+D GENES KO #

  KEGG Orthology (KO) - Rickettsia bellii OSU 85-389

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:rbo00010] D A1I_01250 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A1I_06505 Pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A1I_06500 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A1I_06305 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00020 Citrate cycle (TCA cycle) [PATH:rbo00020] D A1I_00225 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A1I_07445 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D A1I_06360 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A1I_01830 kgd; alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D A1I_01835 dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_01110 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A1I_01105 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A1I_01460 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A1I_07725 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A1I_01440 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A1I_01445 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A1I_02010 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A1I_04320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A1I_06505 Pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A1I_06500 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A1I_06305 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:rbo00030] D A1I_06400 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D A1I_00860 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] C 00040 Pentose and glucuronate interconversions D A1I_07570 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00051 Fructose and mannose metabolism [PATH:rbo00051] D A1I_05005 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A1I_06715 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D A1I_06400 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism D A1I_04640 Putative nucleoside-diphosphate sugar epimerase CapD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] C 00053 Ascorbate and aldarate metabolism D A1I_07570 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:rbo00500] D A1I_06960 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rbo00520] D A1I_03390 Putative chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D A1I_03235 UDP-N-acetylglucosamine pyrophosphorylase K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] D A1I_03685 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A1I_03845 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A1I_04635 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D A1I_07570 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A1I_04640 Putative nucleoside-diphosphate sugar epimerase CapD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] D A1I_05005 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A1I_06715 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:rbo00620] D A1I_06505 Pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A1I_06500 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A1I_06305 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_01125 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A1I_01120 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D A1I_02555 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D A1I_04320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A1I_02010 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A1I_01250 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rbo00630] D A1I_04320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A1I_00225 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A1I_07445 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A1I_07605 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D A1I_05330 Acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D A1I_05340 Propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D A1I_04475 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A1I_00320 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:rbo00640] D A1I_01125 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A1I_01120 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_05330 Acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D A1I_05340 Propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D A1I_01105 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A1I_01110 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:rbo00650] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A1I_07005 Poly(3-hydroxyalkanoate) synthetase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D A1I_07210 Poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D A1I_02905 Poly-beta-hydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D A1I_07605 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D A1I_01460 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A1I_07725 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A1I_01440 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A1I_01445 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A1I_06100 Succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A1I_03610 Succinyl-CoA:3-ketoacid-coenzyme A transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D A1I_03605 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D A1I_07695 Oxidoreductase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] C 00660 C5-Branched dibasic acid metabolism D A1I_01105 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A1I_01110 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:rbo00562] D A1I_03800 Extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:rbo00190] D A1I_05770 NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D A1I_05775 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D A1I_05780 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D A1I_05790 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D A1I_05800 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D A1I_01365 NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D A1I_07430 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D A1I_07425 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D A1I_07420 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D A1I_07520 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D A1I_07515 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D A1I_07510 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D A1I_07505 NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D A1I_05020 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D A1I_01460 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A1I_07725 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A1I_01440 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A1I_01445 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A1I_05275 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A1I_05280 Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A1I_05285 Cytochrome c1, heme protein precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D A1I_02720 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A1I_01805 Cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D A1I_02435 Cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D A1I_02450 Cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D A1I_03025 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D A1I_06525 Cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D A1I_02980 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D A1I_06490 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D A1I_03880 Cytochrome c K08738 CYC; cytochrome c D A1I_07470 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A1I_07460 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A1I_07465 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A1I_07475 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A1I_07455 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A1I_00415 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A1I_00405 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A1I_00400 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A1I_00410 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A1I_04575 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:rbo00680] D A1I_00320 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A1I_04320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A1I_01125 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A1I_01120 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] C 00910 Nitrogen metabolism [PATH:rbo00910] D A1I_00710 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A1I_04475 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism D A1I_04350 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:rbo00061] D A1I_07355 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D A1I_04145 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A1I_07280 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A1I_07360 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A1I_07350 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A1I_01340 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A1I_01015 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:rbo00071] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A1I_05365 acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism D A1I_05065 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:rbo00564] D A1I_01190 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D A1I_05065 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A1I_06995 Phospholipase D superfamily protein PLD K17717 pld; phospholipase D [EC:3.1.4.4] D A1I_05365 acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D A1I_04835 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D A1I_03815 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D A1I_03810 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D A1I_07845 Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D A1I_00050 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D A1I_06995 Phospholipase D superfamily protein PLD K17717 pld; phospholipase D [EC:3.1.4.