+D GENES KO
#
KEGG Orthology (KO) - Pseudoalteromonas translucida TAC125
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pha00010]
D PSHAa1364 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PSHAa1139 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSHAa0463 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAa1742 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAb0549 putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAb0548 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PSHAa0596 fbaA; putative fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa1743 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa1093 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa0873 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PSHAa1900 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSHAa1368 epd; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSHAa0595 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PSHAa0366 gpmM; phosphoglycerate mutase III, cofactor-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PSHAa0742 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSHAa1406 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PSHAb0557 ppsA; Phosphoenolpyruvate synthase (Pyruvate, water dikinase) (PEP synthase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PSHAa0391 aceE; pyruvate dehydrogenase, decarboxylase subunit, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PSHAa0392 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa2213 adhC; alcohol dehydrogenase class III (Glutathione-dependent formaldehyde dehydrogenase)(FDH) (FALDH) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1386 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAb0511 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PSHAa2208 mtD; Mannitol dehydrogenase (NAD-dependent mannitol dehydrogenase) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PSHAb0219 aldB; aldehyde dehydrogenase B (wide specificity) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PSHAa0698 acs; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PSHAa1767 galM; galactose-1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PSHAa1634 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSHAa2966 conserved protein of unknown function K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PSHAa0228 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PSHAa1333 putative PTS system protein (partial match) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:pha00020]
D PSHAa1653 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PSHAa0159 acnA; aconitate hydratase (likely to be used in stationary phase); likely to have a 4Fe-4S cluster K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PSHAa0184 acnB; bifunctional protein [Includes: aconitate hydratase 2; 2-methylisocitrate dehydratase] (iron-sulfur protein) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PSHAa1727 Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PSHAa1303 icd; isocitrate dehydrogenase, specific for NADP+ K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PSHAb0465 probable isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D PSHAa1647 sucA; 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PSHAa1646 sucB; dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa1644 sucD; succinyl-CoA synthetase, alpha subunit, NAD(P)-binding K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PSHAa1645 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PSHAa2002 ygfH; propionyl-CoA:succinate-CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PSHAa1649 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PSHAa1648 sdhB; succinate dehydrogenase, Fe-S protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PSHAa1651 sdhC; putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PSHAa1650 sdhD; putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhC K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PSHAa1166 fumB; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PSHAa0048 fumC; fumarase C (fumarate hydratase Class II) K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PSHAa2658 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PSHAa0228 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PSHAa0391 aceE; pyruvate dehydrogenase, decarboxylase subunit, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PSHAa0392 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pha00030]
D PSHAa1139 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSHAa1140 zwf; Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1. 49) (G6PD) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PSHAa1141 agaI; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PSHAa1407 putative gluconate-6-phosphate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PSHAa2710 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PSHAa0671 tktA; transketolase 1 (TK 1) K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PSHAa2559 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PSHAa0667 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PSHAa0214 putative sugar-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PSHAb0081 deoB; Phosphopentomutase (Phosphodeoxyribomutase) K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PSHAa1634 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSHAa1054 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PSHAa1366 edd; 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D PSHAa1744 putative 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PSHAa1367 eda; multifunctional: 2-keto-3-deoxygluconate 6-phosphate aldolase; 2-keto-4-hydroxyglutarate aldolase; oxaloacetate decarboxylase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PSHAb0480 idnK; putative D-gluconate kinase active at low temperature (idonate catabolism) K00851 idnK; gluconokinase [EC:2.7.1.12]
D PSHAa1745 putative ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PSHAb0548 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PSHAa0596 fbaA; putative fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa1743 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa1093 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa0463 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAa1742 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAb0549 putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:pha00040]
D PSHAa1747 putative pectin degradation protein (Sugar phosphate isomerase family) K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D PSHAa0444 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PSHAa0750 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSHAa2710 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:pha00051]
D PSHAb0209 putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PSHAa2920 cpsB; putative mannose-1-phosphate guanyltransferase, colanic acid synthesis K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PSHAa0463 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAa1742 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAb0549 putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAb0208 uxuB; D-mannonate oxidoreductase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67]
D PSHAa1749 putative alginate lyase precursor (partial match) K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D PSHAb0548 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PSHAa0596 fbaA; putative fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa1743 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa1093 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa0873 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pha00052]
D PSHAa1767 galM; galactose-1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PSHAa1769 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PSHAa1770 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PSHAa0469 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PSHAa0750 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSHAa1634 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSHAa1364 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PSHAa0287 putative mandelate racemase/muconate lactonizing enzyme family K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D PSHAa2848 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PSHAa1351 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D PSHAa0444 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:pha00500]
D PSHAa2848 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PSHAa1351 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PSHAa0750 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSHAa2162 bcsA; Cellulose synthase catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D PSHAa1357 putative alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PSHAa1333 putative PTS system protein (partial match) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PSHAa1634 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSHAa1364 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PSHAa1139 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSHAb0209 putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pha00520]
D PSHAb0065 nagZ; Beta-hexosaminidase A precursor (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) (Chitobiase) K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PSHAa1333 putative PTS system protein (partial match) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PSHAb0157 nagA; putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PSHAb0148 nagB; putative glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PSHAb0209 putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PSHAa2994 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PSHAa0872 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PSHAa3006 glmU; bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PSHAb0124 putative molecular chaperone K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PSHAa1419 putative phosphoglycolate phosphatase, contains a phosphatase-like domain K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D PSHAa2631 conserved protein of unknown function K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PSHAa2630 Mannose-1-phosphate guanyltransferase-related protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D PSHAa2538 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PSHAa2914 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PSHAb0149 nagK; putative N-acetylglucosamine kinase with Actin-like ATPase domain/transcriptional regulator (NagC/XylR (ROK) family) K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D PSHAb0150 nanE; putative N-acetylmannosamine-6P epimerase, NAD(P)-linked, with ribulose-phoshate binding barrel K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PSHAb0156 nanA; N-acetylneuraminate lyase (aldolase) K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D PSHAa0466 rffE; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PSHAa1364 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PSHAa1634 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSHAa0750 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSHAa0444 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PSHAa1769 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PSHAa1770 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PSHAa0469 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PSHAa1139 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSHAa2920 cpsB; putative mannose-1-phosphate guanyltransferase, colanic acid synthesis K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:pha00620]
D PSHAa0698 acs; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PSHAa0391 aceE; pyruvate dehydrogenase, decarboxylase subunit, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PSHAa0392 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa2142 mhpF; Acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D PSHAb0511 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PSHAa2213 adhC; alcohol dehydrogenase class III (Glutathione-dependent formaldehyde dehydrogenase)(FDH) (FALDH) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1386 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa2208 mtD; Mannitol dehydrogenase (NAD-dependent mannitol dehydrogenase) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PSHAa1406 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PSHAa2014 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PSHAa0265 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PSHAa0266 accC; biotin carboxylase (A subunit of acetyl-CoA carboxylase)(ACC) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PSHAa2074 accD; acetylCoA carboxylase, carboxyltranferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PSHAb0219 aldB; aldehyde dehydrogenase B (wide specificity) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PSHAa2002 ygfH; propionyl-CoA:succinate-CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PSHAa1091 gloA; glyoxalase I, nickel isomerase (Lactoylglutathione lyase) K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PSHAa1601 gloA; Lactoylglutathione lyase (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PSHAa1966 gloB; putative hydroxyacylglutathione hydrolase with metallo-hydrolase/oxidoreductase domain K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PSHAa1401 putative enzyme with metallo-hydrolase/oxidoreductase domain K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PSHAa2153 putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PSHAa1565 sfcA; NAD-linked malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PSHAa2725 maeB; putative NADP-dependent malic enzyme (NADP-dependent malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PSHAa0539 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D PSHAa0540 oadB; Oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PSHAa0538 oadG; putative oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D PSHAa2658 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PSHAa1166 fumB; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PSHAa0048 fumC; fumarase C (fumarate hydratase Class II) K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PSHAb0314 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PSHAa0228 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PSHAb0557 ppsA; Phosphoenolpyruvate synthase (Pyruvate, water dikinase) (PEP synthase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PSHAb0061 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2894 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pha00630]
D PSHAb0062 aceA; Isocitrate lyase 2 K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D PSHAa0698 acs; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PSHAb0061 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PSHAa2658 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PSHAa1653 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PSHAa0159 acnA; aconitate hydratase (likely to be used in stationary phase); likely to have a 4Fe-4S cluster K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PSHAa0184 acnB; bifunctional protein [Includes: aconitate hydratase 2; 2-methylisocitrate dehydratase] (iron-sulfur protein) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1737 putative catalase K03781 katE; catalase [EC:1.11.1.6]
D PSHAb0205 katB; catalase K03781 katE; catalase [EC:1.11.1.6]
D PSHAa2153 putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PSHAa2619 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PSHAa2709 gph; phosphoglycolate phosphatase, contains a phosphatase-like domain K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PSHAa1814 putative phosphoglycolate phosphatase, contains a phosphatase-like domain K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PSHAa0166 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSHAa2376 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PSHAa2473 gcvP; glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PSHAa2475 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa2474 gcvH; glycine cleavage system H protein, carrier of aminomethyl moiety via covalently bound lipoyl cofactor K02437 gcvH; glycine cleavage system H protein
D PSHAb0379 putative protein with predicted kinase domain K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D PSHAa1744 putative 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PSHAa1367 eda; multifunctional: 2-keto-3-deoxygluconate 6-phosphate aldolase; 2-keto-4-hydroxyglutarate aldolase; oxaloacetate decarboxylase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PSHAa0701 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pha00640]
D PSHAa0698 acs; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PSHAa2444 prpE; Propionyl CoA synthase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PSHAa1632 BckdhA; 2-oxoisovalerate dehydrogenase alpha subunit (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (BCKDE1A) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PSHAa1631 bkdA2; 2-oxoisovalerate dehydrogenase beta subunit (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PSHAa1630 dbT; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (Dihydrolipoyllysine-residue(2-methylpropanoyl)transferase E2) (Dihydrolipoamide branched chain transacylase) (BCKAD E2 subunit) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa1488 yhdH; putative dehydrogenase, NAD(P)-binding domain and GroES-like domain K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa2014 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PSHAa0265 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PSHAa0266 accC; biotin carboxylase (A subunit of acetyl-CoA carboxylase)(ACC) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PSHAa2074 accD; acetylCoA carboxylase, carboxyltranferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PSHAa1645 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PSHAa1644 sucD; succinyl-CoA synthetase, alpha subunit, NAD(P)-binding K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PSHAa1455 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PSHAa1774 prpC; methylcitrate synthase (citrate synthase 2) K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PSHAa1765 prpD; 2-methyl citrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D PSHAa1773 acnA; aconitate hydratase 1 K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D PSHAa1772 conserved protein of unknown function K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D PSHAa0184 acnB; bifunctional protein [Includes: aconitate hydratase 2; 2-methylisocitrate dehydratase] (iron-sulfur protein) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PSHAa1775 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D PSHAa2175 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D PSHAa0574 putative alcohol dehydrogenase with dehydroquinate synthase-like domain K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:pha00650]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0399 bhbD; 3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa2242 putative short-chain alcohol dehydrogenase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PSHAa2142 mhpF; Acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D PSHAa0540 oadB; Oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PSHAa0902 putative acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D PSHAa1649 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PSHAa1648 sdhB; succinate dehydrogenase, Fe-S protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PSHAa1651 sdhC; putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PSHAa1650 sdhD; putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhC K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PSHAa2665 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa2402 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa1590 6-oxohexanoate dehydrogenase, succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa2002 ygfH; propionyl-CoA:succinate-CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PSHAa1448 hmgcL; Hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase) K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PSHAa1447 succinyl-CoA transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PSHAa2943 putative succinyl-CoA transferase, alpha subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PSHAa2942 putative succinyl-CoA transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PSHAa1446 atoA; succinyl-CoA transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PSHAa2944 bdhA; putative 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D PSHAa2771 ilvG; Acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PSHAb0464 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PSHAb0463 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PSHAa2770 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pha00660]
D PSHAa2771 ilvG; Acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PSHAb0464 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PSHAb0463 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PSHAa2770 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PSHAa1645 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PSHAa1644 sucD; succinyl-CoA synthetase, alpha subunit, NAD(P)-binding K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PSHAa2892 leuC; 3-isopropylmalate isomerase, subunit with LeuD K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PSHAa2891 leuD; 3-isopropylmalate isomerase, subunit with LeuC K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PSHAa2893 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pha00562]
D PSHAa0323 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PSHAa0438 putative phytase domain protein K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D PSHAb0257 putative oxidoreductase/dehydrogenase family K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D PSHAa1455 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PSHAa0873 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pha00190]
D PSHAb0118 ndh; Respiratory NADH dehydrogenase II K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PSHAa1649 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PSHAa1648 sdhB; succinate dehydrogenase, Fe-S protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PSHAa1651 sdhC; putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PSHAa1650 sdhD; putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhC K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PSHAa2530 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PSHAa2529 ubiquinol-cytochrome c reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PSHAa2528 Ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PSHAa2227 cyoE; protoheme IX farnesyltransferase (Heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
D PSHAa2865 Polyprenyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PSHAa2228 cyoD; cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PSHAa2869 Cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PSHAa2871 ctaD; Cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PSHAa2872 Cytochrome c oxidase, subunit II (partial) K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PSHAa2870 Cytochrome c oxidase assembly protein coxG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PSHAa2866 putative Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PSHAa1842 Cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PSHAa1843 putative Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PSHAa1844 putative Cbb3-type cytochrome oxidase, subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PSHAa1845 putative cytochrome c oxidase, subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PSHAa2229 cyoC; cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PSHAa2230 cyoB; Ubiquinol oxidase polypeptide I (Cytochrome o subunit 1) (Oxidase BO(3) subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Ubiquinol oxidase chain A) K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D PSHAa2231 cyoA; Ubiquinol oxidase polypeptide II (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 2) (Ubiquinol oxidase chain B) K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PSHAa2018 cydA; cytochrome d terminal oxidase, polypeptide subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PSHAa2019 cydB; cytochrome d terminal oxidase, polypeptide subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PSHAa2020 conserved protein of unknown function K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D PSHAa0285 putative cytochrome c4 family K08738 CYC; cytochrome c
D PSHAa3010 atpA; membrane-bound ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PSHAa3008 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PSHAa3009 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PSHAa3011 atpH; membrane-bound ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PSHAa3007 atpC; membrane-bound ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PSHAa3014 atpB; membrane-bound ATP synthase, F0 sector, subunit a, important for F0 assembly K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PSHAa3012 atpF; membrane-bound ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PSHAa3013 atpE; membrane-bound ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PSHAa0445 ppa; inorganic pyrophosphatase, manganese-dependent K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pha00680]
D PSHAa2213 adhC; alcohol dehydrogenase class III (Glutathione-dependent formaldehyde dehydrogenase)(FDH) (FALDH) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1386 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1385 putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PSHAa2376 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PSHAa2619 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PSHAa0742 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSHAb0314 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PSHAa2658 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PSHAb0548 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PSHAa0596 fbaA; putative fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa1743 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa1093 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSHAa0463 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAa1742 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAb0549 putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAa1699 putative oxidoreductase protein K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148]
D PSHAa0698 acs; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PSHAb0557 ppsA; Phosphoenolpyruvate synthase (Pyruvate, water dikinase) (PEP synthase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PSHAa0366 gpmM; phosphoglycerate mutase III, cofactor-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PSHAa0666 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PSHAa1422 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PSHAa0661 serB; putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pha00910]
D PSHAa1477 probable nitrite reductase (EC 1.7.99.3) K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D PSHAa2417 nor; Nitric oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D PSHAa1670 putative glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PSHAa1392 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PSHAa0166 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSHAb0127 gltB; glutamate synthase, large subunit, GOGAT K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PSHAb0128 gltD; glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein, GOGAT K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PSHAa2765 beta-carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pha00920]
D PSHAa0211 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PSHAa0212 cysD; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PSHAa0209 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PSHAa0208 cysQ; likely to be PAP (3',5' adenosine diphosphate) 3' phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PSHAa0128 carbohydrate phosphatase; putative CysQ protein duplicate K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PSHAa0156 cysH; 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PSHAa0154 cysJ; sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D PSHAa0155 cysI; sulfite reductase, beta subunit, NADPH-dependent hemoprotein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PSHAa0459 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PSHAa2314 glpE; thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D PSHAa0645 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PSHAa1918 cysK; O-acetylserine sulfhydrylase, PLP-dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PSHAa2224 metA; Homoserine O-succinyltransferase (Homoserine O-transsuccinylase) (HTS) K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PSHAa2945 metX; putative homoserine O-acetyltransferase (EC 2.3. 1.31) K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PSHAa2723 metB; cystathionine gamma-synthase, PLP-dependent K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pha00061]
D PSHAa2014 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PSHAa0265 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PSHAa0266 accC; biotin carboxylase (A subunit of acetyl-CoA carboxylase)(ACC) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PSHAa2074 accD; acetylCoA carboxylase, carboxyltranferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PSHAb0394 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PSHAa1807 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PSHAb0393 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PSHAa1809 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PSHAb0304 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III protein 2 (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III 2) (KAS III 2) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PSHAa1382 putative beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D PSHAa2080 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PSHAb0407 putative 3-oxoacyl-(Acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PSHAa1806 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PSHAb0410 putative 3-oxoacyl-[acyl-carrier-protein] synthase II (fabF-like) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PSHAa2151 putative reductase or dehydrogenase protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAb0409 putative 3-oxoacyl-[acyl-carrier-protein] reductase (fabG-like) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa0894 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1808 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1460 putative 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1491 fabA; beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isomerase) K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PSHAa2025 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PSHAa2242 putative short-chain alcohol dehydrogenase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PSHAb0502 fadD; acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pha00071]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0966 fadI; beta-keto thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa0010 fadA; 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 2.3.1.16 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa1952 fadE; Acyl-coenzyme A dehydrogenase (ACDH) K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PSHAb0374 fadE; Acyl-coenzyme A dehydrogenase (ACDH) K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PSHAa1920 fadE; acyl coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PSHAb0502 fadD; acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSHAa2213 adhC; alcohol dehydrogenase class III (Glutathione-dependent formaldehyde dehydrogenase)(FDH) (FALDH) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1386 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAb0511 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:pha00121]
D PSHAa2129 hdhA; 7-alpha-hydroxysteroid dehydrogenase (7-alpha-HSDH) K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pha00561]
D PSHAb0379 putative protein with predicted kinase domain K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D PSHAa2208 mtD; Mannitol dehydrogenase (NAD-dependent mannitol dehydrogenase) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PSHAb0551 glpK; putative glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PSHAa0190 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PSHAa0142 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PSHAa1810 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PSHAa2303 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PSHAa2584 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PSHAa2773 dgkA; putative diacylglycerol kinase (DAGK) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PSHAa2786 dgkA; Diacylglycerol kinase (DAGK) (Diglyceride kinase) (DGK) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:pha00564]
D PSHAa0370 gpsA; glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PSHAa0189 glpD; sn-glycerol-3-phosphate dehydrogenase FAD binding; dioxygen as acceptor K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PSHAb0547 glpD; putative oxygen-dependent membrane associated glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PSHAa0142 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PSHAa2303 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PSHAa2584 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PSHAa2773 dgkA; putative diacylglycerol kinase (DAGK) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PSHAa2786 dgkA; Diacylglycerol kinase (DAGK) (Diglyceride kinase) (DGK) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PSHAa0175 pldA; putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D PSHAa0373 putative lysophospholipase L(2) K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PSHAa2483 putative glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PSHAa2187 conserved protein of unknown function K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PSHAa2031 cdsA; phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PSHAa1719 Phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PSHAa0486 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PSHAa1914 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PSHAa2368 putative phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D PSHAa1313 putative protein with phospholipase D/nuclease domain K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:pha00565]
D PSHAa0175 pldA; putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:pha00600]
D PSHAb0159 putative sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism [PATH:pha00590]
D PSHAa0175 pldA; putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D PSHAa2915 putative cold-active aminopeptidase; secreted using a signal peptide K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
C 00591 Linoleic acid metabolism
D PSHAa0175 pldA; putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:pha00592]
D PSHAa0175 pldA; putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D PSHAa0966 fadI; beta-keto thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa0010 fadA; 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 2.3.1.16 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pha01040]
D PSHAa2897 putative long chain acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PSHAa1269 putative fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D PSHAa1268 putative Oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D PSHAa1880 apeA; multifunctional: Acyl-CoA thioesterase I precursor (Protease I) (Lysophospholipase L1) (Lecithinase B) K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PSHAa0141 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pha00230]
D PSHAa2591 nudF; ADP-ribose pyrophosphatase (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (ASPPase) K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PSHAa0127 nudE; ADP compounds hydrolase nudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D PSHAb0081 deoB; Phosphopentomutase (Phosphodeoxyribomutase) K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PSHAa1634 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSHAa1054 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PSHAa2070 purF; amidophosphoribosyltransferase (PRPP amidotransferase) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PSHAa0343 purD; phosphoribosylglycinamide synthetase (GAR synthetase) K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PSHAa1948 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PSHAa2330 purL; Phophoribosylformylglycinamidine synthase (FGAM synthetase) K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PSHAa1947 purM; phosphoribosylaminoimidazole synthetase (AIR synthetase) K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PSHAa1572 purK; phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PSHAa1573 purE; phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PSHAa0454 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PSHAa1692 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PSHAa0345 purH; bifunctional purine biosynthesis protein purH[Includes:IMP cyclohydrolase (Inosinicase) (IMP synthetase) (ATIC);Phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) ] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PSHAa1200 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PSHAb0345 ushA; Protein ushA precursor [Includes: UDP-sugar hydrolase (UDP-sugar diphosphatase) (UDP-sugar pyrophosphatase); 5'-nucleotidase (5'-NT)] K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PSHAa2167 putative esterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PSHAa0687 surE; acid phosphatase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PSHAa0126 putative hydrolase, contains a phosphatase-like domain K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D PSHAa2334 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D PSHAb0082 deoD; Purine nucleoside phosphorylase (Inosine phosphorylase) (PNP) K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PSHAa0672 conserved protein of unknown function K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PSHAa0934 conserved protein of unknown function K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PSHAa0648 guaB; IMP dehydrogeanse K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PSHAb0142 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PSHAa2496 conserved protein of unknown function K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D PSHAa2608 rdgB; putative inosine/xanthosine triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PSHAa0649 guaA; GMP synthetase (glutamine aminotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PSHAa2790 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PSHAa1418 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PSHAa1417 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PSHAb0109 dgt; Deoxyguanosinetriphosphate triphosphohydrolase (dGTPase) (dGTP triphosphohydrolase) K01129 dgt; dGTPase [EC:3.1.5.1]
D PSHAa1274 dgt; putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PSHAa2793 spoT; bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PSHAa0115 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (Guanosine pentaphosphate phosphohydrolase) (pppGpp-5'-phosphohydrolase) K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PSHAa0739 relA; (p)ppGpp synthetase I (GTP pyrophosphokinase) K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D PSHAa0275 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PSHAa1943 putative Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PSHAa0102 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D PSHAb0469 conserved protein of unknown function K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PSHAa1208 adk; adenylate kinase(ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PSHAa0740 mazG; Nucleoside triphosphate pyrophosphohydrolase, non-specific K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PSHAa2589 cpdA; cyclic 3',5'-adenosine monophosphate phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PSHAa0439 conserved protein of unknown function; putative hydrolase activity(metallophosphoesterase) K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PSHAa2637 apaH; diadenosine tetraphosphatase (Ap4A hydrolase) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D PSHAa0209 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PSHAa0211 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PSHAa0212 cysD; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PSHAa1759 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PSHAa1758 ureB; urease beta subunit (Urea amidohydrolase) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PSHAa1757 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:pha00240]
D PSHAa1229 carB; carbamoyl phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PSHAa1228 carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PSHAa2254 pyrB; aspartate transcarbamoylase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PSHAa1183 pyrC; dihydro-orotase, DHOase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PSHAa1669 pyrD; dihydro-orotate oxidase, FMN-linked K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PSHAa2787 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PSHAa1429 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PSHAa2034 pyrH; uridylate kinase; belongs to the aspartate/carbamate kinase family; hexamer K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PSHAb0142 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PSHAa0740 mazG; Nucleoside triphosphate pyrophosphohydrolase, non-specific K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PSHAa2679 conserved protein of unknown function with Maf/Ham1 domain K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PSHAa1940 conserved protein of unknown function K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D PSHAa0741 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PSHAa1424 cmk; cytidine monophosphate (CMP) kinase; belong to the ubiquitous class of nucleotide kinases K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PSHAb0080 udk; Uridine kinase (Uridine monophosphokinase) (Cytidine monophosphokinase) K00876 udk; uridine kinase [EC:2.7.1.48]
D PSHAb0345 ushA; Protein ushA precursor [Includes: UDP-sugar hydrolase (UDP-sugar diphosphatase) (UDP-sugar pyrophosphatase); 5'-nucleotidase (5'-NT)] K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PSHAa2167 putative esterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PSHAa0687 surE; acid phosphatase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PSHAa2497 putative enzyme with a phosphatase-like domain, HAD-superfamily hydrolase domain K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D PSHAb0316 udp; putative uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PSHAa0672 conserved protein of unknown function K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PSHAb0377 upp; Uracil phosphoribosyltransferase (UMP pyrophosphorylase) (UPRTase) K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PSHAb0469 conserved protein of unknown function K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PSHAb0315 cdd; putative cytidine/deoxycytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PSHAa1319 dcd; 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PSHAa1418 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PSHAa1417 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PSHAa1803 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PSHAb0294 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PSHAa0749 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pha00250]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PSHAa0725 nadB; quinolinate synthetase, B protein (L-aspartate oxidase) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PSHAa1408 ansA; L-asparaginase I(L-asparagine amidohydrolase I) (L-ASNase I) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PSHAa1143 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PSHAa2796 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PSHAa1440 asnB; asparagine synthetase B[glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PSHAa2921 putative C-N hydrolase; superfamily UPF0012 K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PSHAa1323 yfbQ; putative PLP-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PSHAa1718 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PSHAa2288 argG; Argininosuccinate synthase (Citrulline--aspartate ligase) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PSHAa2287 argHA; Bifunctional protein argHA [Argininosuccinate lyase (Arginosuccinase) (ASAL) and Amino-acid acetyltransferase (N-acetylglutamate synthase)(AGS)(NAGS)] K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D PSHAa0275 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PSHAa1943 putative Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PSHAa1692 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PSHAa2254 pyrB; aspartate transcarbamoylase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PSHAa2665 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa2402 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa1590 6-oxohexanoate dehydrogenase, succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAb0127 gltB; glutamate synthase, large subunit, GOGAT K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PSHAb0128 gltD; glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein, GOGAT K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PSHAa1670 putative glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PSHAa1392 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PSHAa2264 putA; bifunctional putA protein: Proline dehydrogenase (Proline oxidase) and Delta-1-pyrroline-5-carboxylate dehydrogenase(P5C dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PSHAa0166 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSHAa1229 carB; carbamoyl phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PSHAa1228 carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PSHAa2335 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PSHAa2994 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PSHAa2070 purF; amidophosphoribosyltransferase (PRPP amidotransferase) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pha00260]
