+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Paracoccidioides lutzii Pb01
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D PAAG_05419 rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D PAAG_07395 nucleolar protein NOP56 K14564 NOP56; nucleolar protein 56
D PAAG_05498 nucleolar protein NOP58 K14565 NOP58; nucleolar protein 58
D PAAG_00775 13 kDa ribonucleoprotein-associated protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
C Box H/ACA snoRNPs
D PAAG_12386 PAAG_07378; centromere/microtubule-binding protein cbf5 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D PAAG_05102 hypothetical protein K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D PAAG_04456 ribosomal protein L7Ae containing protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D PAAG_04203 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D PAAG_02199 hypothetical protein K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D PAAG_07532 U3 small nucleolar ribonucleoprotein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D PAAG_08667 U3 small nucleolar ribonucleoprotein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D PAAG_07495 U3 small nucleolar ribonucleoprotein Mpp10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D PAAG_03468 hypothetical protein K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D PAAG_12290 PAAG_06887; hypothetical protein K14545 RRP7; ribosomal RNA-processing protein 7
D PAAG_08881 periodic tryptophan protein K14558 PWP2; periodic tryptophan protein 2
D PAAG_04678 nucleolar complex protein K14766 NOP14; nucleolar protein 14
D PAAG_03025 Sas10/Utp3 family protein K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D PAAG_08375 U3 small nucleolar RNA-associated protein K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D PAAG_02611 hypothetical protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D PAAG_07918 hypothetical protein K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D PAAG_06236 U3 small nucleolar RNA-associated protein K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D PAAG_04640 U3 small nucleolar RNA-associated protein K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D PAAG_05404 hypothetical protein K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D PAAG_05662 DOM34-interacting protein K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D PAAG_00751 U3 small nucleolar RNA-associated protein K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D PAAG_00248 small nucleolar ribonucleoprotein complex subunit Utp14 K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D PAAG_03367 U3 small nucleolar RNA-associated protein K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D PAAG_00118 hypothetical protein K14770 BUD21; U3 small nucleolar RNA-associated protein 16
D PAAG_03304 WD domain-containing protein K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D PAAG_01014 U3 small nucleolar RNA-associated protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D PAAG_04837 CBF/Mak21 family K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D PAAG_01159 hypothetical protein K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D PAAG_11290 PAAG_01511; hypothetical protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D PAAG_08927 U3 small nucleolar RNA-associated protein K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D PAAG_05672 hypothetical protein K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D PAAG_01509 rRNA-processing protein FCF1 K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D PAAG_00375 hypothetical protein K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D PAAG_00174 hypothetical protein K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D PAAG_03964 ATP-dependent RNA helicase DBP4 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D PAAG_06977 ATP-dependent RNA helicase DBP7 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D PAAG_01932 DEAD-box ATP-dependent RNA helicase K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D PAAG_02076 ATP-dependent RNA helicase DBP8 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D PAAG_08550 ATP-dependent RNA helicase ROK1 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D PAAG_02403 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D PAAG_04629 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D PAAG_01056 ATP-dependent RNA helicase DQX1 K14781 DHR2; ATP-dependent RNA helicase DHR2 [EC:5.6.2.6]
D PAAG_07283 ATP-dependent RNA helicase FAL1 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D PAAG_11132 PAAG_00590; hypothetical protein K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D PAAG_12664 PAAG_08956; hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAAG_02260 RNA exonuclease K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D PAAG_05174 lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D PAAG_04743 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D PAAG_02831 casein kinase II subunit beta-2 K03115 CSNK2B; casein kinase II subunit beta