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:rbo00230] D A1I_00860 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A1I_03060 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D A1I_04480 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D A1I_00785 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A1I_07245 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D A1I_04770 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A1I_04765 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A1I_00360 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D A1I_02185 Guanosine polyphosphate pyrophosphohydrolase/synthetase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D A1I_03145 Guanosine polyphosphate pyrophosphohydrolase/synthetase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D A1I_03225 Guanosine polyphosphate pyrophosphohydrolase/synthetase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D A1I_05160 Guanosine polyphosphate pyrophosphohydrolase/synthetase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D A1I_05655 Guanosine polyphosphate pyrophosphohydrolase/synthetase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D A1I_02280 Guanosine pentaphosphate phosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] C 00240 Pyrimidine metabolism [PATH:rbo00240] D A1I_01650 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D A1I_00785 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A1I_07195 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D A1I_03710 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D A1I_05675 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D A1I_00380 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D A1I_04770 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A1I_04765 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A1I_06675 tdk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D A1I_06125 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D A1I_06415 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:rbo00250] D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A1I_06100 Succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A1I_00710 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A1I_04475 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00260 Glycine, serine and threonine metabolism [PATH:rbo00260] D A1I_07820 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A1I_05230 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A1I_00320 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A1I_04395 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_03815 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:rbo00270] D A1I_04480 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D A1I_07745 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_02475 Cytosine-C5 specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_07740 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_07820 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A1I_05230 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A1I_04815 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A1I_04320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:rbo00280] D A1I_04815 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_05330 Acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D A1I_05340 Propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D A1I_03610 Succinyl-CoA:3-ketoacid-coenzyme A transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D A1I_03605 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rbo00290] D A1I_04815 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:rbo00300] D A1I_07820 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A1I_05230 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A1I_04805 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A1I_01615 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D A1I_07900 Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A1I_04280 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D A1I_02660 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A1I_02655 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:rbo00310] D A1I_01835 dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A1I_06100 Succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:rbo00220] D A1I_04475 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A1I_00710 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A1I_00485 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] C 00330 Arginine and proline metabolism D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism [PATH:rbo00350] D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A1I_06100 Succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:rbo00360] D A1I_07840 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:rbo00380] D A1I_01835 dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rbo00400] D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A1I_07840 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:rbo00430] D A1I_00710 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A1I_01120 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D A1I_01125 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D A1I_00265 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:rbo00450] D A1I_03745 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A1I_05480 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A1I_06680 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:rbo00460] D A1I_06960 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A1I_00320 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:rbo00470] D A1I_00855 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A1I_03850 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A1I_02485 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A1I_04280 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:rbo00480] D A1I_06015 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A1I_01255 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A1I_06360 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:rbo00540] D A1I_01345 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D A1I_03890 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D A1I_01335 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D A1I_05955 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D A1I_05190 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D A1I_06945 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D A1I_04985 KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D A1I_00825 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D A1I_03715 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D A1I_00870 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D A1I_06940 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rbo00541] D A1I_04640 Putative nucleoside-diphosphate sugar epimerase CapD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] D A1I_07570 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A1I_04645 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D A1I_05005 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A1I_06715 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D A1I_04635 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:rbo00550] D A1I_03685 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A1I_03845 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A1I_03840 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A1I_02485 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A1I_02660 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A1I_03850 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A1I_02655 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A1I_04830 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A1I_02650 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A1I_02500 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A1I_07390 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A1I_01885 Bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D A1I_01180 Penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D A1I_03100 Penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A1I_04005 Penicillin-binding protein dacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:rbo00552] D A1I_02920 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism D A1I_03930 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A1I_03925 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 00740 Riboflavin metabolism D A1I_04035 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:rbo00760] D A1I_01030 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D A1I_00680 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D A1I_00675 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D A1I_00125 NAD(p) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D A1I_06100 Succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:rbo00770] D A1I_05960 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D A1I_03695 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D A1I_04815 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:rbo00780] D A1I_07360 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A1I_07350 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A1I_01340 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A1I_01015 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A1I_05025 Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:rbo00785] D A1I_00640 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D A1I_00315 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_06505 Pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A1I_06500 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A1I_06305 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A1I_01830 kgd; alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D A1I_01835 dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis [PATH:rbo00790] D A1I_05145 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D A1I_00170 Folate synthesis bifunctional protein K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D A1I_00175 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A1I_01270 Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D A1I_01840 Putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D A1I_07835 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A1I_07840 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D A1I_02585 Organic radical activating enzymes K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D A1I_02865 Trans-regulatory protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D A1I_00395 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:rbo00670] D A1I_00175 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A1I_03740 Methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A1I_00320 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A1I_03210 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A1I_06415 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D A1I_02425 5-Formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:rbo00860] D A1I_04395 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D A1I_04650 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_05405 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_04065 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D A1I_06040 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D A1I_07950 