+D
#
Spliceosome - Paracoccidioides lutzii Pb01
%
!
ACommon components
B Common spliceosomal components
C Cap binding complex
D PAAG_03652 cap binding protein K12882 NCBP1; nuclear cap-binding protein subunit 1
D PAAG_07506 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C hnRNP proteins
C SR proteins
C General mRNP proteins
D PAAG_05322 RNA-binding protein K13091 RBM23_39; RNA-binding protein 23/39
#
AComplex A
B U1 snRNP components
C Sm proteins
D PAAG_00723 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PAAG_01062 small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PAAG_02537 small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PAAG_08223 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PAAG_03710 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PAAG_04790 small nuclear ribonucleoprotein SmG K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D PAAG_02577 hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D PAAG_06974 hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D PAAG_06484 ATP-dependent RNA helicase DBP2 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PAAG_02866 hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
B U2 snRNP components
C Sm proteins
D PAAG_00723 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PAAG_01062 small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PAAG_02537 small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PAAG_08223 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PAAG_03710 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PAAG_04790 small nuclear ribonucleoprotein SmG K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D PAAG_02329 U2 small nuclear ribonucleoprotein A K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PAAG_02437 U2 small nuclear ribonucleoprotein B K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PAAG_00874 RNA binding domain-containing protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PAAG_05909 pre-mRNA-splicing factor sap114 K12825 SF3A1; splicing factor 3A subunit 1
D PAAG_02756 splicing factor 3a K12826 SF3A2; splicing factor 3A subunit 2
D PAAG_07282 splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D PAAG_05722 U2 snRNP component prp10 K12828 SF3B1; splicing factor 3B subunit 1
D PAAG_08958 splicing factor 3b K12829 SF3B2; splicing factor 3B subunit 2
D PAAG_04637 pre-mRNA-splicing factor rse1 K12830 SF3B3; splicing factor 3B subunit 3
D PAAG_03662 spliceosome associated protein K12831 SF3B4; splicing factor 3B subunit 4
D PAAG_11370 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PAAG_01012 pre-mRNA branch site protein p14 K12833 SF3B14; pre-mRNA branch site protein p14
C U2 related factors
D PAAG_06823 splicing factor U2AF 23 kDa subunit K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PAAG_05711 splicing factor U2AF 50 kDa subunit K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D PAAG_02403 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D PAAG_02840 pre-mRNA-processing ATP-dependent RNA helicase prp5 K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D PAAG_07666 hypothetical protein K12840 RBM17; splicing factor 45
D PAAG_01285 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D PAAG_01855 hypothetical protein K12842 SR140; U2-associated protein SR140
B Other components
C Complex A specific factors
D PAAG_05147 mitotic checkpoint protein BUB3 K02180 BUB3; cell cycle arrest protein BUB3
D PAAG_06500 cell division protein kinase K08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]
D PAAG_03030 splicing factor U2AF-associated protein K13093 HTATSF1; HIV Tat-specific factor 1
D PAAG_02078 branchpoint-bridging protein K13095 SF1; splicing factor 1
#
AComplex B
B U1 snRNP components
C Sm proteins
D PAAG_00723 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PAAG_01062 small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PAAG_02537 small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PAAG_08223 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PAAG_03710 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PAAG_04790 small nuclear ribonucleoprotein SmG K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D PAAG_02577 hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D PAAG_06974 hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D PAAG_06484 ATP-dependent RNA helicase DBP2 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PAAG_02866 hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
B U2 snRNP components
C Sm proteins