D PAAG_04396 casein kinase II subunit beta-1 K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D PAAG_11255 PAAG_01287; hypothetical protein K14782 AATF; protein AATF/BFR2
D PAAG_12121 PAAG_05896; hypothetical protein K14784 CMS1; protein CMS1
D PAAG_05978 nucleolar essential protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D PAAG_06584 hypothetical protein K14785 ESF2; ESF2/ABP1 family protein
D PAAG_08621 ribosome biogenesis protein Kri1 K14786 KRI1; protein KRI1
D PAAG_03690 ribosomal RNA assembly protein KRR1 K06961 KRR1; ribosomal RNA assembly protein
D PAAG_00933 multiple RNA-binding domain-containing protein K14787 MRD1; multiple RNA-binding domain-containing protein 1
D PAAG_05574 N-acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D PAAG_01733 28 kDa ribonucleoprotein K11294 NCL; nucleolin
D PAAG_01251 WD repeat-containing protein K14788 NOL10; ribosome biogenesis protein ENP2
D PAAG_12120 PAAG_05896; hypothetical protein K14789 NOP6; nucleolar protein 6
D PAAG_07209 hypothetical protein K14790 NOP9; nucleolar protein 9
D PAAG_00836 hypothetical protein K11135 PINX1; Pin2-interacting protein X1
D PAAG_05670 periodic tryptophan protein K14791 PWP1; periodic tryptophan protein 1
D PAAG_04758 RNA-3'-phosphate cyclase family protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D PAAG_03954 rRNA biogenesis protein RRP5 K14792 RRP5; rRNA biogenesis protein RRP5
D PAAG_00754 ribosomal RNA-processing protein K14793 RRP9; ribosomal RNA-processing protein 9
D PAAG_11042 PAAG_00077; hypothetical protein K14794 RRP12; ribosomal RNA-processing protein 12
D PAAG_03557 hypothetical protein K14795 RRP36; ribosomal RNA-processing protein 36
D PAAG_05398 hypothetical protein K14796 TMA23; nucleolar protein TMA23
D PAAG_05508 small nucleolar ribonucleoprotein complex subunit (SOF1) K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D PAAG_05125 casein kinase I K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D PAAG_00154 serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PAAG_02415 serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D PAAG_00994 dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D PAAG_00857 williams Beuren syndrome chromosome region 22 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D PAAG_01540 bystin K14797 ENP1; essential nuclear protein 1
D PAAG_00456 low-temperature viability protein ltv1 K14798 LTV1; protein LTV1
D PAAG_04204 RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1
D PAAG_00865 pre-rRNA-processing protein PNO1 K11884 PNO1; RNA-binding protein PNO1
D PAAG_04651 GTP-binding nuclear protein GSP1/Ran K07936 RAN; GTP-binding nuclear protein Ran
D PAAG_08695 POS9-activating factor FAP7 K18532 AK6; adenylate kinase [EC:2.7.4.3]
D PAAG_06235 ribosome biogenesis protein TSR1 K14799 TSR1; pre-rRNA-processing protein TSR1
D PAAG_01291 pre-rRNA-processing protein TSR2 K14800 TSR2; pre-rRNA-processing protein TSR2
D PAAG_07853 RLI and DUF367 domain-containing protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D PAAG_07419 hypothetical protein K14801 TSR4; pre-rRNA-processing protein TSR4
D PAAG_00302 exportin-1 K14290 XPO1; exportin-1
D PAAG_05338 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1
D PAAG_05300 importin subunit beta-2 K18752 TNPO1; transportin-1
D PAAG_01278 karyopherin Kap123 K20221 IPO4; importin-4
D PAAG_12448 hypothetical protein K20222 IPO5; importin-5
D PAAG_01345 importin-8 K20223 IPO7; importin-7
D PAAG_11775 PAAG_03934; hypothetical protein K20224 IPO9; importin-9
C Other pre-40S particles
D PAAG_12472 PAAG_07970; hypothetical protein K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D PAAG_00772 hypothetical protein K03245 EIF3J; translation initiation factor 3 subunit J
D PAAG_00371 phosphatase 2C Ptc3 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16]
D PAAG_02865 translation initiation factor RLI1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D PAAG_06484 ATP-dependent RNA helicase DBP2 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PAAG_06977 ATP-dependent RNA helicase DBP7 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D PAAG_08150 ATP-dependent RNA helicase MAK5 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D PAAG_05480 ATP-dependent RNA helicase drs1 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D PAAG_02325 ATP-dependent RNA helicase dbp7 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D PAAG_09094 ATP-dependent RNA helicase dbp6 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D PAAG_03969 ATP-dependent RNA helicase DBP10 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D PAAG_02108 ATP-dependent rRNA helicase SPB4 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D PAAG_00144 ATP-dependent RNA helicase DBP9 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D PAAG_00292 ATP-dependent RNA helicase DBP3 K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7]
D PAAG_07594 ATP-dependent RNA helicase DOB1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D PAAG_02893 GTPase Grn1 K14538 NUG1; nuclear GTP-binding protein