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D A1I_07665 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D A1I_07940 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D A1I_07945 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D A1I_02720 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A1I_06525 Cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rbo00130] D A1I_05710 ubiA; prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D A1I_07010 UbiD family decarboxylases K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D A1I_04035 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D A1I_05420 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D A1I_04440 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D A1I_06730 Ubiquinone/menaquinone biosynthesis methlytransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D A1I_01800 Ubiquinone biosynthesis protein coq7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D A1I_03590 Tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:rbo00900] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A1I_04035 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D A1I_04760 Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D A1I_04680 Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D A1I_04830 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D A1I_04645 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:rbo00946] D A1I_06960 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:rbo00261] D A1I_07820 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A1I_05230 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A1I_04805 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A1I_01615 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:rbo00521] D A1I_03800 Extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A1I_04645 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D A1I_04145 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A1I_07350 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A1I_01015 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D A1I_07355 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D A1I_06960 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:rbo00362] D A1I_06140 Protocatechuate-3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D A1I_04035 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation D A1I_06140 Protocatechuate-3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:rbo03020] D A1I_01515 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A1I_01520 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A1I_02160 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A1I_03690 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:rbo03010] D A1I_05680 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A1I_00455 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A1I_02065 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A1I_02715 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A1I_02120 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A1I_07320 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A1I_01475 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A1I_02105 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A1I_06600 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A1I_02030 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A1I_02155 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A1I_01470 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A1I_02150 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A1I_02100 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A1I_04975 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A1I_07655 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A1I_02080 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A1I_07325 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D A1I_02055 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A1I_02170 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A1I_05430 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D A1I_01500 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A1I_02050 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A1I_02035 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A1I_02040 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A1I_02095 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A1I_02110 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A1I_01510 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A1I_07330 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A1I_01505 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A1I_01495 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A1I_06605 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A1I_02085 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A1I_02130 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A1I_02070 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A1I_02165 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A1I_02115 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A1I_01155 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A1I_02575 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A1I_07830 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A1I_02060 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A1I_02045 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A1I_02590 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D A1I_07825 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A1I_00470 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A1I_02075 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A1I_02125 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A1I_00475 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A1I_07285 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A1I_07660 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D A1I_02570 rplT; 50S ribosomal protein L20 K02914 RP-L34; large subunit ribosomal protein L34 D A1I_02580 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A1I_03245 hypothetical protein K02919 RP-L36; large subunit ribosomal protein L36 D A1I_r08027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A1I_r08025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:rbo00970] D A1I_t08007 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A1I_t08019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A1I_t07993 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A1I_t08003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A1I_t07989 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A1I_t07997 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A1I_t07999 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A1I_t07981 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D A1I_t07991 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A1I_t08013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A1I_t08009 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A1I_t07971 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A1I_t07977 tRNA-His K14226 tRNA-His; tRNA His D A1I_t07987 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A1I_t07967 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A1I_t08023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A1I_t07983 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A1I_t07985 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A1I_t08011 tRNA-Met K14230 tRNA-Met; tRNA Met D A1I_t07959 tRNA-Met K14230 tRNA-Met; tRNA Met D A1I_t08017 tRNA-Met K14230 tRNA-Met; tRNA Met D A1I_t07961 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A1I_t08015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A1I_t08001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A1I_t07995 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A1I_t07979 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A1I_t07965 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A1I_t08021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A1I_t07957 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A1I_t07963 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A1I_t07969 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D A1I_t08005 tRNA-Val K14237 tRNA-Val; tRNA Val D A1I_t07973 tRNA-Val K14237 tRNA-Val; tRNA Val D A1I_04650 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_05405 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_01635 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A1I_01630 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A1I_01640 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A1I_06025 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A1I_00750 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A1I_00755 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A1I_03065 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A1I_07550 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A1I_00460 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A1I_06680 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A1I_03210 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A1I_02925 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A1I_03430 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A1I_02545 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D A1I_00355 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A1I_05150 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A1I_03055 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A1I_04270 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A1I_04265 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A1I_05070 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:rbo03060] D A1I_02135 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A1I_01485 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A1I_00820 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A1I_04595 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D A1I_01360 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D A1I_04600 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A1I_00055 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A1I_02405 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A1I_00385 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A1I_01545 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A1I_00145 Signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A1I_07850 tatA; twin argininte translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D A1I_07555 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D A1I_01370 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D A1I_02465 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:rbo04122] D A1I_03930 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A1I_03925 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A1I_03045 