D PSHAa0533 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PSHAa1250 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PSHAa2379 thrA; Bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PSHAa2722 metL; bifunctional: aspartokinase II (N-terminal); homoserine dehydrogenase II (C-terminal), methionine sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PSHAb0528 asd; putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PSHAa2078 asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PSHAa2378 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PSHAa2377 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PSHAb0295 ltaE; Low-specificity L-threonine aldolase (Low-specificity L-TA) K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PSHAa2376 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PSHAa2619 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PSHAa2153 putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PSHAa0366 gpmM; phosphoglycerate mutase III, cofactor-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PSHAb0379 putative protein with predicted kinase domain K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D PSHAa0666 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PSHAa1422 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PSHAa0661 serB; putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PSHAa2316 kbl; 2-amino-3-ketobutyrate CoA ligase (AKB ligase, glycine acetyltransferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PSHAa2315 tdh; threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PSHAa2473 gcvP; glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PSHAa2475 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa2474 gcvH; glycine cleavage system H protein, carrier of aminomethyl moiety via covalently bound lipoyl cofactor K02437 gcvH; glycine cleavage system H protein
D PSHAa1719 Phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PSHAb0418 betA; putative choline dehydrogenase (flavoprotein) K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PSHAb0419 betB; NAD+-dependent betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PSHAa1163 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PSHAa2768 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PSHAa1288 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PSHAa1289 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pha00270]
D PSHAa0645 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PSHAa1918 cysK; O-acetylserine sulfhydrylase, PLP-dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PSHAa1925 metC; cystathionine beta-lyase, PLP-dependent (beta-cystathionase) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PSHAa2222 putative B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (C terminal) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PSHAa2223 putativeB12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (N terminal) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PSHAa1470 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PSHAa0670 metK; methionine adenosyltransferase 1 (AdoMet synthetase) K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PSHAa0199 speD; S-adenosylmethionine decarboxylase, proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PSHAb0034 putative spermine/spermidine synthase protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa2847 speE; Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (SPDSY) K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa0040 putative spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa0173 conserved protein of unknown function; some similarity with spermidine synthase (could be an aminopropyltransferase) K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa0547 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; MtnN K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PSHAa0934 conserved protein of unknown function K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PSHAa2922 putative aldolase or epimerase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D PSHAa2044 mdeA; probable Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PSHAa1681 conserved protein of unknown function K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PSHAa0955 conserved protein of unknown function K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PSHAa2700 dcyD; putative D-cysteine desulfhydrase, PLP-dependent enzyme K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D PSHAa0533 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PSHAa1250 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PSHAa2379 thrA; Bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PSHAa2722 metL; bifunctional: aspartokinase II (N-terminal); homoserine dehydrogenase II (C-terminal), methionine sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PSHAb0528 asd; putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PSHAa2078 asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PSHAa2224 metA; Homoserine O-succinyltransferase (Homoserine O-transsuccinylase) (HTS) K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PSHAa2945 metX; putative homoserine O-acetyltransferase (EC 2.3. 1.31) K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PSHAa2723 metB; cystathionine gamma-synthase, PLP-dependent K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PSHAb0477 putative cystathionine gamma-synthase or beta-lyase, PLP-dependent K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PSHAa1270 ilvE; putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PSHAb0107 gshA; Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PSHAa0937 gshA; glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PSHAa2599 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PSHAa0459 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PSHAa2658 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PSHAa1163 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PSHAa0666 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PSHAa1422 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pha00280]
D PSHAa1270 ilvE; putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PSHAa1167 bcd; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PSHAa1632 BckdhA; 2-oxoisovalerate dehydrogenase alpha subunit (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (BCKDE1A) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PSHAa1631 bkdA2; 2-oxoisovalerate dehydrogenase beta subunit (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PSHAa1630 dbT; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (Dihydrolipoyllysine-residue(2-methylpropanoyl)transferase E2) (Dihydrolipoamide branched chain transacylase) (BCKAD E2 subunit) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa1452 Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa0966 fadI; beta-keto thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa0010 fadA; 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 2.3.1.16 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa1459 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PSHAa1455 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PSHAa1449 urea carboxylase (alpha subunit) K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D PSHAa1451 beta subunit of a coenzyme A carboxylases family protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D PSHAa1450 putative enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D PSHAa1448 hmgcL; Hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase) K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PSHAa1447 succinyl-CoA transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PSHAa2943 putative succinyl-CoA transferase, alpha subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PSHAa2942 putative succinyl-CoA transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PSHAa1446 atoA; succinyl-CoA transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pha00290]
D PSHAa2768 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PSHAa2892 leuC; 3-isopropylmalate isomerase, subunit with LeuD K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PSHAa2891 leuD; 3-isopropylmalate isomerase, subunit with LeuC K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PSHAa2893 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PSHAa2771 ilvG; Acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PSHAb0464 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PSHAb0463 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PSHAa2770 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PSHAa0849 ilvC; ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PSHAb0129 putative dihydroxyacid dehydratase (ilvD-like) K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PSHAa2769 ilvD; dihydroxyacid dehydratase; possibly homodimieric K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PSHAa1270 ilvE; putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PSHAa1167 bcd; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PSHAa1703 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PSHAa1323 yfbQ; putative PLP-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PSHAa2894 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pha00300]
D PSHAa0533 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PSHAa1250 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PSHAa2379 thrA; Bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PSHAa2722 metL; bifunctional: aspartokinase II (N-terminal); homoserine dehydrogenase II (C-terminal), methionine sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PSHAb0528 asd; putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PSHAa2078 asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PSHAb0390 putative dihydrodipicolinate synthase (dapA-like) K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PSHAa0180 dapA; putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PSHAa1227 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PSHAa2039 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PSHAa0179 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PSHAa0194 astC; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PSHAb0428 putative acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PSHAa1331 dapE; Succinyl-diaminopimelate desuccinylase (SDAP) K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PSHAa0092 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PSHAa0093 lysA; putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PSHAa0178 dcdA; diaminopimelate decarboxylase, PLP-binding K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PSHAa2509 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PSHAa2508 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pha00310]
D PSHAa1646 sucB; dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2665 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa2402 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa1590 6-oxohexanoate dehydrogenase, succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAb0556 ydiJ; putative Fe-S oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:pha00220]
D PSHAa2289 argF; Ornithine carbamoyltransferase (OTCase) K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PSHAa2288 argG; Argininosuccinate synthase (Citrulline--aspartate ligase) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PSHAa2287 argHA; Bifunctional protein argHA [Argininosuccinate lyase (Arginosuccinase) (ASAL) and Amino-acid acetyltransferase (N-acetylglutamate synthase)(AGS)(NAGS)] K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D PSHAa1759 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PSHAa1758 ureB; urease beta subunit (Urea amidohydrolase) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PSHAa1757 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PSHAa2335 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PSHAa0166 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSHAa1670 putative glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PSHAa1392 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PSHAa1323 yfbQ; putative PLP-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PSHAa2290 argB; acetylglutamate kinase (NAG kinase) (AGK) (N-acetyl-L-glutamate 5-phosphotransferase) K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PSHAa2291 argC; N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PSHAa0194 astC; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PSHAb0428 putative acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PSHAa2292 argE; acetylornithine deacetylase (Acetylornithinase) (AO) (N-acetylornithinase) (NAO) K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pha00330]
D PSHAa2846 speA; arginine decarboxylase, PLP-binding, biosynthetic K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PSHAa1075 speA; arginine decarboxylase, PLP-binding, biosynthetic K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PSHAa1094 putative basic aminoacid decarboxylase (could be ornithine decarboxylase) K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PSHAa1076 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PSHAb0317 putative manganese binding agmatinase (SpeB) K01480 speB; agmatinase [EC:3.5.3.11]
D PSHAa1835 Beta-ureidopropionase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PSHAb0034 putative spermine/spermidine synthase protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa2847 speE; Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (SPDSY) K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa0040 putative spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa0173 conserved protein of unknown function; some similarity with spermidine synthase (could be an aminopropyltransferase) K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa0199 speD; S-adenosylmethionine decarboxylase, proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PSHAb0427 putative arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PSHAa0195 astA; arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PSHAb0177 astB; putative succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D PSHAa0196 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D PSHAb0426 putative succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D PSHAa1633 putative Succinylglutamate desuccinylase AstE K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D PSHAa2605 proC; Pyrroline-5-carboxylate reductase (NAD(P)-binding) K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PSHAa2264 putA; bifunctional putA protein: Proline dehydrogenase (Proline oxidase) and Delta-1-pyrroline-5-carboxylate dehydrogenase(P5C dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PSHAb0543 putative ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D PSHAa0633 proB; glutamate-5 kinase(Gamma-glutamyl kinase)(GK) K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PSHAa0279 proB; putative glutamate 5-kinase (Gamma-glutamyl kinase) K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PSHAa0280 proA; Gamma-glutamyl phosphate reductase (GPR) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pha00340]
D PSHAb0494 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PSHAb0482 hisI; bifunctional: phosphoribosyl-AMP cyclohydrolase (N-terminal); phosphoribosyl-ATP pyrophosphatase (C-terminal) K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PSHAb0489 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PSHAb0490 hisH; Imidazole glycerol phosphate synthase subunit hisH (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PSHAb0483 hisF; imidazole glycerol phosphate synthase, subunit with HisH; may channel ammonium K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PSHAb0491 hisB; modular bifunctional: histidinol-phosphatase (N-terminal); imidazoleglycerol-phosphate dehydratase (C-terminal) K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D PSHAb0492 hisC; histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PSHAb0493 hisD; bifunctional HisD: L-histidinal:NAD+ dehydrogenase; L-histidinol:NAD+ dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PSHAb0401 Histidine ammonia-lyase (hutT-like) K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PSHAa2740 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PSHAa2739 hutU; Urocanate hydratase (Urocanase, imidazolonepropionate hydrolase) K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PSHAa2737 hutI; Imidazolonepropionase (imidazolone-5-propionate hydrolase) K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PSHAa2735 hutG; Formiminoglutamate hydrolase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D PSHAa1438 conserved protein of unknown function K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:pha00350]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PSHAb0492 hisC; histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PSHAa2168 melA; 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PSHAb0338 hmgA; Homogentisate 1,2-dioxygenase (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) [HGD] K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PSHAb0337 maiA; Maleylacetoacetate isomerase (MAAI) (Glutathione S-transferase zeta 1) (GSTZ1-1) K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PSHAa2169 faH; Fumarylacetoacetase (Fumarylacetoacetate hydrolase) (Beta-diketonase)(FAA) K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PSHAa2213 adhC; alcohol dehydrogenase class III (Glutathione-dependent formaldehyde dehydrogenase)(FDH) (FALDH) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1386 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAb0511 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PSHAa0329 putative 5-carboxymethyl-2-hydroxymuconate delta isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D PSHAa2665 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa2402 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa1590 6-oxohexanoate dehydrogenase, succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:pha00360]
D PSHAa2043 phhA; Phenylalanine-4-hydroxylase (EC 1.14.16.1) (PAH) (Phe-4-monooxygenase) K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0399 bhbD; 3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PSHAb0492 hisC; histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PSHAa2168 melA; 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
C 00380 Tryptophan metabolism [PATH:pha00380]
D PSHAa0055 putative pyridoxal phosphate dependent enzyme; may have an iron-sulfur cluster K01556 KYNU; kynureninase [EC:3.7.1.3]
D PSHAa1646 sucB; dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1737 putative catalase K03781 katE; catalase [EC:1.11.1.6]
D PSHAb0205 katB; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pha00400]
D PSHAb0559 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PSHAa2714 aroB; dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PSHAa0264 aroQ; 3-dehydroquinate dehydratase (EC 4.2.1.10) (3-dehydroquinase) (Type II DHQase) K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PSHAa0031 aroE; 5-dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PSHAa2715 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PSHAa1423 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PSHAa0983 aroC; chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PSHAa1293 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PSHAa1292 trpG; Anthranilate synthase component II (Glutamine amido-transferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PSHAa1291 trpD; Anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D PSHAa1290 trpCF; bifunctional: indole-3-glycerolphosphate synthetase (N-terminal); N-(5-phosphoribosyl)anthranilate isomerase (C-terminal) K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D PSHAa1288 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PSHAa1289 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PSHAa0949 tyrA; bifunctional protein [Includes: chorismate mutase T (N-terminal); prephenate dehydrogenase (C-terminal)] K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PSHAa0950 pheA; bifunctional protein [Includes: chorismate mutase P (N-terminal); prephenate dehydratase (C-terminal)] K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PSHAb0492 hisC; histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PSHAa2043 phhA; Phenylalanine-4-hydroxylase (EC 1.14.16.1) (PAH) (Phe-4-monooxygenase) K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pha00410]
D PSHAa0601 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa1455 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pha00430]
D PSHAa1566 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PSHAa1718 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PSHAa1670 putative glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pha00450]
D PSHAa2723 metB; cystathionine gamma-synthase, PLP-dependent K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PSHAa1925 metC; cystathionine beta-lyase, PLP-dependent (beta-cystathionase) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PSHAa2222 putative B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (C terminal) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PSHAa2223 putativeB12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (N terminal) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PSHAa1470 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PSHAa2044 mdeA; probable Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PSHAa1654 csdA; putative Cysteine sulfinate desulfinase (CSD) K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PSHAa1720 trxB; thioredoxin reductase, FAD/NAD(P)-binding K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PSHAa0211 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PSHAa0212 cysD; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PSHAa1317 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pha00460]
D PSHAa1566 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PSHAa1408 ansA; L-asparaginase I(L-asparagine amidohydrolase I) (L-ASNase I) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PSHAa1143 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PSHAa2796 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PSHAa2376 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pha00470]
D PSHAa2434 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D PSHAa2502 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PSHAa2335 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PSHAa0252 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PSHAa2506 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PSHAa0092 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PSHAa0093 lysA; putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PSHAa0178 dcdA; diaminopimelate decarboxylase, PLP-binding K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pha00480]
D PSHAa1566 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PSHAa0334 conserved protein of unknown function K00682 GGCT; gamma-glutamylcyclotransferase [EC:4.3.2.9]
D PSHAb0064 putative lactam utilization protein B K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PSHAa1443 conserved protein of unknown function; putative allophanate hydrolase domain involved in regulation K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D PSHAa1442 putative allophanate hydrolase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D PSHAb0107 gshA; Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PSHAa0937 gshA; glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PSHAa2599 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PSHAb0302 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PSHAa2388 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PSHAa2423 pepA; cytosol aminopeptidase (Leucine aminopeptidase, Leucyl aminopeptidase) K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PSHAa1484 putative cytosol aminopeptidase 1 (EC 3.4.11.1) (Leucine aminopeptidase 1) (LAP 1) (Leucyl aminopeptidase 1) K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PSHAa0608 pepB; aminopeptidase B, a cysteinylglycinase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D PSHAa1676 pepN; aminopeptidase N, a cysteinylglycinase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PSHAa2204 putative hydrolase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PSHAb0017 putative Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PSHAa2489 putative glutathione S-transferase enzyme with thioredoxin-like domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PSHAa0526 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PSHAb0122 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PSHAa0360 gor; Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PSHAa1727 Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PSHAa1303 icd; isocitrate dehydrogenase, specific for NADP+ K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PSHAa1407 putative gluconate-6-phosphate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PSHAa1140 zwf; Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1. 49) (G6PD) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PSHAa2487 glutathione peroxidase precursor K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PSHAa0062 glutathione peroxidase possibly involved in repair of phospholipid hydroperoxides K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PSHAa1253 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PSHAa0759 putative peroxiredoxin/glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D PSHAa2650 ahpC; Peroxiredoxin, AhpC/Tsa family K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D PSHAb0034 putative spermine/spermidine synthase protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa2847 speE; Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (SPDSY) K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa0040 putative spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa0173 conserved protein of unknown function; some similarity with spermidine synthase (could be an aminopropyltransferase) K00797 speE; spermidine synthase [EC:2.5.1.16]
D PSHAa2455 gssA; bifunctional: glutathionylspermidine amidase (N-terminal); glutathionylspermidine synthetase (C-terminal) K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pha00511]
D PSHAb0159 putative sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis [PATH:pha00540]
D PSHAa2024 lpxA; Lipid A biosynthesis, UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PSHAa2498 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (UDP-3-O-acyl-GlcNAc deacetylase) K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PSHAa2026 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PSHAa2067 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PSHAa2017 lpxB; tetraacyldisaccharide-1-P synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PSHAa1660 lpxK; tetraacyldisaccharide 4' kinase (lipid A 4'kinase) K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PSHAa2546 ksdD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PSHAa1063 kdsA; 3-deoxy-D-manno-octulosonic acid 8-P synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PSHAa2547 kdsC; 3-Deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PSHAa1658 kdsB; CTP:CMP-3-deoxy-D-manno-octulosonate transferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PSHAa2325 kdtA; putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PSHAa2593 lpxL; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PSHAa2772 eptA; lipid A phosphoethanolamine transferase, associated with polymyxin resistance K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PSHAa1128 conserved protein of unknown function K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PSHAb0144 conserved protein of unknown function; putative secreted protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PSHAa2319 putative lipopolysaccharide kinase family K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D PSHAa2324 putative phosphoheptose isomerase family K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PSHAa2323 rfaE; bifunctional ADP-L-glycero-D-manno-heptose synthase: putaive kinase (N-terminal); putative sugar nucleotide transferase (C-terminal) K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PSHAa2317 gmhB; heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pha00541]
D PSHAa0750 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSHAa0469 galE; UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PSHAa0444 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PSHAa2920 cpsB; putative mannose-1-phosphate guanyltransferase, colanic acid synthesis K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PSHAa3006 glmU; bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PSHAa0466 rffE; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PSHAa0401 putative polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:pha00550]
D PSHAa2538 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PSHAa2914 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PSHAa2503 murC; UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PSHAa2506 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PSHAa2509 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PSHAa2502 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PSHAa2508 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PSHAa2032 ispU; undecaprenyl pyrophosphate synthetase (UPP synthetase) (Di-trans-poly-cis-decaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PSHAb0269 Undecaprenyl-diphosphatase (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PSHAa2300 putative Undecaprenol kinase (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PSHAa2507 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PSHAa2504 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PSHAa2721 mrcA; Murein polymerase, bifunctional murein transglycosylase (N-terminal) and transpeptidase (C-terminal); penicillin-binding protein PBP1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PSHAa2256 mrcB; Murein polymerase, bifunctional murein transglycosylase and transpeptidase; penicillin-binding protein PBP1B; dimeric K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PSHAa1025 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PSHAa2510 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PSHAa1022 dacA; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PSHAa0522 conserved protein of unknown function; putative peptidase with beta-lactamase domain (partial match) K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:pha00552]
D PSHAb0269 Undecaprenyl-diphosphatase (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PSHAa2300 putative Undecaprenol kinase (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PSHAa0401 putative polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pha00543]
D PSHAa1783 wcaJ; UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D PSHAa0645 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pha00730]
D PSHAa0480 thiC; thiamine biosynthesis protein thiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PSHAa0484 thiDE; putative phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D PSHAb0099 iscS; Cysteine desulfurase (ThiI) (transpersulfidase) (NifS protein homolog) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa2671 iscS; cysteine desulfurase (tRNA sulfurtransferase; RNA 4-thiouridine sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa1138 putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa2280 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PSHAa0481 thiO; putative thiamine biosynthesis oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PSHAa2366 dxs; 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase) K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PSHAa0483 thiG; thiazole biosynthesis protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PSHAa2369 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PSHAa0487 putative GTPase engC precursor K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PSHAa2976 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa2977 secreted alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAb0500 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa1208 adk; adenylate kinase(ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pha00740]
D PSHAa0529 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PSHAa2372 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PSHAa2374 ribD; Riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PSHAa0089 putative enzyme with a phosphatase-like domain K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D PSHAa1233 ribB; 3,4 dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D PSHAa2371 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PSHAa2373 ribE; Riboflavin synthase subunit E K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PSHAa1734 ribC; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PSHAa0917 ribF; bifunctional protein [Includes: Riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)] K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PSHAa0104 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D PSHAa2591 nudF; ADP-ribose pyrophosphatase (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (ASPPase) K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PSHAa2298 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pha00750]
D PSHAa0658 pdxH; pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PSHAa0594 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D PSHAa2079 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D PSHAa1422 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PSHAa2634 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase,(4-(phosphohydroxy)-L-threonine dehydrogenase) K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PSHAa0735 pdxJ; pyridoxine 5'-phosphate (PNP) synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PSHAa2377 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pha00760]
D PSHAa0725 nadB; quinolinate synthetase, B protein (L-aspartate oxidase) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PSHAb0019 putative dinucleotide-utilizing enzyme K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D PSHAa1866 nadA; quinolinate synthetase, A protein K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PSHAa0386 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PSHAb0082 deoD; Purine nucleoside phosphorylase (Inosine phosphorylase) (PNP) K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PSHAb0345 ushA; Protein ushA precursor [Includes: UDP-sugar hydrolase (UDP-sugar diphosphatase) (UDP-sugar pyrophosphatase); 5'-nucleotidase (5'-NT)] K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PSHAa2167 putative esterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PSHAa0687 surE; acid phosphatase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PSHAa1028 nadD; nicotinic acid mononucleotide adenylyltransferase, NAD(P)-requiring K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PSHAa0740 mazG; Nucleoside triphosphate pyrophosphohydrolase, non-specific K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PSHAa1926 putative NTP pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PSHAa0075 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PSHAa0693 conserved protein of unknown function; putative CinA, C-terminal Domain K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PSHAb0168 putative sirtuin K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PSHAa1220 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PSHAa2898 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D PSHAa2665 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa2402 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PSHAa1590 6-oxohexanoate dehydrogenase, succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pha00770]
D PSHAa2771 ilvG; Acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PSHAb0464 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PSHAb0463 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PSHAa2770 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PSHAa0849 ilvC; ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PSHAb0129 putative dihydroxyacid dehydratase (ilvD-like) K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PSHAa2769 ilvD; dihydroxyacid dehydratase; possibly homodimieric K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PSHAa0602 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PSHAa2279 putative 2-dehydropantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PSHAa0601 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PSHAa2912 putative transcriptional regulatory protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PSHAa2644 dfp; bifunctional: 4'-phosphopantothenoylcysteine decarboxylase (N); phosphopantothenoylcysteine synthetase (C), FMN-binding K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PSHAa0740 mazG; Nucleoside triphosphate pyrophosphohydrolase, non-specific K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PSHAa2282 coaD; Phosphopantetheine adenylyltransferase (PPAT) (Dephospho-CoA pyrophosphorylase) K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PSHAa0379 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PSHAa1251 putative orphan protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PSHAa2467 conserved protein of unknown function K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D PSHAa1270 ilvE; putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PSHAa2293 putative cysteine sulfinic acid decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:pha00780]
D PSHAa1607 bioC; desthiobiotin biosynthesis; reaction prior to pimeloyl CoA K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PSHAa2080 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PSHAb0407 putative 3-oxoacyl-(Acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PSHAa1806 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PSHAb0410 putative 3-oxoacyl-[acyl-carrier-protein] synthase II (fabF-like) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PSHAa2151 putative reductase or dehydrogenase protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAb0409 putative 3-oxoacyl-[acyl-carrier-protein] reductase (fabG-like) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa0894 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1808 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1460 putative 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa2025 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PSHAa2857 bioH; putative enzyme in pimeloyl-CoA (biotin precursor) synthesis with alpha/beta-hydrolase domain K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PSHAa1608 bioF; 8-amino-7-oxononanoate synthase (7-keto-8-aminopelargonic acid synthetase) K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PSHAa1610 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase (7,8-diaminopelargonic acid synthetase), PLP-dependent K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PSHAa1606 bioD; desthiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PSHAa1609 bioB; biotin synthase; contains an iron-sulfur cluster and PLP K01012 bioB; biotin synthase [EC:2.8.1.6]
D PSHAa2913 birA; biotin-[protein] holoenzyme synthetase; possibly (by homology) transcriptional repressor of biotin synthesis (BirA family) K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pha00785]
D PSHAa1020 lipB; Lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PSHAa1019 lipA; Lipoyl synthase (Lipoic acid synthase) (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0391 aceE; pyruvate dehydrogenase, decarboxylase subunit, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PSHAa0392 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PSHAa1647 sucA; 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PSHAa1646 sucB; dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PSHAa1632 BckdhA; 2-oxoisovalerate dehydrogenase alpha subunit (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (BCKDE1A) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PSHAa1631 bkdA2; 2-oxoisovalerate dehydrogenase beta subunit (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PSHAa1630 dbT; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (Dihydrolipoyllysine-residue(2-methylpropanoyl)transferase E2) (Dihydrolipoamide branched chain transacylase) (BCKAD E2 subunit) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PSHAa2473 gcvP; glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PSHAa2475 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PSHAa2474 gcvH; glycine cleavage system H protein, carrier of aminomethyl moiety via covalently bound lipoyl cofactor K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pha00790]
D PSHAa0073 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PSHAa0549 conserved protein of unknown function K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PSHAa2976 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa2977 secreted alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAb0500 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa1860 phoD; putative alkaline phosphatase D (APaseD) K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PSHAa2302 folB; dihydroneopterin aldolase (DHNA) K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PSHAa0603 folK; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PSHAa2301 putative phosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PSHAa0871 folP; Dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase) K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PSHAa2653 folA; dihydrofolate reductase type I, trimethoprim resistance K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PSHAa2073 folC; bifunctional: folylpolyglutamate synthase; dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PSHAa0529 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PSHAa2372 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PSHAa0192 pabA; putative glutamine amidotransferase; putatively involved in paraminobenzoate biosynthesis K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D PSHAa1165 pabB; aminodeoxychorismate synthase subunit I, component of p-aminobenzoate synthase multienzyme complex K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PSHAa1805 pabC; 4-amino-4-deoxychorismate lyase (aminotransferase), component of p-aminobenzoate synthase multienzyme complex K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PSHAa0072 folX; D-erythro-7,8-dihydroneopterin aldolase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D PSHAa0074 folM; putative alternative dihydrofolate reductase, NAD(P)-binding domain K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D PSHAa2042 phhB; Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PSHAa2043 phhA; Phenylalanine-4-hydroxylase (EC 1.14.16.1) (PAH) (Phe-4-monooxygenase) K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PSHAa1117 queC; queC protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PSHAa1116 putative regulator protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PSHAa1980 queD; putative queD protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:pha00670]
D PSHAa2653 folA; dihydrofolate reductase type I, trimethoprim resistance K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PSHAa0074 folM; putative alternative dihydrofolate reductase, NAD(P)-binding domain K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D PSHAa2064 folD; bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PSHAa2376 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PSHAa1948 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PSHAa0345 purH; bifunctional purine biosynthesis protein purH[Includes:IMP cyclohydrolase (Inosinicase) (IMP synthetase) (ATIC);Phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) ] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PSHAa0022 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PSHAa2475 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PSHAa2222 putative B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (C terminal) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PSHAa2223 putativeB12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (N terminal) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PSHAa0749 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PSHAa0701 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PSHAa0668 putative carbon-nitrogen ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pha00860]
D PSHAa0635 gltX; Glutamyl-tRNA synthetase (Glutamate-tRNA ligase) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PSHAa1057 hemA; glutamyl tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PSHAa2255 hemL; Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PSHAa2935 hemB; 5-aminolevulinate dehydratase (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PSHAa0098 hemC; hydroxymethylbilane synthase (porphobilinogen deaminase) K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PSHAa2899 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PSHAa0029 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PSHAa2749 hemN; coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H dependent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PSHAa2253 putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D PSHAb0112 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PSHAa0099 hemDX; uroporphyrinogen-III synthase HemD (N terminal)/Uroporphyrin-III C-methyltransferase (C terminal) K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D PSHAa0213 cysG; multifunctional siroheme synthase: uroporphyrinogen methyltransferase; 1,3-dimethyluroporphyriongen III dehydrogenase; siroheme ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PSHAa2227 cyoE; protoheme IX farnesyltransferase (Heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
