+D GENES KO #

  KEGG Orthology (KO) - Psychrobacter cryohalolentis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pcr00010] D Pcryo_0118 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pcryo_0530 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pcryo_0092 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Pcryo_0683 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pcryo_0070 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Pcryo_1684 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pcryo_1842 Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pcryo_0681 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Pcryo_0673 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Pcryo_1870 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pcryo_1034 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Pcryo_1050 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Pcryo_1051 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_1939 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pcryo_2398 Alcohol dehydrogenase GroES-like protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_1844 Aldehyde dehydrogenase (NAD+) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Pcryo_0203 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_0838 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_0569 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:pcr00020] D Pcryo_0106 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Pcryo_2384 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Pcryo_0746 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pcryo_0315 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Pcryo_0314 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Pcryo_0111 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Pcryo_0112 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0115 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Pcryo_0114 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Pcryo_1227 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Pcryo_0109 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Pcryo_0110 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Pcryo_0107 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Pcryo_0108 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Pcryo_1894 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Pcryo_2044 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pcryo_1050 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Pcryo_1051 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:pcr00030] D Pcryo_0118 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pcryo_1994 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Pcryo_1849 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pcryo_1203 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Pcryo_1462 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Pcryo_0569 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Pcryo_0185 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Pcryo_0092 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Pcryo_0683 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pcryo_0530 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:pcr00040] D Pcryo_0119 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Pcryo_0117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pcryo_1994 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Pcryo_1815 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:pcr00051] D Pcryo_0120 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Pcryo_0569 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Pcryo_2501 HAD-superfamily hydrolase YedP K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D Pcryo_0530 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pcryo_0092 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Pcryo_0683 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pcryo_0070 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:pcr00052] D Pcryo_0116 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Pcryo_0617 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Pcryo_0117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pcryo_0569 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism [PATH:pcr00053] D Pcryo_0119 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:pcr00500] D Pcryo_0117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pcryo_1802 trehalose 6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Pcryo_1803 trehalose 6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D Pcryo_0569 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Pcryo_0118 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pcr00520] D Pcryo_0308 glycoside hydrolase, family 3-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Pcryo_2397 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Pcryo_1006 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Pcryo_2396 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Pcryo_2270 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D Pcryo_0131 HAD-superfamily hydrolase subfamily IA, variant 3 K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D Pcryo_1697 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Pcryo_1696 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D Pcryo_2194 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Pcryo_1470 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Pcryo_0614 oxidoreductase-like protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Pcryo_0616 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Pcryo_0613 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Pcryo_0569 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Pcryo_0117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pcryo_0119 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Pcryo_0116 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Pcryo_0617 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Pcryo_0118 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pcryo_0120 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Pcryo_0618 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:pcr00620] D Pcryo_0203 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_0838 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_1050 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Pcryo_1051 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_1939 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pcryo_2398 Alcohol dehydrogenase GroES-like protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Pcryo_0217 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Pcryo_0216 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pcryo_0174 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Pcryo_1165 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Pcryo_1164 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Pcryo_0469 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_1844 Aldehyde dehydrogenase (NAD+) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Pcryo_1227 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Pcryo_1889 L-lactate dehydrogenase (cytochrome) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D Pcryo_0241 Glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Pcryo_1432 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Pcryo_0421 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Pcryo_0982 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Pcryo_0997 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Pcryo_2044 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pcryo_1894 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Pcryo_1822 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Pcryo_1034 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Pcryo_1878 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1162 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pcr00630] D Pcryo_1860 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Pcryo_0203 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_0838 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_1878 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D Pcryo_2044 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pcryo_0106 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Pcryo_2384 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Pcryo_0746 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1885 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Pcryo_1886 FAD linked oxidase-like protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D Pcryo_1887 protein of unknown function DUF224, cysteine-rich region K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Pcryo_0560 Catalase K03781 katE; catalase [EC:1.11.1.6] D Pcryo_1999 Catalase K03781 katE; catalase [EC:1.11.1.6] D Pcryo_2289 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Pcryo_0284 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Pcryo_2446 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Pcryo_0981 serine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Pcryo_1440 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pcryo_0318 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pcryo_0803 glycine dehydrogenase (decarboxylating) beta subunit / glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Pcryo_0806 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0805 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Pcryo_1024 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Pcryo_1987 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:pcr00640] D Pcryo_0203 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_0838 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_1518 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Pcryo_0217 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Pcryo_0216 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0018 Alcohol dehydrogenase, zinc-binding protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Pcryo_1784 Alcohol dehydrogenase, zinc-binding protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_0174 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Pcryo_1165 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Pcryo_1164 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Pcryo_0469 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Pcryo_0819 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pcryo_0114 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Pcryo_0115 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Pcryo_1517 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Pcryo_1310 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D Pcryo_1302 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D Pcryo_1309 2-methylcitrate dehydratase (trans-methylaconitate-forming) K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D Pcryo_1306 2-methylaconitate cis-trans isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D Pcryo_0746 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pcryo_1311 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D Pcryo_1013 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:pcr00650] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1235 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_0109 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Pcryo_0110 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Pcryo_0107 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Pcryo_0108 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Pcryo_0819 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pcryo_0818 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_0821 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_1858 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_1227 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Pcryo_0343 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Pcryo_1594 3-oxoacid CoA-transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Pcryo_1593 butyryl-CoA:acetate CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Pcryo_1592 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D Pcryo_0522 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pcryo_1549 thiamine pyrophosphate enzyme-like TPP binding region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pcryo_0523 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Pcryo_2409 short-chain dehydrogenase/reductase SDR K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:pcr00660] D Pcryo_0522 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pcryo_1549 thiamine pyrophosphate enzyme-like TPP binding region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pcryo_0523 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Pcryo_0114 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Pcryo_0115 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Pcryo_0865 HpcH/HpaI aldolase K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25] D Pcryo_1574 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Pcryo_1573 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Pcryo_1571 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:pcr00562] D Pcryo_0246 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Pcryo_1517 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Pcryo_0070 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pcr00190] D Pcryo_0573 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Pcryo_0574 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Pcryo_0575 NADH dehydrogenase subunit C / NADH dehydrogenase subunit D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D Pcryo_0576 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Pcryo_0577 NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Pcryo_0578 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Pcryo_0579 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Pcryo_0580 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Pcryo_0581 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Pcryo_0582 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Pcryo_0583 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Pcryo_0584 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Pcryo_0585 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Pcryo_0109 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Pcryo_0110 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Pcryo_0107 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Pcryo_0108 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Pcryo_1583 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Pcryo_1584 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Pcryo_1585 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Pcryo_0784 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Pcryo_0783 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Pcryo_0782 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Pcryo_0781 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Pcryo_1694 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Pcryo_1695 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Pcryo_1946 cytochrome c, class I K08738 CYC; cytochrome c D Pcryo_2329 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Pcryo_2327 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Pcryo_2328 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Pcryo_2330 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Pcryo_2326 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Pcryo_2333 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Pcryo_2331 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Pcryo_2332 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Pcryo_1083 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Pcryo_1882 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Pcryo_1067 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:pcr00680] D Pcryo_1939 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pcryo_1996 Carboxylesterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D Pcryo_0318 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pcryo_0981 serine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Pcryo_2289 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Pcryo_1870 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pcryo_1822 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Pcryo_2044 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pcryo_0092 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Pcryo_0683 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pcryo_0530 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pcryo_0217 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Pcryo_0216 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pcryo_0203 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_0838 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_1034 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Pcryo_0673 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Pcryo_0410 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pcryo_1434 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Pcryo_2146 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:pcr00910] D Pcryo_1320 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Pcryo_1323 assimilatory nitrate reductase (NADH) alpha subunit apoprotein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D Pcryo_1322 assimilatory nitrate reductase (NADH) beta subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D Pcryo_1319 assimilatory nitrite reductase (NAD(P)H) large subunit precursor K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D Pcryo_1318 assimilatory nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D Pcryo_0024 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Pcryo_1400 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Pcryo_1935 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Pcryo_1440 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pcryo_2165 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Pcryo_2164 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Pcryo_0240 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:pcr00920] D Pcryo_1390 Thiosulphate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Pcryo_1391 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Pcryo_1389 Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Pcryo_1388 Sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Pcryo_1387 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Pcryo_1393 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Pcryo_1396 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Pcryo_1394 nitrite and sulphite reductase 4Fe-4S region K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Pcryo_1210 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Pcryo_0414 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Pcryo_0798 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Pcryo_0193 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D Pcryo_1452 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D Pcryo_0148 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D Pcryo_1453 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pcr00061] D Pcryo_0174 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Pcryo_1165 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Pcryo_1164 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Pcryo_0469 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Pcryo_0517 acyl carrier protein K02078 acpP; acyl carrier protein D Pcryo_0515 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Pcryo_2189 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pcryo_2271 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pcryo_1069 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_0516 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_2161 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_1706 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Pcryo_1424 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Pcryo_2156 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1189 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1190 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pcr00071] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_2226 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_1185 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Pcryo_1537 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Pcryo_2120 acyl-CoA dehydrogenase-like protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Pcryo_0815 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Pcryo_2156 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1189 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1190 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_0338 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D Pcryo_1939 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:pcr00121] D Pcryo_2061 short-chain dehydrogenase/reductase SDR K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pcr00561] D Pcryo_1024 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_1041 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Pcryo_0145 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Pcryo_1242 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Pcryo_0247 Diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D Pcryo_0443 alpha/beta hydrolase fold protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:pcr00564] D Pcryo_1096 Glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Pcryo_0014 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Pcryo_0145 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Pcryo_1242 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Pcryo_0260 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Pcryo_1000 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Pcryo_1634 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Pcryo_1711 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Pcryo_0552 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Pcryo_2218 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Pcryo_0206 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Pcryo_2395 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Pcryo_1732 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Pcryo_2373 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Pcryo_0797 phospholipase D/Transphosphatidylase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:pcr00565] D Pcryo_0015 FAD linked oxidase-like protein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] D Pcryo_0260 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D Pcryo_0260 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D Pcryo_0260 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:pcr00592] D Pcryo_0260 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Pcryo_2226 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:pcr01040] D Pcryo_0999 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Pcryo_0142 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Pcryo_0143 oxidoreductase FAD/NAD(P)-binding protein K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D Pcryo_2434 lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Pcryo_2285 Palmitoyl-CoA hydrolase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pcr00230] D Pcryo_0569 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Pcryo_0185 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Pcryo_1103 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Pcryo_1401 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Pcryo_1857 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Pcryo_0208 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Pcryo_1856 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Pcryo_0302 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Pcryo_0303 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Pcryo_0160 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Pcryo_1146 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Pcryo_1651 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Pcryo_1201 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Pcryo_2257 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Pcryo_0660 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Pcryo_0835 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Pcryo_0064 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Pcryo_1128 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Pcryo_1293 phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Pcryo_1005 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Pcryo_0647 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Pcryo_2232 Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Pcryo_1140 molybdopterin dehydrogenase, FAD-binding protein K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D Pcryo_1141 xanthine dehydrogenase, molybdenum binding subunit apoprotein / Xanthine oxidase K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D Pcryo_1807 xanthine dehydrogenase, molybdenum binding subunit apoprotein K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D Pcryo_1808 molybdopterin dehydrogenase, FAD-binding protein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D Pcryo_1809 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D Pcryo_0016 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Pcryo_1143 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D Pcryo_2003 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Pcryo_1122 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pcryo_1117 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Pcryo_1525 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Pcryo_2005 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Pcryo_0173 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Pcryo_0377 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D Pcryo_1662 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Pcryo_0645 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Pcryo_0456 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D Pcryo_1739 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Pcryo_0121 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Pcryo_2339 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Pcryo_1455 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Pcryo_1393 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Pcryo_1916 Transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Pcryo_1915 conserved hypothetical protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D Pcryo_0404 Asp/Glu racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D Pcryo_1919 polysaccharide deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5] D Pcryo_1921 protein of unknown function DUF861, cupin_3 K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D Pcryo_1920 Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D Pcryo_0882 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Pcryo_0986 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Pcryo_0881 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Pcryo_0880 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Pcryo_0988 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:pcr00240] D Pcryo_0829 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Pcryo_0830 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Pcryo_0531 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Pcryo_0532 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Pcryo_1865 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Pcryo_1101 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Pcryo_2034 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Pcryo_1670 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Pcryo_1714 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Pcryo_0647 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Pcryo_0121 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Pcryo_0481 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Pcryo_1839 protein of unknown function DUF45 K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D Pcryo_1875 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Pcryo_1674 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Pcryo_2257 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Pcryo_0660 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Pcryo_0835 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Pcryo_0064 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Pcryo_2263 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Pcryo_1588 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Pcryo_1122 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pcryo_1117 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Pcryo_0155 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Pcryo_0570 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Pcryo_2314 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Pcryo_0903 flavin reductase-like, FMN-binding protein K09024 rutF; flavin reductase [EC:1.5.1.