D PAAG_00723 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PAAG_01062 small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PAAG_02537 small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PAAG_08223 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PAAG_03710 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PAAG_04790 small nuclear ribonucleoprotein SmG K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D PAAG_02329 U2 small nuclear ribonucleoprotein A K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PAAG_02437 U2 small nuclear ribonucleoprotein B K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PAAG_00874 RNA binding domain-containing protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PAAG_05909 pre-mRNA-splicing factor sap114 K12825 SF3A1; splicing factor 3A subunit 1
D PAAG_02756 splicing factor 3a K12826 SF3A2; splicing factor 3A subunit 2
D PAAG_07282 splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D PAAG_05722 U2 snRNP component prp10 K12828 SF3B1; splicing factor 3B subunit 1
D PAAG_08958 splicing factor 3b K12829 SF3B2; splicing factor 3B subunit 2
D PAAG_04637 pre-mRNA-splicing factor rse1 K12830 SF3B3; splicing factor 3B subunit 3
D PAAG_03662 spliceosome associated protein K12831 SF3B4; splicing factor 3B subunit 4
D PAAG_11370 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PAAG_01012 pre-mRNA branch site protein p14 K12833 SF3B14; pre-mRNA branch site protein p14
C U2 related factors
D PAAG_06823 splicing factor U2AF 23 kDa subunit K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PAAG_05711 splicing factor U2AF 50 kDa subunit K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D PAAG_02403 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D PAAG_02840 pre-mRNA-processing ATP-dependent RNA helicase prp5 K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D PAAG_07666 hypothetical protein K12840 RBM17; splicing factor 45
D PAAG_01285 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D PAAG_01855 hypothetical protein K12842 SR140; U2-associated protein SR140
B U4/U6.U5 tri-snRNP components
C Sm proteins
D PAAG_00723 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PAAG_01062 small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PAAG_02537 small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PAAG_08223 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PAAG_03710 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PAAG_04790 small nuclear ribonucleoprotein SmG K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D PAAG_01630 small nuclear ribonucleoprotein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
D PAAG_02522 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
D PAAG_00101 small nuclear ribonucleoprotein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
D PAAG_08979 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
D PAAG_00845 LSM domain-containing protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
D PAAG_05386 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
D PAAG_12408 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
C U4/U6 snRNP specific factors
D PAAG_02198 hypothetical protein K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3
D PAAG_04767 U4/U6 small nuclear ribonucleoprotein PRP4 K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4
D PAAG_01778 peptidyl-prolyl cis-trans isomerase H K09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
D PAAG_02854 pre-mRNA-processing factor 31 K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31
D PAAG_00775 13 kDa ribonucleoprotein-associated protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D PAAG_03377 hypothetical protein K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3
C U5 snRNP specific factors
D PAAG_07785 116 kDa U5 small nuclear ribonucleoprotein component K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D PAAG_00995 pre-mRNA-splicing factor prp1 K12855 PRPF6; pre-mRNA-processing factor 6
D PAAG_06793 pre-mRNA-processing-splicing factor 8 K12856 PRPF8; pre-mRNA-processing factor 8
D PAAG_06897 WD repeat-containing protein K12857 SNRNP40; Prp8 binding protein
D PAAG_11921 PAAG_04753; hypothetical protein K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D PAAG_03278 pre-mRNA-splicing ATP-dependent RNA helicase PRP28 K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
D PAAG_00727 mitosis protein dim1 K12859 TXNL4A; U5 snRNP protein, DIM1 family
D PAAG_08118 hypothetical protein K13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2
C U4/U6.U5 tri-snRNP specific factors
D PAAG_02602 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
D PAAG_11168 hypothetical protein K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2
D PAAG_11899 PAAG_04603; hypothetical protein K12846 SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3
C U4/U6.U5 tri-snRNP related factors
D PAAG_02183 hypothetical protein K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D PAAG_04130 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D PAAG_12074 PAAG_05631; pre-mRNA-splicing factor cwc22 K13100 CWC22; pre-mRNA-splicing factor CWC22