D PSHAa2865 Polyprenyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PSHAa2866 putative Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PSHAa2563 btuR; cob(I)alamin and cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PSHAa2564 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PSHAa0546 putative cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PSHAa2997 cobU; bifunctional adenosylcobalamin biosynthesis protein cobU [Includes: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase ] K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PSHAa2998 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PSHAa2999 cobT; nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PSHAa3000 putative enzymatic protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D PSHAb0283 bfr; bacterioferritin (Cytochrome B-1) (Cytochrome B-557) K03594 bfr; bacterioferritin [EC:1.16.3.1]
D PSHAb0284 bfr; bacterioferritin (Cytochrome B-1) (Cytochrome B-557) K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pha00130]
D PSHAa2311 putative chorismate pyruvate lyase UbiC K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D PSHAa2310 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PSHAa0105 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxylyase; ubiquinone biosynthesis, third step K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PSHAa2298 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PSHAa0564 visC; putative monooxygenase, FAD/NAD(P)-binding domain K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D PSHAa1420 ubiG; bifunctional: 3-demethylubiquinone-9 3-methyltransferase; 2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PSHAa0563 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PSHAa2926 ubiE; bifunctional protein [Includes: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; S-adenosylmethionine (2-DMK methyltransferase)] K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PSHAa1047 ubiF; 2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D PSHAa2875 conserved protein of unknown function highly conserved in gamma-proteobacteria K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PSHAa1132 Trp repressor binding protein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PSHAa2168 melA; 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pha00900]
D PSHAa2366 dxs; 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase) K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PSHAa2030 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PSHAa0684 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PSHAa1055 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PSHAa0685 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECPS) (MECDP-synthase) K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PSHAb0138 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PSHAa0921 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2298 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PSHAa2365 ispA; geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PSHAa2657 ispB; Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PSHAa2032 ispU; undecaprenyl pyrophosphate synthetase (UPP synthetase) (Di-trans-poly-cis-decaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:pha00907]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa1448 hmgcL; Hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase) K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PSHAa0966 fadI; beta-keto thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa0010 fadA; 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 2.3.1.16 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PSHAa0671 tktA; transketolase 1 (TK 1) K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D PSHAa0080 putative secreted hydrolase K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PSHAa0079 putative hydrolase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:pha00332]
D PSHAa0633 proB; glutamate-5 kinase(Gamma-glutamyl kinase)(GK) K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PSHAa0279 proB; putative glutamate 5-kinase (Gamma-glutamyl kinase) K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PSHAa0280 proA; Gamma-glutamyl phosphate reductase (GPR) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pha00261]
D PSHAa0211 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PSHAa0212 cysD; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PSHAa0533 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PSHAa1250 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PSHAa2379 thrA; Bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PSHAa2722 metL; bifunctional: aspartokinase II (N-terminal); homoserine dehydrogenase II (C-terminal), methionine sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PSHAb0528 asd; putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PSHAa2078 asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PSHAb0390 putative dihydrodipicolinate synthase (dapA-like) K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PSHAa0180 dapA; putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PSHAa1227 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pha00521]
D PSHAa1364 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PSHAa1634 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSHAa0323 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PSHAa1364 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:pha00401]
D PSHAa0949 tyrA; bifunctional protein [Includes: chorismate mutase T (N-terminal); prephenate dehydrogenase (C-terminal)] K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PSHAb0492 hisC; histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D PSHAa1353 conserved protein of unknown function; putative tryptophan halogenase family K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D PSHAa1293 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PSHAa1292 trpG; Anthranilate synthase component II (Glutamine amido-transferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PSHAa1809 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PSHAa2151 putative reductase or dehydrogenase protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAb0409 putative 3-oxoacyl-[acyl-carrier-protein] reductase (fabG-like) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa0894 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1808 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1460 putative 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PSHAb0394 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PSHAa1807 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PSHAb0393 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pha00999]
D PSHAa0670 metK; methionine adenosyltransferase 1 (AdoMet synthetase) K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PSHAa0031 aroE; 5-dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pha00362]
D PSHAa0966 fadI; beta-keto thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa0010 fadA; 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 2.3.1.16 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa1149 conserved protein of unknown function K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D PSHAa2141 xylJ; 2-hydroxypent-2,4-dienoate hydratase (HPH) (2-oxopent-4-enoate hydratase) K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D PSHAa2143 mhpE; 4-hydroxy-2-oxovalerate aldolase (HOA) K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D PSHAa2142 mhpF; Acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0540 oadB; Oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0399 bhbD; 3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pha00627]
D PSHAa2298 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:pha00364]
D PSHAa2188 putative hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pha00625]
D PSHAb0511 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PSHAa2213 adhC; alcohol dehydrogenase class III (Glutathione-dependent formaldehyde dehydrogenase)(FDH) (FALDH) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1386 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1832 Cryptic haloacid dehalogenase 1 (EC 3.8.1.2) (partial) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pha00361]
D PSHAa2188 putative hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PSHAa1149 conserved protein of unknown function K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D PSHAa1832 Cryptic haloacid dehalogenase 1 (EC 3.8.1.2) (partial) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:pha00623]
D PSHAa2188 putative hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:pha00622]
D PSHAa1149 conserved protein of unknown function K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D PSHAa2141 xylJ; 2-hydroxypent-2,4-dienoate hydratase (HPH) (2-oxopent-4-enoate hydratase) K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D PSHAa2143 mhpE; 4-hydroxy-2-oxovalerate aldolase (HOA) K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D PSHAa2142 mhpF; Acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
C 00633 Nitrotoluene degradation [PATH:pha00633]
D PSHAa2447 nemA; N-ethylmaleimide reductase, FMN-linked K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D PSHAa0880 putative NADPH dehydrogenase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D PSHAa1863 Oxidoreductase, FMN-binding K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D PSHAa0966 fadI; beta-keto thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PSHAa0010 fadA; 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 2.3.1.16 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:pha00643]
D PSHAb0338 hmgA; Homogentisate 1,2-dioxygenase (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) [HGD] K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PSHAb0337 maiA; Maleylacetoacetate isomerase (MAAI) (Glutathione S-transferase zeta 1) (GSTZ1-1) K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PSHAa2169 faH; Fumarylacetoacetase (Fumarylacetoacetate hydrolase) (Beta-diketonase)(FAA) K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PSHAa1149 conserved protein of unknown function K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D PSHAa0902 putative acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
D PSHAa1759 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PSHAa1758 ureB; urease beta subunit (Urea amidohydrolase) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PSHAa1757 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:pha00930]
D PSHAa0882 paaF; putative enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PSHAa0011 fadB; multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PSHAa0967 fadJ; bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:pha00621]
D PSHAa2141 xylJ; 2-hydroxypent-2,4-dienoate hydratase (HPH) (2-oxopent-4-enoate hydratase) K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D PSHAa2143 mhpE; 4-hydroxy-2-oxovalerate aldolase (HOA) K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D PSHAa2142 mhpF; Acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
C 00626 Naphthalene degradation [PATH:pha00626]
D PSHAb0511 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PSHAa2213 adhC; alcohol dehydrogenase class III (Glutathione-dependent formaldehyde dehydrogenase)(FDH) (FALDH) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PSHAa1386 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:pha00984]
D PSHAa2133 tesH; 3-ketosteroid-delta1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D PSHAa2137 putative protein with ferredoxin subunits K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D PSHAa0878 putative reductase protein K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D PSHAa0877 putative steroid degradation protein K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D PSHAa2140 tesA; TesA protein K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D PSHAa0900 tesB; putative dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D PSHAa0893 tesD; putative hydrolase acting on oxygenated substrates (epoxide hydrolase) K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17]
D PSHAa2132 putative AMP-binding protein K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41]
D PSHAa2146 putative oxidoreductase K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pha03020]
D PSHAa0222 rpoB; DNA-directed RNA polymerase beta chain (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PSHAa0223 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PSHAa2806 rpoA; DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PSHAa2791 rpoZ; DNA-directed RNA polymerase omega chain (EC 2.7. 7.6) (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pha03010]
D PSHAa1425 rpsA; 30S ribosomal subunit protein S1; site specific RNA helicase; component of the degradosome K02945 RP-S1; small subunit ribosomal protein S1
D PSHAa2036 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PSHAa0150 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PSHAa2807 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PSHAa2813 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PSHAa2443 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PSHAa0225 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PSHAa2816 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PSHAa2531 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PSHAa0143 rpsJ; 30S ribosomal subunit protein S10 (NusE protein) K02946 RP-S10; small subunit ribosomal protein S10
D PSHAa2808 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PSHAa0224 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PSHAa2809 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PSHAa2817 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PSHAa1000 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PSHAa0944 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PSHAa0153 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PSHAa2440 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PSHAa0148 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PSHAa0914 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PSHAa0352 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PSHAa0219 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PSHAa0147 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PSHAa0144 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PSHAa0145 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PSHAa2818 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PSHAa2815 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PSHAa0221 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PSHAa2439 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PSHAa0220 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PSHAa0218 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PSHAa2532 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PSHAa2820 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PSHAa2811 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PSHAa0151 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PSHAa2805 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PSHAa2814 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PSHAa0947 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PSHAa1399 rplT; 50S ribosomal subunit protein L20, also posttranslational autoregulator K02887 RP-L20; large subunit ribosomal protein L20
D PSHAa2656 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PSHAa0149 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PSHAa0146 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PSHAa2819 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PSHAa1053 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PSHAa2655 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PSHAa2642 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PSHAa0152 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PSHAa2812 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PSHAa2726 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PSHAa1811 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PSHAa2641 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PSHAa3026 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PSHAa1398 rpmI; 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D PSHAb0382 rpmJ; 50S ribosomal protein L36 (Ribosomal protein B) K02919 RP-L36; large subunit ribosomal protein L36
D PSHAa_rRNA16s6 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s7 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s1 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s3 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s4 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s5 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s9 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s8 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s2 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA23s9 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s8 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s5 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s3 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s4 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s2 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s6 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s1 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s7 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA5s5 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s3 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s9 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s10 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s7 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s2 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s4 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s8 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s1 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s6 5s K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pha00970]
D PSHAatRNA104 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSHAatRNA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSHAatRNA8 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSHAatRNA27 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSHAatRNA46 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA43 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA24 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA14 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA16 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA15 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA17 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA82 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSHAatRNA85 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSHAatRNA83 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSHAatRNA84 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSHAatRNA50 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA52 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA53 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA54 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA55 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA51 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA59 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA58 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA57 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA56 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA60 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA62 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PSHAatRNA67 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PSHAatRNA100 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSHAatRNA98 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSHAatRNA102 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSHAatRNA95 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSHAatRNA28 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA34 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA29 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA31 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA32 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA30 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA66 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA10 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA61 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA64 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA41 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA47 tRNA-His K14226 tRNA-His; tRNA His
D PSHAatRNA103 tRNA-His K14226 tRNA-His; tRNA His
D PSHAatRNA1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PSHAatRNA7 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PSHAatRNA25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA44 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA101 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA94 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA99 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA97 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA63 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA68 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA74 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA76 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA70 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA73 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA71 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA69 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA72 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA75 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA9 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA93 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA96 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA26 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA3 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA4 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA5 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA18 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PSHAatRNA22 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PSHAatRNA20 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PSHAatRNA45 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSHAatRNA49 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSHAatRNA48 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSHAatRNA38 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSHAatRNA77 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA105 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA79 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA35 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA78 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA106 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA13 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA42 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSHAatRNA19 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSHAatRNA39 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSHAatRNA21 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSHAatRNA23 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PSHAatRNA6 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PSHAatRNA40 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PSHAatRNA80 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PSHAatRNA81 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PSHAatRNA86 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA89 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA91 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA87 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA92 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA90 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA88 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA36 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA37 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAa0635 gltX; Glutamyl-tRNA synthetase (Glutamate-tRNA ligase) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PSHAa0910 putative allophanate hydrolase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PSHAa1642 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PSHAa0532 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PSHAa1938 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PSHAa1616 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PSHAa0005 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PSHAa0006 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PSHAa1396 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PSHAa1712 serS; serine tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PSHAa2065 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PSHAa1317 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PSHAa0022 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PSHAa2425 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PSHAa1031 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PSHAa0918 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PSHAa0518 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PSHAa0656 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PSHAa1623 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PSHAb0137 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PSHAa1904 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PSHAa1903 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PSHAa2413 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSHAa0545 tyrZ; Tyrosyl-tRNA synthetase II K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSHAa2708 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pha03060]
D PSHAa2810 secY; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03076 secY; preprotein translocase subunit SecY
D PSHAa0216 secE; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03073 secE; preprotein translocase subunit SecE
D PSHAa0874 secG; protein-export membrane protein secG(General Secretory Pathway) K03075 secG; preprotein translocase subunit SecG
D PSHAa1374 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PSHAa0321 secD; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03072 secD; preprotein translocase subunit SecD
D PSHAa0322 secF; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D PSHAa1375 putative preprotein translocase SecF, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D PSHAa0320 yajC; putative preprotein translocase IISP family, membrane subunit K03210 yajC; preprotein translocase subunit YajC
D PSHAa3022 yidC; preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PSHAa2743 secA; preprotein translocase, ATPase secretion component (General Secretory Pathway) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PSHAa0369 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D PSHAa0942 ffh; 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PSHAa0354 ftsY; Cell division transporter substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PSHAa2929 tatA; twin-arginine translocase subunit, sec-independent protein export K03116 tatA; sec-independent protein translocase protein TatA
D PSHAa2930 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PSHAa2931 tatC; twin-arginine translocase subunit, sec-independent protein export K03118 tatC; sec-independent protein translocase protein TatC
D PSHAa1310 putative signal peptidase I family protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PSHAa0731 lepB; signal peptidase I (SPase I) (Leader peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PSHAa0919 lspA; lipoprotein signal peptidase (SPase II)(Prolipoprotein signal peptidase) K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pha04122]
D PSHAb0099 iscS; Cysteine desulfurase (ThiI) (transpersulfidase) (NifS protein homolog) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa2671 iscS; cysteine desulfurase (tRNA sulfurtransferase; RNA 4-thiouridine sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa1138 putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa0459 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PSHAa0009 sirA; small ubiquitous RNA-binding protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PSHAa1686 conserved protein of unknown function K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PSHAa1685 conserved protein of unknown function K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PSHAa1684 conserved protein of unknown function K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PSHAa1687 conserved protein of unknown function; putative anaerobic sulfite reductase gamma subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PSHAa1690 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PSHAa0485 thiF; putative adenylyltransferase; thiamine biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PSHAa2280 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PSHAa0482 thiS; putative ThiS protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pha03018]
D PSHAa0745 nudH; (Di)nucleoside polyphosphate hydrolase (Ap5A pyrophosphatase) K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PSHAa1816 rne; RNase E: endoribonuclease for rRNA processing and mRNA degradation; member of the degradosome; involved in the production of deoxyribonucleotides via the formation of NDPs K08300 rne; ribonuclease E [EC:3.1.26.12]
D PSHAa0114 rhlB; ATP-dependent RNA helicase with nucleoside triP hydrolase domain, putative cold-shock protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PSHAa0742 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSHAa1001 pnp; polynucleotide phosphorylase, has polyadenylase activity; part of the degradosome K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PSHAa1930 rhlE; putative ATP-dependent RNA helicase with P-loop hydrolase domain K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PSHAa0641 putative ATP-dependent RNA helicase(rhlE-like); DEAD-box protein family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PSHAb0411 rhlE; putative ATP-dependent RNA helicase with P-loop hydrolase domain; DEAD-box protein family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PSHAa2983 rhlE; DEAD-box protein family; putative ATP-dependent RNA helicase with P-loop hydrolase domain K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PSHAa2480 rnr; RNase R, 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PSHAa2981 cold-shock RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PSHAa0990 deaD; ATP-dependent RNA helicase, cold shock protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PSHAa2572 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PSHAb0119 putative helicase (recQ-like) K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PSHAa0112 rho; transcription termination factor Rho; polarity suppressor K03628 rho; transcription termination factor Rho
D PSHAb0357 dnaK; Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D PSHAa0259 groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSHAa0271 hfq; Host factor-I; polyA binding protein K03666 hfq; host factor-I protein
D PSHAa0604 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pha03030]
D PSHAa1435 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1963 dnaQ; DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa0589 putative DNA polymerase, exonuclease activity K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1996 conserved protein of unknown function; putative enzyme K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa2015 dnaE; DNA polymerase III, alpha subunit; the entire polymerase contains 10 subunits K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSHAa1201 putative DnaX, DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSHAa1802 holB; putative DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSHAa1029 holA; Putative DNA polymerase III, delta subunit, probably ATP hydrolase K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSHAa2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PSHAa0002 dnaN; DNA polymerase III, beta-subunit; processivity clamp of DNA polymerase III K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSHAa2435 dnaB; replicative DNA helicase; chromosome replication; chain elongation K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PSHAa0350 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PSHAa2705 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D PSHAa1964 rnhA; RNase HI, degrades RNA of DNA-RNA hybrids K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PSHAa2016 rnhB; RNAse HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PSHAa2757 polA; multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); 3'->5' polymerase; 3'->5' exonuclease (C-terminal) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PSHAa1083 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pha03410]
D PSHAa1099 nth; endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on 5-formyluracil and 5-hydroxymethyluracil K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PSHAa2561 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PSHAa0554 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PSHAa0447 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PSHAb0291 putative ADA regulatory protein (Regulatory protein of adaptative response) K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PSHAa0788 tag; putative 3-methyl-adenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PSHAa1339 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PSHAa2757 polA; multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); 3'->5' polymerase; 3'->5' exonuclease (C-terminal) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PSHAa0516 recJ; Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PSHAa1083 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pha03420]
D PSHAa1836 mfd; transcription-repair ATP-dependent coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PSHAa2707 uvrA; DNA excision repair enzyme subunit, with UvrBC K03701 uvrA; excinuclease ABC subunit A
D PSHAa1110 uvrB; ATP-dependent DNA excision repair enzyme UvrAC K03702 uvrB; excinuclease ABC subunit B
D PSHAa1915 uvrC; DNA repair enzyme together with UvrAB; incision nuclease subunit C; repair of UV damage to DNA K03703 uvrC; excinuclease ABC subunit C
D PSHAa0122 uvrD; DNA-dependent ATPase I and helicase II; highly similar to PSHA_1_2804 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSHAa1096 uvrD; DNA helicase II. K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSHAa2757 polA; multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); 3'->5' polymerase; 3'->5' exonuclease (C-terminal) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PSHAa1083 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pha03430]
D PSHAa0692 mutS; methyl-directed mismatch repair ATP-binding protein, dimer/tetramer, associates to MutL, triggers MutH activity on hemimethylated GATC K03555 mutS; DNA mismatch repair protein MutS
D PSHAa0269 mutL; Enzyme in GATC methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA K03572 mutL; DNA mismatch repair protein MutL
D PSHAa0743 mutH; methyl-directed mismatch repair protein with restriction endonuclease-like domain K03573 mutH; DNA mismatch repair protein MutH
D PSHAa0122 uvrD; DNA-dependent ATPase I and helicase II; highly similar to PSHA_1_2804 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSHAa1096 uvrD; DNA helicase II. K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSHAa1255 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PSHAa0647 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PSHAa2364 xseB; exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PSHAa0516 recJ; Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PSHAa2705 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D PSHAa2015 dnaE; DNA polymerase III, alpha subunit; the entire polymerase contains 10 subunits K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSHAa0002 dnaN; DNA polymerase III, beta-subunit; processivity clamp of DNA polymerase III K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSHAa1201 putative DnaX, DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSHAa1029 holA; Putative DNA polymerase III, delta subunit, probably ATP hydrolase K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSHAa1802 holB; putative DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSHAa1435 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1963 dnaQ; DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa0589 putative DNA polymerase, exonuclease activity K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1996 conserved protein of unknown function; putative enzyme K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PSHAa1083 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PSHAa2712 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pha03440]
D PSHAa0516 recJ; Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PSHAa2705 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D PSHAa0003 recF; gap repair protein with nucleoside triP hydrolase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction K03629 recF; DNA replication and repair protein RecF
D PSHAa0734 recO; DNA repair protein recO (Recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O)
D PSHAa1203 recR; recombination protein recR K06187 recR; recombination protein RecR
D PSHAa0694 recA; RecA protein (Recombinase A) K03553 recA; recombination protein RecA
D PSHAa2757 polA; multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); 3'->5' polymerase; 3'->5' exonuclease (C-terminal) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PSHAa1876 ruvA; Holliday junction helicase, subunit A K03550 ruvA; holliday junction DNA helicase RuvA
D PSHAa1875 ruvB; Holliday junction helicase, subunit B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PSHAa1877 ruvC; Holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PSHAa2799 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PSHAa1858 recB; exonuclease V, beta chain with recC and recD: 5' and 3' nuclease, ATPase, recombinase, helicase K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PSHAa1859 recC; exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PSHAa1857 recD; exonuclease V, alpha chain with recC and recD: 5' and 3' nuclease, ATPase, recombinase, helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PSHAa2015 dnaE; DNA polymerase III, alpha subunit; the entire polymerase contains 10 subunits K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSHAa0002 dnaN; DNA polymerase III, beta-subunit; processivity clamp of DNA polymerase III K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSHAa1201 putative DnaX, DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSHAa1029 holA; Putative DNA polymerase III, delta subunit, probably ATP hydrolase K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSHAa1802 holB; putative DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSHAa1435 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1963 dnaQ; DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa0589 putative DNA polymerase, exonuclease activity K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1996 conserved protein of unknown function; putative enzyme K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PSHAa2728 priA; Primosome factor Y, also called protein n'; ATP-dependent DNA helicase activity required for recA-dependent stable DNA replication mode; also involved in double-strand break repair K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PSHAa2441 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D PSHAa1993 conserved protein of unknown function K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pha03250]
D PSHAa2247 putative Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSHAb0347 putative Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
D PSHAa0972 putative peptidase K01408 IDE; insulysin [EC:3.4.24.56]
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pha02010]
D PSHAa2778 chlD; putative anion transport protein (ABC superfamily, ATP-binding protein) K05776 modF; molybdate transport system ATP-binding protein
D PSHAa1612 putative ABC-type transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D PSHAa2663 fbpA; Iron(III) ABC transporter, periplasmic iron(III)-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PSHAa2662 fbpB; Iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D PSHAa1613 putative ABC-type transport system, permease component K02011 afuB; iron(III) transport system permease protein
D PSHAa2661 fbpC; Iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PSHAa1614 putative ABC-type transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PSHAa2541 putative ABC-type transport system, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D PSHAa1129 putative transport protein (ABC superfamily, atp_bind and membrane) K07323 mlaC; phospholipid transport system substrate-binding protein
D PSHAa2542 putative transport protein (ABC superfamily, periplasmic binding component) K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PSHAa2543 putative transport protein (ABC superfamily, membrane) K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PSHAa2540 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D PSHAa2544 putative transport protein (ABC superfamily, atp-binding) K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PSHAa0599 putative phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D PSHAa0309 pstC; putative phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D PSHAa0310 pstA; putative phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D PSHAa0311 pstB; Phosphate import ATP-binding protein pstB(Phosphate-transporting ATPase)(ABC phosphate transporter) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PSHAa2051 sapA; putative ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PSHAa2052 sapB; peptide transport protein (ABC superfamily, membrane) K19227 sapB; cationic peptide transport system permease protein
D PSHAa2053 sapC; peptide transport protein (ABC superfamily, membrane) K19228 sapC; cationic peptide transport system permease protein
D PSHAa2054 sapD; peptide transport protein (ABC superfamily, atp_bind) K19229 sapD; cationic peptide transport system ATP-binding protein
D PSHAa2055 sapF; peptide transport protein (ABC superfamily, atp_bind) K19230 sapF; cationic peptide transport system ATP-binding protein
D PSHAa2562 putative ABC transporter, periplasmic substrate-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D PSHAa1625 putative ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D PSHAa1626 sodium ABC exporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D PSHAa1388 lolC; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein
D PSHAa1390 lolE; putative lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PSHAa1389 lolD; transport protein of inner membrane lipoproteins (ABC superfamily, ATP-binding) K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PSHAa0825 ccmD; heme exporter protein D (Cytochrome c-type biogenesis protein ccmD) K02196 ccmD; heme exporter protein D
D PSHAa0824 ccmC; heme exporter protein C (Cytochrome c-type biogenesis protein ccmC) K02195 ccmC; heme exporter protein C
D PSHAa0823 ccmB; heme exporter protein B, ABC superfamily (Cytochrome c-type biogenesis protein ccmB) K02194 ccmB; heme exporter protein B
D PSHAa0822 ccmA; heme exporter protein A, ABC superfamily (Cytochrome c-type biogenesis ATP-binding protein ccmA) K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PSHAa2422 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D PSHAa2421 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D PSHAa2550 putative transport protein (ABC superfamily, atp-binding protein) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PSHAa0356 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D PSHAa0355 ftsE; cell division protein (ABC transporteur superfamily, ATP_binding) K09812 ftsE; cell division transport system ATP-binding protein
D PSHAa1661 msbA; lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) In E.coli MsbA plays a role in lipid A and possibly glycerophospholipid transport K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PSHAa1372 putative ABC transporter, ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D PSHAa1698 putative ABC transporter, ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSHAa2022 cydC; cysteine transport (export) protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PSHAa2021 cydD; cysteine transport (export) protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:pha02060]
D PSHAa1333 putative PTS system protein (partial match) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PSHAa0746 ptsP; phosphoenolpyruvate-protein phosphotransferase ptsP (Phosphotransferase system, enzyme I) (Enzyme I-Ntr) K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PSHAa2555 npr; putative phosphocarrier protein NPr (HPr-like), nitrogen-related K08485 ptsO; phosphocarrier protein NPr
D PSHAa2553 ptsN; PTS family enzyme IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pha03070]
D PSHAa2592 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D PSHAa0232 exeD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PSHAa0231 gspC; putative general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D PSHAa0234 gspF; putative general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D PSHAa0235 gspG; putative general secretion pathway protein G [Precursor] K02456 gspG; general secretion pathway protein G
D PSHAa0236 gspH; putative general secretion pathway protein H precursor K02457 gspH; general secretion pathway protein H
D PSHAa0237 gspI; putative general secretion pathway protein I [precursor] K02458 gspI; general secretion pathway protein I
