protein D PAU_01995 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_00012 probable major tail sheath protein K06907 FI; Bacteriophage tail sheath protein D PAU_02246 phage tail sheath protein fi-like K06907 FI; Bacteriophage tail sheath protein D PAU_04272 probable major tail sheath protein K06907 FI; Bacteriophage tail sheath protein D PAU_02791 afp2; conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_03352 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_03351 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_01994 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_02111 Phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein D PAU_01996 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_02110 Phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein D PAU_02792 afp3; conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_02793 afp4; conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_03350 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D PAU_02245 phage tail sheath protein, putative K06907 FI; Bacteriophage tail sheath protein D PAU_00011 putative tail fiber component of prophage K06908 FII; Bacteriophage tail tube protein D PAU_04271 putative tail fiber component of prophage K06908 FII; Bacteriophage tail tube protein D PAU_01953 ycjX; conserved hypothetical protein K06918 K06918; uncharacterized protein D PAU_02738 conserved hypothetical protein K06929 K06929; uncharacterized protein D PAU_01933 conserved hypothetical protein K06938 K06938; uncharacterized protein D PAU_03963 conserved hypothetical protein K06946 K06946; uncharacterized protein D PAU_01856 ydjN; similar to proton/sodium-glutamate symport protein K06956 K06956; uncharacterized protein D PAU_00469 conserved hypothetical protein K06995 K06995; uncharacterized protein D PAU_03528 yqiA; Hypothetical Protein K07000 K07000; uncharacterized protein D PAU_01662 yejM; putative inner membrane protein yejm K07014 K07014; uncharacterized protein D PAU_00310 yheT; conserved hypothetical protein K07019 K07019; uncharacterized protein D PAU_00542 yaaH; hypothetical membrane protein yaah K07034 K07034; uncharacterized protein D PAU_00329 yheV; conserved hypothetical protein K07070 K07070; uncharacterized protein D PAU_01459 similar to putative sugar nucleotide epimerase yfch protein o escherichia coli K07071 K07071; uncharacterized protein D PAU_00437 conserved hypothetical protein K07074 K07074; uncharacterized protein D PAU_03896 conserved hypothetical protein K07090 K07090; uncharacterized protein D PAU_01428 putative permease (putative membrane protein) K07090 K07090; uncharacterized protein D PAU_01511 yfcA; inner membrane protein yfca K07090 K07090; uncharacterized protein D PAU_04059 ytfJ; conserved hypothetical protein K07109 K07109; uncharacterized protein D PAU_03638 conserved hypothetical Protein K07121 K07121; uncharacterized protein D PAU_03238 conserved hypothetical protein K07123 K07123; uncharacterized protein D PAU_02475 yecN; similar probable membrane protein yecn of escherichia coli K07136 K07136; uncharacterized protein D PAU_02754 conserved hypothetical protein K07140 K07140; MOSC domain-containing protein D PAU_02898 conserved hypothetical protein K07148 K07148; uncharacterized protein D PAU_04399 yidD; conserved hypothetical protein K08998 K08998; uncharacterized protein D PAU_03166 conserved hypothetical protein K09158 K09158; uncharacterized protein D PAU_02426 ycgN; conserved hypothetical protein K09160 K09160; uncharacterized protein D PAU_00385 conserved hypothetical protein K09702 K09702; uncharacterized protein D PAU_03392 conserved hypothetical protein K09706 K09706; uncharacterized protein D PAU_02817 ycaR; conserved hypothetical protein K09791 K09791; uncharacterized protein D PAU_03864 similar to putative periplasmic protein K09795 K09795; uncharacterized protein D PAU_04350 yibQ; conserved hypothetical protein K09798 K09798; uncharacterized protein D PAU_01271 yfjF; conserved hypothetical protein K09801 K09801; uncharacterized protein D PAU_01694 yeeX; conserved hypothetical protein K09802 K09802; uncharacterized protein D PAU_03972 conserved hypothetical protein K09805 K09805; uncharacterized protein D PAU_03971 conserved hypothetical protein K09805 K09805; uncharacterized protein D PAU_01149 yggE; conserved hypothetical protein K09807 K09807; uncharacterized protein D PAU_03623 conserved hypothetical Protein K09824 virK; uncharacterized protein D PAU_03250 Similar to putative exported protein K05952 K05952; uncharacterized protein D PAU_02749 ymbA; conserved hypothetical protein K09857 K09857; uncharacterized protein D PAU_00536 yaaA; conserved hypothetical protein K09861 K09861; uncharacterized protein D PAU_01124 yacG; upf0243 zinc-binding protein yacg K09862 K09862; uncharacterized protein D PAU_00402 yjaG; conserved hypothetical protein K09891 K09891; uncharacterized protein D PAU_00174 yihI; conserved hypothetical protein K09894 K09894; uncharacterized protein D PAU_01155 ygfB; conserved hypothetical protein K09895 K09895; uncharacterized protein D PAU_04167 conserved hypothetical protein K09897 K09897; uncharacterized protein D PAU_00309 yheU; conserved hypothetical protein K09898 K09898; uncharacterized protein D PAU_01514 yfbV; conserved hypothetical protein K09899 K09899; uncharacterized protein D PAU_02038 yciU; conserved hypothetical protein K09901 K09901; uncharacterized protein D PAU_02428 ycgL; hypothetical protein ycgl K09902 K09902; uncharacterized protein D PAU_01663 yejL; conserved hypothetical protein K09904 K09904; uncharacterized protein D PAU_02479 yecM; conserved hypothetical protein K09907 K09907; uncharacterized protein D PAU_03655 conserved hypothetical Protein K09908 K09908; uncharacterized protein D PAU_01143 yacL; conserved hypothetical protein K09910 K09910; uncharacterized protein D PAU_02745 ycbG; conserved hypothetical protein K09911 K09911; uncharacterized protein D PAU_01976 yeaC; conserved hypothetical protein K09916 K09916; uncharacterized protein D PAU_01842 yoaH; conserved hypothetical protein K09917 K09917; uncharacterized protein D PAU_04120 yigA; conserved hypothetical protein K09921 K09921; uncharacterized protein D PAU_03289 conserved hypothetical protein K09923 K09923; uncharacterized protein D PAU_00872 conserved hypothetical protein K09929 K09929; uncharacterized protein D PAU_00871 conserved hypothetical protein K09930 K09930; uncharacterized protein D PAU_01763 conserved hypothetical protein K09946 K09946; uncharacterized protein D PAU_01410 conserved hypothetical protein K09954 K09954; uncharacterized protein D PAU_02085 conserved hypothetical protein K09958 K09958; uncharacterized protein D PAU_03115 gene0061; conserved hypothetical protein K09960 K09960; uncharacterized protein D PAU_03588 gene0104; conserved hypothetical protein K09960 K09960; uncharacterized protein D PAU_03117 gene0063; Phage-related protein HI1409 K09961 K09961; uncharacterized protein D PAU_03586 gene0102; conserved hypothetical protein K09961 K09961; uncharacterized protein D PAU_00990 ybaP; conserved hypothetical protein K09973 K09973; uncharacterized protein D PAU_02418 ydbL; conserved hypothetical protein K09978 K09978; uncharacterized protein D PAU_04004 yhbP; conserved hypothetical protein K09979 K09979; uncharacterized protein D PAU_02171 yjfI; conserved hypothetical protein K09980 K09980; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 29, 2024