-] D Pcryo_2264 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pcr00250] D Pcryo_0599 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Pcryo_1567 putative L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Pcryo_0622 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Pcryo_0692 transcriptional regulator, XRE family K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Pcryo_0981 serine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Pcryo_1417 fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Pcryo_1864 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Pcryo_0095 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Pcryo_0645 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Pcryo_1146 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Pcryo_0531 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Pcryo_0819 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pcryo_0818 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_0821 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_1858 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_2165 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Pcryo_2164 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Pcryo_1400 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Pcryo_1935 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Pcryo_1138 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Pcryo_1440 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pcryo_0829 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Pcryo_0830 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Pcryo_1330 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Pcryo_2397 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Pcryo_1103 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pcr00260] D Pcryo_1639 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Pcryo_1701 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Pcryo_0279 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Pcryo_2390 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D Pcryo_2465 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Pcryo_0318 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pcryo_0981 serine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Pcryo_2289 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Pcryo_1024 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Pcryo_0673 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Pcryo_0410 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pcryo_1434 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Pcryo_2146 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Pcryo_2264 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D Pcryo_1131 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1780 L-amino acid oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_0803 glycine dehydrogenase (decarboxylating) beta subunit / glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Pcryo_0806 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0805 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Pcryo_0552 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Pcryo_0874 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D Pcryo_0873 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D Pcryo_1195 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Pcryo_1467 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Pcryo_0980 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Pcryo_0021 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Pcryo_0468 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Pcryo_0467 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Pcryo_0198 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:pcr00270] D Pcryo_1210 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Pcryo_0012 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Pcryo_0449 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Pcryo_0902 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Pcryo_0850 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Pcryo_1251 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Pcryo_1128 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Pcryo_1557 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pcryo_1448 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Pcryo_1639 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Pcryo_1701 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Pcryo_0279 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Pcryo_0414 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Pcryo_2201 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Pcryo_0798 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Pcryo_1176 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pcryo_0043 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Pcryo_2033 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Pcryo_0021 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Pcryo_2044 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pcryo_1828 Pyridoxal phosphate-dependent deaminase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25] D Pcryo_1195 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Pcryo_0380 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D Pcryo_0410 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pcryo_1434 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pcr00280] D Pcryo_1176 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_1185 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Pcryo_1537 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Pcryo_0344 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_2226 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pcryo_1513 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Pcryo_1517 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_0819 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pcryo_0342 3-methylcrotonoyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D Pcryo_0340 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D Pcryo_0341 Enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Pcryo_0343 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Pcryo_1594 3-oxoacid CoA-transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Pcryo_1593 butyryl-CoA:acetate CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pcr00290] D Pcryo_1467 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Pcryo_0980 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Pcryo_1574 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Pcryo_1573 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Pcryo_1571 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Pcryo_0522 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pcryo_1549 thiamine pyrophosphate enzyme-like TPP binding region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pcryo_0523 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Pcryo_0524 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Pcryo_1074 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Pcryo_1176 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pcryo_2440 aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D Pcryo_0692 transcriptional regulator, XRE family K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Pcryo_1162 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pcr00300] D Pcryo_0279 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Pcryo_1639 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Pcryo_1701 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Pcryo_0158 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pcryo_1217 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pcryo_0035 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Pcryo_0725 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Pcryo_1405 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Pcryo_0439 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Pcryo_0549 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Pcryo_0220 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Pcryo_0219 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Pcryo_1275 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Pcryo_2377 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Pcryo_2376 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:pcr00310] D Pcryo_0895 delta-1-piperideine-6-carboxylate dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D Pcryo_0893 4-aminobutyrate aminotransferase apoenzyme K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39] D Pcryo_0112 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0815 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0021 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Pcryo_0819 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pcryo_0818 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_0821 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_1858 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_0894 protein of unknown function DUF1338 K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D Pcryo_1018 FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase D Pcryo_0900 FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase D Pcryo_0897 L-pipecolate dehydrogenase K26065 amaA; L-pipecolate oxidase D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:pcr00220] D Pcryo_1461 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Pcryo_1864 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Pcryo_0095 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Pcryo_1794 Arginase/agmatinase/formiminoglutamase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D Pcryo_0882 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Pcryo_0986 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Pcryo_0881 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Pcryo_0880 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Pcryo_0988 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Pcryo_1330 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Pcryo_1440 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pcryo_1400 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Pcryo_1935 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Pcryo_0692 transcriptional regulator, XRE family K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Pcryo_2405 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Pcryo_1193 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Pcryo_0568 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Pcryo_1680 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Pcryo_1405 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Pcryo_2049 acetylornithine deacetylase / acetylornithine deacetylase ArgE, Metallo peptidase, MEROPS family M20A K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:pcr00330] D Pcryo_0822 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D Pcryo_0037 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Pcryo_1502 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_1131 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1780 L-amino acid oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1550 agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D Pcryo_0431 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Pcryo_1216 Aldehyde dehydrogenase (NAD+) K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D Pcryo_1794 Arginase/agmatinase/formiminoglutamase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D Pcryo_0177 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Pcryo_1138 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Pcryo_1795 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12] D Pcryo_1682 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Pcryo_0322 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:pcr00340] D Pcryo_2193 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Pcryo_0644 tRNA synthetase, class II (G, H, P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Pcryo_2302 phosphoribosyl-ATP pyrophosphatase / phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Pcryo_2423 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Pcryo_2442 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Pcryo_2391 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Pcryo_2443 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Pcryo_1205 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_2191 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_0738 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_2192 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Pcryo_1932 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Pcryo_1930 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Pcryo_1934 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Pcryo_1933 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_1131 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1780 L-amino acid oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:pcr00350] D Pcryo_1205 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_2191 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_0738 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_1557 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pcryo_1555 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Pcryo_1558 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Pcryo_1131 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1780 L-amino acid oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1939 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pcryo_0147 putative 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D Pcryo_0818 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_0821 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_1858 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_1561 maleylpyruvate isomerase K01801 nagL; maleylpyruvate isomerase [EC:5.2.1.4] C 00360 Phenylalanine metabolism [PATH:pcr00360] D Pcryo_1554 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D Pcryo_1131 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1780 L-amino acid oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_0750 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_1235 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Pcryo_1205 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_2191 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_0738 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_1557 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pcryo_1555 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Pcryo_0168 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D Pcryo_0431 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:pcr00380] D Pcryo_0112 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0815 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1131 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1780 L-amino acid oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_0431 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Pcryo_0560 Catalase K03781 katE; catalase [EC:1.11.1.6] D Pcryo_1999 Catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pcr00400] D Pcryo_1507 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Pcryo_2167 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Pcryo_1476 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Pcryo_0150 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Pcryo_2168 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Pcryo_1206 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D Pcryo_1635 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Pcryo_1923 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Pcryo_1924 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Pcryo_1441 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Pcryo_1442 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Pcryo_0466 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Pcryo_1443 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Pcryo_0468 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Pcryo_0467 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Pcryo_0198 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Pcryo_1204 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Pcryo_1205 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_2191 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_0738 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_1557 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pcryo_1554 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pcr00410] D Pcryo_0182 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Pcryo_0819 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_0126 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_1517 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:pcr00430] D Pcryo_1221 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pcryo_1400 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Pcryo_0216 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pcryo_0217 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:pcr00450] D Pcryo_0012 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Pcryo_0449 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Pcryo_0902 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Pcryo_0429 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Pcryo_1393 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Pcryo_1596 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pcr00460] D Pcryo_1221 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pcryo_1567 putative L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Pcryo_0318 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pcr00470] D Pcryo_1460 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Pcryo_2030 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pcryo_0021 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Pcryo_1330 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Pcryo_2249 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Pcryo_2343 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Pcryo_0220 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Pcryo_0219 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Pcryo_1275 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Pcryo_1219 proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D Pcryo_1218 FAD dependent oxidoreductase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-] D Pcryo_0168 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:pcr00480] D Pcryo_1221 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pcryo_0043 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Pcryo_2033 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Pcryo_0051 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Pcryo_1508 alanyl aminopeptidase, Metallo peptidase, MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Pcryo_0878 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pcryo_1722 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pcryo_2073 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pcryo_1010 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pcryo_1966 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D Pcryo_0315 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Pcryo_0314 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Pcryo_0694 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Pcryo_0037 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:pcr00540] D Pcryo_1705 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Pcryo_2026 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Pcryo_1707 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Pcryo_0663 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Pcryo_1506 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Pcryo_1063 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Pcryo_1492 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Pcryo_1874 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Pcryo_1491 Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Pcryo_1064 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Pcryo_1730 Three-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Pcryo_1182 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Pcryo_1749 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Pcryo_1245 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Pcryo_0270 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pcr00541] D Pcryo_0117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pcryo_0116 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Pcryo_0617 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Pcryo_0119 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Pcryo_0625 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Pcryo_0624 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Pcryo_0626 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Pcryo_0627 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Pcryo_0120 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Pcryo_0618 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Pcryo_2396 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Pcryo_0613 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Pcryo_0614 oxidoreductase-like protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Pcryo_0616 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00550 Peptidoglycan biosynthesis [PATH:pcr00550] D Pcryo_2194 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Pcryo_1470 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Pcryo_2031 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Pcryo_2343 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Pcryo_2377 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Pcryo_2030 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pcryo_2376 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Pcryo_1712 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Pcryo_1983 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Pcryo_2375 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Pcryo_2032 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Pcryo_1883 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Pcryo_2174 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Pcryo_1646 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Pcryo_1745 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pcryo_2378 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pcryo_0658 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pcryo_0436 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:pcr00552] D Pcryo_1983 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pcr00543] D Pcryo_1210 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pcr00730] D Pcryo_0093 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Pcryo_0179 putative phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Pcryo_1656 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pcryo_0245 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Pcryo_0248 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D Pcryo_0679 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Pcryo_2394 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Pcryo_1735 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Pcryo_1739 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pcr00740] D Pcryo_0244 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Pcryo_0102 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Pcryo_2470 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Pcryo_2392 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Pcryo_2469 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Pcryo_2042 FMN adenylyltransferase / riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:pcr00750] D Pcryo_1007 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Pcryo_0298 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D Pcryo_1434 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Pcryo_1458 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Pcryo_0370 