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:rbo03018] D A1I_03785 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D A1I_06555 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D A1I_04980 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A1I_04790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D A1I_01025 Putative hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D A1I_01755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A1I_03365 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A1I_07055 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:rbo03030] D A1I_05965 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A1I_07575 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A1I_00665 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A1I_01540 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A1I_01795 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A1I_07905 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A1I_04260 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A1I_04020 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A1I_00625 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A1I_07075 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A1I_02935 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A1I_06890 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:rbo03410] D A1I_00335 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D A1I_05810 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D A1I_06720 Formamidopyrimidine-DNA glycosidase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A1I_00935 Uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A1I_06800 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A1I_06510 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A1I_06330 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A1I_06890 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:rbo03420] D A1I_02665 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A1I_07070 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A1I_01855 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D A1I_03500 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A1I_05925 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A1I_04505 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A1I_06890 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:rbo03430] D A1I_05820 DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D A1I_07705 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D A1I_04505 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A1I_06785 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A1I_04940 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A1I_06330 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A1I_07075 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A1I_07575 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A1I_04260 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A1I_00665 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A1I_01795 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A1I_01540 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A1I_05965 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A1I_07905 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A1I_06890 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A1I_05665 Site-specific DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:rbo03440] D A1I_06330 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A1I_07075 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A1I_00180 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D A1I_06345 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A1I_01060 recR; recombination protein RecR K06187 recR; recombination protein RecR D A1I_07345 recA; recombinase A K03553 recA; recombination protein RecA D A1I_03980 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA D A1I_03990 ruvB; Holliday junction DNA helicase B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A1I_01390 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D A1I_07575 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A1I_04260 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A1I_00665 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A1I_01795 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A1I_01540 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A1I_05965 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A1I_07905 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A1I_04040 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:rbo02010] D A1I_00900 ABC-type transporter K07323 mlaC; phospholipid transport system substrate-binding protein D A1I_05930 ABC transporter substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A1I_00850 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D A1I_00845 Ribonucleotide ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D A1I_07060 Zinc/manganese ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein D A1I_05425 Zinc/manganese ABC transporter permease protein K09816 znuB; zinc transport system permease protein D A1I_07915 Zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D A1I_01265 BioY family protein K03523 bioY; biotin transport system substrate-specific component D A1I_00020 O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein D A1I_00015 O-antigen export system ATP-binding protein RfbE K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D A1I_06845 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D A1I_01225 Heme exporter protein C K02195 ccmC; heme exporter protein C D A1I_05265 Heme exporter protein B K02194 ccmB; heme exporter protein B D A1I_07490 Heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D A1I_00255 Putative permeases K07091 lptF; lipopolysaccharide export system permease protein D A1I_07270 Putative permeases K11720 lptG; lipopolysaccharide export system permease protein D A1I_05000 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D A1I_03995 Multidrug resistance protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A1I_05235 Alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:rbo03070] D A1I_06660 Type I secretion outer membrane protein TolC K12340 tolC; outer membrane protein D A1I_04595 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D A1I_01360 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D A1I_01485 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A1I_00820 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A1I_02135 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A1I_04600 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A1I_00055 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A1I_02405 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A1I_00145 Signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A1I_00385 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A1I_01545 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A1I_07850 tatA; twin argininte translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D A1I_07555 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D A1I_00490 VirB3 K03198 virB3; type IV secretion system protein VirB3 D A1I_02300 VirB9 K03204 virB9; type IV secretion system protein VirB9 D A1I_02325 VirB9 K03204 virB9; type IV secretion system protein VirB9 D A1I_00960 VirB6 K03201 virB6; type IV secretion system protein VirB6 D A1I_00955 VirB6 K03201 virB6; type IV secretion system protein VirB6 D A1I_00965 VirB6 K03201 virB6; type IV secretion system protein VirB6 D A1I_00980 VirB6 K03201 virB6; type IV secretion system protein VirB6 D A1I_02305 VirB8 K03203 virB8; type IV secretion system protein VirB8 D A1I_02295 VirB10 K03195 virB10; type IV secretion system protein VirB10 D A1I_00950 VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D A1I_07545 VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D A1I_02290 VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D A1I_02285 VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:rbo02020] D A1I_04825 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D A1I_04820 PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D A1I_01430 Periplasmic serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A1I_06525 Cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D A1I_02685 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D A1I_03760 Spore coat protein-like protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A1I_03775 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A1I_03770 P pilus assembly, fimbrial Usher protein K07347 fimD; outer membrane usher protein D A1I_04475 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A1I_05325 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D A1I_06235 Nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A1I_06625 Histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D A1I_03790 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D A1I_00390 Transcriptional activator protein CzcR K13584 ctrA; two-component system, cell cycle response regulator CtrA D A1I_05275 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A1I_05280 Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A1I_05285 Cytochrome c1, heme protein precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D A1I_03880 Cytochrome c K08738 CYC; cytochrome c D A1I_02980 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D A1I_06490 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D A1I_06660 Type I secretion outer membrane protein TolC K12340 tolC; outer membrane protein D A1I_04635 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D A1I_05275 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:rbo02024] D A1I_04290 RND efflux system, outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system D A1I_00055 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A1I_01485 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A1I_00820 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A1I_02135 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A1I_04600 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A1I_02405 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A1I_00145 Signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A1I_00385 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A1I_01545 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D A1I_00620 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D A1I_00610 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:rbo01501] D A1I_04000 AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D A1I_04710 AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D A1I_04290 RND efflux system, outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system D A1I_06660 Type I secretion outer membrane protein TolC K12340 