D PSHAa0238 gspJ; putative general secretion pathway protein J [Precursor] K02459 gspJ; general secretion pathway protein J
D PSHAa0239 gspK; putative general secretion pathway protein K02460 gspK; general secretion pathway protein K
D PSHAa0240 putative general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D PSHAa0241 putative general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D PSHAa0233 exeE; General secretion pathway protein E (Type II traffic warden ATPase) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PSHAa1374 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PSHAa0321 secD; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03072 secD; preprotein translocase subunit SecD
D PSHAa0322 secF; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D PSHAa1375 putative preprotein translocase SecF, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D PSHAa0216 secE; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03073 secE; preprotein translocase subunit SecE
D PSHAa0874 secG; protein-export membrane protein secG(General Secretory Pathway) K03075 secG; preprotein translocase subunit SecG
D PSHAa2810 secY; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03076 secY; preprotein translocase subunit SecY
D PSHAa0320 yajC; putative preprotein translocase IISP family, membrane subunit K03210 yajC; preprotein translocase subunit YajC
D PSHAa3022 yidC; preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PSHAa2743 secA; preprotein translocase, ATPase secretion component (General Secretory Pathway) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PSHAa0354 ftsY; Cell division transporter substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PSHAa0369 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D PSHAa0942 ffh; 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PSHAa2929 tatA; twin-arginine translocase subunit, sec-independent protein export K03116 tatA; sec-independent protein translocase protein TatA
D PSHAa2930 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PSHAa2931 tatC; twin-arginine translocase subunit, sec-independent protein export K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pha02020]
D PSHAa0598 phoR; phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PSHAa0597 phoB; phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PSHAa1145 Putative two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PSHAa2976 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa2977 secreted alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAb0500 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa1860 phoD; putative alkaline phosphatase D (APaseD) K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PSHAa0599 putative phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D PSHAa1282 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PSHAa1283 phoP; response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PSHAa2849 envZ; sensory histidine kinase (phosphorylase) in two-component regulatory system with OmpR, regulates ompF and ompC expression, senses osmolarity (OmpR family) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PSHAa2850 ompR; response regulator in two-component regulatory system with EnvZ, regulates ompF and ompC expression (OmpR family) K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PSHAa0374 putative sensor histidine kinase protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PSHAa0375 cpxR; Transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PSHAa0853 rstA; response regulator (activator) in two-component regulatory K07661 rstA; two-component system, OmpR family, response regulator RstA
D PSHAa2196 baeS; putative sensory transduction histidine kinase in two-component regulatory system with baeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PSHAa2195 baeR; Transcriptional regulatory protein in two-component regulatory system with baeS K07664 baeR; two-component system, OmpR family, response regulator BaeR
D PSHAb0013 cusS; sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PSHAb0012 cusR; transcriptional activator of copper resistance (two-component regulatory system with CusS) K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PSHAa0304 putative cation efflux system protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D PSHAa0305 cusA; cation efflux system protein cusA K07787 cusA; copper/silver efflux system protein
D PSHAb0161 putative sensory histidine kinase in two-component regulatory system K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PSHAb0162 DNA-binding response regulator of two-component system K07666 qseB; two-component system, OmpR family, response regulator QseB
D PSHAa0781 fliC; flagellin K02406 fliC; flagellin
D PSHAa0782 putative flagellin (fliC-like) K02406 fliC; flagellin
D PSHAa0809 fliA; Polar Flagellar-specific RNA polymerase sigma factor FliA (sigma F) K02405 fliA; RNA polymerase sigma factor FliA
D PSHAa0814 putative Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D PSHAa2363 motA; Flagellar motor component (Chemotaxis motA protein) K02556 motA; chemotaxis protein MotA
D PSHAa0131 putative response regulator in two-component regulatory system K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D PSHAa0550 arcB; aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PSHAa0551 arcA; aerobic respiration control protein arcA (Dye resistance protein) K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PSHAa2866 putative Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PSHAa0001 dnaA; DNA replication initiator protein, transcriptional regulator of replication and other genes; binds DNA at DnaA boxes, binds cardiolipin and other acidic phospholipids, binds ATP K02313 dnaA; chromosomal replication initiator protein
D PSHAa0627 putative sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PSHAa1565 sfcA; NAD-linked malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PSHAa0922 algZ; putative alginate biosynthesis protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PSHAa0923 algR; putative alginate biosynthesis regulatory protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D PSHAa1626 sodium ABC exporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D PSHAa1625 putative ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D PSHAa1592 uhpB; sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PSHAa1591 uhpA; response regulator (activator) in two-component regulatory system wtih UhpB, regulates uhpT expression (LuxR/UhpA family) K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D PSHAa0737 barA; sensor protein barA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PSHAa0556 putative sensory box histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PSHAa1916 uvrY; putative regulator in two-component regulatory system with BarA (LuxR/UhpA familiy) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PSHAa0534 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D PSHAa0865 ampC; putative beta-lactamase precursor K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PSHAa2124 putative orphan protein K07346 fimC; fimbrial chaperone protein
D PSHAa2038 glnD; uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PSHAa0931 glnB; regulatory protein (P-II) for nitrogen assimilation by glutamine synthetase (ATase) K04751 glnB; nitrogen regulatory protein P-II 1
D PSHAa0164 glnL; nitrogen availability sensory kinase (soluble) in two-component regulatory system with GlnG, nitrogen regulation (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PSHAa0163 glnG; response regulator in two-component regulatory system with GlnL, nitrogen regulation (EBP family) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PSHAa0166 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSHAa0136 atoE; putative short-chain fatty acid transport protein (scFAT family) K02106 atoE; short-chain fatty acids transporter
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAb0361 putative two-component regulatory system sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PSHAb0362 putative response regulator in two-component regulatory system (EBP family) K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PSHAa2551 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D PSHAa0384 ppdD; putative prepilin peptidase dependent protein D K02650 pilA; type IV pilus assembly protein PilA
D PSHAa0383 putative Pilus biogenesis protein tapA precursor K02650 pilA; type IV pilus assembly protein PilA
D PSHAa0620 putative sensory histidine kinase in regulatory system K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PSHAa0622 putative response regulator in two-component regulatory system K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PSHAa0767 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PSHAa0711 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2638 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2733 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa0848 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0121 putative Methyl-accepting or sensory transducer chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0277 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2387 putative chemotaxis sensory protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0518 putative Chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0184 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa0395 putative aerotaxis sensory transducer K03776 aer; aerotaxis receptor
D PSHAa0936 putative aerotaxis sensor receptor (Aer-like) K03776 aer; aerotaxis receptor
D PSHAa0818 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PSHAa0817 conserved protein of unknown function; putative cheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D PSHAa0812 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PSHAa0810 cheY; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAb0169 putative two domain protein: response regulator receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa0913 putative chemotaxis protein (cheY-like) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa1501 putative response regulator receiver in two-component signal transduction system K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa0813 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PSHAa0766 cheV; chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PSHAa0787 putative flagellar regulatory protein A (polar flagellae) K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PSHAa0789 putative sensory box sensor histidine kinase in two-component regulatory system K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PSHAa0790 flaM; putative Sigma-54 dependent response regulator; regulation of polar flagellae expression K10943 flrC; two-component system, response regulator FlrC
D PSHAa0162 conserved protein of unknown function K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PSHAa2335 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PSHAb0306 putative sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PSHAb0307 putative DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
D PSHAa2530 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PSHAa2529 ubiquinol-cytochrome c reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PSHAa2528 Ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PSHAa0285 putative cytochrome c4 family K08738 CYC; cytochrome c
D PSHAa1842 Cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PSHAa1843 putative Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PSHAa1844 putative Cbb3-type cytochrome oxidase, subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PSHAa1845 putative cytochrome c oxidase, subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PSHAa2018 cydA; cytochrome d terminal oxidase, polypeptide subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PSHAa2019 cydB; cytochrome d terminal oxidase, polypeptide subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PSHAa2020 conserved protein of unknown function K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D PSHAa2592 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D PSHAa0527 putative low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PSHAa0466 rffE; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PSHAa1825 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PSHAa0052 hypothetical tryptophan-rich sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PSHAb0275 putative signal transduction histidine kinase two-component system with Protein-glutamate methylesterase domain K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PSHAa0954 putative response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D PSHAa0953 putative anti-sigma factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D PSHAa0764 flgM; putative negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PSHAa2530 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pha02024]
D PSHAa0271 hfq; Host factor-I; polyA binding protein K03666 hfq; host factor-I protein
D PSHAa1293 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PSHAa1292 trpG; Anthranilate synthase component II (Glutamine amido-transferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PSHAb0559 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PSHAb0161 putative sensory histidine kinase in two-component regulatory system K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PSHAb0162 DNA-binding response regulator of two-component system K07666 qseB; two-component system, OmpR family, response regulator QseB
D PSHAa0620 putative sensory histidine kinase in regulatory system K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PSHAa0622 putative response regulator in two-component regulatory system K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PSHAb0502 fadD; acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSHAa0162 conserved protein of unknown function K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PSHAa0493 zur; Zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PSHAa0529 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PSHAa2374 ribD; Riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PSHAb0325 putative outer membrane protein oprM precursor of a metabolite export system K18139 oprM; outer membrane protein, multidrug efflux system
D PSHAa3022 yidC; preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PSHAa2649 Serine protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D PSHAa0216 secE; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03073 secE; preprotein translocase subunit SecE
D PSHAa0874 secG; protein-export membrane protein secG(General Secretory Pathway) K03075 secG; preprotein translocase subunit SecG
D PSHAa2810 secY; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03076 secY; preprotein translocase subunit SecY
D PSHAa0320 yajC; putative preprotein translocase IISP family, membrane subunit K03210 yajC; preprotein translocase subunit YajC
D PSHAa2743 secA; preprotein translocase, ATPase secretion component (General Secretory Pathway) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PSHAa0354 ftsY; Cell division transporter substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PSHAa0369 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D PSHAa0942 ffh; 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pha02030]
D PSHAa0711 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2638 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2733 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa0848 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0121 putative Methyl-accepting or sensory transducer chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0277 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2387 putative chemotaxis sensory protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0518 putative Chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0184 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa0395 putative aerotaxis sensory transducer K03776 aer; aerotaxis receptor
D PSHAa0936 putative aerotaxis sensor receptor (Aer-like) K03776 aer; aerotaxis receptor
D PSHAa0812 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PSHAa0818 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PSHAa0817 conserved protein of unknown function; putative cheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D PSHAa0810 cheY; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAb0169 putative two domain protein: response regulator receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa0913 putative chemotaxis protein (cheY-like) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa1501 putative response regulator receiver in two-component signal transduction system K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa0811 cheZ; chemotaxis protein cheZ K03414 cheZ; chemotaxis protein CheZ
D PSHAa0492 conserved protein of unknown function; putative CheC-like protein K03409 cheX; chemotaxis protein CheX
D PSHAa0813 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PSHAa0766 cheV; chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PSHAa0767 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PSHAa0793 fliG; flagellar biosynthesis; component of motor switching and energizing K02410 fliG; flagellar motor switch protein FliG
D PSHAa0799 fliM; flagellar biosynthesis; component of motor switch and energizing K02416 fliM; flagellar motor switch protein FliM
D PSHAa0800 fliN; flagellar biosynthesis; component of motor switch and energizing K02417 fliN; flagellar motor switch protein FliN
D PSHAa0814 putative Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D PSHAa2363 motA; Flagellar motor component (Chemotaxis motA protein) K02556 motA; chemotaxis protein MotA
D PSHAa0815 motB; putative chemotaxis protein K02557 motB; chemotaxis protein MotB
D PSHAa2362 motB; sodium-driven polar flagellar protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pha02040]
D PSHAa0791 fliE; flagellar biosynthesis; basal-body component K02408 fliE; flagellar hook-basal body complex protein FliE
D PSHAa0792 fliF; flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D PSHAa0793 fliG; flagellar biosynthesis; component of motor switching and energizing K02410 fliG; flagellar motor switch protein FliG
D PSHAa0794 fliH; putative flagellar biosynthesis; export of flagellar proteins K02411 fliH; flagellar assembly protein FliH
D PSHAa0795 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PSHAa0796 fliJ; flagellar protein K02413 fliJ; flagellar protein FliJ
D PSHAa0797 fliK; putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PSHAa0798 fliL; putative flagellar protein K02415 fliL; flagellar protein FliL
D PSHAa2312 putative orphan protein K02415 fliL; flagellar protein FliL
D PSHAa0799 fliM; flagellar biosynthesis; component of motor switch and energizing K02416 fliM; flagellar motor switch protein FliM
D PSHAa0800 fliN; flagellar biosynthesis; component of motor switch and energizing K02417 fliN; flagellar motor switch protein FliN
D PSHAa0801 fliO; putative flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D PSHAa0802 fliP; flagellar biosynthesis K02419 fliP; flagellar biosynthesis protein FliP
D PSHAa0803 fliQ; flagellar biosynthesis K02420 fliQ; flagellar biosynthesis protein FliQ
D PSHAa0804 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR
D PSHAa0806 flhA; flagellar biosynthesis protein, putative export protein K02400 flhA; flagellar biosynthesis protein FlhA
D PSHAa0805 flhB; Flagellar biosynthetic protein flhB, putative part of export apparatus for flagellar proteins K02401 flhB; flagellar biosynthesis protein FlhB
D PSHAa0765 flgA; putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PSHAa0769 flgB; flagellar biosynthesis; cell-proximal portion of basal-body rod K02387 flgB; flagellar basal-body rod protein FlgB
D PSHAa0770 flgC; flagellar biosynthesis; cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D PSHAa0771 flgD; flagellar biosynthesis; initiation of hook assembly K02389 flgD; flagellar basal-body rod modification protein FlgD
D PSHAa0772 flgE; flagellar biosynthesis; hook protein K02390 flgE; flagellar hook protein FlgE
D PSHAa0773 flgF; flagellar biosynthesis; cell-proximal portion of basal-body rod K02391 flgF; flagellar basal-body rod protein FlgF
D PSHAa0774 flgG; flagellar biosynthesis; cell-distal portion of basal-body rod K02392 flgG; flagellar basal-body rod protein FlgG
D PSHAa0775 flgH; flagellar biosynthesis; basal-body outer-membrane L (lipopolysaccharide layer) ring protein K02393 flgH; flagellar L-ring protein FlgH
D PSHAa0776 flgI; flagellar P-ring protein precursor (Basal body P-ring protein) K02394 flgI; flagellar P-ring protein FlgI
D PSHAa0777 flgJ; putative flagellar biosynthesis K02395 flgJ; peptidoglycan hydrolase FlgJ
D PSHAa0778 flgK; putative flagellar hook-associated K02396 flgK; flagellar hook-associated protein 1
D PSHAa0779 flgL; putative flagellar synthesis; flagellar regulon; hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D PSHAa0762 conserved protein of unknown function K09860 flgP; outer membrane protein FlgP
D PSHAa0276 Sodium-type polar flagellar protein motX K21217 motX; sodium-type polar flagellar protein MotX
D PSHAa2115 motY; putative Component of sodium-driven polar flagellar motor K21218 motY; sodium-type flagellar protein MotY
D PSHAa0781 fliC; flagellin K02406 fliC; flagellin
D PSHAa0782 putative flagellin (fliC-like) K02406 fliC; flagellin
D PSHAa0784 fliD; putative flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D PSHAa0786 fliS; putative flagellar biosynthesis protein K02422 fliS; flagellar secretion chaperone FliS
D PSHAa0814 putative Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D PSHAa2363 motA; Flagellar motor component (Chemotaxis motA protein) K02556 motA; chemotaxis protein MotA
D PSHAa0815 motB; putative chemotaxis protein K02557 motB; chemotaxis protein MotB
D PSHAa2362 motB; sodium-driven polar flagellar protein K02557 motB; chemotaxis protein MotB
D PSHAa0764 flgM; putative negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D PSHAa0763 flgN; putative flagellar biosynthesis chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D PSHAa0349 rpoD; RNA polymerase sigma factor rpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor
D PSHAa0787 putative flagellar regulatory protein A (polar flagellae) K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PSHAa2551 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D PSHAa0790 flaM; putative Sigma-54 dependent response regulator; regulation of polar flagellae expression K10943 flrC; two-component system, response regulator FlrC
D PSHAa0809 fliA; Polar Flagellar-specific RNA polymerase sigma factor FliA (sigma F) K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PSHAa0742 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D PSHAa2222 putative B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (C terminal) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PSHAa2223 putativeB12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (N terminal) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pha01501]
D PSHAa2248 ampG; putative muropeptide transport protein (mFS family), highly conserved in gamma-proteobacteria K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PSHAb0065 nagZ; Beta-hexosaminidase A precursor (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) (Chitobiase) K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PSHAa0865 ampC; putative beta-lactamase precursor K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PSHAb0323 acrE; putative lipoprotein component of efflux protein (exporter) K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAa2272 conserved protein of unknown function; putative membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAb0324 acrB; putative multidrug efflux pump (RND family) K18138 acrB; multidrug efflux pump
D PSHAa2273 putative acrB/acrD/acrF acriflavin resistance family protein K18138 acrB; multidrug efflux pump
D PSHAb0325 putative outer membrane protein oprM precursor of a metabolite export system K18139 oprM; outer membrane protein, multidrug efflux system
D PSHAa2592 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D PSHAa2721 mrcA; Murein polymerase, bifunctional murein transglycosylase (N-terminal) and transpeptidase (C-terminal); penicillin-binding protein PBP1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PSHAa1025 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PSHAa2510 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pha01502]
D PSHAa2502 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PSHAa2434 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D PSHAa2508 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PSHAa2507 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PSHAa2504 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pha01503]
D PSHAa1282 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PSHAa1283 phoP; response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PSHAa2772 eptA; lipid A phosphoethanolamine transferase, associated with polymyxin resistance K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PSHAa2051 sapA; putative ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PSHAa2052 sapB; peptide transport protein (ABC superfamily, membrane) K19227 sapB; cationic peptide transport system permease protein
D PSHAa2053 sapC; peptide transport protein (ABC superfamily, membrane) K19228 sapC; cationic peptide transport system permease protein
D PSHAa2054 sapD; peptide transport protein (ABC superfamily, atp_bind) K19229 sapD; cationic peptide transport system ATP-binding protein
D PSHAa2055 sapF; peptide transport protein (ABC superfamily, atp_bind) K19230 sapF; cationic peptide transport system ATP-binding protein
D PSHAa0374 putative sensor histidine kinase protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PSHAa0375 cpxR; Transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PSHAa0268 amiB; N-acetylmuramoyl-l-alanine amidase II, murein hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PSHAa0248 dsbA; periplasmic protein, disulfide bond formation K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PSHAa0249 porA; periplasmic protein, disulfide bond formation K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PSHAa2247 putative Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSHAb0347 putative Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSHAb0323 acrE; putative lipoprotein component of efflux protein (exporter) K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAa2272 conserved protein of unknown function; putative membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAb0324 acrB; putative multidrug efflux pump (RND family) K18138 acrB; multidrug efflux pump
D PSHAa2273 putative acrB/acrD/acrF acriflavin resistance family protein K18138 acrB; multidrug efflux pump
D PSHAa2592 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D PSHAa2024 lpxA; Lipid A biosynthesis, UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pha01000]
C 01001 Protein kinases [BR:pha01001]
D PSHAb0252 putative kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PSHAa0453 conserved protein of unknown function; putative hipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PSHAa1780 putative Exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PSHAa0598 phoR; phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PSHAa1282 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PSHAa2849 envZ; sensory histidine kinase (phosphorylase) in two-component regulatory system with OmpR, regulates ompF and ompC expression, senses osmolarity (OmpR family) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PSHAa0374 putative sensor histidine kinase protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PSHAa2196 baeS; putative sensory transduction histidine kinase in two-component regulatory system with baeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PSHAb0013 cusS; sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PSHAb0161 putative sensory histidine kinase in two-component regulatory system K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PSHAa0550 arcB; aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PSHAa0627 putative sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PSHAa0854 rstB; sensory histidine kinase in two-component regulatory system with RstA K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PSHAa1592 uhpB; sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PSHAa0737 barA; sensor protein barA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PSHAa0556 putative sensory box histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PSHAa0922 algZ; putative alginate biosynthesis protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PSHAa1404 putative membrane protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PSHAa0164 glnL; nitrogen availability sensory kinase (soluble) in two-component regulatory system with GlnG, nitrogen regulation (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PSHAa0620 putative sensory histidine kinase in regulatory system K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PSHAb0361 putative two-component regulatory system sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PSHAa0812 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PSHAa0789 putative sensory box sensor histidine kinase in two-component regulatory system K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PSHAb0306 putative sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PSHAa0052 hypothetical tryptophan-rich sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PSHAb0275 putative signal transduction histidine kinase two-component system with Protein-glutamate methylesterase domain K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PSHAa1151 putative two-component member protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D PSHAa2394 putative two-component sensor histidine kinase and response regulator hybrid K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pha01009]
D PSHAa1207 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D PSHAa0661 serB; putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pha01002]
D PSHAa0919 lspA; lipoprotein signal peptidase (SPase II)(Prolipoprotein signal peptidase) K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PSHAa0380 pilD; Type 4 prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PSHAa1441 Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D PSHAa0649 guaA; GMP synthetase (glutamine aminotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PSHAa2070 purF; amidophosphoribosyltransferase (PRPP amidotransferase) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PSHAb0127 gltB; glutamate synthase, large subunit, GOGAT K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PSHAa2994 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PSHAa1440 asnB; asparagine synthetase B[glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PSHAa0631 putative transpeptidase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D PSHAa0639 conserved protein of unknown function K07052 K07052; CAAX protease family protein
D PSHAa2915 putative cold-active aminopeptidase; secreted using a signal peptide K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
D PSHAa1676 pepN; aminopeptidase N, a cysteinylglycinase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PSHAa0361 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PSHAa2184 dcp; Peptidyl-dipeptidase dcp (Dipeptidyl carboxypeptidase) K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PSHAa1371 putative peptidase M13 family protein K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PSHAa2745 Peptidase, M13 family (lipoprotein) K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PSHAb0349 putative TonB-dependent receptor protease/peptidase K01407 ptrA; protease III [EC:3.4.24.55]
D PSHAa0972 putative peptidase K01408 IDE; insulysin [EC:3.4.24.56]
D PSHAa1089 putative peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D PSHAa0643 conserved protein of unknown function K07263 pqqL; zinc protease [EC:3.4.24.-]
D PSHAb0302 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PSHAa2388 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PSHAa2423 pepA; cytosol aminopeptidase (Leucine aminopeptidase, Leucyl aminopeptidase) K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PSHAa1484 putative cytosol aminopeptidase 1 (EC 3.4.11.1) (Leucine aminopeptidase 1) (LAP 1) (Leucyl aminopeptidase 1) K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PSHAa0608 pepB; aminopeptidase B, a cysteinylglycinase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D PSHAa2910 putative periplasmic dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PSHAb0171 putative hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PSHAa1331 dapE; Succinyl-diaminopimelate desuccinylase (SDAP) K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PSHAa2204 putative hydrolase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PSHAa2037 map; methionine aminopeptidase; contains a divalent metal, usually cobalt K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PSHAb0215 putative metal-dependent dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PSHAa0013 pepQ; Xaa-Pro proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PSHAa0562 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PSHAa0870 ftsH; cell division protease ftsH, ATP-dependent zinc-metallo protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PSHAa1605 htpX; zinc metalloprotease HtpX, membrane-bound with cytosolic active site; heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PSHAa1134 putative prenylyltransferase domain and metalloproteases (zincins), catalytic domain K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PSHAa2029 ecfE; membrane-associated protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PSHAa1170 conserved protein of unknown function K09933 mtfA; MtfA peptidase
D PSHAa2536 degQ; periplasmic serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D PSHAa2537 degS; periplasmic serine endoprotease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D PSHAa2649 Serine protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D PSHAa1273 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PSHAb0005 Dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PSHAa2386 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PSHAa2955 ptrB; oligopeptidase, type B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PSHAa0069 ptrB; oligopeptidase (protease II) K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PSHAa1022 dacA; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PSHAa0522 conserved protein of unknown function; putative peptidase with beta-lactamase domain (partial match) K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D PSHAa2062 clpP; ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) (Caseinolytic protease) (Protease Ti)(Heat shock protein F21.5) K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PSHAa2060 lon; DNA-binding ATP-dependent protease La; heat shock K-protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PSHAa2873 lexA; transcriptional repressor for SOS response K01356 lexA; repressor LexA [EC:3.4.21.88]
D PSHAb0537 umuD; component of DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PSHAa1310 putative signal peptidase I family protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PSHAa0731 lepB; signal peptidase I (SPase I) (Leader peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PSHAa0364 putative carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PSHAa1678 prc; periplasmic carboxy-terminal protease with specificity for non-polar C-termini K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PSHAa1038 putative protease K08676 tri; tricorn protease [EC:3.4.21.-]
D PSHAa0079 putative hydrolase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PSHAa1409 sppA; protease IV, a signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D PSHAa1345 sohB; protease (may metabolize cleaved signal peptides) K04774 sohB; serine protease SohB [EC:3.4.21.-]
D PSHAa2313 putative GlpG protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D PSHAa1232 conserved protein of unknown function K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PSHAa2730 hslV; peptidase component of the HslUV protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PSHAa1143 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PSHAa1566 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PSHAb0145 yegQ; putative peptidase YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PSHAa2747 pmbA; putative enzyme for maturation of Microcin B17 and degradation of CcdA K03592 pmbA; PmbA protein
D PSHAa2675 tldD; putative suppressor of CsrA inhibitory activity; putative peptidase; involved in the control of DNA gyrase K03568 tldD; TldD protein
D PSHAa0274 hflC; HflC; HflKC is a membrane-associated complex K04087 hflC; modulator of FtsH protease HflC
D PSHAa0273 hflK; HflK complex with HflC K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pha01003]
D PSHAa2162 bcsA; Cellulose synthase catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D PSHAa2256 mrcB; Murein polymerase, bifunctional murein transglycosylase and transpeptidase; penicillin-binding protein PBP1B; dimeric K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PSHAa2721 mrcA; Murein polymerase, bifunctional murein transglycosylase (N-terminal) and transpeptidase (C-terminal); penicillin-binding protein PBP1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PSHAa0704 conserved protein of unknown function K21011 pelF; polysaccharide biosynthesis protein PelF
D PSHAa2938 mdoH; putative glucosyltransferase for synthesis of periplasmic glucans K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pha01005]
D PSHAa2024 lpxA; Lipid A biosynthesis, UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PSHAa2017 lpxB; tetraacyldisaccharide-1-P synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PSHAa2498 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (UDP-3-O-acyl-GlcNAc deacetylase) K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PSHAa2026 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PSHAa2067 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PSHAa1660 lpxK; tetraacyldisaccharide 4' kinase (lipid A 4'kinase) K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PSHAa2593 lpxL; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PSHAa2325 kdtA; putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PSHAa1128 conserved protein of unknown function K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PSHAb0144 conserved protein of unknown function; putative secreted protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PSHAa2772 eptA; lipid A phosphoethanolamine transferase, associated with polymyxin resistance K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PSHAa2319 putative lipopolysaccharide kinase family K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D PSHAa1063 kdsA; 3-deoxy-D-manno-octulosonic acid 8-P synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PSHAa1658 kdsB; CTP:CMP-3-deoxy-D-manno-octulosonate transferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PSHAa2547 kdsC; 3-Deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PSHAa2546 ksdD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PSHAa2318 putative ADP-heptose:LPS heptosyltransferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D PSHAa2324 putative phosphoheptose isomerase family K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PSHAa2317 gmhB; heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PSHAa2323 rfaE; bifunctional ADP-L-glycero-D-manno-heptose synthase: putaive kinase (N-terminal); putative sugar nucleotide transferase (C-terminal) K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pha01011]
D PSHAa2538 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PSHAa2914 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PSHAa2503 murC; UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PSHAa2506 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PSHAa2509 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PSHAa2502 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PSHAa2434 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D PSHAa0252 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PSHAa1232 conserved protein of unknown function K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PSHAa2507 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PSHAa2504 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PSHAb0269 Undecaprenyl-diphosphatase (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PSHAa2300 putative Undecaprenol kinase (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PSHAa0916 mviN; virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase
D PSHAa2721 mrcA; Murein polymerase, bifunctional murein transglycosylase (N-terminal) and transpeptidase (C-terminal); penicillin-binding protein PBP1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PSHAa2256 mrcB; Murein polymerase, bifunctional murein transglycosylase and transpeptidase; penicillin-binding protein PBP1B; dimeric K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PSHAa1025 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PSHAa2510 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PSHAa1022 dacA; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PSHAa0522 conserved protein of unknown function; putative peptidase with beta-lactamase domain (partial match) K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D PSHAa0631 putative transpeptidase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D PSHAa0012 slt; secreted lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PSHAb0509 putative periplasmic lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PSHAb0242 putative transglycosylase K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D PSHAa1967 mltD; lytic murein transglycosylase C, membrane-bound K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PSHAa0293 mltD; putative membrane-bound lytic murein transglycosylase D [Precursor] K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PSHAa2331 putative transport binding protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D PSHAa1804 conserved protein of unknown function; putative signal peptide K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PSHAa1023 putative Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PSHAa2023 conserved protein of unknown function; putative rlpA-like lipoprotein precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PSHAa0268 amiB; N-acetylmuramoyl-l-alanine amidase II, murein hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PSHAa0388 ampD; N-acetyl-anhydromuramyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pha01004]
D PSHAa1809 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PSHAb0304 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III protein 2 (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III 2) (KAS III 2) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PSHAa1382 putative beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D PSHAa2080 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PSHAb0407 putative 3-oxoacyl-(Acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PSHAa1806 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PSHAb0410 putative 3-oxoacyl-[acyl-carrier-protein] synthase II (fabF-like) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PSHAa2151 putative reductase or dehydrogenase protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAb0409 putative 3-oxoacyl-[acyl-carrier-protein] reductase (fabG-like) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa0894 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1808 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1460 putative 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PSHAa1491 fabA; beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isomerase) K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PSHAa2025 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PSHAa2242 putative short-chain alcohol dehydrogenase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PSHAa1880 apeA; multifunctional: Acyl-CoA thioesterase I precursor (Protease I) (Lysophospholipase L1) (Lecithinase B) K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PSHAa0141 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PSHAa2897 putative long chain acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PSHAa1269 putative fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D PSHAa0698 acs; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PSHAa2444 prpE; Propionyl CoA synthase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PSHAb0502 fadD; acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSHAa0896 putative very-long-chain acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PSHAa1394 putative long-chain-fatty-acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PSHAa0142 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PSHAa1810 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PSHAa2303 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PSHAa2584 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pha01008]
D PSHAa0080 putative secreted hydrolase K05555 actIV; cyclase [EC:4.-.-.-]
C 01006 Prenyltransferases [BR:pha01006]
D PSHAa2365 ispA; geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PSHAa2657 ispB; Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PSHAa2032 ispU; undecaprenyl pyrophosphate synthetase (UPP synthetase) (Di-trans-poly-cis-decaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PSHAa0270 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PSHAa2310 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PSHAa2227 cyoE; protoheme IX farnesyltransferase (Heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
D PSHAa2865 Polyprenyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pha01007]