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Pcryo_2465 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:pcr00760] D Pcryo_0599 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Pcryo_1256 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D Pcryo_0600 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Pcryo_0602 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Pcryo_1089 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Pcryo_2058 transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Pcryo_2257 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Pcryo_0660 3'-nucleotidase / exopolyphosphatase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Pcryo_2204 Cytidyltransferase-related protein K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D Pcryo_0215 Cytidyltransferase-related protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Pcryo_0121 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Pcryo_0853 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Pcryo_0296 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Pcryo_2475 competence/damage-inducible protein cinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Pcryo_2205 Nicotinate phosphoribosyltransferase related protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D Pcryo_0457 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Pcryo_1643 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Pcryo_1036 pyridine nucleotide-disulfide oxidoreductase dimerization region K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D Pcryo_0543 alanine dehydrogenase/PNT-like protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Pcryo_0544 putative NAD(P) transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Pcryo_0545 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Pcryo_0818 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_0821 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pcryo_1858 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:pcr00770] D Pcryo_0522 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pcryo_1549 thiamine pyrophosphate enzyme-like TPP binding region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pcryo_0523 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Pcryo_0524 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Pcryo_1074 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Pcryo_0125 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Pcryo_0126 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Pcryo_0345 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Pcryo_2118 Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Pcryo_0121 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Pcryo_0359 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Pcryo_0066 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Pcryo_1510 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Pcryo_1176 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pcryo_0182 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:pcr00780] D Pcryo_2455 Methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Pcryo_2189 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pcryo_2271 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pcryo_1069 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_0516 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_2161 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_1706 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Pcryo_1424 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Pcryo_2454 aminotransferase, class I and II K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Pcryo_0361 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Pcryo_0362 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Pcryo_2150 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Pcryo_0346 biotin/lipoate A/B protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pcr00785] D Pcryo_1084 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Pcryo_0744 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Pcryo_0197 lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_1050 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Pcryo_1051 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Pcryo_0111 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Pcryo_0112 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Pcryo_0803 glycine dehydrogenase (decarboxylating) beta subunit / glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Pcryo_0806 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Pcryo_0805 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pcr00790] D Pcryo_1425 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Pcryo_1208 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Pcryo_0124 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Pcryo_1209 conserved hypothetical protein K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Pcryo_2019 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Pcryo_2315 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Pcryo_0470 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Pcryo_0244 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Pcryo_0102 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Pcryo_2190 anthranilate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Pcryo_0152 aminodeoxychorismate lyase apoprotein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Pcryo_1497 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Pcryo_1553 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Pcryo_0140 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Pcryo_1554 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D Pcryo_0995 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33] D Pcryo_0724 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Pcryo_0777 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Pcryo_0462 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Pcryo_0712 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Pcryo_0709 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Pcryo_0707 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Pcryo_0711 molybdopterin binding domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Pcryo_0713 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Pcryo_1805 Uncharacterized MobA-related protein-like protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Pcryo_0710 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:pcr00670] D Pcryo_2315 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Pcryo_0640 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Pcryo_0318 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pcryo_1857 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Pcryo_1651 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Pcryo_2467 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Pcryo_0806 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Pcryo_0449 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Pcryo_2314 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Pcryo_1987 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Pcryo_1449 5,10-methylenetetrahydrofolate reductase (FADH) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Pcryo_1895 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pcr00860] D Pcryo_2381 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pcryo_0189 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Pcryo_0171 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Pcryo_1760 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Pcryo_0098 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Pcryo_0099 putative uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Pcryo_1681 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Pcryo_0243 coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Pcryo_2449 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Pcryo_2151 conserved hypothetical protein 701 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D Pcryo_0415 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Pcryo_1397 precorrin-2 dehydrogenase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D Pcryo_1324 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Pcryo_1002 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Pcryo_1027 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Pcryo_1026 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Pcryo_1028 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Pcryo_1383 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D Pcryo_1384 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pcr00130] D Pcryo_0317 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D Pcryo_1980 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Pcryo_0593 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Pcryo_0130 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Pcryo_0592 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D Pcryo_0688 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Pcryo_1691 putative ubiquinone biosyntheis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Pcryo_1129 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Pcryo_0537 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Pcryo_1555 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pcr00900] D Pcryo_0245 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Pcryo_1710 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Pcryo_1868 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Pcryo_0186 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Pcryo_1149 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Pcryo_0652 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Pcryo_2002 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_2228 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Pcryo_1756 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Pcryo_1712 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:pcr00907] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_2398 Alcohol dehydrogenase GroES-like protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Pcryo_0343 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Pcryo_2226 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Pcryo_1849 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pcr00523] D Pcryo_0625 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Pcryo_0624 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Pcryo_0626 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Pcryo_0627 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Pcryo_0624 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:pcr00332] D Pcryo_1682 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Pcryo_0322 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:pcr00261] D Pcryo_1393 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Pcryo_1639 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Pcryo_1701 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Pcryo_0158 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pcryo_1217 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pcryo_0035 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pcr00521] D Pcryo_0569 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Pcryo_0246 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Pcryo_0625 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Pcryo_0624 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Pcryo_0626 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Pcryo_0627 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:pcr00525] D Pcryo_0625 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Pcryo_0624 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:pcr00401] D Pcryo_1206 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D Pcryo_1205 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_2191 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_0738 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_1557 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Pcryo_1923 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Pcryo_1924 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Pcryo_1441 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Pcryo_0515 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Pcryo_1069 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_0516 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_2161 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_1424 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Pcryo_0517 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:pcr00999] D Pcryo_0850 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Pcryo_0150 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pcr00362] D Pcryo_1267 benzoate 1,2-dioxygenase, alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Pcryo_1266 benzoate 1,2-dioxygenase, beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Pcryo_1265 oxidoreductase FAD/NAD(P)-binding protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Pcryo_1264 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D Pcryo_1268 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D Pcryo_1270 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Pcryo_1269 muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D Pcryo_1259 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D Pcryo_0751 alpha/beta hydrolase fold protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D Pcryo_0934 alpha/beta hydrolase fold protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D Pcryo_1262 3-oxoadipate CoA-transferase alpha subunit K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D Pcryo_1261 3-oxoadipate CoA-transferase beta subunit K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D Pcryo_2226 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pcryo_1260 Beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D Pcryo_0745 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_0815 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_1235 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:pcr00627] D Pcryo_2290 flavin-containing monooxygenase FMO K10215 ethA; monooxygenase [EC:1.14.13.-] D Pcryo_0431 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:pcr00364] D Pcryo_1267 benzoate 1,2-dioxygenase, alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Pcryo_1266 benzoate 1,2-dioxygenase, beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Pcryo_1265 oxidoreductase FAD/NAD(P)-binding protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Pcryo_1264 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D Pcryo_1268 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D Pcryo_1270 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:pcr00625] D Pcryo_1253 alpha/beta hydrolase fold protein K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D Pcryo_1939 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pcryo_1015 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pcryo_0968 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pcr00361] D Pcryo_1253 alpha/beta hydrolase fold protein K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D Pcryo_1268 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D Pcryo_1270 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Pcryo_0968 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:pcr00623] D Pcryo_1268 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D Pcryo_1270 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00622 Xylene degradation [PATH:pcr00622] D Pcryo_1267 benzoate 1,2-dioxygenase, alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Pcryo_1266 benzoate 1,2-dioxygenase, beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Pcryo_1265 oxidoreductase FAD/NAD(P)-binding protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Pcryo_1264 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] C 00633 Nitrotoluene degradation [PATH:pcr00633] D Pcryo_0201 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D Pcryo_1326 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D Pcryo_2226 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:pcr00643] D Pcryo_1558 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Pcryo_0431 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation D Pcryo_0882 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Pcryo_0986 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Pcryo_0881 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Pcryo_0880 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Pcryo_0988 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:pcr00930] D Pcryo_1233 acyl-CoA dehydrogenase-like protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D Pcryo_1234 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Pcryo_2227 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pcryo_1539 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:pcr00626] D Pcryo_1939 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pcr03020] D Pcryo_2177 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Pcryo_2176 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Pcryo_0509 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Pcryo_2004 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pcr03010] D Pcryo_1673 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Pcryo_0389 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Pcryo_0490 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Pcryo_0508 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Pcryo_0501 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Pcryo_1032 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Pcryo_2186 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Pcryo_0498 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Pcryo_1748 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Pcryo_0483 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Pcryo_0507 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Pcryo_2187 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Pcryo_0506 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Pcryo_0497 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Pcryo_0079 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Pcryo_2322 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Pcryo_0493 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Pcryo_1031 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Pcryo_0488 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Pcryo_1667 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Pcryo_0231 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Pcryo_2180 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Pcryo_0487 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Pcryo_0484 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Pcryo_0485 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Pcryo_0496 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Pcryo_0499 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Pcryo_2178 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Pcryo_1030 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Pcryo_2179 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Pcryo_2181 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Pcryo_1747 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Pcryo_0494 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Pcryo_0503 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Pcryo_0491 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Pcryo_0510 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Pcryo_0500 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Pcryo_2319 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Pcryo_2300 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Pcryo_1755 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Pcryo_0489 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Pcryo_0486 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Pcryo_0495 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Pcryo_0184 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Pcryo_1754 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Pcryo_1989 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Pcryo_0492 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Pcryo_0502 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Pcryo_2207 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Pcryo_0514 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Pcryo_1990 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Pcryo_0002 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Pcryo_2301 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Pcryo_0505 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Pcryo_R0019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0052 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0049 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0057 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0056 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pcr00970] D Pcryo_R0054 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0058 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0063 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pcryo_R0005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pcryo_R0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pcryo_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pcryo_R0028 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pcryo_R0043 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pcryo_R0027 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pcryo_R0041 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pcryo_R0036 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Pcryo_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pcryo_R0007 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pcryo_R0045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pcryo_R0055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pcryo_R0031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pcryo_R0046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pcryo_R0015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pcryo_R0010 tRNA-His K14226 tRNA-His; tRNA His D Pcryo_R0020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pcryo_R0064 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pcryo_R0051 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pcryo_R0059 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pcryo_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pcryo_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pcryo_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pcryo_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pcryo_R0024 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pcryo_R0025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pcryo_R0032 tRNA-Met K14230 tRNA-Met; tRNA Met D Pcryo_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met D Pcryo_R0002 tRNA-Met K14230 tRNA-Met; tRNA Met D Pcryo_R0066 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Pcryo_R0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pcryo_R0018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pcryo_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pcryo_R0053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pcryo_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pcryo_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pcryo_R0013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pcryo_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Pcryo_R0014 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Pcryo_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val D Pcryo_R0040 tRNA-Val K14237 tRNA-Val; tRNA Val D Pcryo_R0042 tRNA-Val K14237 tRNA-Val; tRNA Val D Pcryo_2381 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pcryo_0476 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Pcryo_0475 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Pcryo_0477 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Pcryo_0665 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Pcryo_1638 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Pcryo_1183 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pcryo_2056 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Pcryo_2055 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Pcryo_2417 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Pcryo_1850 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Pcryo_1003 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Pcryo_1596 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Pcryo_2467 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Pcryo_2138 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Pcryo_0566 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pcryo_0402 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Pcryo_1409 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Pcryo_2239 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pcryo_0463 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Pcryo_0653 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Pcryo_2299 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Pcryo_2298 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Pcryo_2269 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pcryo_1750 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pcr03060] D Pcryo_0504 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Pcryo_2183 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Pcryo_0071 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Pcryo_1108 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Pcryo_1107 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Pcryo_1109 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Pcryo_2473 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pcryo_0274 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Pcryo_1738 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Pcryo_1985 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Pcryo_R0034 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Pcryo_1481 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Pcryo_1297 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Pcryo_2303 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Pcryo_1776 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Pcryo_2304 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Pcryo_2305 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Pcryo_0365 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Pcryo_1352 