D PAAG_12576 PAAG_08524; hypothetical protein K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D PAAG_02588 peptidyl-prolyl cis-trans isomerase cyp8 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D PAAG_07594 ATP-dependent RNA helicase DOB1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
B Other components
C Prp19 complex
D PAAG_02580 cell cycle control protein cwf8 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D PAAG_02262 pre-mRNA-splicing factor cef1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D PAAG_07883 BCAS2 domain-containing protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D PAAG_02908 pre-mRNA-splicing factor prp46 K12862 PLRG1; pleiotropic regulator 1
D PAAG_07966 pre-mRNA-splicing factor cwc15 K12863 CWC15; protein CWC15
D PAAG_06853 DNA-directed RNA polymerase II 138 kDa polypeptide K12864 CTNNBL1; beta-catenin-like protein 1
D PAAG_08003 hsp70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PAAG_07775 heat shock protein SSB1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D PAAG_08882 pre-mRNA-processing protein K06063 SNW1; SNW domain-containing protein 1
D PAAG_02435 pre-mRNA-splicing factor syf1 K12867 SYF1; pre-mRNA-splicing factor SYF1
D PAAG_08280 pre-mRNA-splicing factor syf2 K12868 SYF2; pre-mRNA-splicing factor SYF2
D PAAG_02853 pre-mRNA-splicing factor CLF1 K12869 CRN; crooked neck
D PAAG_06334 intron-binding protein aquarius K12874 AQR; intron-binding protein aquarius
D PAAG_07387 cell cycle control protein cwf14 K12873 BUD31; bud site selection protein 31
D PAAG_00380 hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D PAAG_04062 pre-mRNA-splicing factor isy1 K12870 ISY1; pre-mRNA-splicing factor ISY1
D PAAG_06168 peptidyl-prolyl cis-trans isomerase cypE K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D PAAG_01574 pre-mRNA-splicing factor slt11 K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
D PAAG_00476 pre-mRNA-splicing factor cwc2 K27398 CWC2; pre-mRNA-splicing factor CWC2
C RES complex
D PAAG_01606 pre-mRNA-splicing factor cwc26 K13106 BUD13; pre-mRNA-splicing factor CWC26
D PAAG_04040 RNA binding domain-containing protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D PAAG_01977 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C Complex B specific factors
D PAAG_02543 microfibril-associated protein K13110 MFAP1; microfibrillar-associated protein 1
#
AComplex C
B U2 snRNP components
C Sm proteins
D PAAG_00723 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PAAG_01062 small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PAAG_02537 small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PAAG_08223 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PAAG_03710 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PAAG_04790 small nuclear ribonucleoprotein SmG K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D PAAG_01630 small nuclear ribonucleoprotein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
D PAAG_02522 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
C U2 SnRNP specific factors
D PAAG_02329 U2 small nuclear ribonucleoprotein A K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PAAG_02437 U2 small nuclear ribonucleoprotein B K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PAAG_00874 RNA binding domain-containing protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PAAG_05909 pre-mRNA-splicing factor sap114 K12825 SF3A1; splicing factor 3A subunit 1
D PAAG_02756 splicing factor 3a K12826 SF3A2; splicing factor 3A subunit 2
D PAAG_07282 splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D PAAG_05722 U2 snRNP component prp10 K12828 SF3B1; splicing factor 3B subunit 1
D PAAG_08958 splicing factor 3b K12829 SF3B2; splicing factor 3B subunit 2
D PAAG_04637 pre-mRNA-splicing factor rse1 K12830 SF3B3; splicing factor 3B subunit 3
D PAAG_03662 spliceosome associated protein K12831 SF3B4; splicing factor 3B subunit 4
D PAAG_11370 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PAAG_01012 pre-mRNA branch site protein p14 K12833 SF3B14; pre-mRNA branch site protein p14
B U4/U6.U5 tri-snRNP components
C Sm proteins
D PAAG_00723 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PAAG_01062 small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PAAG_02537 small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PAAG_08223 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PAAG_03710 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PAAG_04790 small nuclear ribonucleoprotein SmG K11099 SNRPG; small nuclear ribonucleoprotein G
C U5 SnRNP specific factors
D PAAG_07785 116 kDa U5 small nuclear ribonucleoprotein component K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D PAAG_11921 PAAG_04753; hypothetical protein K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D PAAG_00995 pre-mRNA-splicing factor prp1 K12855 PRPF6; pre-mRNA-processing factor 6