tolC; outer membrane protein D A1I_07390 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A1I_01180 Penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D A1I_03100 Penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A1I_07395 Class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:rbo01502] D A1I_03850 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A1I_00855 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A1I_02655 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A1I_02650 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A1I_02500 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rbo01503] D A1I_01430 Periplasmic serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A1I_06660 Type I secretion outer membrane protein TolC K12340 tolC; outer membrane protein D A1I_01345 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:rbo01000] C 01001 Protein kinases [BR:rbo01001] D A1I_04825 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D A1I_05325 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D A1I_06625 Histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:rbo01009] D A1I_04390 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:rbo01002] D A1I_02465 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D A1I_02420 Putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D A1I_06395 hypothetical protein K07052 K07052; CAAX protease family protein D A1I_06015 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A1I_07900 Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A1I_07100 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D A1I_04095 Aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D A1I_01825 Thermostable carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D A1I_07750 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A1I_01725 Putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D A1I_01430 Periplasmic serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A1I_02255 Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D A1I_04005 Penicillin-binding protein dacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A1I_05685 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A1I_05115 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D A1I_00030 SOS-response transcriptional repressors (RecA-mediated autopeptidases) K03503 umuD; DNA polymerase V [EC:3.4.21.-] D A1I_01370 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D A1I_06630 Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D A1I_04785 Signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D A1I_03325 Microcin C7 self-immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D A1I_06055 Microcin C7 resistance protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D A1I_05215 ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D A1I_01980 Ecotin precursor K08276 eco; ecotin D A1I_01425 Membrane protease subunit, stomatin/prohibitin-like protein K04087 hflC; modulator of FtsH protease HflC D A1I_01420 Protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:rbo01003] D A1I_02895 Alpha-(1,3)-fucosyltransferase K20151 fucT; alpha(1,3/1,4) fucosyltransferase [EC:2.4.1.65 2.4.1.152] D A1I_01885 Bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D A1I_07390 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:rbo01005] D A1I_01345 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D A1I_05190 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D A1I_03890 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D A1I_01335 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D A1I_05955 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D A1I_06945 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D A1I_06940 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D A1I_00870 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D A1I_00825 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D A1I_03715 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D A1I_04985 KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rbo01011] D A1I_03685 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A1I_03845 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A1I_03840 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A1I_02485 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A1I_02660 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A1I_03850 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A1I_00855 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A1I_03325 Microcin C7 self-immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D A1I_06055 Microcin C7 resistance protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D A1I_02650 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A1I_02500 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A1I_04570 Integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D A1I_07390 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A1I_01885 Bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D A1I_01180 Penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D A1I_03100 Penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A1I_04005 Penicillin-binding protein dacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A1I_03310 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D A1I_05180 Aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D A1I_06185 Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:rbo01004] D A1I_04145 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A1I_07280 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A1I_07360 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A1I_07350 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A1I_01340 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A1I_01015 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A1I_05065 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:rbo01006] D A1I_04680 Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D A1I_04830 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A1I_05010 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A1I_05710 ubiA; prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D A1I_02720 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:rbo01007] D A1I_02545 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D A1I_04650 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_05405 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_05070 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A1I_00460 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A1I_00355 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A1I_06680 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A1I_03430 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A1I_02925 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A1I_06025 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A1I_03055 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A1I_00750 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A1I_00755 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A1I_07550 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A1I_05150 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A1I_03065 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A1I_04270 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A1I_04265 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A1I_00880 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A1I_04395 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D A1I_04815 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:rbo00194] D A1I_07455 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A1I_07460 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A1I_07465 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A1I_07470 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A1I_07475 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A1I_00405 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A1I_00400 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A1I_00410 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A1I_00415 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A1I_00420 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:rbo03000] D A1I_07745 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_02475 Cytosine-C5 specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_07740 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_03920 Iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D A1I_03475 Putative transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D A1I_05025 Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D A1I_06750 Putative transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D A1I_04315 Putative transcriptional regulator K07726 K07726; putative transcriptional regulator D A1I_03830 BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D A1I_00805 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A1I_00430 Transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D A1I_00140 hypothetical protein K07735 algH; putative transcriptional regulator D A1I_06980 DnaK suppressor-like protein K06204 dksA; RNA polymerase-binding transcription factor D A1I_03085 hypothetical protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:rbo03021] D A1I_02160 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A1I_01515 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A1I_01520 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A1I_03690 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A1I_00620 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D A1I_00610 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D A1I_03490 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D A1I_01720 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D A1I_01490 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D A1I_06980 DnaK suppressor-like protein K06204 dksA; RNA polymerase-binding transcription factor D A1I_00635 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D A1I_04790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:rbo03019] D A1I_06555 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D A1I_01375 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A1I_01025 Putative hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D A1I_04980 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A1I_04790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D A1I_01755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A1I_03365 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A1I_07055 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D A1I_03785 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome C 03011 Ribosome [BR:rbo03011] D A1I_05680 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A1I_00455 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A1I_02065 