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Pcryo_0401 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pcr04122] D Pcryo_1656 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pcryo_0059 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Pcryo_1174 DsrE-like protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Pcryo_1171 putative DsrC-like protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Pcryo_1148 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Pcryo_0707 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Pcryo_0712 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Pcryo_0708 thiamineS K03636 moaD; sulfur-carrier protein D Pcryo_1158 UBA/THIF-type NAD/FAD binding fold protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Pcryo_0709 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Pcryo_0711 molybdopterin binding domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Pcryo_0225 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:pcr03018] D Pcryo_2310 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Pcryo_0282 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Pcryo_1474 DEAD/DEAH box helicase-like protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Pcryo_1870 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pcryo_0080 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Pcryo_2420 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Pcryo_2293 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Pcryo_2456 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Pcryo_0541 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pcryo_1493 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Pcryo_1882 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Pcryo_1067 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Pcryo_0123 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pcr03030] D Pcryo_0437 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pcryo_0855 DNA polymerase III, epsilon subunit K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D Pcryo_1214 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pcryo_1407 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pcryo_1065 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pcryo_0564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pcryo_0050 putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pcryo_0004 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pcryo_1459 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Pcryo_1125 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Pcryo_1958 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Pcryo_1505 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Pcryo_0419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pcryo_0351 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pcr03410] D Pcryo_0851 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Pcryo_1676 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Pcryo_2284 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Pcryo_0162 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Pcryo_0376 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Pcryo_1445 HhH-GPD K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Pcryo_1192 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Pcryo_0419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pcryo_0720 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Pcryo_0351 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pcr03420] D Pcryo_1664 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Pcryo_1960 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Pcryo_0866 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Pcryo_0737 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Pcryo_2316 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Pcryo_1017 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Pcryo_0419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pcryo_0351 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pcr03430] D Pcryo_0273 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Pcryo_1495 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Pcryo_1017 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Pcryo_1091 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Pcryo_1090 conserved hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Pcryo_2213 Exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D Pcryo_0720 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Pcryo_1958 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Pcryo_1214 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pcryo_0004 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pcryo_1407 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pcryo_0564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pcryo_1065 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pcryo_0437 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pcryo_0855 DNA polymerase III, epsilon subunit K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D Pcryo_0050 putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pcryo_0351 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:pcr03440] D Pcryo_0720 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Pcryo_1958 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Pcryo_0005 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Pcryo_0369 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Pcryo_0800 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Pcryo_2014 recA protein K03553 recA; recombination protein RecA D Pcryo_0419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pcryo_0684 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Pcryo_0685 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Pcryo_0671 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Pcryo_2402 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Pcryo_1291 UvrD/REP helicase K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Pcryo_1290 putative exoribodeoxynuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Pcryo_1292 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Pcryo_1214 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pcryo_0004 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pcryo_1407 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pcryo_0564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pcryo_1065 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pcryo_0437 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pcryo_0855 DNA polymerase III, epsilon subunit K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D Pcryo_0050 putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pcryo_2007 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pcr02010] D Pcryo_1390 Thiosulphate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Pcryo_1391 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Pcryo_1389 Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Pcryo_1388 Sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Pcryo_1387 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Pcryo_0706 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Pcryo_0705 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Pcryo_1728 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Pcryo_1727 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Pcryo_1726 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Pcryo_2162 extracellular solute-binding protein, family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Pcryo_0237 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Pcryo_0238 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Pcryo_0239 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Pcryo_1086 Substrate-binding region of ABC-type glycine betaine transport system K02001 proW; glycine betaine/proline transport system permease protein D Pcryo_1087 Quaternary-amine-transporting ATPase K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Pcryo_2219 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Pcryo_2220 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Pcryo_2221 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Pcryo_2222 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Pcryo_0334 L-glutamate-binding protein / L-aspartate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D Pcryo_0336 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein K10002 gltK; glutamate/aspartate transport system permease protein D Pcryo_0335 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein K10003 gltJ; glutamate/aspartate transport system permease protein D Pcryo_0337 L-glutamate ABC transporter ATP-binding protein / L-aspartate ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D Pcryo_1928 amino acid ABC transporter substrate-binding protein, PAAT family K02424 tcyA; L-cystine transport system substrate-binding protein D Pcryo_1927 amino acid ABC transporter membrane protein, PAAT family K10009 tcyB; L-cystine transport system permease protein D Pcryo_1926 amino acid ABC transporter ATP-binding protein, PAAT family K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Pcryo_0326 amino acid ABC transporter substrate-binding protein, PAAT family K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D Pcryo_0327 amino acid ABC transporter substrate-binding protein, PAAT family K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D Pcryo_0325 amino acid ABC transporter substrate-binding protein, PAAT family K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D Pcryo_0328 amino acid ABC transporter membrane protein 1, PAAT family K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D Pcryo_0329 amino acid ABC transporter membrane protein 2, PAAT family K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D Pcryo_0324 amino acid ABC transporter ATP-binding protein, PAAT family K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D Pcryo_2107 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Pcryo_2106 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Pcryo_2105 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D Pcryo_0994 amino acid/amide ABC transporter substrate-binding protein, HAAT family K11959 urtA; urea transport system substrate-binding protein D Pcryo_0993 amino acid/amide ABC transporter membrane protein 1, HAAT family K11960 urtB; urea transport system permease protein D Pcryo_0992 amino acid/amide ABC transporter membrane protein 2, HAAT family K11961 urtC; urea transport system permease protein D Pcryo_0991 ABC transporter related protein K11962 urtD; urea transport system ATP-binding protein D Pcryo_0990 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K11963 urtE; urea transport system ATP-binding protein D Pcryo_0759 extracellular solute-binding protein, family 5 K12368 dppA; dipeptide transport system substrate-binding protein D Pcryo_0758 binding-protein-dependent transport systems inner membrane component K12369 dppB; dipeptide transport system permease protein D Pcryo_0757 binding-protein-dependent transport systems inner membrane component K12370 dppC; dipeptide transport system permease protein D Pcryo_0756 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K12371 dppD; dipeptide transport system ATP-binding protein D Pcryo_0755 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K12372 dppF; dipeptide transport system ATP-binding protein D Pcryo_1433 extracellular solute-binding protein, family 5 K13893 yejA; microcin C transport system substrate-binding protein D Pcryo_1431 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein D Pcryo_1430 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein D Pcryo_1429 ABC transporter related protein K13896 yejF; microcin C transport system ATP-binding protein D Pcryo_1282 periplasmic binding protein K23181 fecB; ferric citrate transport system substrate-binding protein D Pcryo_1284 transport system permease protein K23182 fecD; ferric citrate transport system permease protein D Pcryo_1283 transport system permease protein K23183 fecC; ferric citrate transport system permease protein D Pcryo_1285 ABC transporter related protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D Pcryo_2335 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Pcryo_2338 ABC-3 K09816 znuB; zinc transport system permease protein D Pcryo_2337 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Pcryo_0787 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Pcryo_0788 Lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Pcryo_2110 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D Pcryo_2111 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D Pcryo_2112 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B D Pcryo_2113 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Pcryo_0053 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein D Pcryo_0054 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein D Pcryo_1488 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Pcryo_1062 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Pcryo_0090 ABC transporter related protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Pcryo_0562 ABC transporter related protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:pcr03070] D Pcryo_1954 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D Pcryo_1955 putative general secretion pathway protein K02452 gspC; general secretion pathway protein C D Pcryo_0256 General secretion pathway protein F K02455 gspF; general secretion pathway protein F D Pcryo_0257 General secretion pathway protein G K02456 gspG; general secretion pathway protein G D Pcryo_1529 General secretion pathway protein I K02458 gspI; general secretion pathway protein I D Pcryo_1528 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J D Pcryo_1527 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D Pcryo_1098 hypothetical protein K02461 gspL; general secretion pathway protein L D Pcryo_0249 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Pcryo_1533 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Pcryo_1108 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Pcryo_1107 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Pcryo_2183 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Pcryo_0071 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Pcryo_0504 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Pcryo_1109 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Pcryo_2473 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pcryo_0274 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Pcryo_1481 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Pcryo_1738 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Pcryo_1985 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Pcryo_2303 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Pcryo_1776 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Pcryo_2304 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Pcryo_2305 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:pcr02020] D Pcryo_2215 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Pcryo_2216 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Pcryo_2219 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Pcryo_2323 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Pcryo_0135 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Pcryo_1224 periplasmic sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Pcryo_2324 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Pcryo_2325 two component transcriptional regulator, winged helix family K07661 rstA; two-component system, OmpR family, response regulator RstA D Pcryo_0157 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Pcryo_0703 signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Pcryo_0702 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Pcryo_1827 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Pcryo_1826 membrane protein TctB, putative K07794 tctB; putative tricarboxylic transport membrane protein D Pcryo_1825 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein D Pcryo_0003 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Pcryo_0982 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Pcryo_0764 histidine kinase internal region K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D Pcryo_0765 transcriptional regulator, LytR/AlgR family K07705 lytT; two-component system, LytTR family, response regulator LytT D Pcryo_0096 histidine kinase internal region K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D Pcryo_0097 transcriptional regulator, LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR D Pcryo_0381 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Pcryo_0677 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Pcryo_1640 carbon storage regulator, CsrA / carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Pcryo_1775 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Pcryo_1832 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pcryo_1829 putative signal peptide protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pcryo_1830 P pilus assembly protein chaperone PapD-like protein K07346 fimC; fimbrial chaperone protein D Pcryo_1831 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D Pcryo_0441 UTP-GlnB (protein PII) uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Pcryo_1716 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Pcryo_1717 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Pcryo_1440 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pcryo_0888 short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0676 periplasmic sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Pcryo_0675 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Pcryo_0223 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Pcryo_0271 putative pilin protein PilA K02650 pilA; type IV pilus assembly protein PilA D Pcryo_0269 Fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA D Pcryo_0385 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pcryo_0386 response regulator receiver domain protein (CheY-like) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Pcryo_2097 MCP methyltransferase, CheR-type K02661 pilK; type IV pilus assembly protein PilK D Pcryo_2098 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D Pcryo_2099 CheW protein K02659 pilI; twitching motility protein PilI D Pcryo_2096 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Pcryo_2101 response regulator receiver domain protein (CheY-like) K02657 pilG; twitching motility two-component system response regulator PilG D Pcryo_2100 response regulator receiver domain protein (CheY-like) K02658 pilH; twitching motility two-component system response regulator PilH D Pcryo_2095 CheB methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D Pcryo_0337 L-glutamate ABC transporter ATP-binding protein / L-aspartate ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D Pcryo_0336 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein K10002 gltK; glutamate/aspartate transport system permease protein D Pcryo_0335 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein K10003 gltJ; glutamate/aspartate transport system permease protein D Pcryo_0334 L-glutamate-binding protein / L-aspartate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D Pcryo_1330 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Pcryo_1583 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Pcryo_1584 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Pcryo_1585 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Pcryo_1946 cytochrome c, class I K08738 CYC; cytochrome c D Pcryo_0784 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Pcryo_0783 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Pcryo_0782 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Pcryo_0781 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Pcryo_1694 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Pcryo_1695 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Pcryo_0609 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Pcryo_1469 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Pcryo_0610 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Pcryo_0611 Protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Pcryo_0657 periplasmic sensor signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Pcryo_1951 GAF sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Pcryo_1213 Hpt domain protein K20976 hptB; histidine phosphotransfer protein HptB C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:pcr04148] D Pcryo_1794 Arginase/agmatinase/formiminoglutamase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D Pcryo_0037 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Pcryo_1583 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pcr02024] D Pcryo_1493 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Pcryo_1923 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Pcryo_1924 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Pcryo_1441 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Pcryo_1507 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Pcryo_0817 transcriptional regulator, IclR family K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor D Pcryo_2156 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1189 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1190 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_2336 putative ferric uptake regulator, FUR family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Pcryo_0244 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Pcryo_2470 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Pcryo_1329 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Pcryo_1328 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Pcryo_1759 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system D Pcryo_2473 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pcryo_2183 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Pcryo_0071 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Pcryo_0504 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Pcryo_1109 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Pcryo_0274 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Pcryo_1481 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Pcryo_1738 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Pcryo_1985 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:pcr02030] D Pcryo_0759 extracellular solute-binding protein, family 5 K12368 dppA; dipeptide transport system substrate-binding protein D Pcryo_0385 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pcryo_0386 response regulator receiver domain protein (CheY-like) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Pcryo_0387 CheC-like family protein K03409 cheX; chemotaxis protein CheX D Pcryo_0388 hypothetical protein K03409 cheX; chemotaxis protein CheX C 02040 Flagellar assembly [PATH:pcr02040] D Pcryo_1928 amino acid ABC transporter substrate-binding protein, PAAT family K02424 tcyA; L-cystine transport system substrate-binding protein D Pcryo_1124 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Pcryo_0223 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Pcryo_1870 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:pcr04980] D Pcryo_1002 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Pcryo_0449 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pcr01501] D Pcryo_1156 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Pcryo_0308 glycoside hydrolase, family 3-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Pcryo_1775 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Pcryo_1757 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Pcryo_1758 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Pcryo_1759 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system D Pcryo_2174 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Pcryo_1745 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pcryo_2378 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pcr01502] D Pcryo_2030 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pcryo_1460 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Pcryo_2376 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Pcryo_2375 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Pcryo_2032 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pcr01503] D Pcryo_1245 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Pcryo_1224 periplasmic sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Pcryo_0157 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Pcryo_0129 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Pcryo_1757 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Pcryo_1758 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Pcryo_1705 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pcr01000] C 01001 Protein kinases [BR:pcr01001] D Pcryo_0611 Protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Pcryo_2215 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Pcryo_2323 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Pcryo_2324 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Pcryo_1224 periplasmic sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Pcryo_0703 signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Pcryo_0381 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Pcryo_0764 histidine kinase internal region K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D Pcryo_0096 histidine kinase internal region K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D Pcryo_1716 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Pcryo_0676 periplasmic sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Pcryo_2287 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Pcryo_0385 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pcryo_2096 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Pcryo_0657 periplasmic sensor signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Pcryo_1951 GAF sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:pcr01009] D Pcryo_1448 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Pcryo_1998 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Pcryo_0944 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Pcryo_2146 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pcr01002] D Pcryo_1352 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Pcryo_0401 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Pcryo_0067 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Pcryo_0016 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Pcryo_1103 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Pcryo_2165 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Pcryo_2397 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Pcryo_0622 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Pcryo_0077 Peptidase C56, PfpI K05520 yhbO; deglycase [EC:3.5.1.124] D Pcryo_0794 Abortive infection protein K07052 K07052; CAAX protease family protein D Pcryo_1508 alanyl aminopeptidase, Metallo peptidase, MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Pcryo_0084 oligopeptidase A, Metallo peptidase, MEROPS family M03A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Pcryo_2129 peptidase M16-like protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D Pcryo_1482 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Pcryo_1483 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Pcryo_0051 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Pcryo_1814 peptidase M19, renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Pcryo_0549 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Pcryo_2214 peptidase M23B K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D Pcryo_0442 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Pcryo_2273 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Pcryo_2020 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Pcryo_1709 site-2 protease, Metallo peptidase, MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Pcryo_1372 protein of unknown function DUF980 K09933 mtfA; MtfA peptidase D Pcryo_0157 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Pcryo_1115 peptidase S1 and S6, chymotrypsin/Hap K04691 hhoB; serine protease DegS [EC:3.4.21.