D PAAG_06793 pre-mRNA-processing-splicing factor 8 K12856 PRPF8; pre-mRNA-processing factor 8
D PAAG_06897 WD repeat-containing protein K12857 SNRNP40; Prp8 binding protein
D PAAG_03278 pre-mRNA-splicing ATP-dependent RNA helicase PRP28 K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
C U4/U6.U5 tri-SnRNP specific factors
D PAAG_02602 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
C U4/U6.U5 tri-SnRNP related factors
D PAAG_02183 hypothetical protein K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D PAAG_04130 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D PAAG_12074 PAAG_05631; pre-mRNA-splicing factor cwc22 K13100 CWC22; pre-mRNA-splicing factor CWC22
D PAAG_12576 PAAG_08524; hypothetical protein K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D PAAG_02588 peptidyl-prolyl cis-trans isomerase cyp8 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D PAAG_07594 ATP-dependent RNA helicase DOB1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D PAAG_02403 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D PAAG_02724 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
B Other components
C Prp19-CDC5 complex
D PAAG_02580 cell cycle control protein cwf8 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D PAAG_02262 pre-mRNA-splicing factor cef1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D PAAG_07883 BCAS2 domain-containing protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D PAAG_06853 DNA-directed RNA polymerase II 138 kDa polypeptide K12864 CTNNBL1; beta-catenin-like protein 1
D PAAG_07966 pre-mRNA-splicing factor cwc15 K12863 CWC15; protein CWC15
D PAAG_02908 pre-mRNA-splicing factor prp46 K12862 PLRG1; pleiotropic regulator 1
D PAAG_08003 hsp70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PAAG_07775 heat shock protein SSB1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D PAAG_08882 pre-mRNA-processing protein K06063 SNW1; SNW domain-containing protein 1
D PAAG_02435 pre-mRNA-splicing factor syf1 K12867 SYF1; pre-mRNA-splicing factor SYF1
D PAAG_08280 pre-mRNA-splicing factor syf2 K12868 SYF2; pre-mRNA-splicing factor SYF2
D PAAG_02853 pre-mRNA-splicing factor CLF1 K12869 CRN; crooked neck
D PAAG_06334 intron-binding protein aquarius K12874 AQR; intron-binding protein aquarius
D PAAG_07387 cell cycle control protein cwf14 K12873 BUD31; bud site selection protein 31
D PAAG_00380 hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D PAAG_04062 pre-mRNA-splicing factor isy1 K12870 ISY1; pre-mRNA-splicing factor ISY1
D PAAG_06168 peptidyl-prolyl cis-trans isomerase cypE K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D PAAG_01574 pre-mRNA-splicing factor slt11 K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
C RES complex
D PAAG_01606 pre-mRNA-splicing factor cwc26 K13106 BUD13; pre-mRNA-splicing factor CWC26
D PAAG_04040 RNA binding domain-containing protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D PAAG_01977 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C EJC/TREX
D PAAG_04511 ATP-dependent RNA helicase SUB2 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D PAAG_07283 ATP-dependent RNA helicase FAL1 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D PAAG_01990 hypothetical protein K25178 CCDC174; coiled-coil domain-containing protein 174
D PAAG_03003 hypothetical protein K12877 MAGOH; protein mago nashi
D PAAG_06761 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A
D PAAG_06335 nuclear matrix protein K12878 THOC1; THO complex subunit 1
D PAAG_04920 nucleoside-diphosphate-sugar epimerase K12879 THOC2; THO complex subunit 2
D PAAG_02793 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
D PAAG_08680 RNA binding domain-containing protein K12881 THOC4; THO complex subunit 4
D PAAG_05224 hypothetical protein K12881 THOC4; THO complex subunit 4
C Step II factors
D PAAG_06400 pre-mRNA-processing factor 17 K12816 CDC40; pre-mRNA-processing factor 17
D PAAG_09112 potassium channel regulatory factor K12817 PRPF18; pre-mRNA-splicing factor 18
D PAAG_05866 pre-mRNA-splicing factor slu7 K12819 SLU7; pre-mRNA-processing factor SLU7
D PAAG_02275 pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D PAAG_12089 PAAG_05748; hypothetical protein K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
C PPlases
D PAAG_06884 RNA binding protein K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]
D PAAG_06067 peptidylprolyl isomerase domain and WD repeat-containing protein K12736 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
D PAAG_08458 peptidyl-prolyl isomerase cwc27 K12737 SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]
C hnRNP proteins
C Complex C specific factors
D PAAG_01300 coiled-coil domain-containing protein K13115 CCDC130; coiled-coil domain-containing protein 130