D PSHAa0635 gltX; Glutamyl-tRNA synthetase (Glutamate-tRNA ligase) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PSHAa1642 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PSHAa0605 queB; putative glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PSHAa2413 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSHAa0545 tyrZ; Tyrosyl-tRNA synthetase II K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSHAa2708 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PSHAa2065 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PSHAa0656 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PSHAa1317 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PSHAa0918 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PSHAa2425 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PSHAa1031 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PSHAa0518 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PSHAa1938 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PSHAa1616 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PSHAb0137 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PSHAa0005 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PSHAa0006 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PSHAa1712 serS; serine tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PSHAa1623 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PSHAa1396 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PSHAa0532 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PSHAa1904 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PSHAa1903 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PSHAa0956 aspC; aspartate aminotransferase (Transaminase A) (ASPAT) K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PSHAa1703 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PSHAa1323 yfbQ; putative PLP-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PSHAb0492 hisC; histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PSHAa2316 kbl; 2-amino-3-ketobutyrate CoA ligase (AKB ligase, glycine acetyltransferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PSHAa1608 bioF; 8-amino-7-oxononanoate synthase (7-keto-8-aminopelargonic acid synthetase) K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PSHAa0194 astC; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PSHAb0428 putative acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PSHAa1610 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase (7,8-diaminopelargonic acid synthetase), PLP-dependent K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PSHAa2255 hemL; Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PSHAa1270 ilvE; putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PSHAa1422 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pha00194]
D PSHAa3007 atpC; membrane-bound ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PSHAa3008 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PSHAa3009 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PSHAa3010 atpA; membrane-bound ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PSHAa3011 atpH; membrane-bound ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PSHAa3012 atpF; membrane-bound ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PSHAa3013 atpE; membrane-bound ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PSHAa3014 atpB; membrane-bound ATP synthase, F0 sector, subunit a, important for F0 assembly K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PSHAa3015 atpI; membrane-bound ATP synthase subunit, F1-F0-type proton-ATPase K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pha03000]
D PSHAa2408 putative transcriptional regulator (AraC/XylS family) K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D PSHAb0291 putative ADA regulatory protein (Regulatory protein of adaptative response) K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PSHAa1064 gcvA; transcriptional regulator (postitive) of cleavage of glycine (LysR family) K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PSHAa1445 putative transcriptional regulator (positive) of LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PSHAb0213 putative transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PSHAa0850 putative transcriptional activator IlvY (LysR family) K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D PSHAa1181 metR; Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PSHAa1468 putative transcriptional activator protein, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PSHAa0760 oxyR; putative hydrogen peroxide-inducible genes activator similar to OxyR (but also to other LysR like activators) K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PSHAa0315 putative transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PSHAa1162 cysB; Cys regulon transcriptional activator (LysR family) K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D PSHAa2189 putative Transcriptional regulator, LysR family K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D PSHAa1261 putative transcriptional regulator of the LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D PSHAa2568 hdfR; putative transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D PSHAb0550 glpR; transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate (DeoR family) K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PSHAa1365 putative transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PSHAa1771 putative GalR repressor of contiguous operon, likely to bind a galactoside K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PSHAb0478 gntR; putative transcriptional repressor for gluconate/idonate utilization (GalR/LacI familiy) K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D PSHAa2738 hutC; Histidine utilization repressor (GntR family) K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PSHAa0838 fadR; fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D PSHAa0390 pdhR; transcriptional repressor for pyruvate dehydrogenase complex (GntR family) K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PSHAa1739 putative regulatory protein, GntR family K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D PSHAb0152 nanR; transcriptional repressor of aminosugar metabolism (GntR family) K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D PSHAb0420 betI; putative transcriptional repressor for the cellular response to osmotic stress (TetR/AcrR family) K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D PSHAa2645 ttk; putative transcriptional regulator of dUTPase (TetR/AcrR family) K05501 slmA; TetR/AcrR family transcriptional regulator
D PSHAa1489 putative transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PSHAb0185 putative transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PSHAa0651 putative transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor
D PSHAa2896 fabR; transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D PSHAa2797 asnC; transcriptional regulator of asparagine biosynthesis (AsnC family) K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PSHAa2263 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PSHAa1717 lrp; transcriptional regulator of lrp regulon and for high-affinity branched-chain amino acid transport system (AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PSHAa0053 putative transcriptional regulator (LRP/AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PSHAa1402 putative transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PSHAa2120 putative transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D PSHAa2918 putative transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D PSHAb0035 putative transcriptional regulator (MarR family) K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PSHAb0179 ohrR; putative OhrR transcriptional regulator, MarR/EmrR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PSHAa1010 putative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family) K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D PSHAa1641 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PSHAa0493 zur; Zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PSHAa0162 conserved protein of unknown function K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PSHAa1850 fnr; transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family) K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PSHAa2672 iscR; transcriptional repressor of the iscRSUA operon, involved in assembly of Fe-S clusters K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PSHAa2419 conserved protein of unknown function K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PSHAb0181 putative arsenic resistance operon regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PSHAa2834 Transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D PSHAa2913 birA; biotin-[protein] holoenzyme synthetase; possibly (by homology) transcriptional repressor of biotin synthesis (BirA family) K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PSHAa0346 fis; DNA-binding protein for site-specific recombination and inversion, transcription of rRNA and tRNA operons, and DNA replication K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PSHAa0434 putative orphan protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PSHAa0787 putative flagellar regulatory protein A (polar flagellae) K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PSHAa2883 norR; transcriptional regulator of anaerobic NO reduction and detoxification (EBP family) K12266 norR; anaerobic nitric oxide reductase transcription regulator
D PSHAa1893 putative Sigma-54 dependent transcriptional regulator/sensory box protein K15836 fhlA; formate hydrogenlyase transcriptional activator
D PSHAa2724 metJ; transcriptional repressor for methionine biosynthesis (MetJ family) K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D PSHAa2264 putA; bifunctional putA protein: Proline dehydrogenase (Proline oxidase) and Delta-1-pyrroline-5-carboxylate dehydrogenase(P5C dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PSHAa2243 bolA; regulator protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PSHAa3016 parB; ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PSHAb0002 putative transcriptional regulator for chromosome partitioning (parB family protein) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PSHAa2639 putative Transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D PSHAa2659 argR; transcriptional repressor of arginine synthesis (ArgR familiy) K03402 argR; transcriptional regulator of arginine metabolism
D PSHAa1221 conserved protein of unknown function K03705 hrcA; heat-inducible transcriptional repressor
D PSHAa2157 tyrR; Transcriptional regulatory protein tyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PSHAa1123 gcvR; transcriptional repressor for cleavage of glycine K03567 gcvR; glycine cleavage system transcriptional repressor
D PSHAa2050 pspF; transcriptional activator of phage shock proteins (EBP family) K03974 pspF; psp operon transcriptional activator
D PSHAa0501 pspC; putative phage shock protein C K03973 pspC; phage shock protein C
D PSHAa2047 pspC; transcriptional activator of the psp operon with PspB, phage shock protein K03973 pspC; phage shock protein C
D PSHAa0258 rnk; putative regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D PSHAa2600 yqgE; conserved protein possibly involved in the control of exopolysaccharide production K07735 algH; putative transcriptional regulator
D PSHAa0606 dksAA; RNA polymerase factor controlling rRNA transcription with ppGpp as a modulator; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PSHAa1194 dksAB; putative DksA-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PSHAa2375 ribX; putative predicted transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D PSHAa2513 mraZ; conserved protein of unknown function K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pha03021]
D PSHAa2806 rpoA; DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PSHAa0222 rpoB; DNA-directed RNA polymerase beta chain (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PSHAa0223 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PSHAa2791 rpoZ; DNA-directed RNA polymerase omega chain (EC 2.7. 7.6) (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PSHAa0349 rpoD; RNA polymerase sigma factor rpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor
D PSHAa0691 rpoS; sigma S (sigma 38) factor of RNA polymerase, major sigma factor during stationary phase K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D PSHAa0726 rpoE; sigma E (sigma 24) factor of RNA polymerase, response to periplasmic stress (TetR/ArcR family) (partial match) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PSHAa0357 rpoH; RNA polymerase sigma-32 factor (Heat shock regulatory protein F33.4) K03089 rpoH; RNA polymerase sigma-32 factor
D PSHAa2551 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D PSHAa0809 fliA; Polar Flagellar-specific RNA polymerase sigma factor FliA (sigma F) K02405 fliA; RNA polymerase sigma factor FliA
D PSHAa2624 hepA; RNA polymerase associated protein (ATP-dependent helicase HepA) K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D PSHAa0996 nusA; transcription elongation protein (N utilization substance protein A) (L factor) K02600 nusA; transcription termination/antitermination protein NusA
D PSHAa2370 nusB; transcription termination factor K03625 nusB; transcription antitermination protein NusB
D PSHAa0217 nusG; component in transcription antitermination; couples translation and transcription K02601 nusG; transcription termination/antitermination protein NusG
D PSHAa2527 sspA; stringent starvation protein A, regulator of transcription K03599 sspA; stringent starvation protein A
D PSHAa2526 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D PSHAa0727 rseA; putative anti sigma E (sigma 24) factor, negative regulator K03597 rseA; sigma-E factor negative regulatory protein RseA
D PSHAa0728 rseB; putative anti sigma E (sigma 24) factor, negative regulator K03598 rseB; sigma-E factor negative regulatory protein RseB
D PSHAa0729 rseC; putative regulator of sigma E (sigma 24) factor K03803 rseC; sigma-E factor negative regulatory protein RseC
D PSHAa0606 dksAA; RNA polymerase factor controlling rRNA transcription with ppGpp as a modulator; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PSHAa1194 dksAB; putative DksA-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PSHAa1230 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D PSHAa2851 greB; transcription elongation factor and transcript cleavage K04760 greB; transcription elongation factor GreB
D PSHAa0112 rho; transcription termination factor Rho; polarity suppressor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pha03019]
D PSHAa1816 rne; RNase E: endoribonuclease for rRNA processing and mRNA degradation; member of the degradosome; involved in the production of deoxyribonucleotides via the formation of NDPs K08300 rne; ribonuclease E [EC:3.1.26.12]
D PSHAa2678 rng; RNase G (ribonuclease G) K08301 rng; ribonuclease G [EC:3.1.26.-]
D PSHAa0732 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PSHAa2480 rnr; RNase R, 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PSHAa2981 cold-shock RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PSHAa0488 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PSHAa0114 rhlB; ATP-dependent RNA helicase with nucleoside triP hydrolase domain, putative cold-shock protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PSHAa1930 rhlE; putative ATP-dependent RNA helicase with P-loop hydrolase domain K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PSHAa0641 putative ATP-dependent RNA helicase(rhlE-like); DEAD-box protein family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PSHAb0411 rhlE; putative ATP-dependent RNA helicase with P-loop hydrolase domain; DEAD-box protein family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PSHAa2983 rhlE; DEAD-box protein family; putative ATP-dependent RNA helicase with P-loop hydrolase domain K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PSHAa0990 deaD; ATP-dependent RNA helicase, cold shock protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PSHAa2572 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PSHAb0119 putative helicase (recQ-like) K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PSHAa0742 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSHAa1001 pnp; polynucleotide phosphorylase, has polyadenylase activity; part of the degradosome K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PSHAa0112 rho; transcription termination factor Rho; polarity suppressor K03628 rho; transcription termination factor Rho
D PSHAb0357 dnaK; Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D PSHAa0259 groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSHAa0271 hfq; Host factor-I; polyA binding protein K03666 hfq; host factor-I protein
D PSHAa0604 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PSHAa0745 nudH; (Di)nucleoside polyphosphate hydrolase (Ap5A pyrophosphatase) K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PSHAa0534 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D PSHAa2701 protein with EAL domain K18765 csrD; RNase E specificity factor CsrD
D PSHAa2734 rraA; regulator of RNase E/rne (Belongs to the rraA family) K02553 rraA; regulator of ribonuclease activity A
D PSHAb0201 rraB; putative regulator of ribonuclease E activity (Rra family) K02553 rraA; regulator of ribonuclease activity A
D PSHAa2583 conserved protein of unknown function K09893 rraB; regulator of ribonuclease activity B
D PSHAa2554 conserved protein of unknown function K06958 rapZ; RNase adapter protein RapZ
D PSHAa1144 hrpA; helicase, ATP-dependent K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PSHAa2216 hrpB; ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pha03011]
D PSHAa1425 rpsA; 30S ribosomal subunit protein S1; site specific RNA helicase; component of the degradosome K02945 RP-S1; small subunit ribosomal protein S1
D PSHAa2036 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PSHAa0150 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PSHAa2807 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PSHAa2813 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PSHAa2443 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PSHAa0225 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PSHAa2816 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PSHAa2531 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PSHAa0143 rpsJ; 30S ribosomal subunit protein S10 (NusE protein) K02946 RP-S10; small subunit ribosomal protein S10
D PSHAa2808 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PSHAa0224 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PSHAa2809 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PSHAa2817 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PSHAa1000 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PSHAa0944 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PSHAa0153 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PSHAa2440 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PSHAa0148 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PSHAa0914 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PSHAa0352 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PSHAa0219 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PSHAa0147 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PSHAa0144 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PSHAa0145 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PSHAa2818 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PSHAa2815 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PSHAa2439 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PSHAa0220 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PSHAa0218 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PSHAa0221 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PSHAa2532 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PSHAa2820 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PSHAa2811 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PSHAa0151 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PSHAa2805 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PSHAa2814 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PSHAa0947 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PSHAa1399 rplT; 50S ribosomal subunit protein L20, also posttranslational autoregulator K02887 RP-L20; large subunit ribosomal protein L20
D PSHAa2656 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PSHAa0149 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PSHAa0146 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PSHAa2819 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PSHAa2655 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PSHAa2642 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PSHAa0152 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PSHAa2812 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PSHAa2726 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PSHAa1811 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PSHAa2641 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PSHAa3026 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PSHAa1398 rpmI; 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D PSHAb0382 rpmJ; 50S ribosomal protein L36 (Ribosomal protein B) K02919 RP-L36; large subunit ribosomal protein L36
D PSHAa1053 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PSHAa_rRNA5s5 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s3 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s9 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s10 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s7 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s2 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s4 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s8 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s1 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s6 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA16s6 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s7 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s1 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s3 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s4 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s5 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s9 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s8 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s2 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA23s9 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s8 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s5 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s3 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s4 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s2 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s6 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s1 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s7 23s K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pha03009]
D PSHAa0732 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PSHAb0252 putative kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PSHAa0488 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PSHAa0733 era; GTP-binding protein era K03595 era; GTPase
D PSHAa2654 cgtA; GTPase (Obg family) involved in ribosome maturation; multicopy suppresssor of ftsJ (rrmJ); associated to the ribosome; may bind ppGpp K03979 obgE; GTPase [EC:3.6.5.-]
D PSHAa0606 dksAA; RNA polymerase factor controlling rRNA transcription with ppGpp as a modulator; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PSHAa1194 dksAB; putative DksA-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PSHAa0996 nusA; transcription elongation protein (N utilization substance protein A) (L factor) K02600 nusA; transcription termination/antitermination protein NusA
D PSHAa2370 nusB; transcription termination factor K03625 nusB; transcription antitermination protein NusB
D PSHAa0217 nusG; component in transcription antitermination; couples translation and transcription K02601 nusG; transcription termination/antitermination protein NusG
D PSHAa0467 rsuA; 16S rRNA pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PSHAa0085 putative ribosomal RNA pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PSHAa2635 ksgA; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase, Kasugamycin dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PSHAa0021 rsmB; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PSHAa0552 rsmC; putative ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PSHAa0353 putative enzyme with N-6 Adenine-specific DNA methylase domain K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PSHAa2598 putative RNA methyltransferase with a deep trefoil knot, RrmA and YibK are structural paralogs K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PSHAa1777 conserved protein of unknown function; putative bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D PSHAa3018 gidB; putative S-adenosyl-L-methionine-dependent methyltransferase domain, could be a tRNA or lipid methylase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PSHAa2512 mraW; S-adenosyl-dependent methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PSHAa2521 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PSHAa0362 conserved protein of unknown function K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PSHAa1337 putative 23S rRNA m1G745 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PSHAa2479 rlmB; Gm2251 methyltransferase of 23S rRNA K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PSHAa0869 ftsJ; ribosomal RNA large subunit methyltransferase J (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) (Cell division protein ftsJ) K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PSHAb0296 putative S-adenosyl-L-methionine-dependent methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D PSHAa2245 rsmD; Putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966 methyltransferase) K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D PSHAa1026 conserved protein of unknown function K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PSHAa1111 conserved protein of unknown function K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PSHAa1147 yccW; putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase activity and a PUA domain. K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PSHAa0298 conserved protein of unknown function; putative K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PSHAa1667 putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D PSHAa1067 ygdE; RNA 2'-O-ribose methyltransferase, SAM-dependent domain K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D PSHAb0141 putative pyruvate formate lyase activating enzyme 2; Fe-S cluster domain K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PSHAa0738 rumA; 23S rRNA (uracil-5)-methyltransferase, responsible for modification at position U1939, SAM-dependent K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PSHAa1206 putative 23S rRNA pseudouridylate 746 synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSHAa1238 ribosomal large subunit pseudouridine synthase A (Pseudouridylate synthase, 23S RNA-specific) K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSHAa2627 rluA; pseudouridylate synthase for 23S rRNA (position 746) and tRNAphe(position 32), dual specificity K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSHAa1657 conserved protein of unknown function; putative 23S rRNA pseudouridylate synthase. In E.coli Pseudouridine synthases are responsible for synthesis of pseudouridine from uracil in 23S rRNA. K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSHAa1342 rluB; pseudouridine synthase (makes pseudouridine2605 in 23 S RNA) K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PSHAa1815 rluC; 23S rRNA pseudouridylate synthase, in E. coli modifies positions 955, 2504, and 2580 in 23 S ribosomal RNA K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PSHAa0933 rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PSHAa1688 rluE; ribosomal large subunit pseudouridine synthase E (Pseudouridylate synthase) (Uracil hydrolyase) K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PSHAb0436 rluC; putative ribosomal RNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PSHAa0653 rimI; ribosomal-protein-alanine acetyltransferase (Acetylating enzyme for N-terminal of ribosomal protein S18) K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PSHAa2577 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D PSHAa0945 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D PSHAa0078 conserved protein of unknown function K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D PSHAa0348 prmA; methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PSHAa0982 prmB; putative 50S subunit L3 protein glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D PSHAa1693 putative enzyme with RmlC-like domain K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PSHAa1816 rne; RNase E: endoribonuclease for rRNA processing and mRNA degradation; member of the degradosome; involved in the production of deoxyribonucleotides via the formation of NDPs K08300 rne; ribonuclease E [EC:3.1.26.12]
D PSHAa2678 rng; RNase G (ribonuclease G) K08301 rng; ribonuclease G [EC:3.1.26.-]
D PSHAa2601 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PSHAa0109 dbpA; putative ATP-dependent RNA helicase; putative cold-shock protein; could be specific for rRNA folding K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D PSHAa0990 deaD; ATP-dependent RNA helicase, cold shock protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PSHAa0510 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D PSHAa0487 putative GTPase engC precursor K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PSHAb0134 der; GTP-binding protein, essential for cell growth in E. coli and B. subtilis, regulates ribosome synthesis K03977 engA; GTPase
D PSHAa2950 putative tRNA modification protein K14540 rbgA; ribosome biogenesis GTPase A
D PSHAa0272 hflX; HflX, putative GTPase subunit of protease with nucleoside triP hydrolase domain K03665 hflX; GTPase
D PSHAa1393 putative GTP binding protein K03665 hflX; GTPase
D PSHAa0028 putative double-stranded RNA-binding protein with unique protein fold, with YrdC/RibB domain K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PSHAa2793 spoT; bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PSHAa0998 rbfA; ribosome-binding factor A, role in processing of 16S rRNA K02834 rbfA; ribosome-binding factor A
D PSHAa0995 conserved protein of unknown function (yhbC) K09748 rimP; ribosome maturation factor RimP
D PSHAa0161 conserved protein of unknown function, similar to putative regulator YbcJ from E. coli K12, could bind nucleic acids K14761 rlbA; ribosome-associated protein
D PSHAa1027 conserved protein of unknown function K09710 ybeB; ribosome-associated protein
D PSHAa1044 conserved protein of unknown function K07042 ybeY; probable rRNA maturation factor
D PSHAa0868 yhbY; RNA binding protein; ancient RNA-binding IF3-C fold K07574 yhbY; RNA-binding protein
D PSHAa2748 putative transport protein (ABC superfamily, ATP-binding) K09889 yjgA; ribosome-associated protein
D PSHAa1490 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D PSHAa2552 putative protein Y involved in control of translation at low temperature K05808 hpf; ribosome hibernation promoting factor
D PSHAa0673 putative ribosomal subunit interface protein, similar to protein Y K05809 raiA; ribosome-associated inhibitor A
D PSHAa1051 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
D PSHAa1812 conserved protein of unknown function K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pha03016]
D PSHAa0625 cca; tRNA nucleotidyl transferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PSHAa0635 gltX; Glutamyl-tRNA synthetase (Glutamate-tRNA ligase) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PSHAa1623 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PSHAa0918 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PSHAa1031 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PSHAa1317 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PSHAa1642 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PSHAa0656 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PSHAa0518 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PSHAa1938 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PSHAa0532 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PSHAa1616 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PSHAa1396 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PSHAa1712 serS; serine tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PSHAa2065 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PSHAa2425 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PSHAb0137 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PSHAa1904 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PSHAa1903 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PSHAa2413 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSHAa0545 tyrZ; Tyrosyl-tRNA synthetase II K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSHAa2708 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PSHAa0172 dtd; D-Tyr-tRNA(Tyr) deacylase; removes other D-aminoacids from mischarged tRNA K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PSHAa2917 hit; member of HIT (histidine triad) family that contains Ap3A and Ap4A hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PSHAa0553 yggH; tRNA (m7G46) methyltransferase, SAM-dependent K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PSHAa1622 conserved protein of unknown function K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PSHAa2075 truA; tRNA pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PSHAa0999 truB; tRNA pseudouridine 5S synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PSHAa0686 truD; tRNA pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase) K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PSHAb0099 iscS; Cysteine desulfurase (ThiI) (transpersulfidase) (NifS protein homolog) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa2671 iscS; cysteine desulfurase (tRNA sulfurtransferase; RNA 4-thiouridine sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa1138 putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa0028 putative double-stranded RNA-binding protein with unique protein fold, with YrdC/RibB domain K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PSHAa0270 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PSHAa3021 mnmE; enzyme adding cmnm(5) to tRNA-s(2)U34, forming (with subsequent MnmG action) cmnm(5)s(2)U34-tRNA, an intermediate in mnm(5)s(2)U34-tRNA synthesis K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PSHAa3019 mnmG; tRNA modification, oxidoreductase-like with FAD/NAD(P)-binding domain K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PSHAa0208 cysQ; likely to be PAP (3',5' adenosine diphosphate) 3' phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PSHAa0128 carbohydrate phosphatase; putative CysQ protein duplicate K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PSHAa3025 rnpA; Ribonuclease P protein component (RNaseP protein) (RNase P protein) (Protein C5) K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PSHAa2114 rnt; RNase T, degrades tRNA, has exonuclease and ssDNAse activity K03683 rnt; ribonuclease T [EC:3.1.13.-]
D PSHAa2788 rph; RNase PH (tRNA nucleotidyltransferase) K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PSHAb0503 rnd; putative RNase D, processing tRNA precursors K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PSHAa2225 putative ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D PSHAa0005 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PSHAa0006 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PSHAa0605 queB; putative glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PSHAb0359 ybaK; putative ala-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PSHAa0282 conserved protein of unknown function K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PSHAa2333 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PSHAa0499 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PSHAa0347 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PSHAa1195 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PSHAa1046 miaB; involved in methylthiolation of isopentenylated A37 derivatives in tRNA, Fe-S protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PSHAa1945 putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PSHAb0053 putative orphan protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PSHAa1946 yecP; putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D PSHAa0250 trmA; tRNA (Uracil-5-)-methyltransferase (tRNA(M-5-U54)-methyltransferase) (RUMT) K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PSHAa0946 trmD; tRNA (guanine-7-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PSHAa2798 trmH; putative tRNA methyltransferase (tRNA mG18-2'-O-methyltransferase) K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D PSHAa2673 putative tRNA/rRNA methyltransferase (trmH family) K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D PSHAa0371 putative tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PSHAa0511 conserved protein of unknown function; putative SAM-dependent methyltransferase(yfiC) K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D PSHAa1080 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D PSHAa1970 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D PSHAa1206 putative 23S rRNA pseudouridylate 746 synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSHAa1238 ribosomal large subunit pseudouridine synthase A (Pseudouridylate synthase, 23S RNA-specific) K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSHAa2627 rluA; pseudouridylate synthase for 23S rRNA (position 746) and tRNAphe(position 32), dual specificity K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSHAa1657 conserved protein of unknown function; putative 23S rRNA pseudouridylate synthase. In E.coli Pseudouridine synthases are responsible for synthesis of pseudouridine from uracil in 23S rRNA. K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSHAa1690 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PSHAa1852 conserved protein of unknown function, contains adenine nucleotide alpha hydrolase domain K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PSHAa0009 sirA; small ubiquitous RNA-binding protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PSHAa1686 conserved protein of unknown function K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PSHAa1685 conserved protein of unknown function K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PSHAa1684 conserved protein of unknown function K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PSHAa1687 conserved protein of unknown function; putative anaerobic sulfite reductase gamma subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PSHAa2669 iscA; Fe-S cluster assembly and activation protein (possibly as alternative scaffold for Fe-S cluster assembly) K13628 iscA; iron-sulfur cluster assembly protein
D PSHAa0722 ygfZ; putative one-carbon metabolism transcriptional regulator, COG 354, highly conserved in phylogeny K06980 ygfZ; tRNA-modifying protein YgfZ
D PSHAa2068 TRNA-(MS[2]IO[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D PSHAa1560 conserved protein of unknown function K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D PSHAa2081 conserved protein of unknown function, FAD/NAD(P)-binding domain K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D PSHAa0318 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein) K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PSHAa1116 putative regulator protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PSHAa1117 queC; queC protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PSHAa1980 queD; putative queD protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PSHAa2485 conserved protein of unknown function; putative 4Fe-4S ferredoxin-type domain K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PSHAa0319 tgt; Queuine tRNA-ribosyltransferase(tRNA-guanine transglycosylase)(Guanine insertion enzyme) K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PSHAa2280 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PSHAa2013 tilS; putative lysidine forming enzyme, modifying isoleucine tRNA decoding AUA K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PSHAa0121 conserved protein of unknown function; putative acetyltransferase domain K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D PSHAb0498 putative protease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PSHAa2304 gcp; Gcp glycoprotease homolog K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PSHAa0267 conserved protein of unknown function K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PSHAa1656 putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PSHAa2480 rnr; RNase R, 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PSHAa2981 cold-shock RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PSHAa1001 pnp; polynucleotide phosphorylase, has polyadenylase activity; part of the degradosome K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pha03012]
D PSHAa0952 conserved protein of unknown function; putative translation initiation factor SUI1 family K03113 EIF1; translation initiation factor 1
D PSHAa0997 infB; protein chain initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PSHAa1397 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PSHAa2905 putative ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PSHAa2035 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D PSHAa2911 tufB; protein chain elongation factor EF-Tu; possible GTP-binding factor (duplicate of tufA) K02358 tuf; elongation factor Tu
D PSHAa0227 tufA; protein chain elongation factor EF-Tu; GTP-binding factor K02358 tuf; elongation factor Tu
D PSHAa0226 fusA; protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D PSHAa2940 putative second protein chain elongation factor EF-G, GTP-binding, may be involved in incorporation of non-canonic amino acid K02355 fusA; elongation factor G
D PSHAa1058 prfA; Peptide chain release factor 1 (RF-1) K02835 prfA; peptide chain release factor 1
D PSHAa2033 frr; ribosome releasing factor K02838 frr; ribosome recycling factor
D PSHAa1059 prmC; N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PSHAa1052 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PSHAa1723 infA; protein chain initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PSHAa0969 putative elongation factor P-like protein K02356 efp; elongation factor P
D PSHAa0474 efp; elongation factor P (EF-P) K02356 efp; elongation factor P
D PSHAa0475 putative fold recognizing lysyl-tRNA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D PSHAa0473 kamA; putative lysine 2,3 aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D PSHAa0986 conserved protein of unknown function K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D PSHAa0517 prfB; peptide chain release factor 2 (RF-2) K02836 prfB; peptide chain release factor 2
D PSHAa0655 prfC; peptide chain release factor RF-3; GTP-binding factor K02837 prfC; peptide chain release factor 3
D PSHAb0114 conserved protein of unknown function K09890 arfA; alternative ribosome-rescue factor
D PSHAb0038 putative protein with Class I peptide chain release factor domain and peptidyl-tRNA hydrolase domain K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pha03110]
D PSHAa1724 clpA; ATP-dependent specificity subunit of clpA-clpP serine protease K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PSHAa0935 clpB; ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PSHAa2061 clpX; ATPase, chaperone subunit of serine protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PSHAa2731 hslU; ATPase component of the HslUV protease, also functions as molecular chaperone K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PSHAa1207 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D PSHAb0357 dnaK; Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D PSHAa2667 hscA; chaperone (Hsp70 family), involved in assembly of Fe-S clusters (involved in the maturation of iscU) K04044 hscA; molecular chaperone HscA
D PSHAa2176 putative heat shock protein (Hsp70 family), actin-like ATPase domain K04046 yegD; hypothetical chaperone protein
D PSHAa0259 groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSHAb0358 dnaJ; Chaperone protein dnaJ (Heat shock protein J) (HSP40), co-chaperone with DnaK K03686 dnaJ; molecular chaperone DnaJ
D PSHAa2878 cbpA; curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family) K05516 cbpA; curved DNA-binding protein
D PSHAa2629 djlA; DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D PSHAa2668 hscB; co-chaperone protein Hsc20, involved in assembly of Fe-S clusters (specific for IscU) K04082 hscB; molecular chaperone HscB
D PSHAa0229 hslO; heat shock protein 33, redox regulated chaperone K04083 hslO; molecular chaperone Hsp33
D PSHAa1222 grpE; Hsp 24 DnaK nucleotide exchange factor; probable member of the DnaK/DnaJ/GrpE foldase complex K03687 GRPE; molecular chaperone GrpE
D PSHAa0992 ibpB; small heat shock protein K04080 ibpA; molecular chaperone IbpA
D PSHAa0993 ibpA; small heat shock protein K04080 ibpA; molecular chaperone IbpA
D PSHAa0230 hslR; heat shock protein 15, DNA/RNA-binding K04762 hslR; ribosome-associated heat shock protein Hsp15
D PSHAa0260 groS; 10 kDa chaperonin (Protein Cpn10) (groES protein) K04078 groES; chaperonin GroES
D PSHAa0870 ftsH; cell division protease ftsH, ATP-dependent zinc-metallo protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PSHAa3014 atpB; membrane-bound ATP synthase, F0 sector, subunit a, important for F0 assembly K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PSHAa2124 putative orphan protein K07346 fimC; fimbrial chaperone protein