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A1I_02715 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A1I_02120 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A1I_07320 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A1I_01475 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A1I_02105 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A1I_06600 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A1I_02030 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A1I_02155 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A1I_01470 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A1I_02150 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A1I_02100 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A1I_04975 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A1I_07655 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A1I_02080 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A1I_07325 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D A1I_02055 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A1I_02170 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A1I_05430 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D A1I_01500 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A1I_02050 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A1I_02035 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A1I_02040 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A1I_02095 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A1I_02110 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A1I_07330 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A1I_01505 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A1I_01495 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A1I_01510 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A1I_06605 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A1I_02085 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A1I_02130 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A1I_02070 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A1I_02165 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A1I_02115 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A1I_01155 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A1I_02575 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A1I_07830 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A1I_02060 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A1I_02045 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A1I_07825 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A1I_00470 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A1I_02075 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A1I_02125 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A1I_00475 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A1I_07285 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A1I_07660 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D A1I_02570 rplT; 50S ribosomal protein L20 K02914 RP-L34; large subunit ribosomal protein L34 D A1I_02580 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A1I_03245 hypothetical protein K02919 RP-L36; large subunit ribosomal protein L36 D A1I_02590 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D A1I_r08025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A1I_r08027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 03009 Ribosome biogenesis [BR:rbo03009] D A1I_01375 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A1I_01385 era; GTP-binding protein Era K03595 era; GTPase D A1I_00230 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D A1I_06980 DnaK suppressor-like protein K06204 dksA; RNA polymerase-binding transcription factor D A1I_03490 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D A1I_01720 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D A1I_01490 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D A1I_06805 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D A1I_06195 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D A1I_01600 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D A1I_00795 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A1I_03090 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D A1I_07865 Putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D A1I_03470 Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D A1I_02020 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D A1I_01715 Ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D A1I_06190 Ribosomal large subunit pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D A1I_06520 Ribosomal large subunit pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D A1I_00930 Ribosomal large subunit pseudouridine synthase RluD subfamily protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A1I_04955 rimM; 16S rRNA-processing protein K02860 rimM; 16S rRNA processing protein RimM D A1I_00770 Ribosomal protein L11 methylase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D A1I_06555 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D A1I_05165 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D A1I_06755 engA; GTP-binding protein EngA K03977 engA; GTPase D A1I_00760 Putative translation factor protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A1I_01075 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D A1I_03485 hypothetical protein K09748 rimP; ribosome maturation factor RimP D A1I_00085 Iojap-related protein K09710 ybeB; ribosome-associated protein D A1I_00310 hypothetical protein K07042 ybeY; probable rRNA maturation factor D A1I_02620 translation-associated GTPase K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:rbo03016] D A1I_04650 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_05405 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_05150 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A1I_03430 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A1I_06680 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A1I_00355 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A1I_06025 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A1I_03065 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A1I_07550 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A1I_00460 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A1I_02925 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A1I_03055 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A1I_04270 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A1I_04265 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A1I_05070 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A1I_05225 Protein kinase C inhibitor 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A1I_00590 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D A1I_04970 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D A1I_03930 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A1I_03925 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A1I_00760 Putative translation factor protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A1I_05010 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A1I_00195 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D A1I_00790 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A1I_04350 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D A1I_02565 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D A1I_03465 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D A1I_04845 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D A1I_04530 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D A1I_00810 putative ABC transporter ATP-binding component K06020 ettA; energy-dependent translational throttle protein EttA D A1I_02545 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D A1I_00750 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A1I_00755 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A1I_07935 Cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D A1I_01285 Putative dihydrouridine synthase Dus K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D A1I_07380 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D A1I_04275 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D A1I_01395 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D A1I_01150 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D A1I_03045 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A1I_03940 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D A1I_04520 Glycine cleavage T-protein K06980 ygfZ; tRNA-modifying protein YgfZ D A1I_02360 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D A1I_02865 Trans-regulatory protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D A1I_01840 Putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D A1I_02585 Organic radical activating enzymes K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D A1I_00395 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D A1I_00570 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D A1I_00995 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D A1I_07755 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D A1I_06120 Putative glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D A1I_00985 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D A1I_00440 Putative P-loop hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D A1I_04980 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A1I_02270 Toxin of toxin-antitoxin (TA) system VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:rbo03012] D A1I_03495 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A1I_06300 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A1I_00450 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D A1I_02025 elongation factor Tu K02358 tuf; elongation factor Tu D A1I_01480 elongation factor G K02355 fusA; elongation factor G D A1I_06315 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D A1I_01645 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D A1I_00915 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A1I_02595 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D A1I_07190 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D A1I_03795 elongation factor P K02356 efp; elongation factor P D A1I_03415 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:rbo03110] D A1I_07620 ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D A1I_02875 clpX; ATP-dependent protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D A1I_05210 hslU; ATP-dependent protease ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D A1I_04390 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D A1I_01755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A1I_03365 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A1I_01750 DnaJ K03686 dnaJ; molecular