D PAAG_00366 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 K13117 DHX35; ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
D PAAG_07366 hypothetical protein K13118 DGCR14; protein DGCR14
D PAAG_05140 XAP5 domain-containing protein K13119 FAM50; protein FAM50
D PAAG_04469 hypothetical protein K13120 FAM32A; protein FAM32A
D PAAG_00964 hypothetical protein K13122 FRG1; protein FRG1
D PAAG_03009 hypothetical protein K13123 GPATCH1; G patch domain-containing protein 1
D PAAG_08879 WD repeat-containing protein K13124 MORG1; mitogen-activated protein kinase organizer 1
D PAAG_09071 hypothetical protein K13125 NOSIP; nitric oxide synthase-interacting protein
D PAAG_00244 polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein
D PAAG_04947 pre-mRNA-splicing factor cwc24 K13127 RNF113A; RING finger protein 113A
D PAAG_02724 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
D PAAG_06790 hypothetical protein K25058 CACTIN; cactin
D PAAG_11973 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
D PAAG_12349 PAAG_07164; hypothetical protein K26159 PRKRIP1; PRKR-interacting protein 1
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AOther splicing related proteins
B Proteins involved in snRNP biogenesis
C SMN complex factors
D PAAG_08682 WD repeat-containing protein K13137 STRAP; serine-threonine kinase receptor-associated protein
C Integrator complex
C Other proteins involved in snRNP biogenesis
D PAAG_01285 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D PAAG_04801 hypothetical protein K23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
D PAAG_04178 hypothetical protein K05019 CLNS1A; chloride channel, nucleotide-sensitive, 1A
D PAAG_01113 trimethylguanosine synthase K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]
B Minor spliceosome components
C Minor spliceosome specific factors
C Minor spliceosome associated proteins
D PAAG_06557 cript family protein K24826 CRIPT; cysteine-rich PDZ-binding protein
D PAAG_02588 peptidyl-prolyl cis-trans isomerase cyp8 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
B Spliceosome associated proteins (SAPs)
C hnRNP proteins
C SR proteins
C SR-related proteins
D PAAG_11154 PAAG_00693; hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1
C TREX complex
D PAAG_06335 nuclear matrix protein K12878 THOC1; THO complex subunit 1
D PAAG_04920 nucleoside-diphosphate-sugar epimerase K12879 THOC2; THO complex subunit 2
D PAAG_02793 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
D PAAG_08680 RNA binding domain-containing protein K12881 THOC4; THO complex subunit 4
D PAAG_05224 hypothetical protein K12881 THOC4; THO complex subunit 4
D PAAG_12206 PAAG_06360; hypothetical protein K13174 THOC5; THO complex subunit 5
D PAAG_04511 ATP-dependent RNA helicase SUB2 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
C RNA helicase-like proteins
D PAAG_03855 ATP-dependent RNA helicase DBP2 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D PAAG_00734 ATP-dependent RNA helicase DED1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D PAAG_06977 ATP-dependent RNA helicase DBP7 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D PAAG_05480 ATP-dependent RNA helicase drs1 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
C RNA binding proteins (RBPs)
D PAAG_02068 hypothetical protein K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D PAAG_02940 TIA1 cytotoxic granule-associated RNA binding protein K13201 TIA1; nucleolysin TIA-1/TIAR
D PAAG_02675 hypothetical protein K20100 YTHDC1; YTH domain-containing protein 1
C Other SAPs
D PAAG_01434 AAR2 family protein K13205 AAR2; A1 cistron-splicing factor AAR2
D PAAG_03963 DnaJ domain-containing protein K09528 DNAJC8; DnaJ homolog subfamily C member 8
D PAAG_02643 hypothetical protein K13210 FUBP; far upstream element-binding protein
D PAAG_08593 serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PAAG_00783 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PAAG_02402 arginine N-methyltransferase skb1 K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]
D PAAG_01864 serine/threonine-protein kinase prp4 K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
D PAAG_03277 pre-mRNA-processing factor 39 K13217 PRPF39; pre-mRNA-processing factor 39
D PAAG_08769 ATP-dependent DNA helicase 2 subunit 1 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
D PAAG_00492 cyclin domain-containing protein K23966 CCNL; cyclin L
D PAAG_05174 lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
D PAAG_01157 cwfJ domain-containing protein K24939 CWF19L1; CWF19-like protein 1
D PAAG_02751 hypothetical protein K24940 CWF19L2; CWF19-like protein 2
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ASplicing related RNAs
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 18, 2024