D PSHAa0369 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D PSHAa0376 conserved protein of unknown function; putative CpxP (P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated) domain K06006 cpxP; periplasmic protein CpxP/Spy
D PSHAa0503 conserved protein of unknown function K09796 pccA; periplasmic copper chaperone A
D PSHAa2649 Serine protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D PSHAa2247 putative Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSHAb0347 putative Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSHAa2066 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PSHAa2058 ppiD; peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PSHAa2901 fkpA; putative periplasmic peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PSHAa1414 fklB; FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PSHAa0920 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D PSHAa0721 slyDA; FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PSHAa0292 slyDB; peptidyl-prolyl cis-trans isomerase, FkbP family K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PSHAa2488 ppiC; peptidyl-prolyl cis-trans isomerase C (rotamase C) K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PSHAb0308 ppiCB; peptidyl-prolyl cis-trans isomerase C (rotamase C) K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PSHAa2633 surA; peptidyl-prolyl cis-trans isomerase (PPIase) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PSHAa0113 trxA; thioredoxin 1, redox factor K03671 TXN; thioredoxin
D PSHAa2342 putative thioredoxin-like protein K05838 ybbN; putative thioredoxin
D PSHAa0991 grxA; glutaredoxin 1 redox coenzyme for glutathione-dependent ribonucleotide reductase K03674 grxA; glutaredoxin 1
D PSHAa0368 glutaredoxin 3 GrxC K03676 grxC; glutaredoxin 3
D PSHAb0031 grxC; glutaredoxin 3 (Grx3) K03676 grxC; glutaredoxin 3
D PSHAa1216 conserved protein of unknown function with thioredoxin-like domain K07390 grxD; monothiol glutaredoxin
D PSHAa0248 dsbA; periplasmic protein, disulfide bond formation K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PSHAa0249 porA; periplasmic protein, disulfide bond formation K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PSHAa0837 dsbB; disulfide bond formation protein B (Disulfide oxidoreductase) K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PSHAa0515 dsbC; disulfide bond isomerase, periplasmic; chaperone; activated by DsbD; homodimeric K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PSHAa0263 dipZ; thiol:disulfide interchange protein[Precursor] (Protein-disulfide reductase) (Disulfide reductase) (C-type cytochrome biogenesis protein cycZ) (Inner membrane copper tolerance protein) K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D PSHAa0828 ccmG; thiol:disulfide interchange protein dsbE (cytochrome c biogenesis protein ccmG) K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D PSHAb0164 dsbG; putative disulfide isomerase, thiol-disulfide oxidase, periplasmic K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:pha04131]
D PSHAb0142 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PSHAb0280 putative membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PSHAb0548 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PSHAa1900 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSHAa1368 epd; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSHAa1406 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PSHAa1207 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:pha04121]
C 03051 Proteasome [BR:pha03051]
D PSHAa1207 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pha03032]
D PSHAa1964 rnhA; RNase HI, degrades RNA of DNA-RNA hybrids K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PSHAa1287 hupA; DNA-binding protein HU-alpha (HU-2), likely to play a role in DNA replication and in rpo translation K05787 hupA; DNA-binding protein HU-alpha
D PSHAb0462 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D PSHAa2059 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D PSHAa1902 ihfA; integration host factor (IHF), alpha subunit, DNA-bending protein, DNA replication K04764 ihfA; integration host factor subunit alpha
D PSHAa1426 ihfB; putative integration host factor (iHF), beta subunit, site-specific recombination K05788 ihfB; integration host factor subunit beta
D PSHAa0001 dnaA; DNA replication initiator protein, transcriptional regulator of replication and other genes; binds DNA at DnaA boxes, binds cardiolipin and other acidic phospholipids, binds ATP K02313 dnaA; chromosomal replication initiator protein
D PSHAa2435 dnaB; replicative DNA helicase; chromosome replication; chain elongation K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PSHAa0350 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PSHAa2705 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D PSHAa2015 dnaE; DNA polymerase III, alpha subunit; the entire polymerase contains 10 subunits K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSHAa0002 dnaN; DNA polymerase III, beta-subunit; processivity clamp of DNA polymerase III K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSHAa2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PSHAa1029 holA; Putative DNA polymerase III, delta subunit, probably ATP hydrolase K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSHAa1802 holB; putative DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSHAa1435 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1963 dnaQ; DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa0589 putative DNA polymerase, exonuclease activity K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1996 conserved protein of unknown function; putative enzyme K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1201 putative DnaX, DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSHAa2016 rnhB; RNAse HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PSHAa2757 polA; multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); 3'->5' polymerase; 3'->5' exonuclease (C-terminal) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PSHAa1083 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PSHAb0560 tus; putative DNA replication terminus site-binding protein (Ter binding protein) K10748 tus; DNA replication terminus site-binding protein
D PSHAa2712 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSHAa1635 seqA; SeqA protein, recognizes hemimethylated GATC motifs; negative modulator of replication initiation; SeqA foci required for chromosome segregation K03645 seqA; negative modulator of initiation of replication
D PSHAa1905 hda; putative regulatory factor involved in inactivation of DnaA K10763 hda; DnaA-homolog protein
D PSHAa1421 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PSHAa0004 gyrB; DNA gyrase, subunit B (type II topoisomerase) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PSHAa2585 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PSHAa2587 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PSHAa1348 topA; DNA topoisomerase type I, omega protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PSHAa2345 DNA topoisomerase III (C-terminal part) K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D PSHAa2356 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pha03036]
D PSHAa0732 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PSHAb0548 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PSHAa1287 hupA; DNA-binding protein HU-alpha (HU-2), likely to play a role in DNA replication and in rpo translation K05787 hupA; DNA-binding protein HU-alpha
D PSHAb0462 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D PSHAa2059 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D PSHAa1902 ihfA; integration host factor (IHF), alpha subunit, DNA-bending protein, DNA replication K04764 ihfA; integration host factor subunit alpha
D PSHAa1426 ihfB; putative integration host factor (iHF), beta subunit, site-specific recombination K05788 ihfB; integration host factor subunit beta
D PSHAa2878 cbpA; curved DNA-binding protein, co-chaperone of DnaK (Hsp40 family) K05516 cbpA; curved DNA-binding protein
D PSHAa2877 conserved protein of unknown function K18997 cbpM; chaperone modulatory protein CbpM
D PSHAa0001 dnaA; DNA replication initiator protein, transcriptional regulator of replication and other genes; binds DNA at DnaA boxes, binds cardiolipin and other acidic phospholipids, binds ATP K02313 dnaA; chromosomal replication initiator protein
D PSHAa2524 conserved protein of unknown function, highly conserved in gamma-proteobacteria K12961 diaA; DnaA initiator-associating protein
D PSHAa2954 dpsB; DNA-binding DPS protein K04047 dps; starvation-inducible DNA-binding protein
D PSHAa2456 dps; stress response DNA-binding protein Dps K04047 dps; starvation-inducible DNA-binding protein
D PSHAa0346 fis; DNA-binding protein for site-specific recombination and inversion, transcription of rRNA and tRNA operons, and DNA replication K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PSHAa0271 hfq; Host factor-I; polyA binding protein K03666 hfq; host factor-I protein
D PSHAa2263 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PSHAa1717 lrp; transcriptional regulator of lrp regulon and for high-affinity branched-chain amino acid transport system (AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PSHAa0053 putative transcriptional regulator (LRP/AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PSHAa1817 putative nucleotide associated protein, present in spermidine nucleoids K06899 ndpA; nucleoid-associated protein
D PSHAa1081 putative SMC family protein K03529 smc; chromosome segregation protein
D PSHAa1296 conserved protein of unknown function K05896 scpA; segregation and condensation protein A
D PSHAa1341 conserved protein of unknown function K06024 scpB; segregation and condensation protein B
D PSHAa2500 ftsA; Cell division protein K03590 ftsA; cell division protein FtsA
D PSHAa0683 putative cell division protein; septum localization dependent on Ftsl and FtsQ K05589 ftsB; cell division protein FtsB
D PSHAa0355 ftsE; cell division protein (ABC transporteur superfamily, ATP_binding) K09812 ftsE; cell division transport system ATP-binding protein
D PSHAa2510 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PSHAa1716 putative cell division protein with DNA segregation ATPase FtsK/SpoIIIE domain K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PSHAa2511 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PSHAa2729 conserved protein of unknown function, putative cell division protein K03591 ftsN; cell division protein FtsN
D PSHAa2501 ftsQ; cell division protein, needs FtsK for localisation at septum, FtsL, FtsB and FtsQ form a complex in vivo K03589 ftsQ; cell division protein FtsQ
D PSHAa2505 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PSHAa0356 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D PSHAa2499 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D PSHAa1082 putative Cell division protein zipA homolog K03528 zipA; cell division protein ZipA
D PSHAa0295 conserved protein of unknown function; putative FtsZ-associated protein K09888 zapA; cell division protein ZapA
D PSHAa1668 ycbW; putative orphan protein K18657 zapC; cell division protein ZapC
D PSHAa2534 yhcM; putative ATPase K06916 zapE; cell division protein ZapE
D PSHAa0468 conserved protein of unknown function; putative ATPase K06916 zapE; cell division protein ZapE
D PSHAa0268 amiB; N-acetylmuramoyl-l-alanine amidase II, murein hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PSHAb0323 acrE; putative lipoprotein component of efflux protein (exporter) K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAa2272 conserved protein of unknown function; putative membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAb0507 minC; cell division inhibitor, inhibits FtsZ ring formation K03610 minC; septum site-determining protein MinC
D PSHAb0506 minD; cell division inhibitor, membrane ATPase, activates MinC K03609 minD; septum site-determining protein MinD
D PSHAb0505 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D PSHAa2645 ttk; putative transcriptional regulator of dUTPase (TetR/AcrR family) K05501 slmA; TetR/AcrR family transcriptional regulator
D PSHAa1635 seqA; SeqA protein, recognizes hemimethylated GATC motifs; negative modulator of replication initiation; SeqA foci required for chromosome segregation K03645 seqA; negative modulator of initiation of replication
D PSHAa2682 mreB; Rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PSHAa2681 mreC; putative rod shape-determining protein (partial) K03570 mreC; rod shape-determining protein MreC
D PSHAa2680 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD
D PSHAa1024 mrdB; rod shape-determining membrane protein; cell elongation K05837 rodA; rod shape determining protein RodA
D PSHAa3017 parA; transcriptional regulator of chromosome partitioning protein; ParA family protein; could be a protein tyrosine kinase K03496 parA; chromosome partitioning protein
D PSHAa1599 putative Soj protein, ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D PSHAa0816 putative ParA family protein K03496 parA; chromosome partitioning protein
D PSHAb0001 putative ATPase involved in chromosome partitioning (parA family protein) K03496 parA; chromosome partitioning protein
D PSHAa3016 parB; ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PSHAb0002 putative transcriptional regulator for chromosome partitioning (parB family protein) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PSHAa2585 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PSHAa2587 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PSHAa3019 mnmG; tRNA modification, oxidoreductase-like with FAD/NAD(P)-binding domain K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PSHAa3018 gidB; putative S-adenosyl-L-methionine-dependent methyltransferase domain, could be a tRNA or lipid methylase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PSHAa0090 xerC; site-specific recombinase K03733 xerC; integrase/recombinase XerC
D PSHAa0514 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PSHAa1318 mrp; putative ATPase of the MinD/MRP superfamily K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PSHAa2993 conserved protein of unknown function K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PSHAa2753 engB; putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pha03400]
D PSHAb0293 ogt; putative Methylated-DNA-[protein]-cysteine S-methyltransferase; O6-methylguanine-DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PSHAa2200 putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PSHAb0453 phr; putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PSHAa2561 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PSHAa0554 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PSHAa1099 nth; endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on 5-formyluracil and 5-hydroxymethyluracil K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PSHAb0342 putative S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D PSHAa2744 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PSHAa0994 conserved protein of unknown function K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D PSHAb0291 putative ADA regulatory protein (Regulatory protein of adaptative response) K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PSHAa0788 tag; putative 3-methyl-adenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PSHAa0447 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PSHAa1339 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PSHAa0516 recJ; Single-stranded-DNA-specific exonuclease, 5'--> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PSHAa1083 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PSHAa2757 polA; multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); 3'->5' polymerase; 3'->5' exonuclease (C-terminal) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PSHAa2707 uvrA; DNA excision repair enzyme subunit, with UvrBC K03701 uvrA; excinuclease ABC subunit A
D PSHAa1110 uvrB; ATP-dependent DNA excision repair enzyme UvrAC K03702 uvrB; excinuclease ABC subunit B
D PSHAa1915 uvrC; DNA repair enzyme together with UvrAB; incision nuclease subunit C; repair of UV damage to DNA K03703 uvrC; excinuclease ABC subunit C
D PSHAa0122 uvrD; DNA-dependent ATPase I and helicase II; highly similar to PSHA_1_2804 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSHAa1096 uvrD; DNA helicase II. K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSHAa0222 rpoB; DNA-directed RNA polymerase beta chain (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PSHAa0223 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PSHAa2806 rpoA; DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PSHAa2791 rpoZ; DNA-directed RNA polymerase omega chain (EC 2.7. 7.6) (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PSHAa1836 mfd; transcription-repair ATP-dependent coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PSHAa0692 mutS; methyl-directed mismatch repair ATP-binding protein, dimer/tetramer, associates to MutL, triggers MutH activity on hemimethylated GATC K03555 mutS; DNA mismatch repair protein MutS
D PSHAa0269 mutL; Enzyme in GATC methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA K03572 mutL; DNA mismatch repair protein MutL
D PSHAa0743 mutH; methyl-directed mismatch repair protein with restriction endonuclease-like domain K03573 mutH; DNA mismatch repair protein MutH
D PSHAa1255 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PSHAa0647 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PSHAa2364 xseB; exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PSHAa2015 dnaE; DNA polymerase III, alpha subunit; the entire polymerase contains 10 subunits K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSHAa0002 dnaN; DNA polymerase III, beta-subunit; processivity clamp of DNA polymerase III K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSHAa2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PSHAa1029 holA; Putative DNA polymerase III, delta subunit, probably ATP hydrolase K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSHAa1802 holB; putative DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSHAa1435 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1963 dnaQ; DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa0589 putative DNA polymerase, exonuclease activity K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1996 conserved protein of unknown function; putative enzyme K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSHAa1201 putative DnaX, DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSHAa2705 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D PSHAa2712 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSHAa1858 recB; exonuclease V, beta chain with recC and recD: 5' and 3' nuclease, ATPase, recombinase, helicase K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PSHAa1859 recC; exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PSHAa1857 recD; exonuclease V, alpha chain with recC and recD: 5' and 3' nuclease, ATPase, recombinase, helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PSHAa0694 recA; RecA protein (Recombinase A) K03553 recA; recombination protein RecA
D PSHAa1876 ruvA; Holliday junction helicase, subunit A K03550 ruvA; holliday junction DNA helicase RuvA
D PSHAa1875 ruvB; Holliday junction helicase, subunit B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PSHAa1877 ruvC; Holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PSHAa2728 priA; Primosome factor Y, also called protein n'; ATP-dependent DNA helicase activity required for recA-dependent stable DNA replication mode; also involved in double-strand break repair K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PSHAa2441 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D PSHAa1993 conserved protein of unknown function K04067 priC; primosomal replication protein N''
D PSHAb0054 sbcC; exonuclease sbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D PSHAa1895 putative orphan protein K03546 sbcC; DNA repair protein SbcC/Rad50
D PSHAb0055 sbcD; exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D PSHAa0663 radA; putative DNA repair protein radA (DNA repair protein sms) K04485 radA; DNA repair protein RadA/Sms
D PSHAa0003 recF; gap repair protein with nucleoside triP hydrolase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction K03629 recF; DNA replication and repair protein RecF
D PSHAa2799 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PSHAa0734 recO; DNA repair protein recO (Recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O)
D PSHAa1203 recR; recombination protein recR K06187 recR; recombination protein RecR
D PSHAa1218 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PSHAa2381 rdgC; nucleoid-associated protein K03554 rdgC; recombination associated protein RdgC
D PSHAa1985 yejH; putative ATP-dependent helicase with nucleoside triP hydrolase domain K19789 radD; DNA repair protein RadD
D PSHAa1421 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PSHAa0004 gyrB; DNA gyrase, subunit B (type II topoisomerase) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PSHAa1348 topA; DNA topoisomerase type I, omega protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PSHAa1287 hupA; DNA-binding protein HU-alpha (HU-2), likely to play a role in DNA replication and in rpo translation K05787 hupA; DNA-binding protein HU-alpha
D PSHAb0462 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D PSHAa2059 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D PSHAa0346 fis; DNA-binding protein for site-specific recombination and inversion, transcription of rRNA and tRNA operons, and DNA replication K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PSHAa1902 ihfA; integration host factor (IHF), alpha subunit, DNA-bending protein, DNA replication K04764 ihfA; integration host factor subunit alpha
D PSHAa1426 ihfB; putative integration host factor (iHF), beta subunit, site-specific recombination K05788 ihfB; integration host factor subunit beta
D PSHAa2572 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PSHAb0119 putative helicase (recQ-like) K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PSHAa2389 dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PSHAb0536 umuC; component of DNA polymerase V with UmuD K03502 umuC; DNA polymerase V
D PSHAb0537 umuD; component of DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PSHAa2873 lexA; transcriptional repressor for SOS response K01356 lexA; repressor LexA [EC:3.4.21.88]
D PSHAa1990 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D PSHAa0531 recX; putative regulatory protein, inhibitor of RecA recombinase and coprotease activities K03565 recX; regulatory protein
D PSHAa2762 rep; Rep helicase, a single-stranded DNA-dependent ATPase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D PSHAa1890 helD; putative helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D PSHAb0497 yoaA; putative ATP-dependent helicase YoaA with nucleotide triphosphate hydrolase domain, SOS repair, DinG family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PSHAa1991 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PSHAa1418 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PSHAa1417 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pha03029]
D PSHAa2529 ubiquinol-cytochrome c reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PSHAa0997 infB; protein chain initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PSHAa1397 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PSHAa2035 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D PSHAa2911 tufB; protein chain elongation factor EF-Tu; possible GTP-binding factor (duplicate of tufA) K02358 tuf; elongation factor Tu
D PSHAa0227 tufA; protein chain elongation factor EF-Tu; GTP-binding factor K02358 tuf; elongation factor Tu
D PSHAa0226 fusA; protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D PSHAa2940 putative second protein chain elongation factor EF-G, GTP-binding, may be involved in incorporation of non-canonic amino acid K02355 fusA; elongation factor G
D PSHAa0733 era; GTP-binding protein era K03595 era; GTPase
D PSHAa2413 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSHAa0545 tyrZ; Tyrosyl-tRNA synthetase II K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSHAa1031 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PSHAa1938 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PSHAa0656 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PSHAa0910 putative allophanate hydrolase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PSHAa2705 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D PSHAa2028 ecfK; putative outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D PSHAb0357 dnaK; Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D PSHAa1222 grpE; Hsp 24 DnaK nucleotide exchange factor; probable member of the DnaK/DnaJ/GrpE foldase complex K03687 GRPE; molecular chaperone GrpE
D PSHAa0259 groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSHAa0260 groS; 10 kDa chaperonin (Protein Cpn10) (groES protein) K04078 groES; chaperonin GroES
D PSHAb0358 dnaJ; Chaperone protein dnaJ (Heat shock protein J) (HSP40), co-chaperone with DnaK K03686 dnaJ; molecular chaperone DnaJ
D PSHAb0099 iscS; Cysteine desulfurase (ThiI) (transpersulfidase) (NifS protein homolog) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa2671 iscS; cysteine desulfurase (tRNA sulfurtransferase; RNA 4-thiouridine sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa1138 putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa2668 hscB; co-chaperone protein Hsc20, involved in assembly of Fe-S clusters (specific for IscU) K04082 hscB; molecular chaperone HscB
D PSHAa1216 conserved protein of unknown function with thioredoxin-like domain K07390 grxD; monothiol glutaredoxin
D PSHAa1318 mrp; putative ATPase of the MinD/MRP superfamily K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PSHAa2227 cyoE; protoheme IX farnesyltransferase (Heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
D PSHAa2865 Polyprenyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PSHAa2870 Cytochrome c oxidase assembly protein coxG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PSHAa2866 putative Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PSHAa3022 yidC; preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PSHAa2868 Putative transmembrane cytochrome oxidase complex biogenesis factor K14998 SURF1; surfeit locus 1 family protein
D PSHAa2864 putative SCO1/SenC family protein (copper-binding protein) K07152 SCO1; protein SCO1
D PSHAa1482 putative orphan protein K07152 SCO1; protein SCO1
D PSHAa1475 conserved protein of unknown function K07152 SCO1; protein SCO1
D PSHAa1207 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pha02000]
D PSHAa1661 msbA; lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) In E.coli MsbA plays a role in lipid A and possibly glycerophospholipid transport K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PSHAa1372 putative ABC transporter, ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D PSHAa1698 putative ABC transporter, ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSHAa2841 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PSHAa2022 cydC; cysteine transport (export) protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PSHAa2021 cydD; cysteine transport (export) protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PSHAa1665 uup; putative ABC transporter, ATP_binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PSHAa2778 chlD; putative anion transport protein (ABC superfamily, ATP-binding protein) K05776 modF; molybdate transport system ATP-binding protein
D PSHAa1612 putative ABC-type transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D PSHAa2663 fbpA; Iron(III) ABC transporter, periplasmic iron(III)-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PSHAa2662 fbpB; Iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D PSHAa1613 putative ABC-type transport system, permease component K02011 afuB; iron(III) transport system permease protein
D PSHAa2661 fbpC; Iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PSHAa1614 putative ABC-type transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PSHAb0229 putative ABC-type transport system, periplasmic component K05777 ynjB; putative thiamine transport system substrate-binding protein
D PSHAb0228 putative ABC-type transport system, permease component K05778 ynjC; putative thiamine transport system permease protein
D PSHAb0227 putative ABC transporter ATP-binding K05779 ynjD; putative thiamine transport system ATP-binding protein
D PSHAa2542 putative transport protein (ABC superfamily, periplasmic binding component) K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PSHAa2543 putative transport protein (ABC superfamily, membrane) K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PSHAa2544 putative transport protein (ABC superfamily, atp-binding) K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PSHAa2541 putative ABC-type transport system, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D PSHAa1129 putative transport protein (ABC superfamily, atp_bind and membrane) K07323 mlaC; phospholipid transport system substrate-binding protein
D PSHAa2540 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D PSHAa0599 putative phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D PSHAa0309 pstC; putative phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D PSHAa0310 pstA; putative phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D PSHAa0311 pstB; Phosphate import ATP-binding protein pstB(Phosphate-transporting ATPase)(ABC phosphate transporter) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PSHAa0590 conserved protein of unknown function; putative extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PSHAa2051 sapA; putative ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PSHAa2052 sapB; peptide transport protein (ABC superfamily, membrane) K19227 sapB; cationic peptide transport system permease protein
D PSHAa2053 sapC; peptide transport protein (ABC superfamily, membrane) K19228 sapC; cationic peptide transport system permease protein
D PSHAa2054 sapD; peptide transport protein (ABC superfamily, atp_bind) K19229 sapD; cationic peptide transport system ATP-binding protein
D PSHAa2055 sapF; peptide transport protein (ABC superfamily, atp_bind) K19230 sapF; cationic peptide transport system ATP-binding protein
D PSHAb0068 hmuT; putative Hemin-binding periplasmic ABC-transport system protein K25132 hmuT; heme transport system substrate-binding protein
D PSHAb0067 hmuU; Hemin ABC-transport system permease K25133 hmuU; heme transport system permease protein
D PSHAb0066 hmuV; putative Hemin ABC transport system ATP-binding protein hmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PSHAa2565 putative Iron-compound ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PSHAa2566 fhuC; putative Iron-compound ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PSHAa2562 putative ABC transporter, periplasmic substrate-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D PSHAa2422 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D PSHAa2421 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D PSHAa2550 putative transport protein (ABC superfamily, atp-binding protein) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PSHAa1625 putative ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D PSHAa1626 sodium ABC exporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D PSHAa1388 lolC; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein
D PSHAa1390 lolE; putative lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PSHAa1389 lolD; transport protein of inner membrane lipoproteins (ABC superfamily, ATP-binding) K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PSHAa0825 ccmD; heme exporter protein D (Cytochrome c-type biogenesis protein ccmD) K02196 ccmD; heme exporter protein D
D PSHAa0824 ccmC; heme exporter protein C (Cytochrome c-type biogenesis protein ccmC) K02195 ccmC; heme exporter protein C
D PSHAa0823 ccmB; heme exporter protein B, ABC superfamily (Cytochrome c-type biogenesis protein ccmB) K02194 ccmB; heme exporter protein B
D PSHAa0822 ccmA; heme exporter protein A, ABC superfamily (Cytochrome c-type biogenesis ATP-binding protein ccmA) K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PSHAa0356 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D PSHAa0355 ftsE; cell division protein (ABC transporteur superfamily, ATP_binding) K09812 ftsE; cell division transport system ATP-binding protein
D PSHAa2296 putative ABC-type transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSHAa1924 conserved protein of unknown function K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSHAa1923 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSHAa2297 putative ATP-binding component of ABC transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSHAa2828 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PSHAa0450 conserved protein of unknown function; putative transmembrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PSHAa1878 conserved protein of unknown function; putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PSHAa0451 putative ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PSHAa2827 putative ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PSHAa1879 putative Lipoprotein releasing system ATP-binding component of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PSHAb0364 putative sodium-dependent transporter (di-or tri-carboxylates) K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PSHAa1735 mdtK; multidrug transport protein (MATE family) K26939 norM; MATE family, multidrug efflux pump
D PSHAa2862 DNA-damage-inducible protein F (putative NA+ driven efflux pump) K26937 dinF; MATE family, multidrug efflux pump
D PSHAa2154 putative efflux pump K26937 dinF; MATE family, multidrug efflux pump
D PSHAa1109 putative multi antimicrobial extrusion protein MatE/Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D PSHAa1746 putative hexuronate transport protein (MFS family) K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D PSHAa2409 putative permease K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D PSHAb0183 putative transporter K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D PSHAa2248 ampG; putative muropeptide transport protein (mFS family), highly conserved in gamma-proteobacteria K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PSHAa2173 putative transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PSHAa1223 bcr; putative efflux pump K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PSHAa2207 putative carbohydrates permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PSHAa0650 lmrb; Lincomycin resistance protein lmrB K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D PSHAa0283 putative transport protein (MFS family) K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PSHAa0746 ptsP; phosphoenolpyruvate-protein phosphotransferase ptsP (Phosphotransferase system, enzyme I) (Enzyme I-Ntr) K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PSHAa2555 npr; putative phosphocarrier protein NPr (HPr-like), nitrogen-related K08485 ptsO; phosphocarrier protein NPr
D PSHAa1333 putative PTS system protein (partial match) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PSHAa2553 ptsN; PTS family enzyme IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PSHAb0552 glpF; putative glycerol diffusion channel K02440 glpF; glycerol uptake facilitator
D PSHAb0504 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D PSHAa0137 putative potassium channel K10716 kch; voltage-gated potassium channel
D PSHAa2614 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D PSHAb0529 putative cation transporter component K08714 VGSC; voltage-gated sodium channel
D PSHAa2257 putative Ammonium/methylammonium transporter amtB K03320 amt; ammonium transporter, Amt family
D PSHAb0017 putative Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PSHAa2489 putative glutathione S-transferase enzyme with thioredoxin-like domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PSHAa0526 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PSHAb0122 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PSHAa2527 sspA; stringent starvation protein A, regulator of transcription K03599 sspA; stringent starvation protein A
D PSHAa0962 conserved protein of unknown function; putative Von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D PSHAa0630 conserved protein of unknown function; putative Inter-alpha-trypsin inhibitor domain protein K07114 yfbK; Ca-activated chloride channel homolog
D PSHAa0961 conserved protein of unknown function; putative TPR domain protein K07114 yfbK; Ca-activated chloride channel homolog
D PSHAa1683 putative transport protein (TEGT family) (partial match) K19416 yccA; modulator of FtsH protease
D PSHAb0176 putative mechanosensitive channel family protein (MscS family UPF0003) K03442 mscS; small conductance mechanosensitive channel
D PSHAa0396 mscS; putative mechanosensitive channel protein (MscS family) K03442 mscS; small conductance mechanosensitive channel
D PSHAa2520 putative mechanosensitive channel protein (MscS family) K03442 mscS; small conductance mechanosensitive channel
D PSHAa2557 putative mechanosensitive channel protein (MscS family) K03442 mscS; small conductance mechanosensitive channel
D PSHAa0714 conserved protein of unknown function; putative mechanosensitive channel protein (MscS family) K03442 mscS; small conductance mechanosensitive channel
D PSHAa0948 conserved protein of unknown function; putative membrane protein K03442 mscS; small conductance mechanosensitive channel
D PSHAa2445 ybdG; putative membrane protein K16053 ybdG; miniconductance mechanosensitive channel
D PSHAa2844 putative transport protein K16053 ybdG; miniconductance mechanosensitive channel
D PSHAa2556 putative magnesium transporter K06213 mgtE; magnesium transporter
D PSHAa0712 putative Magnesium transporter K06213 mgtE; magnesium transporter
D PSHAa1231 conserved protein of unknown function K06213 mgtE; magnesium transporter
D PSHAa0814 putative Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D PSHAa2363 motA; Flagellar motor component (Chemotaxis motA protein) K02556 motA; chemotaxis protein MotA
D PSHAa0815 motB; putative chemotaxis protein K02557 motB; chemotaxis protein MotB
D PSHAa2362 motB; sodium-driven polar flagellar protein K02557 motB; chemotaxis protein MotB
D PSHAa0276 Sodium-type polar flagellar protein motX K21217 motX; sodium-type polar flagellar protein MotX
D PSHAa2115 motY; putative Component of sodium-driven polar flagellar motor K21218 motY; sodium-type flagellar protein MotY
D PSHAb0070 putative biopolymer transport protein, MotA/TolQ/ExbB proton channel domain K03561 exbB; biopolymer transport protein ExbB
D PSHAa1189 ExbB2; TonB system transport protein ExbB2 K03561 exbB; biopolymer transport protein ExbB
D PSHAa1188 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PSHAb0521 putative Tol protein K03561 exbB; biopolymer transport protein ExbB
D PSHAb0522 putative TonB system-dependent transport protein K03561 exbB; biopolymer transport protein ExbB
D PSHAa1190 ExbD2; TonB system transport protein ExbD2 K03559 exbD; biopolymer transport protein ExbD
D PSHAb0523 putative TonB system-dependent transport protein K03559 exbD; biopolymer transport protein ExbD
D PSHAa1874 tolQ; inner membrane protein required for outer membrane integrity, uptake of group A colicins and phage DNA K03562 tolQ; biopolymer transport protein TolQ
D PSHAa1873 tolR; tol protein, role in outer membrane integrity, uptake of group A colicins (TonB-independent), and phage DNA K03560 tolR; biopolymer transport protein TolR
D PSHAa2579 putative transporter protein K16074 zntB; zinc transporter
D PSHAa1713 crcB; protein crcB homolog K06199 crcB; fluoride exporter
D PSHAa0665 conserved protein of unknown function; putative membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D PSHAa0713 conserved protein of unknown function; putative membrane protein K16302 CNNM; metal transporter CNNM
D PSHAa0133 conserved protein of unknown function K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSHAa0939 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSHAb0318 ytfL; putative membrane protein with CBS regulatory domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSHAb0217 malB; putative maltoporin, high-affinity receptor for maltose and maltoseoligosaccharides K02024 lamB; maltoporin
D PSHAa0183 putative outer membrane protein; signal peptide K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PSHAa1621 putative TonB-dependent receptor protein with OmpA-like transmembrane domain K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PSHAa2426 fadL; Long-chain fatty acid transport protein precursor (Outer membrane fadL protein) K06076 fadL; long-chain fatty acid transport protein
D PSHAa1999 conserved protein of unknown function; putative SalD K06076 fadL; long-chain fatty acid transport protein
D PSHAb0512 putative Ton-B dependent protein (could be involved in iron transport) K16090 fiu; catecholate siderophore receptor
D PSHAa2478 putative TonB-dependent receptor protein K16091 fecA; Fe(3+) dicitrate transport protein
D PSHAa2275 putative TonB-dependent Outer membrane receptor K16092 btuB; vitamin B12 transporter
D PSHAa1242 putative orphan protein K16092 btuB; vitamin B12 transporter
D PSHAa0695 putative outer membrane receptor for ferric iron uptake; putative TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D PSHAb0251 irgA; Iron-regulated outer membrane virulence protein homolog K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PSHAb0072 hmuR; putative Hemin receptor protein HmuR K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PSHAa0108 putative TonB-dependent receptor; putative outer membrane bound protein involved in iron chelated transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1271 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1415 conserved protein of unknown function; putative outer membrane protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1584 putative TonB-dependent receptor for ferrichrome transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa2206 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa2973 putative secreted TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1740 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1824 putative ferric enterobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1840 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAb0113 putative TonB-dependent receptor for Fe K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1862 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1352 putative TonB-dependent receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa0876 conserved protein of unknown function; could be a lipoprotein or a secreted protein; could be a binding protein for a transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa2180 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAb0286 putative TonB dependent outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa2947 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa0476 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa0428 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa0840 conserved protein of unknown function; putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa2407 putative TonB-dependent receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa2119 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa2457 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1987 putative TonB-dependent receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa1989 conserved protein of unknown function K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa2138 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAb0254 putative Outer membrane TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAb0279 putative outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAb0299 putative TonB-dependent outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAb0158 putative TonB-dependent receptor with TonB-box K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAb0165 putative TonB-dependent receptor; outer membrane K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PSHAa0577 putative metal ion efflux outer membrane factor protein family K15725 czcC; outer membrane protein, heavy metal efflux system
D PSHAa2592 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D PSHAb0372 putative lipoprotein, possibly associated with the outermembrane K18300 oprN; outer membrane protein, multidrug efflux system
D PSHAb0325 putative outer membrane protein oprM precursor of a metabolite export system K18139 oprM; outer membrane protein, multidrug efflux system
D PSHAa1781 putative polysaccharide export-related protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D PSHAa2028 ecfK; putative outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D PSHAb0135 yfgL; putative serine/threonine protein kinase with quinoprotein alcohol dehydrogenase domain K17713 bamB; outer membrane protein assembly factor BamB
D PSHAa1125 putative lipoprotein-34 NlpB K07287 bamC; outer membrane protein assembly factor BamC
D PSHAa0932 ecfD; putative lipoprotein with tetratricopeptide repeats (TPR) domain K05807 bamD; outer membrane protein assembly factor BamD
D PSHAa0844 conserved protein of unknown function; putative small protein A [Precursor] (smpA) K06186 bamE; outer membrane protein assembly factor BamE
D PSHAa1983 conserved protein of unknown function; putative outer membrane protein K07278 tamA; translocation and assembly module TamA
D PSHAa1982 conserved protein of unknown function K09800 tamB; translocation and assembly module TamB
D PSHAa1347 conserved putatively secreted protein of unknown function K21449 ata; trimeric autotransporter adhesin