chaperone DnaJ D A1I_02940 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D A1I_03460 GrpE protein K03687 GRPE; molecular chaperone GrpE D A1I_03370 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D A1I_01430 Periplasmic serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A1I_07750 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A1I_00415 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A1I_00385 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A1I_04535 hypothetical protein K09796 pccA; periplasmic copper chaperone A D A1I_00010 Thioredoxin K03671 TXN; thioredoxin D A1I_01860 Glutaredoxin GrxC K03676 grxC; glutaredoxin 3 D A1I_00330 glutaredoxin-like protein grla K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking [BR:rbo04131] D A1I_00785 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A1I_04390 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:rbo04121] C 03051 Proteasome [BR:rbo03051] D A1I_04390 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:rbo03032] D A1I_07745 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_02475 Cytosine-C5 specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_07740 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_01535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A1I_06965 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D A1I_04780 Integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D A1I_02685 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D A1I_04020 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A1I_00625 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A1I_07075 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A1I_07575 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A1I_04260 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A1I_07905 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A1I_01795 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A1I_01540 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A1I_05965 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A1I_00665 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A1I_02935 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A1I_06890 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A1I_05665 Site-specific DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D A1I_05100 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A1I_03680 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A1I_00340 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A1I_06635 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A1I_04655 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:rbo03036] D A1I_07745 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_02475 Cytosine-C5 specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_07740 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_01375 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A1I_01535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A1I_06965 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D A1I_04780 Integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D A1I_02685 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D A1I_07485 Strees induced DNA-binding Dps family protein K04047 dps; starvation-inducible DNA-binding protein D A1I_03870 Cell division protein ftsA K03590 ftsA; cell division protein FtsA D A1I_03100 Penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A1I_07115 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D A1I_03095 Cell division protein FtsL K03586 ftsL; cell division protein FtsL D A1I_03855 Cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ D A1I_02495 Cell division protein ftsW K03588 ftsW; cell division protein FtsW D A1I_01985 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A1I_03220 Putative ATPase n2B K06916 zapE; cell division protein ZapE D A1I_07265 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D A1I_07255 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D A1I_02245 Rod shape-determining protein rodA K05837 rodA; rod shape determining protein RodA D A1I_00800 ATPase K03496 parA; chromosome partitioning protein D A1I_06020 Chromosome partitioning protein-like protein K03496 parA; chromosome partitioning protein D A1I_00805 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A1I_00340 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A1I_06635 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A1I_00790 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A1I_00795 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A1I_06985 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D A1I_03635 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D A1I_01415 Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D A1I_03970 Cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D A1I_05390 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D A1I_04870 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D A1I_00480 GTPase EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:rbo03400] D A1I_04550 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D A1I_07400 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D A1I_05810 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D A1I_00335 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D A1I_02830 ADP-ribose pyrophosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A1I_06125 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D A1I_00935 Uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A1I_06720 Formamidopyrimidine-DNA glycosidase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A1I_06800 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A1I_06510 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A1I_06330 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A1I_06890 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A1I_07070 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A1I_01855 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D A1I_03500 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A1I_05925 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A1I_04505 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A1I_01515 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A1I_01520 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A1I_02160 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A1I_03690 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A1I_02665 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A1I_05820 DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D A1I_07705 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D A1I_06785 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A1I_04940 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A1I_07575 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A1I_04260 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A1I_07905 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A1I_01795 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A1I_01540 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A1I_05965 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A1I_00665 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A1I_07075 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A1I_05665 Site-specific DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D A1I_07345 recA; recombinase A K03553 recA; recombination protein RecA D A1I_03980 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA D A1I_03990 ruvB; Holliday junction DNA helicase B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A1I_01390 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D A1I_04040 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D A1I_06215 predicted repair protein K04485 radA; DNA repair protein RadA/Sms D A1I_00180 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D A1I_06345 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A1I_01060 recR; recombination protein RecR K06187 recR; recombination protein RecR D A1I_01820 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D A1I_05990 ATP-dependent helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D A1I_03340 RecB family exonuclease K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D A1I_05100 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A1I_03680 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A1I_04655 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D A1I_01535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A1I_06965 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D A1I_04780 Integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D A1I_00030 SOS-response transcriptional repressors (RecA-mediated autopeptidases) K03503 umuD; DNA polymerase V [EC:3.4.21.-] D A1I_04770 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A1I_04765 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:rbo03029] D A1I_05280 Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A1I_03495 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A1I_06300 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A1I_00450 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D A1I_02025 elongation factor Tu K02358 tuf; elongation factor Tu D A1I_01480 elongation factor G K02355 fusA; elongation factor G D A1I_01385 era; GTP-binding protein Era K03595 era; GTPase D A1I_06025 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A1I_00355 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A1I_01635 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A1I_01630 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A1I_01640 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A1I_07075 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A1I_01730 Outer membrane protein omp1 K07277 SAM50; outer membrane protein insertion porin family D A1I_01755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A1I_03460 GrpE protein K03687 GRPE; molecular chaperone GrpE D A1I_03365 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A1I_03370 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D A1I_01750 DnaJ K03686 dnaJ; molecular chaperone DnaJ D A1I_03930 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A1I_03925 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A1I_03935 scaffold protein K22068 ISCU; iron-sulfur cluster assembly enzyme ISCU, mitochondrial D A1I_02940 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D A1I_00330 glutaredoxin-like protein grla K07390 grxD; monothiol glutaredoxin D A1I_03300 hypothetical protein K18162 NDUFAF5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 [EC:2.1.1.