-] D Pcryo_0658 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pcryo_0678 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Pcryo_0436 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Pcryo_2234 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Pcryo_1899 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Pcryo_0365 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Pcryo_0309 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Pcryo_0674 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Pcryo_0792 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D Pcryo_1184 inner membrane peptidase, Serine peptidase, MEROPS family S49 K04774 sohB; serine protease SohB [EC:3.4.21.-] D Pcryo_0859 Twin-arginine translocation pathway signal K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Pcryo_1221 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 01003 Glycosyltransferases [BR:pcr01003] D Pcryo_1883 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Pcryo_1646 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Pcryo_2174 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Pcryo_1802 trehalose 6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Pcryo_2502 conserved hypothetical protein-putative glycosyltransferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pcr01005] D Pcryo_1705 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Pcryo_1506 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Pcryo_2026 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Pcryo_1707 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Pcryo_0663 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Pcryo_1063 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Pcryo_1182 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Pcryo_1749 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Pcryo_1730 Three-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Pcryo_1245 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Pcryo_1874 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Pcryo_1064 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Pcryo_1491 Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Pcryo_1492 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Pcryo_0270 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pcr01011] D Pcryo_2194 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Pcryo_1470 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Pcryo_2031 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Pcryo_2343 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Pcryo_2377 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Pcryo_2030 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pcryo_1460 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Pcryo_2249 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Pcryo_0859 Twin-arginine translocation pathway signal K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Pcryo_2375 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Pcryo_2032 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Pcryo_1983 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Pcryo_2039 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Pcryo_2174 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Pcryo_1646 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Pcryo_1745 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pcryo_2378 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pcryo_0658 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pcryo_0436 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Pcryo_0678 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Pcryo_1883 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Pcryo_2214 peptidase M23B K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D Pcryo_2046 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Pcryo_0662 Lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Pcryo_1113 Lytic transglycosylase, catalytic K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D Pcryo_0154 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Pcryo_0046 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Pcryo_1486 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Pcryo_2038 negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:pcr01004] D Pcryo_0515 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Pcryo_2189 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pcryo_2271 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pcryo_1069 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_0516 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_2161 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pcryo_1706 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Pcryo_1424 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Pcryo_2434 lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Pcryo_2285 Palmitoyl-CoA hydrolase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D Pcryo_0999 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Pcryo_0142 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Pcryo_0203 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_0838 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pcryo_1518 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Pcryo_2156 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1189 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1190 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_0339 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Pcryo_0145 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:pcr01006] D Pcryo_2228 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Pcryo_1756 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Pcryo_1712 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Pcryo_1494 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Pcryo_1980 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:pcr01007] D Pcryo_2381 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pcryo_0665 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Pcryo_2341 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Pcryo_2269 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pcryo_1750 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Pcryo_1003 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Pcryo_2239 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pcryo_1596 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Pcryo_0402 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Pcryo_2138 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Pcryo_0566 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pcryo_1409 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Pcryo_1183 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pcryo_0653 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Pcryo_2056 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Pcryo_2055 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Pcryo_1850 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Pcryo_0463 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Pcryo_2417 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Pcryo_1638 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Pcryo_2299 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Pcryo_2298 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Pcryo_2440 aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D Pcryo_0692 transcriptional regulator, XRE family K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Pcryo_1557 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pcryo_0439 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Pcryo_1205 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_2191 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_0738 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pcryo_2454 aminotransferase, class I and II K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Pcryo_0012 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Pcryo_1405 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Pcryo_0819 4-aminobutyrate aminotransferase apoenzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pcryo_0361 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Pcryo_0171 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Pcryo_1176 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pcryo_0981 serine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Pcryo_1434 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Pcryo_0616 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Pcryo_0618 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pcr00194] D Pcryo_2326 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Pcryo_2327 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Pcryo_2328 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Pcryo_2329 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Pcryo_2330 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Pcryo_2331 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Pcryo_2332 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Pcryo_2333 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Pcryo_2334 putative ATP synthase protein, subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pcr03000] D Pcryo_0254 transcriptional regulator, AraC family K21747 alkR; AraC family transcriptional regulator, alkane utilization regulator D Pcryo_0236 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Pcryo_2079 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Pcryo_1155 transcriptional regulator, LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D Pcryo_1556 transcriptional regulator, LysR family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D Pcryo_1313 transcriptional regulator, LysR family K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D Pcryo_1271 transcriptional regulator, LysR family K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D Pcryo_1929 transcriptional regulator, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D Pcryo_1823 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Pcryo_1914 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Pcryo_1014 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Pcryo_0969 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Pcryo_1536 transcriptional regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D Pcryo_1161 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pcryo_0356 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pcryo_2137 hypothetical protein K16247 gutR; LuxR family transcriptional regulator, glucitol operon activator D Pcryo_0291 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Pcryo_2336 putative ferric uptake regulator, FUR family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Pcryo_1785 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D Pcryo_0817 transcriptional regulator, IclR family K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor D Pcryo_1655 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Pcryo_1523 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D Pcryo_1386 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Pcryo_1466 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Pcryo_0346 biotin/lipoate A/B protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Pcryo_1650 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Pcryo_1922 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D Pcryo_2058 transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Pcryo_0823 Cupin 2, conserved barrel K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D Pcryo_0963 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Pcryo_1138 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Pcryo_2510 RelB antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D Pcryo_2063 transcriptional regulator, BolA protein family K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Pcryo_1059 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pcryo_2057 phage shock protein C, PspC K03973 pspC; phage shock protein C D Pcryo_1618 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein D Pcryo_2358 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein D Pcryo_0062 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator D Pcryo_2340 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Pcryo_0680 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Pcryo_2471 Protein of unknown function DUF193 K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:pcr03021] D Pcryo_0509 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Pcryo_2177 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Pcryo_2176 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Pcryo_2004 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Pcryo_1124 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Pcryo_0227 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor D Pcryo_0223 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Pcryo_2286 helicase-like protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D Pcryo_0073 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Pcryo_2393 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Pcryo_2182 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Pcryo_1586 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A D Pcryo_1587 Stringent starvation protein B K03600 sspB; stringent starvation protein B D Pcryo_2340 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Pcryo_0680 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Pcryo_0828 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D Pcryo_2293 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:pcr03019] D Pcryo_0282 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Pcryo_0482 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Pcryo_0367 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Pcryo_2420 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Pcryo_0321 cold-shock DNA-binding domain protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D Pcryo_1734 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Pcryo_1474 DEAD/DEAH box helicase-like protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Pcryo_1870 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pcryo_0080 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Pcryo_2293 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Pcryo_2456 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Pcryo_0541 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pcryo_1493 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Pcryo_1882 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Pcryo_1067 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Pcryo_0123 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Pcryo_2310 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Pcryo_1640 carbon storage regulator, CsrA / carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Pcryo_1665 Protein of unknown function 1935 K02553 rraA; regulator of ribonuclease activity A D Pcryo_0127 Uncharacterized P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ D Pcryo_1419 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:pcr03011] D Pcryo_1673 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Pcryo_0389 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Pcryo_0490 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Pcryo_0508 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Pcryo_0501 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Pcryo_1032 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Pcryo_2186 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Pcryo_0498 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Pcryo_1748 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Pcryo_0483 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Pcryo_0507 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Pcryo_2187 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Pcryo_0506 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Pcryo_0497 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Pcryo_0079 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Pcryo_2322 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Pcryo_0493 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Pcryo_1031 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Pcryo_0488 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Pcryo_1667 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Pcryo_0231 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Pcryo_2180 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Pcryo_0487 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Pcryo_0484 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Pcryo_0485 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Pcryo_0496 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Pcryo_0499 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Pcryo_1030 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Pcryo_2179 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Pcryo_2181 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Pcryo_2178 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Pcryo_1747 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Pcryo_0494 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Pcryo_0503 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Pcryo_0491 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Pcryo_0510 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Pcryo_0500 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Pcryo_2319 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Pcryo_2300 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Pcryo_1755 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Pcryo_0489 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Pcryo_0486 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Pcryo_0495 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Pcryo_1754 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Pcryo_1989 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Pcryo_0492 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Pcryo_0502 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Pcryo_2207 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Pcryo_0514 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Pcryo_1990 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Pcryo_0002 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Pcryo_2301 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Pcryo_0505 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Pcryo_0184 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Pcryo_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0056 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0052 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0049 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0057 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pcr03009] D Pcryo_0367 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Pcryo_1734 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Pcryo_0368 GTP-binding protein Era K03595 era; GTPase D Pcryo_1683 GTP1/OBG subdomain protein K03979 obgE; GTPase [EC:3.6.5.-] D Pcryo_2340 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Pcryo_0680 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Pcryo_0073 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Pcryo_2393 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Pcryo_2182 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Pcryo_0031 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Pcryo_1456 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Pcryo_2466 Fmu (Sun) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Pcryo_0055 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Pcryo_1746 conserved hypothetical protein 95 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Pcryo_1450 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Pcryo_1729 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Pcryo_1057 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Pcryo_2380 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Pcryo_2199 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Pcryo_1982 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D Pcryo_2374 23S rRNA m(1)G-745 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Pcryo_0065 23S rRNA Gm-2251 2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Pcryo_2021 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Pcryo_0008 23S rRNA m(6)A-1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D Pcryo_0433 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Pcryo_0551 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D Pcryo_0772 putative RNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D Pcryo_0648 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Pcryo_0378 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Pcryo_2291 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Pcryo_0608 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Pcryo_0283 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Pcryo_1127 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Pcryo_0313 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D Pcryo_0908 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D Pcryo_0426 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Pcryo_2321 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Pcryo_1715 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Pcryo_1648 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Pcryo_1636 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Pcryo_1144 Cupin 4 K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D Pcryo_0282 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Pcryo_0482 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Pcryo_0061 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Pcryo_1735 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Pcryo_0656 Small GTP-binding protein domain protein K03977 engA; GTPase D Pcryo_2283 Ras superfamily GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D Pcryo_0396 GTP-binding protein, HSR1-related protein K03665 hflX; GTPase D Pcryo_2462 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Pcryo_2005 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Pcryo_0075 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Pcryo_0072 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Pcryo_0214 Iojap-related protein K09710 ybeB; ribosome-associated protein D Pcryo_0590 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Pcryo_2022 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Pcryo_0128 conserved hypothetical protein K09889 yjgA; ribosome-associated protein D Pcryo_0224 SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor D Pcryo_1524 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase D Pcryo_0513 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pcr03016] D Pcryo_1720 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Pcryo_2045 conserved hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D Pcryo_0321 cold-shock DNA-binding domain protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D Pcryo_0996 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Pcryo_2381 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pcryo_0463 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Pcryo_0402 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Pcryo_0566 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pcryo_1596 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Pcryo_0665 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Pcryo_2239 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pcryo_1409 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Pcryo_1183 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pcryo_1638 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Pcryo_2417 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Pcryo_1850 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Pcryo_1003 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Pcryo_2138 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Pcryo_0653 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Pcryo_2299 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Pcryo_2298 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Pcryo_2269 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pcryo_1750 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Pcryo_2217 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Pcryo_1076 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Pcryo_2013 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Pcryo_1403 putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Pcryo_1534 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Pcryo_1568 