D PSHAa1556 putative orphan protein; could be an antifreeze protein K21449 ata; trimeric autotransporter adhesin
D PSHAa2549 conserved protein of unknown function; putative transport protein (ABC superfamily, periplasmic binding component) K09774 lptA; lipopolysaccharide export system protein LptA
D PSHAa2548 conserved protein of unknown function K11719 lptC; lipopolysaccharide export system protein LptC
D PSHAa2632 imp; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D PSHAa1030 rlpB; putative minor lipoprotein K03643 lptE; LPS-assembly lipoprotein
D PSHAa2165 bcsC; cellulose synthase operon protein C K20543 bcsC; cellulose synthase operon protein C
D PSHAa1782 conserved protein of unknown function K20920 vpsM; polysaccharide biosynthesis protein VpsM
D PSHAa1043 corC; magnesium and cobalt efflux protein corC K06189 corC; hemolysin (HlyC) family protein
D PSHAa0716 conserved protein of unknown function; putative inner membrane protein K06518 cidA; holin-like protein
D PSHAa1356 putative sugar transporter K16211 malY; maltose/moltooligosaccharide transporter
D PSHAb0288 putative cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PSHAb0274 putative CzcD, Co/Zn/Cd efflux system component protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PSHAa0372 putative transport protein K13283 fieF; ferrous-iron efflux pump FieF
D PSHAa0579 czcA; Cobalt-zinc-cadmium resistance protein czcA (Cation efflux system protein czcA) K15726 czcA; heavy metal efflux system protein
D PSHAa0305 cusA; cation efflux system protein cusA K07787 cusA; copper/silver efflux system protein
D PSHAb0371 similar to AcrAB-TolC efflux pump K18299 mexF; multidrug efflux pump
D PSHAb0324 acrB; putative multidrug efflux pump (RND family) K18138 acrB; multidrug efflux pump
D PSHAa2273 putative acrB/acrD/acrF acriflavin resistance family protein K18138 acrB; multidrug efflux pump
D PSHAa2214 qacF; Quaternary ammonium compound-resistance protein (Quarternary ammonium determinant F) K03297 emrE; small multidrug resistance pump
D PSHAa0082 putative exporter protein (SMR family) K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PSHAa2462 mdtI; putative multidrug transport protein (SmR superfamily) K11742 mdtI; spermidine export protein MdtI
D PSHAa2461 mdtJ; putative multidrug transport protein (SmR superfamily) K11743 mdtJ; spermidine export protein MdtJ
D PSHAb0020 putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D PSHAb0256 rhtA; Transporter involved in threonine and homoserine efflux K11939 rhtA; inner membrane transporter RhtA
D PSHAa2570 rarD; conserved protein of unknown function; putative uncharacterized transport protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PSHAa1175 conserved protein of unknown function; putative transmembrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PSHAb0479 putative idonate or gluconate permease K06156 gntU; Gnt-I system low-affinity gluconate transporter
D PSHAa1496 conserved protein of unknown function K07084 yuiF; putative amino acid transporter
D PSHAa0978 putative L-lactate permease K03303 lutP; lactate permease
D PSHAa1072 putative glycine betaine transporter K05020 opuD; glycine betaine transporter
D PSHAb0417 putative quaternary ammonium permease K05020 opuD; glycine betaine transporter
D PSHAa2041 betT; putative high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D PSHAa2545 putative Na:Ca transport protein (CacA family) K07301 yrbG; cation:H+ antiporter
D PSHAb0443 putative transport protein K14392 panF; sodium/pantothenate symporter
D PSHAa0587 putative sodium/solute symporter family protein K14393 actP; cation/acetate symporter
D PSHAa2084 gltS; glutamate transport protein (GltS family) K03312 gltS; glutamate:Na+ symporter, ESS family
D PSHAa1677 putative Na+/H+ antiporter NnaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D PSHAb0350 putative Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D PSHAb0555 putative Na+/H+ antiporter, may regulate cell volume and cold resistance K24160 NHA1; sodium/hydrogen antiporter
D PSHAb0106 cvrA; putative Cell volume regulation protein A K11105 cvrA; potassium/hydrogen antiporter
D PSHAa1257 putative Na+/H+ antiporter K03316 nhaP; Na+:H+ antiporter
D PSHAb0496 putative Na+/H+ antiporter K03316 nhaP; Na+:H+ antiporter
D PSHAa2974 putative protein TrkB involved in potassium or sodium transport (efflux) K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PSHAa2010 putative Glutathione-regulated potassium-efflux system protein KefB K03455 KEA1_2_3; K+:H+ antiporter
D PSHAa0015 trkH; potassium transport protein, requires TrkE (Trk family) K03498 trkH; trk/ktr system potassium uptake protein
D PSHAa0020 trkA; Trk system; major constitutive K+ transport system; potassium transport inner membrane protein subunit; six transmembrane channel K03499 trkA; trk/ktr system potassium uptake protein
D PSHAb0378 pyrP; Uracil permease (Uracil transporter) K02824 uraA; uracil permease
D PSHAa1160 conserved protein of unknown function; putative membrane protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D PSHAa2117 tyrP; tyrosine-specific transport protein (HAAAP family) K03834 tyrP; tyrosine-specific transport protein
D PSHAa0200 sdaC; putative serine transport protein (HAAAP family) K03837 sdaC; serine transporter
D PSHAb0111 putative Benzoate transporter K05782 benE; benzoate membrane transport protein
D PSHAa2252 putative Voltage-gated ClC-type chloride channel clcA K03281 clcA; chloride channel protein, CIC family
D PSHAa2843 putative Chromate/sulfate transporter K07240 chrA; chromate transporter
D PSHAa1403 Sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D PSHAa1004 putative NADH dehydrogenase K05559 phaA; multicomponent K+:H+ antiporter subunit A
D PSHAa1005 Putative pH adaptation potassium efflux protein K05560 phaC; multicomponent K+:H+ antiporter subunit C
D PSHAa1006 putative NADH dehydrogenase K05561 phaD; multicomponent K+:H+ antiporter subunit D
D PSHAa1007 putative potassium efflux system protein PhaE K05562 phaE; multicomponent K+:H+ antiporter subunit E
D PSHAa1008 putative pH adaptation potassium efflux system protein F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D PSHAa1009 putative multiple resistance/pH regulation related protein G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D PSHAa0916 mviN; virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase
D PSHAa0980 putative membrane protein K13936 mdcF; malonate transporter and related proteins
D PSHAb0240 putative efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D PSHAa2839 putative export protein (LysE family) K05835 rhtC; threonine efflux protein
D PSHAa0333 putative transporter K05835 rhtC; threonine efflux protein
D PSHAa0064 putative amino acid permease K26605 azlC; branched chain amino acid efflux pump
D PSHAa0063 putative transporter protein K26606 azlD; branched chain amino acid efflux pump
D PSHAa1137 yfgO; putative permease (PerM family) K03548 perM; putative permease
D PSHAa2505 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PSHAb0280 putative membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PSHAa1191 TonB2; TonB2 protein; iron acquisition via a siderophore-mediated active transport. K03832 tonB; periplasmic protein TonB
D PSHAb0524 putative TonB2 protein K03832 tonB; periplasmic protein TonB
D PSHAb0069 putative membrane protein with TonB domain K03832 tonB; periplasmic protein TonB
D PSHAa1870 pal; required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA K03640 pal; peptidoglycan-associated lipoprotein
D PSHAa1872 putative TolA protein K03646 tolA; colicin import membrane protein
D PSHAa1871 tolB; required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA K03641 tolB; TolB protein
D PSHAa0540 oadB; Oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PSHAa0539 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D PSHAa0538 oadG; putative oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D PSHAa0578 czcB; putative Cobalt-zinc-cadmium resistance protein; (cation efflux system protein) K15727 czcB; membrane fusion protein, heavy metal efflux system
D PSHAa0304 putative cation efflux system protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D PSHAa0559 putative Secretion protein K18901 bpeE; membrane fusion protein, multidrug efflux system
D PSHAa2958 putative multidrug resistance protein K18901 bpeE; membrane fusion protein, multidrug efflux system
D PSHAb0370 putative lipoprotein component of a efflux transporter K18298 mexE; membrane fusion protein, multidrug efflux system
D PSHAb0323 acrE; putative lipoprotein component of efflux protein (exporter) K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAa2272 conserved protein of unknown function; putative membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAa1780 putative Exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PSHAa2431 putative transporter protein K03811 pnuC; nicotinamide mononucleotide transporter
D PSHAa0827 ccmF; cytochrome c-type biogenesis protein ccmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PSHAa1383 putative transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PSHAa1379 conserved protein of unknown function K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PSHAb0008 Putative copper export protein K07245 pcoD; copper resistance protein D
D PSHAb0009 putative copper resistance (CopC-like) K07156 copC; copper resistance protein C
D PSHAa2838 mipA; putative scaffolding protein for murein-synthesizing holoenzyme, outer membrane protein K07274 mipA; MipA family protein
D PSHAa0851 conserved protein of unknown function; putative MltA-interacting MipA family; putative signal peptide K07274 mipA; MipA family protein
D PSHAa0863 conserved protein of unknown function; putative outer membrane protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:pha02044]
D PSHAa2592 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D PSHAa2267 putative ATPase and membrane protein K02450 gspA; general secretion pathway protein A
D PSHAa2266 conserved protein of unknown function; putative membrane protein K02451 gspB; general secretion pathway protein B
D PSHAa0231 gspC; putative general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D PSHAa0232 exeD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PSHAa0233 exeE; General secretion pathway protein E (Type II traffic warden ATPase) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PSHAa0234 gspF; putative general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D PSHAa0235 gspG; putative general secretion pathway protein G [Precursor] K02456 gspG; general secretion pathway protein G
D PSHAa0236 gspH; putative general secretion pathway protein H precursor K02457 gspH; general secretion pathway protein H
D PSHAa0237 gspI; putative general secretion pathway protein I [precursor] K02458 gspI; general secretion pathway protein I
D PSHAa0238 gspJ; putative general secretion pathway protein J [Precursor] K02459 gspJ; general secretion pathway protein J
D PSHAa0239 gspK; putative general secretion pathway protein K02460 gspK; general secretion pathway protein K
D PSHAa0240 putative general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D PSHAa0241 putative general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D PSHAa0242 putative general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D PSHAa0380 pilD; Type 4 prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PSHAa0384 ppdD; putative prepilin peptidase dependent protein D K02650 pilA; type IV pilus assembly protein PilA
D PSHAa0383 putative Pilus biogenesis protein tapA precursor K02650 pilA; type IV pilus assembly protein PilA
D PSHAa0378 pilB; type IV pilus biogenesis protein PilB K02652 pilB; type IV pilus assembly protein PilB
D PSHAa0381 pilC; type IV pilus biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
D PSHAa0928 pilE; putative fimbrial protein precursor K02655 pilE; type IV pilus assembly protein PilE
D PSHAa2720 pilM; putative Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D PSHAa2719 pilN; putative Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D PSHAa2718 pilO; putative Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D PSHAa2717 pilP; putative Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D PSHAa2716 pilQ; putative type IV pilus biogenesis protein PilQ (cytoplasmic ATPase) K02666 pilQ; type IV pilus assembly protein PilQ
D PSHAa2603 pilT; twitching motility protein PilT (type IV pili) K02669 pilT; twitching motility protein PilT
D PSHAa2602 pilU; twitching motility protein PilU (type IV pili) K02670 pilU; twitching motility protein PilU
D PSHAa0924 putative type IV pilus biogenesis protein; membrane protein K02671 pilV; type IV pilus assembly protein PilV
D PSHAa0925 conserved protein of unknown function K02672 pilW; type IV pilus assembly protein PilW
D PSHAa0927 conserved protein of unknown function; putative pilin biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D PSHAa1801 pilZ; type 4 fimbrial biogenesis protein PILZ K02676 pilZ; type IV pilus assembly protein PilZ
D PSHAa0930 putative Type IV pilus biogenesis protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D PSHAa0929 putative Type IV pilus biogenesis protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D PSHAa2076 putative orphan protein; putative membrane protein K08086 fimV; pilus assembly protein FimV
D PSHAa2689 mshA; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshA (pilus type IV) K10924 mshA; MSHA pilin protein MshA
D PSHAa2690 mshB; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshB (pilus type IV) K10925 mshB; MSHA pilin protein MshB
D PSHAa2688 mshC; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshC (pilus type IV) K10926 mshC; MSHA pilin protein MshC
D PSHAa2687 mshD; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshD (pilus type IV) K10927 mshD; MSHA pilin protein MshD
D PSHAa2692 mshE; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshE (pilus type IV) K12276 mshE; MSHA biogenesis protein MshE
D PSHAa2691 mshG; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV) K12278 mshG; MSHA biogenesis protein MshG
D PSHAa2699 putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV)with frame shift K12279 mshI; MSHA biogenesis protein MshI
D PSHAa2697 mshJ; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV) K12280 mshJ; MSHA biogenesis protein MshJ
D PSHAa2696 mshK; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshK (pilus type IV), lipoprotein K12281 mshK; MSHA biogenesis protein MshK
D PSHAa2695 mshL; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshL (pilus type IV) K12282 mshL; MSHA biogenesis protein MshL
D PSHAa2694 mshM; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshM (pilus type IV) K12283 mshM; MSHA biogenesis protein MshM
D PSHAa2693 mshN; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshN (pilus type IV) K12284 mshN; MSHA biogenesis protein MshN
D PSHAa2686 mshO; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshO (pilus type IV) K12285 mshO; MSHA biogenesis protein MshO
D PSHAa2685 mshP; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshP (pilus type IV) K12286 mshP; MSHA biogenesis protein MshP
D PSHAa2684 mshQ; putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (pilus type IV) K12287 mshQ; MSHA biogenesis protein MshQ
D PSHAa2606 putative integral membrane resistance protein K02221 yggT; YggT family protein
D PSHAa0835 conserved protein of unknown function; putative competence protein K02237 comEA; competence protein ComEA
D PSHAa1662 putative DNA internalization-related competence protein ComEC/Rec2 with Metallo-beta-lactamase superfamily domain K02238 comEC; competence protein ComEC
D PSHAa0806 flhA; flagellar biosynthesis protein, putative export protein K02400 flhA; flagellar biosynthesis protein FlhA
D PSHAa0805 flhB; Flagellar biosynthetic protein flhB, putative part of export apparatus for flagellar proteins K02401 flhB; flagellar biosynthesis protein FlhB
D PSHAa0820 conserved protein of unknown function; similar to FlhB domain protein K04061 flhB2; flagellar biosynthesis protein
D PSHAa0792 fliF; flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D PSHAa0794 fliH; putative flagellar biosynthesis; export of flagellar proteins K02411 fliH; flagellar assembly protein FliH
D PSHAa0795 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PSHAa0800 fliN; flagellar biosynthesis; component of motor switch and energizing K02417 fliN; flagellar motor switch protein FliN
D PSHAa0801 fliO; putative flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D PSHAa0802 fliP; flagellar biosynthesis K02419 fliP; flagellar biosynthesis protein FliP
D PSHAa0803 fliQ; flagellar biosynthesis K02420 fliQ; flagellar biosynthesis protein FliQ
D PSHAa0804 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR
D PSHAa0515 dsbC; disulfide bond isomerase, periplasmic; chaperone; activated by DsbD; homodimeric K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PSHAa2124 putative orphan protein K07346 fimC; fimbrial chaperone protein
D PSHAa2122 conserved protein of unknown function; putative membrane protein K12518 papC; outer membrane usher protein PapC
D PSHAb0196 csgE; curli production assembly/transport component K04337 csgE; curli production assembly/transport component CsgE
D PSHAb0195 csgF; putative curli production assembly/transport component K04338 csgF; curli production assembly/transport component CsgF
D PSHAb0194 csgG; putative assembly or transport protein for curli synthesis K06214 csgG; curli production assembly/transport component CsgG
D PSHAa2743 secA; preprotein translocase, ATPase secretion component (General Secretory Pathway) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PSHAa0369 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D PSHAa1374 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PSHAa0321 secD; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03072 secD; preprotein translocase subunit SecD
D PSHAa0216 secE; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03073 secE; preprotein translocase subunit SecE
D PSHAa0322 secF; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D PSHAa1375 putative preprotein translocase SecF, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D PSHAa0874 secG; protein-export membrane protein secG(General Secretory Pathway) K03075 secG; preprotein translocase subunit SecG
D PSHAa2810 secY; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03076 secY; preprotein translocase subunit SecY
D PSHAa0942 ffh; 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PSHAa0354 ftsY; Cell division transporter substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PSHAa0320 yajC; putative preprotein translocase IISP family, membrane subunit K03210 yajC; preprotein translocase subunit YajC
D PSHAa3022 yidC; preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PSHAa2929 tatA; twin-arginine translocase subunit, sec-independent protein export K03116 tatA; sec-independent protein translocase protein TatA
D PSHAa2930 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PSHAa2931 tatC; twin-arginine translocase subunit, sec-independent protein export K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pha02042]
D PSHAa0133 conserved protein of unknown function K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSHAa0939 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSHAb0318 ytfL; putative membrane protein with CBS regulatory domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSHAb0446 putative hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pha02022]
D PSHAa0598 phoR; phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PSHAa0597 phoB; phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PSHAa1145 Putative two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PSHAa1282 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PSHAa1283 phoP; response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PSHAa2849 envZ; sensory histidine kinase (phosphorylase) in two-component regulatory system with OmpR, regulates ompF and ompC expression, senses osmolarity (OmpR family) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PSHAa2850 ompR; response regulator in two-component regulatory system with EnvZ, regulates ompF and ompC expression (OmpR family) K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PSHAa0853 rstA; response regulator (activator) in two-component regulatory K07661 rstA; two-component system, OmpR family, response regulator RstA
D PSHAa0374 putative sensor histidine kinase protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PSHAa0375 cpxR; Transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PSHAa2196 baeS; putative sensory transduction histidine kinase in two-component regulatory system with baeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PSHAa2195 baeR; Transcriptional regulatory protein in two-component regulatory system with baeS K07664 baeR; two-component system, OmpR family, response regulator BaeR
D PSHAb0013 cusS; sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PSHAb0012 cusR; transcriptional activator of copper resistance (two-component regulatory system with CusS) K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PSHAb0161 putative sensory histidine kinase in two-component regulatory system K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PSHAb0162 DNA-binding response regulator of two-component system K07666 qseB; two-component system, OmpR family, response regulator QseB
D PSHAa0131 putative response regulator in two-component regulatory system K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D PSHAa0550 arcB; aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PSHAa0551 arcA; aerobic respiration control protein arcA (Dye resistance protein) K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PSHAa0627 putative sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PSHAa0854 rstB; sensory histidine kinase in two-component regulatory system with RstA K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PSHAa0628 conserved protein of unknown function; putative two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PSHAa1592 uhpB; sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PSHAa1591 uhpA; response regulator (activator) in two-component regulatory system wtih UhpB, regulates uhpT expression (LuxR/UhpA family) K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D PSHAa0737 barA; sensor protein barA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PSHAa0556 putative sensory box histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PSHAa1916 uvrY; putative regulator in two-component regulatory system with BarA (LuxR/UhpA familiy) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PSHAa2941 putative transcriptional regulator sensing dicarboxylates K02475 K02475; two-component system, CitB family, response regulator
D PSHAa0922 algZ; putative alginate biosynthesis protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PSHAa0923 algR; putative alginate biosynthesis regulatory protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D PSHAa1404 putative membrane protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PSHAa1405 putative response regulator in two-component regulatory system K02477 K02477; two-component system, LytTR family, response regulator
D PSHAa0164 glnL; nitrogen availability sensory kinase (soluble) in two-component regulatory system with GlnG, nitrogen regulation (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PSHAa0163 glnG; response regulator in two-component regulatory system with GlnL, nitrogen regulation (EBP family) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PSHAa0620 putative sensory histidine kinase in regulatory system K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PSHAa0622 putative response regulator in two-component regulatory system K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PSHAb0361 putative two-component regulatory system sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PSHAb0362 putative response regulator in two-component regulatory system (EBP family) K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PSHAa0812 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PSHAa0810 cheY; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAb0169 putative two domain protein: response regulator receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa0913 putative chemotaxis protein (cheY-like) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa1501 putative response regulator receiver in two-component signal transduction system K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa0813 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PSHAa0766 cheV; chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PSHAa0789 putative sensory box sensor histidine kinase in two-component regulatory system K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PSHAa0790 flaM; putative Sigma-54 dependent response regulator; regulation of polar flagellae expression K10943 flrC; two-component system, response regulator FlrC
D PSHAb0306 putative sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PSHAb0307 putative DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
D PSHAa0052 hypothetical tryptophan-rich sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PSHAb0275 putative signal transduction histidine kinase two-component system with Protein-glutamate methylesterase domain K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PSHAa0954 putative response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D PSHAa1151 putative two-component member protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D PSHAa2394 putative two-component sensor histidine kinase and response regulator hybrid K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:pha02035]
D PSHAa0812 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PSHAa0818 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PSHAa0817 conserved protein of unknown function; putative cheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D PSHAa0492 conserved protein of unknown function; putative CheC-like protein K03409 cheX; chemotaxis protein CheX
D PSHAa0767 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PSHAa0813 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PSHAa0810 cheY; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAb0169 putative two domain protein: response regulator receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa0913 putative chemotaxis protein (cheY-like) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa1501 putative response regulator receiver in two-component signal transduction system K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PSHAa0811 cheZ; chemotaxis protein cheZ K03414 cheZ; chemotaxis protein CheZ
D PSHAa0766 cheV; chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PSHAa0711 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2638 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2733 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa0848 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0121 putative Methyl-accepting or sensory transducer chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0277 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa2387 putative chemotaxis sensory protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0518 putative Chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D PSHAb0184 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PSHAa0395 putative aerotaxis sensory transducer K03776 aer; aerotaxis receptor
D PSHAa0936 putative aerotaxis sensor receptor (Aer-like) K03776 aer; aerotaxis receptor
D PSHAa0794 fliH; putative flagellar biosynthesis; export of flagellar proteins K02411 fliH; flagellar assembly protein FliH
D PSHAa0795 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PSHAa0796 fliJ; flagellar protein K02413 fliJ; flagellar protein FliJ
D PSHAa0801 fliO; putative flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D PSHAa0802 fliP; flagellar biosynthesis K02419 fliP; flagellar biosynthesis protein FliP
D PSHAa0803 fliQ; flagellar biosynthesis K02420 fliQ; flagellar biosynthesis protein FliQ
D PSHAa0804 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR
D PSHAa0806 flhA; flagellar biosynthesis protein, putative export protein K02400 flhA; flagellar biosynthesis protein FlhA
D PSHAa0805 flhB; Flagellar biosynthetic protein flhB, putative part of export apparatus for flagellar proteins K02401 flhB; flagellar biosynthesis protein FlhB
D PSHAa0793 fliG; flagellar biosynthesis; component of motor switching and energizing K02410 fliG; flagellar motor switch protein FliG
D PSHAa0799 fliM; flagellar biosynthesis; component of motor switch and energizing K02416 fliM; flagellar motor switch protein FliM
D PSHAa0800 fliN; flagellar biosynthesis; component of motor switch and energizing K02417 fliN; flagellar motor switch protein FliN
D PSHAa0792 fliF; flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D PSHAa0776 flgI; flagellar P-ring protein precursor (Basal body P-ring protein) K02394 flgI; flagellar P-ring protein FlgI
D PSHAa0765 flgA; putative flagellar biosynthesis; assembly of basal-body periplasmic P-ring K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PSHAa0775 flgH; flagellar biosynthesis; basal-body outer-membrane L (lipopolysaccharide layer) ring protein K02393 flgH; flagellar L-ring protein FlgH
D PSHAa0798 fliL; putative flagellar protein K02415 fliL; flagellar protein FliL
D PSHAa2312 putative orphan protein K02415 fliL; flagellar protein FliL
D PSHAa0791 fliE; flagellar biosynthesis; basal-body component K02408 fliE; flagellar hook-basal body complex protein FliE
D PSHAa0797 fliK; putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PSHAa0769 flgB; flagellar biosynthesis; cell-proximal portion of basal-body rod K02387 flgB; flagellar basal-body rod protein FlgB
D PSHAa0770 flgC; flagellar biosynthesis; cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D PSHAa0771 flgD; flagellar biosynthesis; initiation of hook assembly K02389 flgD; flagellar basal-body rod modification protein FlgD
D PSHAa0773 flgF; flagellar biosynthesis; cell-proximal portion of basal-body rod K02391 flgF; flagellar basal-body rod protein FlgF
D PSHAa0774 flgG; flagellar biosynthesis; cell-distal portion of basal-body rod K02392 flgG; flagellar basal-body rod protein FlgG
D PSHAa0777 flgJ; putative flagellar biosynthesis K02395 flgJ; peptidoglycan hydrolase FlgJ
D PSHAa0772 flgE; flagellar biosynthesis; hook protein K02390 flgE; flagellar hook protein FlgE
D PSHAa0778 flgK; putative flagellar hook-associated K02396 flgK; flagellar hook-associated protein 1
D PSHAa0779 flgL; putative flagellar synthesis; flagellar regulon; hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D PSHAa0763 flgN; putative flagellar biosynthesis chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D PSHAa0762 conserved protein of unknown function K09860 flgP; outer membrane protein FlgP
D PSHAa0276 Sodium-type polar flagellar protein motX K21217 motX; sodium-type polar flagellar protein MotX
D PSHAa2115 motY; putative Component of sodium-driven polar flagellar motor K21218 motY; sodium-type flagellar protein MotY
D PSHAa0781 fliC; flagellin K02406 fliC; flagellin
D PSHAa0782 putative flagellin (fliC-like) K02406 fliC; flagellin
D PSHAa0784 fliD; putative flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D PSHAa0786 fliS; putative flagellar biosynthesis protein K02422 fliS; flagellar secretion chaperone FliS
D PSHAa0809 fliA; Polar Flagellar-specific RNA polymerase sigma factor FliA (sigma F) K02405 fliA; RNA polymerase sigma factor FliA
D PSHAa0814 putative Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D PSHAa2363 motA; Flagellar motor component (Chemotaxis motA protein) K02556 motA; chemotaxis protein MotA
D PSHAa0815 motB; putative chemotaxis protein K02557 motB; chemotaxis protein MotB
D PSHAa2362 motB; sodium-driven polar flagellar protein K02557 motB; chemotaxis protein MotB
D PSHAa0787 putative flagellar regulatory protein A (polar flagellae) K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PSHAa0789 putative sensory box sensor histidine kinase in two-component regulatory system K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PSHAa0790 flaM; putative Sigma-54 dependent response regulator; regulation of polar flagellae expression K10943 flrC; two-component system, response regulator FlrC
D PSHAa0764 flgM; putative negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D PSHAa0783 flaG; putative flagellin protein K06603 flaG; flagellar protein FlaG
D PSHAa0807 flhF; putative Flagellar biosynthetic protein FlhF(Flagella associated GTP-binding protein) K02404 flhF; flagellar biosynthesis protein FlhF
D PSHAa0808 flhG; putative flagellar biosynthetic protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D PSHAa2603 pilT; twitching motility protein PilT (type IV pili) K02669 pilT; twitching motility protein PilT
D PSHAa2602 pilU; twitching motility protein PilU (type IV pili) K02670 pilU; twitching motility protein PilU
D PSHAa0384 ppdD; putative prepilin peptidase dependent protein D K02650 pilA; type IV pilus assembly protein PilA
D PSHAa0383 putative Pilus biogenesis protein tapA precursor K02650 pilA; type IV pilus assembly protein PilA
D PSHAa0378 pilB; type IV pilus biogenesis protein PilB K02652 pilB; type IV pilus assembly protein PilB
D PSHAa0381 pilC; type IV pilus biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
D PSHAa0380 pilD; Type 4 prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PSHAa2716 pilQ; putative type IV pilus biogenesis protein PilQ (cytoplasmic ATPase) K02666 pilQ; type IV pilus assembly protein PilQ
D PSHAa2717 pilP; putative Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D PSHAa2718 pilO; putative Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D PSHAa2719 pilN; putative Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D PSHAa2720 pilM; putative Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D PSHAa1801 pilZ; type 4 fimbrial biogenesis protein PILZ K02676 pilZ; type IV pilus assembly protein PilZ
D PSHAa0924 putative type IV pilus biogenesis protein; membrane protein K02671 pilV; type IV pilus assembly protein PilV
D PSHAa0925 conserved protein of unknown function K02672 pilW; type IV pilus assembly protein PilW
D PSHAa0927 conserved protein of unknown function; putative pilin biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D PSHAa0928 pilE; putative fimbrial protein precursor K02655 pilE; type IV pilus assembly protein PilE
D PSHAa2124 putative orphan protein K07346 fimC; fimbrial chaperone protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pha04812]
D PSHAa2682 mreB; Rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PSHAa2499 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D PSHAa2500 ftsA; Cell division protein K03590 ftsA; cell division protein FtsA
D PSHAb0507 minC; cell division inhibitor, inhibits FtsZ ring formation K03610 minC; septum site-determining protein MinC
D PSHAb0506 minD; cell division inhibitor, membrane ATPase, activates MinC K03609 minD; septum site-determining protein MinD
D PSHAb0505 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D PSHAa3017 parA; transcriptional regulator of chromosome partitioning protein; ParA family protein; could be a protein tyrosine kinase K03496 parA; chromosome partitioning protein
D PSHAa1599 putative Soj protein, ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D PSHAa0816 putative ParA family protein K03496 parA; chromosome partitioning protein
D PSHAb0001 putative ATPase involved in chromosome partitioning (parA family protein) K03496 parA; chromosome partitioning protein
D PSHAa3016 parB; ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PSHAb0002 putative transcriptional regulator for chromosome partitioning (parB family protein) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pha04147]
D PSHAa1207 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D PSHAb0548 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PSHAa0742 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSHAa1900 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSHAa1368 epd; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSHAa0595 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PSHAa1406 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PSHAa2247 putative Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSHAb0347 putative Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSHAa2910 putative periplasmic dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PSHAa0839 ahpCB; peroxiredoxin 2 (Thioredoxin peroxidase 1) (Thioredoxin-dependent peroxide reductase 1) (Thiol-specific antioxidant protein) (TSA) (PRP) K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PSHAa0259 groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSHAb0357 dnaK; Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D PSHAa1139 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSHAb0005 Dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PSHAa2386 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PSHAa0648 guaB; IMP dehydrogeanse K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PSHAa2911 tufB; protein chain elongation factor EF-Tu; possible GTP-binding factor (duplicate of tufA) K02358 tuf; elongation factor Tu
D PSHAa0227 tufA; protein chain elongation factor EF-Tu; GTP-binding factor K02358 tuf; elongation factor Tu
D PSHAa2917 hit; member of HIT (histidine triad) family that contains Ap3A and Ap4A hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PSHAb0502 fadD; acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSHAa0908 putative acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1586 atoB; acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1454 atoB; acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa0897 putative nonspecific lipid-transfer protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSHAa1208 adk; adenylate kinase(ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PSHAa1200 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PSHAa2288 argG; Argininosuccinate synthase (Citrulline--aspartate ligase) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PSHAa2169 faH; Fumarylacetoacetase (Fumarylacetoacetate hydrolase) (Beta-diketonase)(FAA) K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PSHAa0463 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAa1742 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAb0549 putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PSHAa1769 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PSHAb0551 glpK; putative glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PSHAa0190 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PSHAa0166 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSHAa2935 hemB; 5-aminolevulinate dehydratase (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PSHAa2168 melA; 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PSHAa2042 phhB; Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PSHAa2976 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa2977 secreted alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAb0500 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa0666 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PSHAa0345 purH; bifunctional purine biosynthesis protein purH[Includes:IMP cyclohydrolase (Inosinicase) (IMP synthetase) (ATIC);Phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) ] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PSHAa0758 putative pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa0393 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSHAa1617 etfA; electron transfer flavoprotein alpha-subunit (Alpha-ETF) (Electron transfer flavoprotein large subunit) (ETFLS) K03522 fixB; electron transfer flavoprotein alpha subunit
D PSHAa1140 zwf; Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1. 49) (G6PD) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PSHAa0873 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PSHAb0044 blc; outer membrane lipoprotein (lipocalin) K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:pha02048]
D PSHAa2091 hsdR; putative type I restriction-modification system endonuclease; DEAD/DEAH box helicase motif K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PSHAa2093 hsdS; putative type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PSHAa2094 hsdM; putative type I restriction-modification system, M subunit; N-6 Adenine-specific DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PSHAa2712 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSHAa1040 conserved protein of unknown function K19159 yefM; antitoxin YefM
D PSHAa0453 conserved protein of unknown function; putative hipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PSHAa0501 pspC; putative phage shock protein C K03973 pspC; phage shock protein C
D PSHAa2047 pspC; transcriptional activator of the psp operon with PspB, phage shock protein K03973 pspC; phage shock protein C
D PSHAa2048 pspB; regulatory gene for expression of the psp operon with PspC, phage shock protein K03970 pspB; phage shock protein B
D PSHAa2625 conserved protein of unknown function K19092 parE1_3_4; toxin ParE1/3/4
D PSHAb0173 kidB; toxin of the toxin/antitoxin chromosome stabilisation protein K19092 parE1_3_4; toxin ParE1/3/4
D PSHAa2626 conserved protein of unknown function K07746 parD1_3_4; antitoxin ParD1/3/4
D PSHAa0434 putative orphan protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PSHAa2499 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D PSHAa2682 mreB; Rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PSHAa2585 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PSHAa2587 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PSHAa0635 gltX; Glutamyl-tRNA synthetase (Glutamate-tRNA ligase) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PSHAa0723 conserved protein of unknown function(ygfY) K09159 cptB; antitoxin CptB
D PSHAb0099 iscS; Cysteine desulfurase (ThiI) (transpersulfidase) (NifS protein homolog) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa2671 iscS; cysteine desulfurase (tRNA sulfurtransferase; RNA 4-thiouridine sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAa1138 putative enzyme of the cysteine desulfurase family, metallo-beta-lactamase superfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PSHAb0098 putative protein with thiol (cysteine) protease domain K19169 dndB; DNA sulfur modification protein DndB
D PSHAb0097 putative enzyme protein K19170 dndC; DNA sulfur modification protein DndC
D PSHAb0096 putative ABC transporter ATP-binding protein K19171 dndD; DNA sulfur modification protein DndD
D PSHAb0095 conserved protein of unknown function K19172 dndE; DNA sulfur modification protein DndE
D PSHAb0089 conserved protein of unknown function K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF
D PSHAb0090 putative orphan protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG
D PSHAb0091 putative protein with Cell divisionFtsK/SpoIIIE domain K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:pha04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pha04090]
D PSHAb0005 Dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PSHAa2386 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:pha01504]
D PSHAb0350 putative Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D PSHAa1168 putative Chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D PSHAa1935 putative protein mcbG K18555 qnr; fluoroquinolone resistance protein
D PSHAb0013 cusS; sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PSHAb0012 cusR; transcriptional activator of copper resistance (two-component regulatory system with CusS) K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PSHAa1282 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PSHAa1283 phoP; response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PSHAb0323 acrE; putative lipoprotein component of efflux protein (exporter) K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAa2272 conserved protein of unknown function; putative membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PSHAb0324 acrB; putative multidrug efflux pump (RND family) K18138 acrB; multidrug efflux pump
D PSHAa2273 putative acrB/acrD/acrF acriflavin resistance family protein K18138 acrB; multidrug efflux pump
D PSHAb0325 putative outer membrane protein oprM precursor of a metabolite export system K18139 oprM; outer membrane protein, multidrug efflux system
D PSHAb0370 putative lipoprotein component of a efflux transporter K18298 mexE; membrane fusion protein, multidrug efflux system
D PSHAb0371 similar to AcrAB-TolC efflux pump K18299 mexF; multidrug efflux pump
D PSHAb0372 putative lipoprotein, possibly associated with the outermembrane K18300 oprN; outer membrane protein, multidrug efflux system
D PSHAa2592 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D PSHAa0559 putative Secretion protein K18901 bpeE; membrane fusion protein, multidrug efflux system
D PSHAa2958 putative multidrug resistance protein K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pha00537]
D PSHAa2976 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa2977 secreted alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAb0500 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PSHAa2910 putative periplasmic dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pha03100]