D PAAG_03259 nucleolar GTP-binding protein K14537 NUG2; nuclear GTP-binding protein
D PAAG_03672 nucleolar GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein
D PAAG_00455 large-subunit GTPase K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
D PAAG_02582 elongation factor 2 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D PAAG_11414 PAAG_02011; hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PAAG_01653 RNA exonuclease K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D PAAG_04426 RNA exonuclease K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D PAAG_08876 5'-3' exoribonuclease K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D PAAG_07103 5'-3' exoribonuclease K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D RNase MRP
E PAAG_12172 hypothetical protein K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E PAAG_02342 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E PAAG_05149 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E PAAG_07443 hypothetical protein K14526 POP7; ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5]
E PAAG_00466 hypothetical protein K14528 POP8; ribonuclease P/MRP protein subunit POP8 [EC:3.1.26.5]
E PAAG_04744 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E PAAG_02794 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
E PAAG_12560 PAAG_08444; hypothetical protein K14532 RMP1; ribonuclease MRP protein subunit RMP1
C Kinases
D PAAG_05125 casein kinase I K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D PAAG_07414 RNA processing protein Grc3 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D PAAG_04904 ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D PAAG_08921 hypothetical protein K09506 DNAJA5; DnaJ homolog subfamily A member 5
D PAAG_04958 eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D PAAG_08003 hsp70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PAAG_07775 heat shock protein SSB1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PAAG_02576 mRNA turnover protein K14815 MRT4; mRNA turnover protein 4
D PAAG_06583 nonsense-mediated mRNA decay protein K07562 NMD3; 60S ribosomal export protein NMD3
D PAAG_00803 mRNA export factor mex67 K14284 NXF; nuclear RNA export factor
D PAAG_00714 nuclear transport factor 2 domain-containing protein K14285 NXT1_2; NTF2-related export protein 1/2
D PAAG_04651 GTP-binding nuclear protein GSP1/Ran K07936 RAN; GTP-binding nuclear protein Ran
D PAAG_01192 pre-60S factor REI1 K14816 REI1; pre-60S factor REI1
D PAAG_03545 hypothetical protein K14817 LOC1; 60S ribosomal subunit assembly/export protein LOC1
D PAAG_03511 hypothetical protein K14574 SDO1; ribosome maturation protein SDO1
D PAAG_01498 AAA family ATPase K14575 AFG2; AAA family ATPase
D PAAG_04886 ribosome assembly protein SQT1 K14818 SQT1; ribosome assembly protein SQT1
D PAAG_00302 exportin-1 K14290 XPO1; exportin-1
D PAAG_05338 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1
D PAAG_05300 importin subunit beta-2 K18752 TNPO1; transportin-1
D PAAG_01278 karyopherin Kap123 K20221 IPO4; importin-4
D PAAG_12448 hypothetical protein K20222 IPO5; importin-5
D PAAG_01345 importin-8 K20223 IPO7; importin-7
D PAAG_11775 PAAG_03934; hypothetical protein K20224 IPO9; importin-9
D PAAG_07579 tyrosine-protein phosphatase YVH1 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D PAAG_00575 pre-rRNA-processing protein ipi1 K14827 IPI1; pre-rRNA-processing protein IPI1
D PAAG_05938 WD repeat-containing protein K14829 IPI3; pre-rRNA-processing protein IPI3
D PAAG_02547 hypothetical protein K16912 LAS1; ribosomal biogenesis protein LAS1
C Ribosome quality control proteins
D PAAG_02195 hypothetical protein K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D PAAG_07835 Nulp1-pending protein K24970 TCF25; transcription factor 25
D PAAG_11197 PAAG_01047; hypothetical protein K24971 NEMF; nuclear export mediator factor NEMF
D PAAG_05518 cell division cycle protein K13525 VCP; transitional endoplasmic reticulum ATPase
D PAAG_12075 PAAG_05643; nuclear protein localization protein 4 K14015 NPLOC4; nuclear protein localization protein 4
D PAAG_08119 ubiquitin fusion degradation protein K14016 UFD1; ubiquitin fusion degradation protein 1
D PAAG_07307 ankyrin repeat-containing protein K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D PAAG_08110 ribosome biogenesis protein BRX1 K14820 BRX1; ribosome biogenesis protein BRX1
D PAAG_05047 hypothetical protein K14821 BUD20; bud site selection protein 20
D PAAG_01753 Nop16-like protein CgrA K14822 CGR1; rRNA-processing protein CGR1
D PAAG_02486 hypothetical protein K14823 EBP2; rRNA-processing protein EBP2
D PAAG_00362 eukaryotic ribosome biogenesis protein K14824 ERB1; ribosome biogenesis protein ERB1
D PAAG_01117 FK506-binding protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8]
D PAAG_00748 hypothetical protein K14830 MAK11; protein MAK11
D PAAG_04594 hypothetical protein K14831 MAK16; protein MAK16