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Pcryo_0076 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Pcryo_1971 Pseudouridylate synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Pcryo_1656 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pcryo_2462 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Pcryo_1494 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Pcryo_2472 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Pcryo_1152 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Pcryo_0001 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Pcryo_R0011 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Pcryo_1866 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-] D Pcryo_2154 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Pcryo_0801 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D Pcryo_0144 ABC transporter related protein K06020 ettA; energy-dependent translational throttle protein EttA D Pcryo_2056 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Pcryo_2055 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Pcryo_2341 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Pcryo_0146 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Pcryo_1675 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Pcryo_0795 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Pcryo_1078 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Pcryo_2307 tRNA-U20a,U20b-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D Pcryo_2047 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Pcryo_2242 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Pcryo_2241 methyltransferase, putative K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D Pcryo_1725 Methyltransferase type 11 K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D Pcryo_2320 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Pcryo_1212 tRNA/rRNA methyltransferase (SpoU) K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D Pcryo_1170 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Pcryo_0529 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Pcryo_1821 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D Pcryo_2291 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Pcryo_1148 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Pcryo_0778 PP-loop K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Pcryo_0059 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Pcryo_1174 DsrE-like protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Pcryo_1171 putative DsrC-like protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Pcryo_1658 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D Pcryo_0169 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ D Pcryo_1879 tRNA--hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D Pcryo_1977 protein of unknown function DUF752 K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D Pcryo_1564 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Pcryo_0777 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Pcryo_1497 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Pcryo_0724 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Pcryo_0462 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Pcryo_0519 4Fe-4S cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Pcryo_1703 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Pcryo_0175 tRNA(Ile)-lysidine synthetase-like protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Pcryo_1984 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Pcryo_0234 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Pcryo_1496 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Pcryo_1952 UBA/THIF-type NAD/FAD binding fold protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Pcryo_2420 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Pcryo_0080 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pcr03012] D Pcryo_0074 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Pcryo_2418 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Pcryo_0045 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Pcryo_0390 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Pcryo_0425 translation elongation factor Tu K02358 tuf; elongation factor Tu D Pcryo_2184 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Pcryo_2185 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Pcryo_1411 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D Pcryo_1713 ribosome recycling factor K02838 frr; ribosome recycling factor D Pcryo_1157 [protein release factor]-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Pcryo_0183 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Pcryo_1569 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Pcryo_1950 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Pcryo_0299 Lysine--tRNA ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D Pcryo_1949 L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D Pcryo_0512 protein of unknown function DUF462 K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D Pcryo_0834 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 D Pcryo_0422 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3 D Pcryo_0867 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:pcr03110] D Pcryo_1677 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Pcryo_0841 ATPase AAA-2 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Pcryo_2235 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Pcryo_1998 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Pcryo_2456 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Pcryo_1660 Heat shock protein 70 K04044 hscA; molecular chaperone HscA D Pcryo_0541 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pcryo_0034 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Pcryo_0047 heat shock protein DnaJ-like protein K05516 cbpA; curved DNA-binding protein D Pcryo_1659 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Pcryo_0333 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Pcryo_2457 GrpE protein K03687 GRPE; molecular chaperone GrpE D Pcryo_1468 heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D Pcryo_0540 chaperonin Cpn10 K04078 groES; chaperonin GroES D Pcryo_0157 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Pcryo_2020 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Pcryo_2333 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Pcryo_1830 P pilus assembly protein chaperone PapD-like protein K07346 fimC; fimbrial chaperone protein D Pcryo_1738 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Pcryo_1222 protein of unknown function, Spy-related protein K06006 cpxP; periplasmic protein CpxP/Spy D Pcryo_0664 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Pcryo_2159 Cof protein K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Pcryo_1652 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Pcryo_2406 peptidylprolyl isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D Pcryo_0399 peptidylprolyl isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D Pcryo_0310 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Pcryo_1818 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Pcryo_1699 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Pcryo_2292 thioredoxin K03671 TXN; thioredoxin D Pcryo_2066 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D Pcryo_1737 Glutaredoxin, GrxC K03676 grxC; glutaredoxin 3 D Pcryo_1150 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin D Pcryo_0129 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Pcryo_0042 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Pcryo_0280 putative thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Pcryo_0032 conserved hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Pcryo_0259 cytochrome c biogenesis protein, transmembrane region K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Pcryo_1349 periplasmic protein thiol K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D Pcryo_1742 periplasmic protein thiol K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:pcr04131] D Pcryo_0647 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Pcryo_1297 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Pcryo_0092 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Pcryo_1684 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pcryo_1842 Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pcryo_1998 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:pcr04121] C 03051 Proteasome [BR:pcr03051] D Pcryo_1998 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:pcr03032] D Pcryo_1653 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Pcryo_2297 histone-like DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Pcryo_1672 histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D Pcryo_0003 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Pcryo_1459 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Pcryo_1125 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Pcryo_1958 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Pcryo_1214 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pcryo_0004 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pcryo_0050 putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pcryo_0564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pcryo_1065 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pcryo_0437 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pcryo_0855 DNA polymerase III, epsilon subunit K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D Pcryo_1407 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pcryo_1505 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Pcryo_0419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pcryo_0351 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pcryo_1854 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein D Pcryo_1724 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Pcryo_0006 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Pcryo_2157 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Pcryo_2414 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Pcryo_1901 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Pcryo_0837 DNA topoisomerase, type I, putative K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pcr03036] D Pcryo_0367 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Pcryo_0092 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Pcryo_1957 nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS D Pcryo_1653 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Pcryo_2297 histone-like DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Pcryo_1672 histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D Pcryo_0047 heat shock protein DnaJ-like protein K05516 cbpA; curved DNA-binding protein D Pcryo_0048 conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D Pcryo_0003 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Pcryo_1852 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein D Pcryo_0735 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein D Pcryo_1650 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Pcryo_1493 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Pcryo_1161 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pcryo_0356 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pcryo_0349 SMC protein-like protein K03529 smc; chromosome segregation protein D Pcryo_1751 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D Pcryo_1752 condensin subunit ScpB K06024 scpB; segregation and condensation protein B D Pcryo_2028 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Pcryo_1869 cell division protein FtsB K05589 ftsB; cell division protein FtsB D Pcryo_2378 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pcryo_0430 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Pcryo_2379 conserved hypothetical protein K03586 ftsL; cell division protein FtsL D Pcryo_2029 putative cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D Pcryo_2342 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D Pcryo_2027 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Pcryo_0350 putative cell division protein K03528 zipA; cell division protein ZipA D Pcryo_2053 cell division protein ZapA K09888 zapA; cell division protein ZapA D Pcryo_1094 AFG1-like ATPase K06916 zapE; cell division protein ZapE D Pcryo_1757 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Pcryo_2090 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Pcryo_2091 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Pcryo_2092 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Pcryo_0478 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Pcryo_0479 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Pcryo_0480 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Pcryo_1485 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA D Pcryo_1058 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Pcryo_2485 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Pcryo_1059 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pcryo_2157 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Pcryo_2414 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Pcryo_1152 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Pcryo_1057 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Pcryo_0221 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC D Pcryo_0057 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Pcryo_1590 Cobyrinic acid a,c-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning D Pcryo_0285 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pcr03400] D Pcryo_1480 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Pcryo_0465 deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Pcryo_1676 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Pcryo_0162 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Pcryo_2284 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Pcryo_0851 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Pcryo_1686 8-oxo-dGTPase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Pcryo_0570 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Pcryo_1445 HhH-GPD K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Pcryo_0376 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Pcryo_1192 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Pcryo_0720 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Pcryo_0351 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pcryo_0419 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pcryo_1960 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Pcryo_0866 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Pcryo_0737 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Pcryo_2316 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Pcryo_1017 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Pcryo_2177 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Pcryo_2176 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Pcryo_0509 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Pcryo_2004 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Pcryo_1664 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Pcryo_0273 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Pcryo_1495 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Pcryo_1091 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Pcryo_1090 conserved hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Pcryo_2213 Exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D Pcryo_1214 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pcryo_0004 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pcryo_0050 putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pcryo_0564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pcryo_1065 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pcryo_0437 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pcryo_0855 DNA polymerase III, epsilon subunit K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D Pcryo_1407 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pcryo_1958 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Pcryo_1291 UvrD/REP helicase K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Pcryo_1290 putative exoribodeoxynuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Pcryo_1292 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Pcryo_2014 recA protein K03553 recA; recombination protein RecA D Pcryo_0684 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Pcryo_0685 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Pcryo_0671 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Pcryo_2007 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Pcryo_1399 SMC protein-like protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Pcryo_1398 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D Pcryo_1487 DNA replication and repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Pcryo_0005 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Pcryo_2402 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Pcryo_0369 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Pcryo_0800 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Pcryo_0063 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Pcryo_1724 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Pcryo_0006 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Pcryo_1901 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Pcryo_0837 DNA topoisomerase, type I, putative K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Pcryo_1653 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Pcryo_1650 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Pcryo_2297 histone-like DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Pcryo_1672 histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D Pcryo_1957 nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS D Pcryo_1563 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Pcryo_2015 putative inhibitor/regulator of RecA, RecX K03565 recX; regulatory protein D Pcryo_0572 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Pcryo_2360 UvrD/REP helicase K03658 helD; DNA helicase IV [EC:5.6.2.4] D Pcryo_1122 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pcryo_1117 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:pcr03029] D Pcryo_1584 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Pcryo_0074 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Pcryo_2418 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Pcryo_0390 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Pcryo_0425 translation elongation factor Tu K02358 tuf; elongation factor Tu D Pcryo_2184 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Pcryo_2185 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Pcryo_0368 GTP-binding protein Era K03595 era; GTPase D Pcryo_2269 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pcryo_0566 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pcryo_1183 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pcryo_2239 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pcryo_0476 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Pcryo_0475 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Pcryo_0477 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Pcryo_2350 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D Pcryo_1958 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Pcryo_1708 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Pcryo_2456 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Pcryo_2457 GrpE protein K03687 GRPE; molecular chaperone GrpE D Pcryo_0541 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pcryo_0540 chaperonin Cpn10 K04078 groES; chaperonin GroES D Pcryo_0034 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Pcryo_1656 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pcryo_1659 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Pcryo_1150 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin D Pcryo_1590 Cobyrinic acid a,c-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning D Pcryo_2473 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pcryo_1998 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pcr02000] D Pcryo_1062 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Pcryo_0090 ABC transporter related protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Pcryo_0562 ABC transporter related protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D Pcryo_1582 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein D Pcryo_1390 Thiosulphate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Pcryo_1391 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Pcryo_1389 Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Pcryo_1388 Sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Pcryo_1387 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Pcryo_0706 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Pcryo_0705 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Pcryo_1728 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Pcryo_1727 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Pcryo_1726 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Pcryo_2162 extracellular solute-binding protein, family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Pcryo_0237 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Pcryo_0238 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Pcryo_0239 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Pcryo_1086 Substrate-binding region of ABC-type glycine betaine transport system K02001 proW; glycine betaine/proline transport system permease protein D Pcryo_1087 Quaternary-amine-transporting ATPase K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Pcryo_0976 putative ABC-type transport system, periplasmic component K05777 ynjB; putative thiamine transport system substrate-binding protein D Pcryo_0975 binding-protein-dependent transport systems inner membrane component K05778 ynjC; putative thiamine transport system permease protein D Pcryo_0974 ABC transporter related protein K05779 ynjD; putative thiamine transport system ATP-binding protein D Pcryo_2219 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Pcryo_2220 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Pcryo_2221 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Pcryo_2222 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Pcryo_0334 L-glutamate-binding protein / L-aspartate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D Pcryo_0336 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein K10002 gltK; glutamate/aspartate transport system permease protein D Pcryo_0335 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein K10003 gltJ; glutamate/aspartate transport system permease protein D Pcryo_0337 L-glutamate ABC transporter ATP-binding protein / L-aspartate ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D Pcryo_1928 amino acid ABC transporter substrate-binding protein, PAAT family K02424 tcyA; L-cystine transport system substrate-binding protein D Pcryo_1927 amino acid ABC transporter membrane protein, PAAT family K10009 tcyB; L-cystine transport system permease protein D Pcryo_1926 amino acid ABC transporter ATP-binding protein, PAAT family K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Pcryo_2107 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Pcryo_2106 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Pcryo_2105 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D Pcryo_0994 amino acid/amide ABC transporter substrate-binding protein, HAAT family K11959 urtA; urea transport system substrate-binding protein D Pcryo_0993 amino acid/amide ABC transporter membrane protein 1, HAAT family K11960 urtB; urea transport system permease protein D Pcryo_0992 amino acid/amide ABC transporter membrane protein 2, HAAT family K11961 urtC; urea transport system permease protein D Pcryo_0991 ABC transporter related protein K11962 urtD; urea transport system ATP-binding protein D Pcryo_0990 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K11963 urtE; urea transport system ATP-binding protein D Pcryo_1599 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Pcryo_1598 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Pcryo_1600 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein D Pcryo_1601 ABC transporter related protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D Pcryo_0326 amino acid ABC transporter substrate-binding protein, PAAT family K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D Pcryo_0327 amino acid ABC transporter substrate-binding protein, PAAT family K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D Pcryo_0325 amino acid ABC transporter substrate-binding protein, PAAT family K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D Pcryo_0328 amino acid ABC transporter membrane protein 1, PAAT family K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D Pcryo_0329 amino acid ABC transporter membrane protein 2, PAAT family K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D Pcryo_0324 amino acid ABC transporter ATP-binding protein, PAAT family K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D Pcryo_0384 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Pcryo_0759 extracellular solute-binding protein, family 5 K12368 dppA; dipeptide transport system substrate-binding protein D Pcryo_0758 binding-protein-dependent transport systems inner membrane component K12369 dppB; dipeptide transport system permease protein D Pcryo_0757 binding-protein-dependent transport systems inner membrane component K12370 dppC; dipeptide transport system permease protein D Pcryo_0756 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K12371 dppD; dipeptide transport system ATP-binding protein D Pcryo_0755 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K12372 dppF; dipeptide transport system ATP-binding protein D Pcryo_1433 extracellular solute-binding protein, family 5 K13893 yejA; microcin C transport system substrate-binding protein D Pcryo_1431 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein D Pcryo_1430 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein D Pcryo_1429 ABC transporter related protein K13896 yejF; microcin C transport system ATP-binding protein D Pcryo_1282 periplasmic binding protein K23181 fecB; ferric citrate transport system substrate-binding protein D Pcryo_1284 transport system permease protein K23182 fecD; ferric citrate transport system permease protein D Pcryo_1283 transport system permease protein