D PSHAatRNA104 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSHAatRNA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSHAatRNA8 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSHAatRNA27 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSHAatRNA46 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA43 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA24 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA14 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA16 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA15 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA17 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSHAatRNA82 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSHAatRNA85 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSHAatRNA83 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSHAatRNA84 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSHAatRNA50 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA52 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA53 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA54 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA55 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA51 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA59 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA58 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA57 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA56 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA60 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSHAatRNA62 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PSHAatRNA67 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PSHAatRNA100 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSHAatRNA98 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSHAatRNA102 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSHAatRNA95 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSHAatRNA28 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA34 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA29 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA31 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA32 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA30 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSHAatRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA66 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA10 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA61 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA64 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA41 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSHAatRNA47 tRNA-His K14226 tRNA-His; tRNA His
D PSHAatRNA103 tRNA-His K14226 tRNA-His; tRNA His
D PSHAatRNA1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PSHAatRNA7 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PSHAatRNA25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA44 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA101 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA94 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA99 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA97 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA63 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA68 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSHAatRNA74 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA76 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA70 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA73 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA71 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA69 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA72 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA75 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSHAatRNA9 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA93 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA96 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA26 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA3 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA4 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA5 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSHAatRNA18 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PSHAatRNA22 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PSHAatRNA20 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PSHAatRNA45 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSHAatRNA49 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSHAatRNA48 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSHAatRNA38 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSHAatRNA77 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA105 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA79 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA35 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA78 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA106 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA13 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSHAatRNA42 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSHAatRNA19 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSHAatRNA39 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSHAatRNA21 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSHAatRNA23 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PSHAatRNA6 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PSHAatRNA40 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PSHAatRNA80 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PSHAatRNA81 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PSHAatRNA86 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA89 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA91 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA87 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA92 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA90 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA88 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA36 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAatRNA37 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSHAa_rRNA16s6 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s7 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s1 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s3 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s4 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s5 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s9 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s8 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA16s2 16s K01977 16SrRNA; 16S ribosomal RNA
D PSHAa_rRNA23s9 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s8 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s5 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s3 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s4 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s2 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s6 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s1 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA23s7 23s K01980 23SrRNA; 23S ribosomal RNA
D PSHAa_rRNA5s5 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s3 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s9 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s10 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s7 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s2 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s4 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s8 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s1 5s K01985 5SrRNA; 5S ribosomal RNA
D PSHAa_rRNA5s6 5s K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PSHAa1707 conserved protein of unknown function; putative dehydrogenase with soluble quinoprotein glucose dehydrogenase domain K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PSHAa2139 putative aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D PSHAb0365 putative aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D PSHAb0182 gapB; glyceraldehyde 3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D PSHAa1410 fadH; 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PSHAb0123 putative Zinc-binding NADPH:quinone reductase/dehydrogenase/oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D PSHAa0888 putative acyl-CoA dehydrogenase family protein K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D PSHAa0885 putative acyl-CoA dehydrogenase family protein K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D PSHAa1619 etfdH; Electron transfer flavoprotein-ubiquinone oxidoreductase(ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D PSHAa1308 putative quinone oxidoreductase, NADPH-dependent K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PSHAb0018 putative Zn-dependent enzyme K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PSHAb0266 ahpF; Alkyl hydroperoxide reductase subunit F (Alkyl hydroperoxide reductase F52A protein) K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D PSHAa1828 putative cytochrome c (partial) K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D PSHAa1865 putative cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D PSHAa1243 mrsAB; putative peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PSHAa1583 msrAA; Peptide methionine sulfoxide reductase msrA 2 (Protein-methionine-S-oxide reductase 2) (Peptide Met(O) reductase 2) K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PSHAa2274 msrAB; protein-methionine-S-oxide reductase (Peptide Met(O) reductase) K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PSHAa1444 msrC; probable secreted protein-methione-sulfoxide reductase with methionine-S-sulfoxide and methionine-R-sulfoxide reductase activity; putative signal peptide MSYQGLIYLSSVAILFSASSVA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D PSHAa1087 msrB; Peptide methionine-R-sulfoxide reductase, MsrB protein (PilB protein) K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PSHAa2192 putative Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PSHAb0103 putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PSHAa1480 Cytochrome b561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D PSHAa2702 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PSHAa1122 bcpA; putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PSHAa1209 tpx; putative periplasmic thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PSHAb0265 ahpC; Alkyl hydroperoxide reductase subunit C (Alkyl hydroperoxide reductase protein C22) (SCRP-23) (Sulfate starvation-induced protein 8)(SSI8) K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PSHAa2202 osmC; osmotically inducible protein C K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PSHAb0180 osmC; putative organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PSHAa2660 conserved protein of unknown function K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PSHAa1753 conserved protein of unknown function K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PSHAa2517 putative pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PSHAa2880 hmp; two-domains flavohemoprotein: one is a heme-containing oxygen binding domain in the N-terminal region and the other is an FAD-containing reductase domain found in the C-terminal region K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PSHAb0083 fpr; Ferredoxin--NADP reductase (FNR) (Flavodoxin reductase) (FLXR) (FLDR) (Methyl viologen resistance protein A) (DA1) K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PSHAa1133 putative arsenate reductase with thioredoxin-like domain K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PSHAa0688 pcm; L-isoaspartate protein carboxylmethyltransferase type II K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PSHAb0458 putative cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PSHAa2996 putative carbohydrate o-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PSHAa1042 cutE; apolipoprotein N-acyltransferase copper homeostasis protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PSHAa1721 aat; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PSHAa1497 putative Transglutaminase family protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D PSHAa1722 putative aminoacyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D PSHAa0394 conserved protein of unknown function K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PSHAa1321 conserved protein of unknown function K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PSHAa0748 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PSHAa2235 apbE; putative lipoprotein involved in thiamin biosynthesis via the alternative pyrimidine biosynthetic pathway K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PSHAb0558 conserved protein of unknown function with periplasmic binding protein II-like domain K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PSHAa2595 glnE; adenylyl transferase for glutamine synthetase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PSHAa1277 conserved protein of unknown function K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D PSHAb0368 putative GGDEF domain membrane protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D PSHAa0182 conserved protein of unknown function K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PSHAa1485 putative Serine/threonine protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1]
D PSHAa1821 putative isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D PSHAa1307 putative isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D PSHAb0402 putative protein with predicted thioesterase domain K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PSHAa0188 conserved protein of unknown function (could be a thioesterase) K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PSHAa0477 conserved protein of unknown function; putative thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PSHAa2391 putative thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PSHAb0444 conserved protein of unknown function K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PSHAa1779 putative Capsular polysaccharide biosynthesis, capC K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D PSHAa1294 trpH; conserved protein of unknown function; putative conserved enzyme (phosphoesterase domain) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PSHAa0973 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PSHAa1150 CheB; Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase) K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D PSHAa2265 conserved protein of unknown function; putative metal-dependent phosphohydrolase domain K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D PSHAa2879 endA; Endonuclease I Precursor (Endo I) K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D PSHAa1800 putative metallo-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PSHAa0659 putative hydrolase with metallo-dependent hydrolase domain K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PSHAa2933 tatD; putative metal-dependent hydrolase, possibly deoxyribonuclease, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PSHAa1636 putative hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D PSHAa2164 bcsZ; Endoglucanase precursor (Endo-1,4-beta-glucanase) (Cellulase) (Carboxymethylcellulase) (CMCase) K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D PSHAa1354 putative alpha-amylase K21575 susA; neopullulanase [EC:3.2.1.135]
D PSHAa0023 def; N-terminal methionine peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PSHAa2676 putative hydrolase, carbon-nitrogen family K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PSHAa2410 putative endoribonuclease with L-PSP Domain K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PSHAa2261 conserved protein of unknown function with CYTH domain K18446 ygiF; triphosphatase [EC:3.6.1.25]
D PSHAa1813 conserved protein of unknown function; putative Maf/Ham1 domain K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D PSHAa0965 putative ATPase family protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PSHAa1500 moxR; MoxR protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PSHAa0887 conserved protein of unknown function; putative nonspecific lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-]
D PSHAa0884 conserved protein of unknown function K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-]
D PSHAa0886 conserved protein of unknown function K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-]
D PSHAa1748 alyll; putative chondroitin AC/alginate lyase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26]
D PSHAa2134 putative AMP-binding enzyme K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D PSHAa2299 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (Murein peptide ligase) K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PSHAa2177 putative DNA ligase, ATP-dependent K26441 lig; DNA ligase [EC:6.5.1.1]
D PSHAa1102 rsxD; Electron transport complex protein rnfD. K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PSHAa1103 rsxC; Electron transport complex protein rnfC. K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D PSHAa1104 rsxB; Electron transport complex protein rnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PSHAa2241 nqrA; Na(+)-translocating NADH-quinone reductase subunit A (Na(+)-translocating NADH-quinone reductase subunit alpha) (Na(+)-translocating NQR subunit A) (Na(+)-NQR subunit A) (NQR complex subunit A) K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D PSHAa2240 nqrB; Na(+)-translocating NADH-quinone reductase subunit B (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D PSHAa2239 nqrC; Na(+)-translocating NADH-quinone reductase subunit C (Na(+)-translocating NQR subunit C) (Na(+)-NQR subunit C) (NQR complex subunit C) (NQR-1 subunit C) K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PSHAa2238 nqrD; Na(+)-translocating NADH-quinone reductase subunit D (Na(+)-translocating NQR subunit) (Na(+)-NQR subunit D) (NQR complex subunit D) K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D PSHAa2237 nqrE; Na(+)-translocating NADH-quinone reductase subunit E (Na(+)-translocating NQR subunit E) (Na(+)-NQR subunit E) (NQR complex subunit E) K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D PSHAa2236 nrqF; Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-translocating NADH-quinone reductase subunit beta) (Na(+)-translocating NQR subunit F) (Na(+)-NQR subunit F) (NQR complex subunit F) K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D PSHAa1847 Cation transport ATPase, E1-E2 family K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D PSHAa0607 sfsA; transcriptional regulator of maltose metabolism K06206 sfsA; sugar fermentation stimulation protein A
D PSHAa0977 putative oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PSHAa0976 putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PSHAa0975 conserved protein of unknown function K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PSHAa2666 fdx; [2Fe-2S] ferredoxin, electron carrier protein, involved in assembly of Fe-S clusters K04755 fdx; ferredoxin, 2Fe-2S
D PSHAb0413 putative ferredoxin K05524 fdxA; ferredoxin
D PSHAa1416 putative ferredoxin K11107 yfaE; ferredoxin
D PSHAa1101 rsxG; Electron transport complex protein rnfG. K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PSHAa1100 rsxE; Electron transport complex protein rnfE. K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PSHAa1105 rsxA; Electron transport complex protein rnfA, inner membrane protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PSHAa3020 mioC; FMN-binding protein, required for biotin synthase activity; insertion of sulfur into desthiobiotin K06205 mioC; MioC protein
D PSHAa0513 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D PSHAa2670 iscU; Fe-S assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PSHAb0380 putative orphan protein K15536 cybC; soluble cytochrome b562
D PSHAa1639 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D PSHAa1618 etfB; Electron transfer flavoprotein beta-subunit (Beta-ETF) (Electron transfer flavoprotein small subunit) (ETFSS) K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PSHAa1068 cysZ; required for sulfate transport K06203 cysZ; CysZ protein
D PSHAb0303 putative S-C lyase K08234 yaeR; glyoxylase I family protein
D PSHAa2604 conserved protein of unknown function; putative enzyme with PLP-binding domain K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PSHAa1427 conserved protein of unknown function K08992 lapA; lipopolysaccharide assembly protein A
D PSHAa1428 putative N-acetylglucosaminyl-group transferase K19804 lapB; lipopolysaccharide assembly protein B
D PSHAa2163 putative cyclic di-GMP binding protein, cellulose synthase regulator (BcsB) K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D PSHAa0100 hemY; putative HemY (Uncharacterized enzyme of heme biosynthesis); by synteny may be involved in heme biosynthesis or transport K02498 hemY; HemY protein
D PSHAa2928 ubiB; 2-octaprenylphenol hydroxylase; ubiquinone biosynthesis K03688 ubiB; ubiquinone biosynthesis protein
D PSHAa2927 putative protein with ubiquinone carrier domain, SCP-like K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D PSHAa2763 conserved protein of unknown function K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D PSHAa0700 putative p-aminobenzoyl-glutamate transport protein (AbgT family) K12942 abgT; aminobenzoyl-glutamate transport protein
D PSHAa0989 putative transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D PSHAa2886 putative oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PSHAb0104 putative membrane DoxD-like family protein K15977 K15977; putative oxidoreductase
D PSHAa0096 putative phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
D PSHAa2613 yfiQ; putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PSHAa2978 cspE; RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA K03704 cspA; cold shock protein
D PSHAa2979 cspE; RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA K03704 cspA; cold shock protein
D PSHAa2980 cspE; Cold shock-like protein cspE, RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA K03704 cspA; cold shock protein
D PSHAb0078 cspX; Cold shock protein K03704 cspA; cold shock protein
D PSHAb0384 cspX; Cold shock protein K03704 cspA; cold shock protein
D PSHAb0386 cspX; Cold shock protein K03704 cspA; cold shock protein
D PSHAb0387 cspX; Cold shock protein K03704 cspA; cold shock protein
D PSHAa1184 cspC; cold shock protein, transcription antiterminator, affects expression of rpoS and uspA K03704 cspA; cold shock protein
D PSHAa1726 cspD; nucleic acid-binding domain, cold-shock RNA chaperone K03704 cspA; cold shock protein
D PSHAa2900 rsd; stationary-phase regulator of sigma D, the major sigma subunit of RNA polymerase K07740 rsd; regulator of sigma D
D PSHAa2258 glnK; Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D PSHAa2854 yhgF; conserved protein with nucleic acid-binding protein-like domain (Transcriptional accessory protein) K06959 tex; protein Tex
C 99974 Translation
D PSHAa0443 putative RNAse with metallo-beta-lactamase-like domain K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D PSHAa0478 putative heat shock protein K03668 hslJ; heat shock protein HslJ
D PSHAa1725 clpS; modulator of ClpA substrate specificity K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PSHAa2063 tig; peptidyl-prolyl cis/trans isomerase (trigger factor), molecular chaperone involved in cell division K03545 tig; trigger factor
D PSHAa1760 ureE; putative urease accessory chaperone protein K03187 ureE; urease accessory protein
D PSHAa1761 ureF; putative urease accessory protein UreF K03188 ureF; urease accessory protein
D PSHAa1762 ureG; urease accessory protein K03189 ureG; urease accessory protein
D PSHAa1756 putative urease accessory protein UreD K03190 ureD; urease accessory protein
D PSHAa1763 conserved protein of unknown function; putative urease accessory protein (ureJ) K03192 ureJ; urease accessory protein
D PSHAa0841 smpB; SsrA-binding protein (small protein B) K03664 smpB; SsrA-binding protein
D PSHAa0130 yifB; putative regulator K07391 comM; magnesium chelatase family protein
D PSHAa2309 putative prolyl 4-hydroxylase, alpha subunit domain K07394 K07394; SM-20-related protein
D PSHAb0519 conserved protein of unknown function K07396 K07396; putative protein-disulfide isomerase
D PSHAa0198 conserved protein of unknown function K07397 yhfA; putative redox protein
D PSHAa2860 conserved protein of unknown function K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D PSHAb0441 conserved protein of unknown function K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PSHAb0468 xni; putative exonuclease IX, 5'-3' exonuclease K01146 xni; protein Xni
D PSHAa2643 radC; associated with replication fork DNA repair protein K03630 radC; DNA repair protein RadC
D PSHAb0004 DNA recombination protein rmuC K09760 rmuC; DNA recombination protein RmuC
D PSHAa1095 putative orphan protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PSHAa2523 conserved protein of unknown function K07460 yraN; putative endonuclease
D PSHAa0845 conserved protein of unknown function K07461 K07461; putative endonuclease
D PSHAa0025 smf; conserved protein of unknown function; Smf protein K04096 smf; DNA processing protein
D PSHAa1714 rarA; putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain K07478 ycaJ; putative ATPase
D PSHAa0027 putative DNA topoisomerase; C4 zinc finger domain protein K07479 yrdD; putative DNA topoisomerase
D PSHAa0410 putative transposase (IS66) K07484 K07484; transposase
D PSHAa0409 putative orphan protein; putative transposase (IS66 family element,Orf2-like) K07484 K07484; transposase
D PSHAa0676 putative transposase (IS492) K07486 K07486; transposase
D PSHAb0026 putative transposase IS200-like K07491 rayT; REP-associated tyrosine transposase
D PSHAa0581 putative transposase K07491 rayT; REP-associated tyrosine transposase
D PSHAa2471 putative orphan protein K07491 rayT; REP-associated tyrosine transposase
D PSHAb0027 Peyer's patch-specific virulence factor GipA (transposase) K07496 K07496; putative transposase
D PSHAa0341 putative transposase K07496 K07496; putative transposase
D PSHAa0582 putative transposase (IS605) K07496 K07496; putative transposase
D PSHAb0076 conserved protein of unknown function; putative transposase DNA-binding domain K07496 K07496; putative transposase
D PSHAa0405 putative orphan protein; putative transposase (partial) K07497 K07497; putative transposase
D PSHAa0402 putative orphan protein; putative ISSod2, transposase OrfA (partial) K07497 K07497; putative transposase
D PSHAa0403 putative orphan protein K07497 K07497; putative transposase
D PSHAa0408 putative orphan protein; putative transposase K07497 K07497; putative transposase
D PSHAa1523 conserved protein of unknown function K07497 K07497; putative transposase
D PSHAa0421 conserved protein of unknown function; putative phage integrase K14059 int; integrase
D PSHAa2110 putative phage integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D PSHAa0500 pspA; putative negative regulatory gene for the psp operon, phage shock protein A K03969 pspA; phage shock protein A
D PSHAa2049 pspA; negative regulatory gene for the psp opreon, phage shock protein K03969 pspA; phage shock protein A
D PSHAa2836 conserved protein of unknown function K03972 pspE; phage shock protein E
D PSHAa1202 conserved protein of unknown function likely to be involved in DNA repair K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PSHAa1436 Choline-glycine betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D PSHAa2166 putative proton-dependent peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PSHAa0314 putative inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PSHAa0833 putP; major sodium/proline symporter (SSS family) K03307 TC.SSS; solute:Na+ symporter, SSS family
D PSHAa1768 putative sodium/hexose cotransport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D PSHAb0151 putative sodium-dependent carbohydrate permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D PSHAb0160 conserved protein of unknown function; putative integral inner membrane sodium-dependent carbohydrate transporter protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D PSHAa0859 putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PSHAa1286 putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PSHAa1252 putative Sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PSHAa1898 dagA; Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PSHAa1913 putative sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PSHAb0545 yaaJ; putative amino acid permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PSHAb0207 putative nucleoside transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PSHAb0079 nupX; putative Na+ dependent nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D PSHAa0857 conserved protein of unknown function; putative SpoOM-related protein K06377 spo0M; sporulation-control protein
D PSHAa1212 conserved protein of unknown function K06415 spoVR; stage V sporulation protein R
D PSHAa0365 conserved protein of unknown function; putative protease K22719 envC; murein hydrolase activator
C 99993 Cell motility
D PSHAa1325 conserved protein of unknown function K07337 K07337; penicillin-binding protein activator
D PSHAa1979 syd; Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D PSHAa0389 putative ampicillin resistance protein K03807 ampE; AmpE protein
D PSHAa1679 proQ; putative post-translational activator of ProP expression K03607 proQ; ProP effector
D PSHAa1851 uspE; putative universal stress protein K14055 uspE; universal stress protein E
D PSHAa0167 typA; GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A); involved in LPS core synthesis K06207 typA; GTP-binding protein
D PSHAb0451 putative transcriptional activator K07167 chrR; putative transcriptional regulator
D PSHAa1045 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PSHAa2622 PhoH-like protein K07175 phoH2; PhoH-like ATPase
D PSHAa1214 conserved protein of unknown function, nucleotide triphosphate hydrolase domain K07180 prkA; serine protein kinase
D PSHAa1434 conserved protein of unknown function K07182 K07182; CBS domain-containing protein
D PSHAa0588 conserved protein of unknown function; putative inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) K07182 K07182; CBS domain-containing protein
D PSHAa2262 conserved protein of unknown function K07184 ygiM; SH3 domain protein
D PSHAa0660 conserved protein of unknown function; putative smp protein K07186 smp; membrane protein
D PSHAa2277 yajQ; putative low abundance protein; binds tRNA, ATP and GTP; 3D known K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PSHAa1715 lolA; putative periplasmic chaperone effects translocation of lipoproteins from inner membrane to outer membrane K03634 lolA; outer membrane lipoprotein carrier protein
D PSHAa1056 putative Outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D PSHAa0831 vacJ; lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PSHAa1324 conserved protein of unknown function; putative secreted protein, conserved in gamma-proteobacteria K06077 slyB; outer membrane lipoprotein SlyB
D PSHAa2027 skp; periplasmic molecular chaperone for outer membrane proteins K06142 hlpA; outer membrane protein
D PSHAa0690 putative lipoprotein NlpD precursor K06194 nlpD; lipoprotein NlpD
D PSHAa1002 nlpI; lipoprotein probably involved in cell division after interaction with a protease K05803 nlpI; lipoprotein NlpI
D PSHAa2155 putative protein W (OmpW) family K07275 ompW; outer membrane protein
D PSHAa0397 putative orphan protein K07283 ydiY; putative salt-induced outer membrane protein
D PSHAa0719 conserved protein of unknown function K07283 ydiY; putative salt-induced outer membrane protein
D PSHAa2246 putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D PSHAa2821 asmA; putative AsmA protein K07289 asmA; AsmA protein
D PSHAb0271 putative membrane protein K07340 ybbJ; inner membrane protein
D PSHAa2826 putative substate-binding protein involved in drug resistance K02005 ABC.CD.TX; HlyD family secretion protein
D PSHAa1279 conserved protein of unknown function; putative integral membrane transport protein K11744 tqsA; AI-2 transport protein TqsA
D PSHAa0826 ccmE; cytochrome c-type biogenesis protein ccmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PSHAa0829 ccmH; cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PSHAb0139 putative transcriptional regulator, HTH domain K15539 rodZ; cytoskeleton protein RodZ
D PSHAa1077 aaeX; conserved protein of unknown function K21695 aaeX; protein AaeX
C 99994 Others
D PSHAa0312 phoU; transcriptional repressor for high-affinity phosphate uptake K02039 phoU; phosphate transport system protein
D PSHAb0282 putative Bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D PSHAa2937 mdoG; periplasmic glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D PSHAa0262 cutA; periplasmic divalent cation tolerance protein (C-type cytochrome biogenesis protein) K03926 cutA; periplasmic divalent cation tolerance protein
D PSHAa2636 apaG; conserved protein (part of complex ksgA operon) K06195 apaG; ApaG protein
D PSHAa0095 cyaY; putative CyaY, involved in iron scavenging and/or transfer to heme K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D PSHAb0073 hmuS; putative hemin transport protein hmuS K07225 hmuS; putative hemin transport protein
D PSHAb0010 copB; Copper resistance protein B [Precursor] (CPx-type copper ATPase) K07233 pcoB; copper resistance protein B
D PSHAa2881 putative integral inner membrane permease K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PSHAa2071 cvpA; membrane protein required for colicin V production K03558 cvpA; membrane protein required for colicin V production
D PSHAa1275 conserved protein of unknown function; putative Bax protein K03796 bax; Bax protein
D PSHAb0353 pqiB; putative paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D PSHAa0858 putative acyltransferase K02348 elaA; ElaA protein
D PSHAa0325 osmY; putative hyperosmotically inducible periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D PSHAa0030 putative hemoglobin-like oxygen-binding protein K06886 glbN; hemoglobin
D PSHAa0458 putative protozoan/cyanobacterial globin family protein K06886 glbN; hemoglobin
D PSHAa2217 conserved protein of unknown function; putative globin-like family K06886 glbN; hemoglobin
D PSHAa2009 conserved protein of unknown function K07001 K07001; NTE family protein
D PSHAa2251 putative HesB/YadR/YfhF family protein K15724 erpA; iron-sulfur cluster insertion protein
D PSHAa2519 putative ribonuclease protein K07058 K07058; membrane protein
D PSHAa0171 rbn; tRNA processing exoribonuclease BN; required for maturation of tRNA encoded by bacteriophages; dimer K07058 K07058; membrane protein
D PSHAa0261 putative FxsA protein (Suppressor of F exclusion of phage T7) K07113 fxsA; UPF0716 protein FxsA
D PSHAa1655 putative SufE protein K02426 sufE; cysteine desulfuration protein SufE
D PSHAa1433 putative rhodanese-related protein K07146 K07146; UPF0176 protein
D PSHAa1691 hflD; conserved protein of unknown function K07153 hflD; high frequency lysogenization protein
D PSHAa2449 conserved protein of unknown function; putative glyoxalase/bleomycin resistance protein/dioxygenase domain K04750 phnB; PhnB protein
D PSHAa2903 slyX; conserved protein of unknown function K03745 slyX; SlyX protein
D PSHAa0026 smg; conserved protein of unknown function K03747 smg; Smg protein
D PSHAa0331 conserved protein of unknown function; putative CreA protein K05805 creA; CreA protein
D PSHAa2072 dedD; conserved protein of unknown function K03749 dedD; DedD protein
D PSHAa2713 conserved protein of unknown function; putative DamX-related protein K03112 damX; DamX protein
D PSHAb0354 putative protein with paraquat-inducible domain K03808 pqiA; paraquat-inducible protein A
D PSHAa2964 conserved protein of unknown function; putative stress protein K08981 K08981; putative membrane protein
D PSHAa1265 conserved protein of unknown function; putative inner membrane protein K08984 yjdF; putative membrane protein
D PSHAa2045 conserved protein of unknown function; putative membrane protein K08990 ycjF; putative membrane protein
D PSHAa1158 conserved protein of unknown function K09858 K09858; SEC-C motif domain protein
D PSHAa0299 conserved protein of unknown function; putative lipoprotein precursor K09914 K09914; putative lipoprotein
D PSHAa0300 conserved protein of unknown function; putative PhnA protein(yjdM) K06193 phnA; protein PhnA
D PSHAb0032 putative membrane protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D PSHAb0204 ankB; putative AnkB protein involved in protection against oxygen K06867 K06867; uncharacterized protein
D PSHAa2046 conserved protein of unknown function, with nucleotide triphosphate hydrolase domain K06918 K06918; uncharacterized protein
D PSHAa2617 conserved protein of unknown function K06938 K06938; uncharacterized protein
D PSHAa1070 conserved protein of unknown function K06940 K06940; uncharacterized protein
D PSHAa1241 conserved protein of unknown function K06940 K06940; uncharacterized protein
D PSHAa1887 putative orphan protein K06940 K06940; uncharacterized protein
D PSHAb0120 conserved protein of unknown function K06940 K06940; uncharacterized protein
D PSHAa1148 putative two-component regulator with metal-dependent phosphohydrolase, HD region K06950 K06950; uncharacterized protein
D PSHAb0456 conserved protein of unknown function K06954 K06954; uncharacterized protein
D PSHAa2453 putative sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein
D PSHAa2576 conserved protein of unknown function K06987 K06987; uncharacterized protein
D PSHAa0177 conserved protein of unknown function K06987 K06987; uncharacterized protein
D PSHAa0570 conserved protein of unknown function; putative glyoxalase domain K06991 K06991; uncharacterized protein
D PSHAb0041 putative enzyme protein K06996 K06996; uncharacterized protein
D PSHAa0736 conserved protein of unknown function K06996 K06996; uncharacterized protein
D PSHAa2588 conserved protein of unknown function; putative enzyme with alpha/beta-hydrolase-like domain K07000 K07000; uncharacterized protein
D PSHAa1671 putative predicted exporter of the RND superfamily K07003 K07003; uncharacterized protein
D PSHAa2936 conserved protein of unknown function; putative periplasmic calcium binding protein K07004 K07004; uncharacterized protein
D PSHAa1819 conserved protein of unknown function K07014 K07014; uncharacterized protein
D PSHAa2908 putative enzyme with alpha/beta-hydrolase domain K07019 K07019; uncharacterized protein
D PSHAa1065 conserved protein of unknown function K07020 K07020; uncharacterized protein
D PSHAa0898 putative acyl dehydratase K07068 K07068; uncharacterized protein
D PSHAa2904 putative nucleic-acid-binding protein K07070 K07070; uncharacterized protein
D PSHAa1278 putative epimerase K07071 K07071; uncharacterized protein
D PSHAa1751 conserved protein of unknown function K07078 K07078; uncharacterized protein
D PSHAa1260 putative permease K07086 K07086; uncharacterized protein
D PSHAa1992 conserved protein of unknown functions similar to YfcA K07090 K07090; uncharacterized protein
D PSHAa1752 conserved protein of unknown function K07090 K07090; uncharacterized protein
D PSHAa2083 putative orphan protein; putative membrane protein K07090 K07090; uncharacterized protein
D PSHAa0747 conserved protein of unknown function; putative membrane protein K07090 K07090; uncharacterized protein
D PSHAa1469 conserved protein of unknown function K07090 K07090; uncharacterized protein
D PSHAa0609 hpt; putative hypoxanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PSHAa1481 conserved protein of unknown function K07112 K07112; uncharacterized protein
D PSHAa2001 putative Predicted transporter component K07112 K07112; uncharacterized protein
D PSHAa2000 conserved protein of unknown function K07112 K07112; uncharacterized protein
D PSHAa2522 putative lipoprotein K07121 K07121; uncharacterized protein
D PSHAb0366 ybeQ; putative secreted protein with protein prenylyltransferase domain K07126 K07126; uncharacterized protein
D PSHAa1562 putative membrane protein K07136 K07136; uncharacterized protein
D PSHAb0412 putative uncharacterized dehydrogenase K07137 K07137; uncharacterized protein
D PSHAb0435 putative unknown integral membrane protein K07148 K07148; uncharacterized protein
D PSHAb0449 conserved protein of unknown function K07157 K07157; uncharacterized protein
D PSHAa3023 conserved protein of unknown function K08998 K08998; uncharacterized protein
D PSHAa0351 conserved protein of unknown function K09117 K09117; uncharacterized protein
D PSHAa1021 conserved protein of unknown function K09158 K09158; uncharacterized protein
D PSHAb0515 conserved protein of unknown function; putative YcgN protein K09160 K09160; uncharacterized protein
D PSHAa2965 putative unknown membrane associated protein K09167 K09167; uncharacterized protein
D PSHAb0457 conserved protein of unknown function K09701 K09701; uncharacterized protein
D PSHAa2113 putative orphan protein K09749 K09749; uncharacterized protein
D PSHAa2795 conserved protein of unknown function K09749 K09749; uncharacterized protein
D PSHAb0045 conserved protein of unknown function K09768 K09768; uncharacterized protein
D PSHAa1285 conserved protein of unknown function K09780 K09780; uncharacterized protein
D PSHAa0107 conserved protein of unknown function; putative membrane protein K09781 K09781; uncharacterized protein
D PSHAa1213 conserved protein of unknown function K09786 K09786; uncharacterized protein
D PSHAa1659 conserved protein of unknown function K09791 K09791; uncharacterized protein
D PSHAa1849 conserved protein of unknown function; putative membrane protein K09792 K09792; uncharacterized protein
D PSHAa0191 conserved protein of unknown function K09794 K09794; uncharacterized protein
D PSHAa2612 conserved protein of unknown function K09797 K09797; uncharacterized protein
D PSHAa0363 conserved protein of unknown function; putative signal peptide K09798 K09798; uncharacterized protein
D PSHAa0843 conserved protein of unknown function (yfjF); highly conserved in gamma-proteobacteria K09801 K09801; uncharacterized protein
D PSHAa2111 putative orphan protein K09803 K09803; uncharacterized protein
D PSHAa1564 conserved protein of unknown function; putative signal peptide K09807 K09807; uncharacterized protein
D PSHAa2234 putative membrane protein K05952 K05952; uncharacterized protein
D PSHAa1431 conserved protein of unknown function K00243 K00243; uncharacterized protein
D PSHAb0352 putative membrane protein K09857 K09857; uncharacterized protein
D PSHAa1327 putative adenine DNA methylase conserved in bacteria; similar to YhdJ in E. coli; AdoMet site K09859 K09859; uncharacterized protein
D PSHAa2558 conserved protein of unknown function K09861 K09861; uncharacterized protein
D PSHAa0377 conserved protein of unknown function K09862 K09862; uncharacterized protein
D PSHAa2305 putative orphan protein K09891 K09891; uncharacterized protein
D PSHAa2751 conserved protein of unknown function K09894 K09894; uncharacterized protein
D PSHAa0561 conserved protein of unknown function K09895 K09895; uncharacterized protein
D PSHAa2569 conserved protein of unknown function; putative transcriptional regulator with pssR K09897 K09897; uncharacterized protein
D PSHAa2909 conserved protein of unknown function; putative UPF0270 family K09898 K09898; uncharacterized protein
D PSHAa1336 conserved protein of unknown function K09899 K09899; uncharacterized protein
D PSHAa0718 conserved protein of unknown function K09901 K09901; uncharacterized protein
D PSHAb0508 conserved protein of unknown function; putative YcgL protein K09902 K09902; uncharacterized protein
D PSHAa1818 conserved protein of unknown function K09904 K09904; uncharacterized protein
D PSHAa2535 conserved protein of unknown function K09908 K09908; uncharacterized protein
D PSHAa2916 putative membrane protein K09909 K09909; uncharacterized protein
D PSHAa0124 conserved protein of unknown function (similar to E. coli YacL) K09910 K09910; uncharacterized protein
D PSHAa0284 conserved protein of unknown function; putative nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein
D PSHAa0076 conserved protein of unknown function similar to YceH of E. coli K09915 K09915; uncharacterized protein
D PSHAa1896 conserved protein of unknown function K09916 K09916; uncharacterized protein
D PSHAa0834 putative DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS K09918 K09918; uncharacterized protein
D PSHAa0050 conserved protein of unknown function K09919 K09919; uncharacterized protein
D PSHAa2590 conserved protein of unknown function K09920 K09920; uncharacterized protein
D PSHAa0091 conserved protein of unknown function conserved in bacteria K09921 K09921; uncharacterized protein
D PSHAa1846 conserved protein of unknown function; putative signal peptide K09926 K09926; uncharacterized protein
D PSHAa1663 putative membrane protein K09928 K09928; uncharacterized protein
D PSHAa1198 conserved protein of unknown function K09929 K09929; uncharacterized protein
D PSHAa1197 conserved protein of unknown function K09930 K09930; uncharacterized protein
D PSHAa1906 conserved protein of unknown function K09938 K09938; uncharacterized protein
D PSHAa2970 conserved protein of unknown function; putative membrane-associated protein K09939 K09939; uncharacterized protein
D PSHAa0070 conserved protein of unknown function; putative inner membrane protein K09940 K09940; uncharacterized protein
D PSHAa2326 conserved protein of unknown function K09941 K09941; uncharacterized protein
D PSHAa0449 conserved protein of unknown function K09950 K09950; uncharacterized protein
D PSHAa0855 conserved protein of unknown function K09954 K09954; uncharacterized protein
D PSHAb0047 conserved protein of unknown function K09964 K09964; uncharacterized protein
D PSHAa2777 conserved protein of unknown function K09973 K09973; uncharacterized protein
D PSHAa2327 conserved protein of unknown function K09978 K09978; uncharacterized protein
D PSHAa0041 conserved protein of unknown function; similar to E. coli YjfI K09980 K09980; uncharacterized protein
D PSHAa2754 conserved protein of unknown function K09986 K09986; uncharacterized protein
D PSHAa0678 conserved protein of unknown function K09989 K09989; uncharacterized protein
D PSHAa0313 conserved protein of unknown function K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 27, 2024