D PAAG_03047 CCAAT-box-binding transcription factor K14832 MAK21; ribosome biogenesis protein MAK21
D PAAG_00114 midasin K14572 MDN1; midasin
D PAAG_06546 60S ribosome subunit biogenesis protein NIP7 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D PAAG_08546 nucleolar complex protein K14833 NOC2; nucleolar complex protein 2
D PAAG_06547 nucleolar complex-associated protein K14834 NOC3; nucleolar complex protein 3
D PAAG_08478 Nop16-like protein NOP2 K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D PAAG_04390 nucleolar protein K14573 NOP4; nucleolar protein 4
D PAAG_04711 nucleolar protein K14837 NOP12; nucleolar protein 12
D PAAG_04379 hypothetical protein K14838 NOP15; nucleolar protein 15
D PAAG_03805 constituent of 66S pre-ribosomal particles K14839 NOP16; nucleolar protein 16
D PAAG_02261 p60 domain-containing protein K14840 NOP53; nucleolar protein 53
D PAAG_00697 TGF-beta-inducible nuclear protein K14842 NSA2; ribosome biogenesis protein NSA2
D PAAG_03173 pescadillo development protein K14843 PES1; pescadillo
D PAAG_02883 hypothetical protein K14844 PUF6; pumilio homology domain family member 6
D PAAG_05670 periodic tryptophan protein K14791 PWP1; periodic tryptophan protein 1
D PAAG_11663 PAAG_03637; hypothetical protein K14845 RAI1; RAT1-interacting protein
D PAAG_00460 hypothetical protein K14828 RIX1; pre-rRNA-processing protein RIX1
D PAAG_00363 ribosome biogenesis ATPase RIX7 K14571 RIX7; ribosome biogenesis ATPase
D PAAG_07348 brix domain-containing protein K14846 RPF1; ribosome production factor 1
D PAAG_04747 ribosome biogenesis protein RPF2 K14847 RPF2; ribosome production factor 2
D PAAG_05522 ribosome biogenesis protein K14848 RRB1; ribosome assembly protein RRB1
D PAAG_03006 hypothetical protein K14849 RRP1; ribosomal RNA-processing protein 1
D PAAG_03686 hypothetical protein K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D PAAG_11042 PAAG_00077; hypothetical protein K14794 RRP12; ribosomal RNA-processing protein 12
D PAAG_08972 hypothetical protein K14851 RRP17; ribosomal RNA-processing protein 17
D PAAG_08969 regulator of ribosome biosynthesis K14852 RRS1; regulator of ribosome biosynthesis
D PAAG_06089 WD repeat-containing protein K14855 RSA4; ribosome assembly protein 4
D PAAG_05485 SDA1 domain containing protein K14856 SDA1; protein SDA1
D PAAG_02456 AdoMet-dependent rRNA methyltransferase spb1 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D PAAG_01933 ribosome biogenesis protein SSF2 K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D PAAG_03310 hypothetical protein K14860 TMA16; translation machinery-associated protein 16
D PAAG_11460 PAAG_02274; hypothetical protein K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D PAAG_00518 hypothetical protein K14862 URB2; nucleolar pre-ribosomal-associated protein 2
D PAAG_00741 microtubule-associated protein YTM1 K14863 WDR12; ribosome biogenesis protein
D PAAG_00978 hypothetical protein K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C PAAG_05197 hypothetical protein K15262 BCP1; protein BCP1
C PAAG_06128 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein
C PAAG_08804 hypothetical protein K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C PAAG_06966 RNA methyltransferase K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
C PAAG_07384 hypothetical protein K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C PAAG_07376 hypothetical protein K19307 BMT5; 25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]
C PAAG_04463 hypothetical protein K19308 BMT6; 25S rRNA (uracil2843-N3)-methyltransferase [EC:2.1.1.312]
C PAAG_06574 curved DNA-binding protein 42 kDa protein K26736 PA2G4; ERBB-3 binding protein
C PAAG_04061 mitochondrial GTPase K19828 MTG1; mitochondrial GTPase 1
C PAAG_11436 PAAG_02164; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C PAAG_11972 hypothetical protein K19829 GEP3; genetic interactor of prohibitins 3, mitochondrial
C PAAG_08370 hypothetical protein K15267 MTEF1; mitochondrial transcription factor 1
C PAAG_04699 hypothetical protein K18803 HPM1; protein-histidine N-methyltransferase [EC:2.1.1.85]
C PAAG_05903 SET domain containing protein K27349 RKM2; ribosomal lysine N-methyltransferase 2 [EC:2.1.1.-]
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D PAAG_07395 nucleolar protein NOP56 K14564 NOP56; nucleolar protein 56
D PAAG_04998 60S ribosomal protein L8-B K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D PAAG_12386 PAAG_07378; centromere/microtubule-binding protein cbf5 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D PAAG_04203 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
B ribosomal protein modification factors
B rRNA processing factors
C PAAG_12664 PAAG_08956; hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C PAAG_11436 PAAG_02164; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C PAAG_01046 translation initiation protein Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C PAAG_04454 GTP-binding protein K06942 ychF; ribosome-binding ATPase
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024