K23183 fecC; ferric citrate transport system permease protein D Pcryo_1285 ABC transporter related protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D Pcryo_1907 periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D Pcryo_1909 transport system permease protein K25283 yclO; iron-siderophore transport system permease protein D Pcryo_1908 transport system permease protein K25284 yclN; iron-siderophore transport system permease protein D Pcryo_1910 ABC transporter related protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D Pcryo_2335 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Pcryo_2338 ABC-3 K09816 znuB; zinc transport system permease protein D Pcryo_2337 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Pcryo_0053 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein D Pcryo_0054 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein D Pcryo_1488 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Pcryo_0787 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Pcryo_0788 Lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Pcryo_2110 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D Pcryo_2111 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D Pcryo_2112 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B D Pcryo_2113 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Pcryo_0461 ABC-2 K01992 ABC-2.P; ABC-2 type transport system permease protein D Pcryo_1038 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Pcryo_1037 ABC-2 K01992 ABC-2.P; ABC-2 type transport system permease protein D Pcryo_0460 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Pcryo_2436 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Pcryo_2435 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Pcryo_1421 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Pcryo_1166 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Pcryo_0022 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Pcryo_1106 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Pcryo_1232 major facilitator superfamily MFS_1 K08196 mucK; MFS transporter, AAHS family, cis,cis-muconate transporter D Pcryo_1257 major facilitator superfamily MFS_1 K05548 benK; MFS transporter, AAHS family, benzoate transport protein D Pcryo_2433 major facilitator superfamily MFS_1 K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D Pcryo_1320 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Pcryo_1156 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Pcryo_0383 Drug resistance transporter Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Pcryo_0868 major facilitator superfamily MFS_1 K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D Pcryo_1520 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Pcryo_1478 Ion transport protein K10716 kch; voltage-gated potassium channel D Pcryo_1053 Ion transport protein K10716 kch; voltage-gated potassium channel D Pcryo_2347 ammonium transporter K03320 amt; ammonium transporter, Amt family D Pcryo_0878 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pcryo_1722 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pcryo_2073 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pcryo_1010 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pcryo_1586 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A D Pcryo_0374 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Pcryo_0589 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Pcryo_2422 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Pcryo_0773 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Pcryo_1446 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein D Pcryo_0571 magnesium transporter K06213 mgtE; magnesium transporter D Pcryo_1905 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Pcryo_1060 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Pcryo_1248 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Pcryo_1061 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Pcryo_1904 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D Pcryo_1249 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D Pcryo_1136 Cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ D Pcryo_1135 Cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR D Pcryo_0642 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Pcryo_0235 camphor resistance protein CrcB K06199 crcB; fluoride exporter D Pcryo_1229 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein D Pcryo_1110 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Pcryo_0295 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Pcryo_2453 OmpA-like transmembrane region K16079 omp31; outer membrane immunogenic protein D Pcryo_0307 OmpA/MotB K16191 K16191; peptidoglycan-binding protein ArfA D Pcryo_0372 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Pcryo_0594 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Pcryo_0595 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Pcryo_0596 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Pcryo_0597 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Pcryo_1579 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Pcryo_1580 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Pcryo_1831 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D Pcryo_0877 Outer membrane autotransporter barrel K12686 apeE; outer membrane lipase/esterase D Pcryo_1280 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein D Pcryo_1447 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D Pcryo_1912 TonB-dependent heme/hemoglobin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Pcryo_1281 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Pcryo_1759 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system D Pcryo_0609 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Pcryo_1708 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Pcryo_0655 Pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB D Pcryo_1126 putative lipoprotein (DUF0169) K05807 bamD; outer membrane protein assembly factor BamD D Pcryo_0290 SmpA/OmlA K06186 bamE; outer membrane protein assembly factor BamE D Pcryo_1689 surface antigen (D15) K07278 tamA; translocation and assembly module TamA D Pcryo_1688 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB D Pcryo_1225 YadA-like protein K21449 ata; trimeric autotransporter adhesin D Pcryo_1489 OstA-like protein K09774 lptA; lipopolysaccharide export system protein LptA D Pcryo_1490 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC D Pcryo_1698 putative organic solvent tolerance protein K04744 lptD; LPS-assembly protein D Pcryo_0565 conserved hypothetical protein K03643 lptE; LPS-assembly lipoprotein D Pcryo_2277 CBS domain protein K06189 corC; hemolysin (HlyC) family protein D Pcryo_2008 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Pcryo_1758 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Pcryo_0871 small multidrug resistance protein K03297 emrE; small multidrug resistance pump D Pcryo_1376 protein of unknown function DUF6, transmembrane K15268 eamA; O-acetylserine/cysteine efflux transporter D Pcryo_0357 rarD protein K05786 rarD; chloramphenicol-sensitive protein RarD D Pcryo_1207 rarD protein K05786 rarD; chloramphenicol-sensitive protein RarD D Pcryo_1723 rarD protein K05786 rarD; chloramphenicol-sensitive protein RarD D Pcryo_1329 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Pcryo_1328 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Pcryo_1341 protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein D Pcryo_1498 protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein D Pcryo_1898 Na+/H+ antiporter NhaC K07084 yuiF; putative amino acid transporter D Pcryo_1025 predicted D-glycerate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D Pcryo_1888 L-lactate transport K03303 lutP; lactate permease D Pcryo_1813 BCCT transporter K05020 opuD; glycine betaine transporter D Pcryo_1077 choline/carnitine/betaine transport K02168 betT; choline/glycine/proline betaine transport protein D Pcryo_0845 choline/carnitine/betaine transport K02168 betT; choline/glycine/proline betaine transport protein D Pcryo_0875 choline/carnitine/betaine transport K02168 betT; choline/glycine/proline betaine transport protein D Pcryo_0181 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter D Pcryo_2254 Na+/solute symporter K14393 actP; cation/acetate symporter D Pcryo_0049 sodium:dicarboxylate symporter K07862 sstT; serine/threonine transporter D Pcryo_0319 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D Pcryo_2123 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family D Pcryo_0896 transporter, NhaC family K03315 nhaC; Na+:H+ antiporter, NhaC family D Pcryo_1552 transporter, NhaC family K03315 nhaC; Na+:H+ antiporter, NhaC family D Pcryo_1073 sodium/proton antiporter, CPA1 family K24160 NHA1; sodium/hydrogen antiporter D Pcryo_2517 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter D Pcryo_0966 potassium/proton antiporter, CPA1 family K11105 cvrA; potassium/hydrogen antiporter D Pcryo_0534 sodium/proton antiporter, CPA1 family K03316 nhaP; Na+:H+ antiporter D Pcryo_2011 Kef-type potassium/proton antiporter, CPA2 family K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D Pcryo_1835 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Pcryo_1834 TrkA-N K03499 trkA; trk/ktr system potassium uptake protein D Pcryo_1196 uracil-xanthine permease K09016 rutG; putative pyrimidine permease RutG D Pcryo_1300 uracil-xanthine permease K24206 uacT; uric acid transporter D Pcryo_1913 uracil-xanthine permease K16345 xanP; xanthine permease XanP D Pcryo_1137 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Pcryo_1263 benzoate transporter K05782 benE; benzoate membrane transport protein D Pcryo_1783 benzoate transporter K05782 benE; benzoate membrane transport protein D Pcryo_0890 Chromate transporter K07240 chrA; chromate transporter D Pcryo_2344 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family D Pcryo_2069 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family D Pcryo_2261 TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Pcryo_0911 TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Pcryo_1297 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Pcryo_1463 arsenite efflux membrane protein ArsB (TC 3.A.4.1.1; TC 2.A.45.1.1) K03893 arsB; arsenical pump membrane protein D Pcryo_2039 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Pcryo_1153 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins D Pcryo_0604 Lysine exporter protein (LYSE/YGGA) K06895 lysE; L-lysine exporter family protein LysE/ArgO D Pcryo_2048 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein D Pcryo_0009 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein D Pcryo_1105 AzlC-like protein K26605 azlC; branched chain amino acid efflux pump D Pcryo_1104 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Pcryo_1827 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Pcryo_1826 membrane protein TctB, putative K07794 tctB; putative tricarboxylic transport membrane protein D Pcryo_1825 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein D Pcryo_0603 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Pcryo_2342 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D Pcryo_0007 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein D Pcryo_1339 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein D Pcryo_0588 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Pcryo_1509 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Pcryo_0471 Peptidoglycan-binding LysM K03646 tolA; colicin import membrane protein D Pcryo_1133 TolB-like protein K03641 tolB; TolB protein D Pcryo_0446 WD-40 repeat-containing protein K03641 tolB; TolB protein D Pcryo_1757 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Pcryo_0563 secretion protein HlyD K13888 macA; membrane fusion protein, macrolide-specific efflux system D Pcryo_0611 Protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Pcryo_1413 Nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Pcryo_2059 Nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Pcryo_1169 Entericidin EcnAB K16348 ecnB; entericidin B D Pcryo_1348 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Pcryo_1743 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Pcryo_0205 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D Pcryo_2508 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D Pcryo_1916 Transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Pcryo_1891 MltA-interacting MipA K07274 mipA; MipA family protein C 02044 Secretion system [BR:pcr02044] D Pcryo_1955 putative general secretion pathway protein K02452 gspC; general secretion pathway protein C D Pcryo_1954 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D Pcryo_0249 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Pcryo_1533 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Pcryo_0256 General secretion pathway protein F K02455 gspF; general secretion pathway protein F D Pcryo_0257 General secretion pathway protein G K02456 gspG; general secretion pathway protein G D Pcryo_1529 General secretion pathway protein I K02458 gspI; general secretion pathway protein I D Pcryo_1528 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J D Pcryo_1527 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D Pcryo_1098 hypothetical protein K02461 gspL; general secretion pathway protein L D Pcryo_1956 putative general secretion pathway protein K02463 gspN; general secretion pathway protein N D Pcryo_0067 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Pcryo_0271 putative pilin protein PilA K02650 pilA; type IV pilus assembly protein PilA D Pcryo_0269 Fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA D Pcryo_0069 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Pcryo_0068 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Pcryo_0267 putative pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D Pcryo_0268 putative pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D Pcryo_0650 TPR repeat protein K02656 pilF; type IV pilus assembly protein PilF D Pcryo_2101 response regulator receiver domain protein (CheY-like) K02657 pilG; twitching motility two-component system response regulator PilG D Pcryo_2100 response regulator receiver domain protein (CheY-like) K02658 pilH; twitching motility two-component system response regulator PilH D Pcryo_2099 CheW protein K02659 pilI; twitching motility protein PilI D Pcryo_2098 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D Pcryo_2097 MCP methyltransferase, CheR-type K02661 pilK; type IV pilus assembly protein PilK D Pcryo_2173 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Pcryo_2172 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN D Pcryo_2171 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO D Pcryo_2170 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP D Pcryo_2169 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D Pcryo_0293 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Pcryo_0292 twitching motility protein K02670 pilU; twitching motility protein PilU D Pcryo_0263 putative type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV D Pcryo_0264 putative pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D Pcryo_0266 putative pilus assembly protein tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D Pcryo_1066 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Pcryo_0262 putative pilin protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT D Pcryo_0371 pilus assembly protein FimT-like protein K08084 fimT; type IV fimbrial biogenesis protein FimT D Pcryo_1566 conserved hypothetical protein K08086 fimV; pilus assembly protein FimV D Pcryo_1565 conserved hypothetical protein K08086 fimV; pilus assembly protein FimV D Pcryo_0178 protein of unknown function YGGT K02221 yggT; YggT family protein D Pcryo_0122 Competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA D Pcryo_0791 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D Pcryo_0280 putative thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Pcryo_0032 conserved hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Pcryo_0877 Outer membrane autotransporter barrel K12686 apeE; outer membrane lipase/esterase D Pcryo_1830 P pilus assembly protein chaperone PapD-like protein K07346 fimC; fimbrial chaperone protein D Pcryo_1831 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D Pcryo_1832 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pcryo_1829 putative signal peptide protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pcryo_0274 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Pcryo_1738 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Pcryo_1108 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Pcryo_2183 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Pcryo_1107 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Pcryo_0071 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Pcryo_0504 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Pcryo_1985 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Pcryo_1481 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Pcryo_1109 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Pcryo_2473 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pcryo_2303 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Pcryo_1776 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Pcryo_2304 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Pcryo_2305 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:pcr02042] D Pcryo_1110 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Pcryo_0295 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:pcr02022] D Pcryo_2215 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Pcryo_2216 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Pcryo_2323 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Pcryo_0135 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Pcryo_2324 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Pcryo_2325 two component transcriptional regulator, winged helix family K07661 rstA; two-component system, OmpR family, response regulator RstA D Pcryo_1224 periplasmic sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Pcryo_0703 signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Pcryo_0702 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Pcryo_1223 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Pcryo_0381 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Pcryo_0677 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Pcryo_0764 histidine kinase internal region K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D Pcryo_0765 transcriptional regulator, LytR/AlgR family K07705 lytT; two-component system, LytTR family, response regulator LytT D Pcryo_0096 histidine kinase internal region K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D Pcryo_0097 transcriptional regulator, LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR D Pcryo_1716 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Pcryo_1717 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Pcryo_0676 periplasmic sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Pcryo_0675 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Pcryo_2287 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Pcryo_0385 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pcryo_0386 response regulator receiver domain protein (CheY-like) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Pcryo_2096 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Pcryo_2101 response regulator receiver domain protein (CheY-like) K02657 pilG; twitching motility two-component system response regulator PilG D Pcryo_2100 response regulator receiver domain protein (CheY-like) K02658 pilH; twitching motility two-component system response regulator PilH D Pcryo_2095 CheB methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D Pcryo_0657 periplasmic sensor signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Pcryo_1951 GAF sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Pcryo_1213 Hpt domain protein K20976 hptB; histidine phosphotransfer protein HptB C 02035 Bacterial motility proteins [BR:pcr02035] D Pcryo_0385 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pcryo_0387 CheC-like family protein K03409 cheX; chemotaxis protein CheX D Pcryo_0388 hypothetical protein K03409 cheX; chemotaxis protein CheX D Pcryo_0386 response regulator receiver domain protein (CheY-like) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Pcryo_1928 amino acid ABC transporter substrate-binding protein, PAAT family K02424 tcyA; L-cystine transport system substrate-binding protein D Pcryo_2101 response regulator receiver domain protein (CheY-like) K02657 pilG; twitching motility two-component system response regulator PilG D Pcryo_2100 response regulator receiver domain protein (CheY-like) K02658 pilH; twitching motility two-component system response regulator PilH D Pcryo_2099 CheW protein K02659 pilI; twitching motility protein PilI D Pcryo_2098 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D Pcryo_2097 MCP methyltransferase, CheR-type K02661 pilK; type IV pilus assembly protein PilK D Pcryo_2096 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Pcryo_0675 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Pcryo_0676 periplasmic sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Pcryo_0293 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Pcryo_0292 twitching motility protein K02670 pilU; twitching motility protein PilU D Pcryo_2095 CheB methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D Pcryo_0271 putative pilin protein PilA K02650 pilA; type IV pilus assembly protein PilA D Pcryo_0269 Fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA D Pcryo_0069 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Pcryo_0068 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Pcryo_0067 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Pcryo_0650 TPR repeat protein K02656 pilF; type IV pilus assembly protein PilF D Pcryo_2169 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D Pcryo_2170 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP D Pcryo_2171 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO D Pcryo_2172 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN D Pcryo_2173 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Pcryo_1066 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Pcryo_0263 putative type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV D Pcryo_0264 putative pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D Pcryo_0266 putative pilus assembly protein tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D Pcryo_0267 putative pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D Pcryo_0268 putative pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D Pcryo_1830 P pilus assembly protein chaperone PapD-like protein K07346 fimC; fimbrial chaperone protein D Pcryo_1831 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D Pcryo_1832 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pcryo_1829 putative signal peptide protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pcr04812] D Pcryo_0478 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Pcryo_2027 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Pcryo_2028 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Pcryo_2090 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Pcryo_2091 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Pcryo_2092 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Pcryo_1058 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Pcryo_2485 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Pcryo_1059 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pcr04147] D Pcryo_1998 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Pcryo_0092 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Pcryo_1870 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pcryo_1684 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pcryo_1842 Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pcryo_0681 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Pcryo_1814 peptidase M19, renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Pcryo_0541 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pcryo_2456 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Pcryo_0118 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pcryo_1005 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Pcryo_0425 translation elongation factor Tu K02358 tuf; elongation factor Tu D Pcryo_2184 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Pcryo_1076 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Pcryo_2156 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1189 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1190 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Pcryo_1068 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_0278 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1538 Acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Pcryo_1448 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Pcryo_1739 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Pcryo_1201 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Pcryo_0095 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Pcryo_1864 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Pcryo_1558 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Pcryo_0530 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pcryo_1041 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Pcryo_1440 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pcryo_1760 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Pcryo_1555 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Pcryo_1553 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Pcryo_0140 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Pcryo_0410 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pcryo_1651 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Pcryo_0113 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0774 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pcryo_0528 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Pcryo_0070 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Pcryo_1685 Lipocalin-like protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:pcr02048] D Pcryo_1362 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Pcryo_0948 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Pcryo_2363 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Pcryo_1360 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Pcryo_0951 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Pcryo_2364 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Pcryo_1359 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Pcryo_0952 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Pcryo_2365 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Pcryo_2366 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Pcryo_0153 putative type II restriction endonuclease DpnI K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D Pcryo_0017 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Pcryo_0939 ATPase associated with various cellular activities, AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D Pcryo_0252 ATPase associated with various cellular activities, AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D Pcryo_0940 putative McrC protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D Pcryo_0253 conserved hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D Pcryo_1119 Addiction module toxin, RelE/StbE K06218 relE; mRNA interferase RelE/StbE D Pcryo_2510 RelB antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D Pcryo_1120 Prevent-host-death protein K18923 stbD; antitoxin StbD D Pcryo_1307 Addiction module toxin, Txe/YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Pcryo_1308 Prevent-host-death protein K19159 yefM; antitoxin YefM D Pcryo_2057 phage shock protein C, PspC K03973 pspC; phage shock protein C D Pcryo_2027 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Pcryo_0478 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Pcryo_2157 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Pcryo_2414 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Pcryo_2381 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pcryo_2018 protein of unknown function DUF339 K09159 cptB; antitoxin CptB D Pcryo_1656 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pcryo_1363 SMC protein-like protein K19171 dndD; DNA sulfur modification protein DndD C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:pcr04052] D Pcryo_2205 Nicotinate phosphoribosyltransferase related protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pcr04090] C 01504 Antimicrobial resistance genes [BR:pcr01504] D Pcryo_0703 signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Pcryo_0702 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Pcryo_1757 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Pcryo_1758 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Pcryo_1759 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pcr00537] D Pcryo_1814 peptidase M19, renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pcr03100] D Pcryo_R0054 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0058 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0063 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pcryo_R0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pcryo_R0005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pcryo_R0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pcryo_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pcryo_R0028 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pcryo_R0043 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pcryo_R0027 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pcryo_R0041 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pcryo_R0036 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Pcryo_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pcryo_R0007 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pcryo_R0045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pcryo_R0055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pcryo_R0031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pcryo_R0046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pcryo_R0015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pcryo_R0010 tRNA-His K14226 tRNA-His; tRNA His D Pcryo_R0020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pcryo_R0064 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pcryo_R0051 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pcryo_R0059 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pcryo_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pcryo_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pcryo_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pcryo_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pcryo_R0024 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pcryo_R0025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pcryo_R0032 tRNA-Met K14230 tRNA-Met; tRNA Met D Pcryo_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met D Pcryo_R0002 tRNA-Met K14230 tRNA-Met; tRNA Met D Pcryo_R0066 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Pcryo_R0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pcryo_R0018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pcryo_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pcryo_R0053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pcryo_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pcryo_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pcryo_R0013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pcryo_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Pcryo_R0014 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Pcryo_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val D Pcryo_R0040 tRNA-Val K14237 tRNA-Val; tRNA Val D Pcryo_R0042 tRNA-Val K14237 tRNA-Val; tRNA Val D Pcryo_R0019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0052 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pcryo_R0022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0049 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0057 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pcryo_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0056 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pcryo_R0034 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Pcryo_R0011 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Pcryo_R0038 ssrA; ssrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Pcryo_2108 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D Pcryo_0842 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D Pcryo_2430 short-chain dehydrogenase/reductase SDR K11166 DHRS7B; dehydrogenase/reductase SDR family member 7B [EC:1.1.-.-] D Pcryo_1085 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D Pcryo_0194 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D Pcryo_1012 Alcohol dehydrogenase, zinc-binding protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D Pcryo_2251 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D Pcryo_0204 NAD/FAD-dependent oxidoreductase-like protein K18208 RNLS; renalase [EC:1.6.3.5] D Pcryo_0087 Alcohol dehydrogenase GroES-like protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Pcryo_2074 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Pcryo_2236 cytochrome c, class I K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D Pcryo_2243 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Pcryo_1427 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Pcryo_1088 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Pcryo_0693 Protein-methionine-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Pcryo_1381 glutathione S-transferase-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D Pcryo_1254 glutathione S-transferase-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D Pcryo_1761 putative IMP dehydrogenase/GMP reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D Pcryo_2267 alpha/beta hydrolase fold protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D Pcryo_0775 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Pcryo_1893 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Pcryo_0667 1-Cys peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Pcryo_2078 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Pcryo_1819 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Pcryo_0420 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Pcryo_1544 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Pcryo_0714 globin K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D Pcryo_0586 oxidoreductase FAD/NAD(P)-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Pcryo_1535 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Pcryo_1465 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D Pcryo_0730 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Pcryo_1412 3-oxoacyl-(acyl-carrier protein) synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D Pcryo_2276 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Pcryo_1343 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Pcryo_0397 lyso-ornithine lipid acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D Pcryo_0428 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Pcryo_1943 transglutaminase-like protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Pcryo_1342 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Pcryo_2313 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Pcryo_2431 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Pcryo_1035 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Pcryo_0690 Polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D Pcryo_1175 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Pcryo_0998 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Pcryo_1238 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Pcryo_0101 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Pcryo_1191 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Pcryo_1973 PHP-like protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Pcryo_1097 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Pcryo_1953 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Pcryo_1532 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Pcryo_0212 negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pcryo_0038 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Pcryo_2448 peptidase S45, penicillin amidase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D Pcryo_0222 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Pcryo_1786 amidohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D Pcryo_0250 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Pcryo_1816 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Pcryo_1861 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D Pcryo_1945 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Pcryo_0979 D-3-hydroxyaspartate aldolase K18425 dhaa; 3-hydroxy-D-aspartate aldolase [EC:4.1.3.41] D Pcryo_0520 protein of unknown function UPF0031 K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Pcryo_1733 hypothetical protein K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D Pcryo_0040 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Pcryo_0852 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Pcryo_2424 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D Pcryo_2425 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D Pcryo_2426 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D Pcryo_2427 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D Pcryo_2428 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D Pcryo_2429 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D Pcryo_1645 Heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Pcryo_1347 Heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Pcryo_1603 formate dehydrogenase, subunit FdhD K02379 fdhD; FdhD protein D Pcryo_1661 Ferredoxin, 2Fe-2S type K04755 fdx; ferredoxin, 2Fe-2S D Pcryo_0272 4Fe-4S ferredoxin, iron-sulfur binding protein K05524 fdxA; ferredoxin D Pcryo_1287 4Fe-4S ferredoxin, iron-sulfur binding protein K05524 fdxA; ferredoxin D Pcryo_1116 ferredoxin K11107 yfaE; ferredoxin D Pcryo_1657 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D Pcryo_0527 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Pcryo_2258 protein of unknown function DUF1458 K09165 K09165; dodecin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Pcryo_0294 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Pcryo_1671 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A C 99987 Cofactor metabolism D Pcryo_0686 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism C 99999 Others D Pcryo_1273 DoxX K15977 K15977; putative oxidoreductase D Pcryo_1542 DoxX K15977 K15977; putative oxidoreductase D Pcryo_1633 Carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Pcryo_0526 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Pcryo_1475 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Pcryo_2133 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Pcryo_2346 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D Pcryo_0136 RNA binding S1 K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D Pcryo_1678 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Pcryo_2233 trigger factor K03545 tig; trigger factor D Pcryo_0985 UreE urease accessory-like protein K03187 ureE; urease accessory protein D Pcryo_0883 UreE urease accessory-like protein K03187 ureE; urease accessory protein D Pcryo_0984 Urease accessory protein UreF K03188 ureF; urease accessory protein D Pcryo_0884 Urease accessory protein UreF K03188 ureF; urease accessory protein D Pcryo_0983 urease accessory protein UreG K03189 ureG; urease accessory protein D Pcryo_0885 urease accessory protein UreG K03189 ureG; urease accessory protein D Pcryo_0989 Urease accessory protein UreD K03190 ureD; urease accessory protein D Pcryo_0879 Urease accessory protein UreD K03190 ureD; urease accessory protein D Pcryo_0886 HupE/UreJ protein K03192 ureJ; urease accessory protein D Pcryo_0358 SsrA-binding protein K03664 smpB; SsrA-binding protein D Pcryo_2447 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D Pcryo_0550 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D Pcryo_2309 OsmC-like protein K07397 yhfA; putative redox protein D Pcryo_2202 HesB/YadR/YfhF K07400 nfuA; Fe/S biogenesis protein NfuA D Pcryo_1142 molybdenum cofactor sulfurylase K07402 xdhC; xanthine dehydrogenase accessory factor D Pcryo_1806 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Pcryo_2119 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Pcryo_2198 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Pcryo_2463 DNA processing protein DprA, putative K04096 smf; DNA processing protein D Pcryo_0103 Recombination protein MgsA K07478 ycaJ; putative ATPase D Pcryo_1626 protein of unknown function DUF927 K06919 K06919; putative DNA primase/helicase D Pcryo_0379 conserved hypothetical protein K07501 K07501; 3'-5' exonuclease D Pcryo_0630 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_0391 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_2076 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_2411 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_2438 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_0718 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_0747 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_0847 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_1578 transposase IS3/IS911 K07483 K07483; transposase D Pcryo_0925 putative transposase OrfA, IS3/IS911family K07483 K07483; transposase D Pcryo_1962 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Pcryo_1364 transposase, mutator type K07493 K07493; putative transposase D Pcryo_0929 transposase, mutator family K07493 K07493; putative transposase D Pcryo_0930 transposase, mutator type K07493 K07493; putative transposase D Pcryo_0957 transposase, mutator type K07493 K07493; putative transposase D Pcryo_0958 transposase, mutator family K07493 K07493; putative transposase D Pcryo_0649 putative transposase, IS891/IS1136/IS1341 K07496 K07496; putative transposase D Pcryo_0392 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_0631 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_2077 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_2412 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_2437 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_0715 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_0717 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_0748 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_0848 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_1577 Integrase, catalytic region K07497 K07497; putative transposase D Pcryo_0926 putative transposase IS30 family K07497 K07497; putative transposase D Pcryo_0927 putative transposase IS30 family K07497 K07497; putative transposase D Pcryo_0961 phage integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D Pcryo_0799 conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Pcryo_2139 formate/nitrite transporter family (FNT) K21990 yfdC; formate-nitrite transporter family protein D Pcryo_2274 Amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Pcryo_0691 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Pcryo_1576 Sodium/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Pcryo_1704 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Pcryo_0452 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Pcryo_2252 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Pcryo_1215 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Pcryo_2140 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D Pcryo_2072 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D Pcryo_1918 permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D Pcryo_0405 permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D Pcryo_1974 intracellular septation protein A K06190 ispZ; intracellular septation protein C 99993 Cell motility C 99995 Signaling proteins D Pcryo_0763 stress protein K05792 terA; tellurite resistance protein TerA D Pcryo_0771 stress protein K05795 terD; tellurium resistance protein TerD D Pcryo_0769 stress protein K05795 terD; tellurium resistance protein TerD D Pcryo_0767 stress protein K05791 terZ; tellurium resistance protein TerZ D Pcryo_1054 conserved hypothetical protein K05791 terZ; tellurium resistance protein TerZ D Pcryo_2130 UspA K06149 uspA; universal stress protein A D Pcryo_1295 carbon starvation protein CstA K06200 cstA; carbon starvation protein D Pcryo_0373 GTP-binding protein TypA K06207 typA; GTP-binding protein D Pcryo_0591 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Pcryo_0438 putative signal-transduction protein with CBS domains K07182 K07182; CBS domain-containing protein D Pcryo_1970 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K22747 AIFM3; apoptosis-inducing factor 3 C 99992 Structural proteins D Pcryo_1753 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D Pcryo_0187 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D Pcryo_0661 peptidase M23B K06194 nlpD; lipoprotein NlpD D Pcryo_1052 OmpW K07275 ompW; outer membrane protein D Pcryo_2401 conserved hypothetical protein; putative outer membrane protein K07275 ompW; outer membrane protein D Pcryo_1039 secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein D Pcryo_2294 conserved hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D Pcryo_2109 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Pcryo_1741 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Pcryo_1350 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Pcryo_1351 putative cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Pcryo_1740 putative cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D Pcryo_2223 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Pcryo_1385 BFD-like (2Fe-2S)-binding region K02192 bfd; bacterioferritin-associated ferredoxin D Pcryo_1080 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC D Pcryo_2086 imelysin, Metallo peptidase, MEROPS family M75 K07231 K07231; putative iron-regulated protein D Pcryo_0696 putative copper-resistance protein CopB K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D Pcryo_0965 conserved hypothetical protein K02442 glpM; membrane protein GlpM D Pcryo_1102 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Pcryo_1303 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein D Pcryo_1614 hypothetical protein K06198 coiA; competence protein CoiA D Pcryo_2403 Patatin K07001 K07001; NTE family protein D Pcryo_0044 HesB/YadR/YfhF K15724 erpA; iron-sulfur cluster insertion protein D Pcryo_0536 tRNA-processing RNAse BN K07058 K07058; membrane protein D Pcryo_0672 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA D Pcryo_0411 Rhodanese-like protein K07146 K07146; UPF0176 protein D Pcryo_1418 protein of unknown function DUF336 K11477 glcG; glc operon protein GlcG D Pcryo_1464 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH D Pcryo_1437 LemA K03744 lemA; LemA protein D Pcryo_0453 LemA K03744 lemA; LemA protein D Pcryo_1581 putative SlyX protein K03745 slyX; SlyX protein D Pcryo_2147 protein of unknown function DUF368 K08974 K08974; putative membrane protein D Pcryo_2387 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein D Pcryo_0641 phosphate-starvation-inducible E K13256 psiE; protein PsiE D Pcryo_0170 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D Pcryo_0454 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Pcryo_0025 hypothetical protein K06921 K06921; uncharacterized protein D Pcryo_1719 protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Pcryo_2416 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein D Pcryo_0728 FAD dependent oxidoreductase K06954 K06954; uncharacterized protein D Pcryo_0141 conserved hypothetical protein K06975 K06975; uncharacterized protein D Pcryo_2415 protein of unknown function UPF0227 K07000 K07000; uncharacterized protein D Pcryo_1093 conserved hypothetical protein K07018 K07018; uncharacterized protein D Pcryo_0029 conserved hypothetical protein K07019 K07019; uncharacterized protein D Pcryo_2237 putative toxin regulator PfoR K07035 K07035; uncharacterized protein D Pcryo_2143 YgfB and YecA K07039 K07039; uncharacterized protein D Pcryo_2295 protein of unknown function, zinc metallopeptidase putative K07054 K07054; uncharacterized protein D Pcryo_0083 conserved hypothetical protein K07070 K07070; uncharacterized protein D Pcryo_2461 conserved hypothetical protein K07071 K07071; uncharacterized protein D Pcryo_1545 conserved hypothetical protein K07078 K07078; uncharacterized protein D Pcryo_0741 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Pcryo_2122 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Pcryo_0347 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Pcryo_2117 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Pcryo_0904 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Pcryo_0331 Twin-arginine translocation pathway signal K07093 K07093; uncharacterized protein D Pcryo_2459 metallophosphoesterase K07098 K07098; uncharacterized protein D Pcryo_2460 metallophosphoesterase K07098 K07098; uncharacterized protein D Pcryo_0192 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein D Pcryo_0191 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein D Pcryo_1612 Sel1 K07126 K07126; uncharacterized protein D Pcryo_2230 Sel1 K07126 K07126; uncharacterized protein D Pcryo_0412 Sel1 K07126 K07126; uncharacterized protein D Pcryo_1457 Sel1 K07126 K07126; uncharacterized protein D Pcryo_1286 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Pcryo_2474 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Pcryo_0230 GatB/Yqey K09117 K09117; uncharacterized protein D Pcryo_1123 protein of unknown function DUF493 K09158 K09158; uncharacterized protein D Pcryo_2280 conserved hypothetical protein K09160 K09160; uncharacterized protein D Pcryo_0729 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein D Pcryo_1963 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D Pcryo_0301 protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Pcryo_1975 YCII-related protein K09780 K09780; uncharacterized protein D Pcryo_0281 protein of unknown function DUF808 K09781 K09781; uncharacterized protein D Pcryo_2514 protein of unknown function DUF808 K09781 K09781; uncharacterized protein D Pcryo_2134 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Pcryo_1473 conserved hypothetical protein K09792 K09792; uncharacterized protein D Pcryo_2075 protein of unknown function DUF465 K09794 K09794; uncharacterized protein D Pcryo_2516 protein of unknown function DUF475 K09799 K09799; uncharacterized protein D Pcryo_0770 protein of unknown function DUF475 K09799 K09799; uncharacterized protein D Pcryo_1787 protein of unknown function DUF475 K09799 K09799; uncharacterized protein D Pcryo_0289 protein of unknown function UPF0125 K09801 K09801; uncharacterized protein D Pcryo_2490 putative inner membrane protein K09803 K09803; uncharacterized protein D Pcryo_2432 conserved hypothetical protein K05952 K05952; uncharacterized protein D Pcryo_0542 protein of unknown function DUF328 K09861 K09861; uncharacterized protein D Pcryo_1404 protein of unknown function DUF329 K09862 K09862; uncharacterized protein D Pcryo_2051 conserved hypothetical protein K09895 K09895; uncharacterized protein D Pcryo_0807 conserved hypothetical protein K09902 K09902; uncharacterized protein D Pcryo_1853 conserved hypothetical protein K09909 K09909; uncharacterized protein D Pcryo_0967 conserved hypothetical protein K09912 K09912; uncharacterized protein D Pcryo_1642 conserved hypothetical protein K09916 K09916; uncharacterized protein D Pcryo_0316 protein of unknown function DUF482 K09919 K09919; uncharacterized protein D Pcryo_0779 conserved hypothetical protein K09926 K09926; uncharacterized protein D Pcryo_0790 conserved hypothetical protein K09928 K09928; uncharacterized protein D Pcryo_2083 conserved hypothetical protein K09947 K09947; uncharacterized protein D Pcryo_0910 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein D Pcryo_1845 conserved hypothetical protein K09959 K09959; uncharacterized protein D Pcryo_0643 conserved hypothetical protein K09966 K09966; uncharacterized protein D Pcryo_0473 conserved hypothetical protein K09977 K09977; uncharacterized protein D Pcryo_2250 protein of unknown function DUF1285 K09986 K09986; uncharacterized protein D Pcryo_0810 conserved hypothetical protein K09989 K09989; uncharacterized protein D Pcryo_1769 protein of unknown function DUF156 K07807 K07807; uncharacterized protein D Pcryo_2084 conserved hypothetical protein K07338 K07338; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 27, 2024