-] D A1I_01415 Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D A1I_02720 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A1I_03025 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D A1I_06525 Cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D A1I_00055 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A1I_05985 Surfeit locus protein 1 K14998 SURF1; surfeit locus 1 family protein D A1I_04590 Sco2 protein precursor K07152 SCO1; protein SCO1 D A1I_04390 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:rbo02000] D A1I_03995 Multidrug resistance protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A1I_02845 Multidrug resistance protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A1I_06390 ABC-type multidrug transport system, ATPase component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A1I_02990 Multidrug resistance ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A1I_05855 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A1I_05235 Alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A1I_07365 ABC transporter ATP-binding protein Uup K15738 uup; ABC transport system ATP-binding/permease protein D A1I_04925 ABC-type anion transport system permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A1I_05930 ABC transporter substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A1I_00850 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D A1I_00845 Ribonucleotide ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D A1I_00900 ABC-type transporter K07323 mlaC; phospholipid transport system substrate-binding protein D A1I_02520 ABC-type transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D A1I_02525 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein D A1I_02530 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D A1I_01625 Amino acid ABC transporter substrate binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A1I_06790 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A1I_01465 Amino acid ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D A1I_00270 Glutamine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A1I_07060 Zinc/manganese ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein D A1I_05425 Zinc/manganese ABC transporter permease protein K09816 znuB; zinc transport system permease protein D A1I_07915 Zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D A1I_01265 BioY family protein K03523 bioY; biotin transport system substrate-specific component D A1I_00020 O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein D A1I_00015 O-antigen export system ATP-binding protein RfbE K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D A1I_00255 Putative permeases K07091 lptF; lipopolysaccharide export system permease protein D A1I_07270 Putative permeases K11720 lptG; lipopolysaccharide export system permease protein D A1I_05000 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D A1I_06845 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D A1I_01225 Heme exporter protein C K02195 ccmC; heme exporter protein C D A1I_05265 Heme exporter protein B K02194 ccmB; heme exporter protein B D A1I_07490 Heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D A1I_07670 Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D A1I_00560 Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D A1I_02190 MFS-type transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D A1I_03230 MFS-type transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D A1I_03965 Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D A1I_04000 AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D A1I_04710 AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D A1I_06830 MFS-type bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D A1I_02625 MFS-type bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D A1I_01660 MFS-type multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A1I_05980 hypothetical protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D A1I_01255 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A1I_00060 hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel D A1I_03650 Magnesium transporter K06213 mgtE; magnesium transporter D A1I_06470 TolQ K03562 tolQ; biopolymer transport protein TolQ D A1I_06465 TolR K03560 tolR; biopolymer transport protein TolR D A1I_02240 Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D A1I_03770 P pilus assembly, fimbrial Usher protein K07347 fimD; outer membrane usher protein D A1I_06450 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase D A1I_06660 Type I secretion outer membrane protein TolC K12340 tolC; outer membrane protein D A1I_04290 RND efflux system, outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system D A1I_01730 Outer membrane protein omp1 K07277 SAM50; outer membrane protein insertion porin family D A1I_06610 WD40-like repeat protein K17713 bamB; outer membrane protein assembly factor BamB D A1I_01815 DNA uptake lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D A1I_04995 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D A1I_04990 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D A1I_06780 Organic solvent tolerance protein-like protein K04744 lptD; LPS-assembly protein D A1I_00305 Hemolysin C K06189 corC; hemolysin (HlyC) family protein D A1I_07930 Cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D A1I_07125 SMR-type multi-drug efflux transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D A1I_00105 S-adenosylmethionine transporter K15270 sam; S-adenosylmethionine uptake transporter D A1I_07885 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D A1I_00080 Glutathione-regulated potassium-efflux system protein KefB K03455 KEA1_2_3; K+:H+ antiporter D A1I_05260 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D A1I_02330 putative monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D A1I_02340 NADH:ubiquinone oxidoreductase subunit 2 (chain N) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D A1I_02355 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D A1I_01655 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D A1I_05255 Monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D A1I_04570 Integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D A1I_02550 Putative permease K13936 mdcF; malonate transporter and related proteins D A1I_05490 Putative permease K24180 mleP; malate permease and related proteins D A1I_04720 Lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D A1I_04715 hypothetical protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D A1I_03435 Putative integral membrane protein K09125 yhhQ; queuosine precursor transporter D A1I_02495 Cell division protein ftsW K03588 ftsW; cell division protein FtsW D A1I_06170 FTR1 family protein K07243 FTR; high-affinity iron transporter D A1I_06760 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D A1I_07275 Peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein D A1I_06455 tolB; translocation protein TolB precursor K03641 tolB; TolB protein D A1I_03820 Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system D A1I_05240 Alkaline protease secretion protein AprE K12537 hasE; membrane fusion protein, type I secretion system D A1I_07880 hypothetical protein K16348 ecnB; entericidin B C 02044 Secretion system [BR:rbo02044] D A1I_06660 Type I secretion outer membrane protein TolC K12340 tolC; outer membrane protein D A1I_05235 Alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A1I_05240 Alkaline protease secretion protein AprE K12537 hasE; membrane fusion protein, type I secretion system D A1I_07050 ComEC/Rec2 family protein K02238 comEC; competence protein ComEC D A1I_00490 VirB3 K03198 virB3; type IV secretion system protein VirB3 D A1I_00950 VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D A1I_07545 VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D A1I_00960 VirB6 K03201 virB6; type IV secretion system protein VirB6 D A1I_00955 VirB6 K03201 virB6; type IV secretion system protein VirB6 D A1I_00965 VirB6 K03201 virB6; type IV secretion system protein VirB6 D A1I_00980 VirB6 K03201 virB6; type IV secretion system protein VirB6 D A1I_02305 VirB8 K03203 virB8; type IV secretion system protein VirB8 D A1I_02300 VirB9 K03204 virB9; type IV secretion system protein VirB9 D A1I_02325 VirB9 K03204 virB9; type IV secretion system protein VirB9 D A1I_02295 VirB10 K03195 virB10; type IV secretion system protein VirB10 D A1I_02290 VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D A1I_02285 VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D A1I_05605 Conjugative transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG D A1I_05595 F pilus assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF D A1I_05590 Conjugative transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN D A1I_05585 Conjugative transfer protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC D A1I_05580 Conjugal DNA transfer protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU D A1I_05570 Conjugative transfer protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW D A1I_05565 Conjugative transfer protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC D A1I_05555 F pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB D A1I_05540 Conjugative transfer protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE D A1I_05600 F pilus assembly protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH D A1I_06450 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase D A1I_03770 P pilus assembly, fimbrial Usher protein K07347 fimD; outer membrane usher protein D A1I_03760 Spore coat protein-like protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A1I_03775 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A1I_02405 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A1I_00385 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A1I_04595 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D A1I_01485 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A1I_01360 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D A1I_00820 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A1I_02135 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A1I_01545 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A1I_00145 Signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A1I_04600 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A1I_00055 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A1I_07850 tatA; twin argininte translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D A1I_07555 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:rbo02042] C 02022 Two-component system [BR:rbo02022] D A1I_04825 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D A1I_04820 PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D A1I_05325 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D A1I_06235 Nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D A1I_06625 Histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D A1I_03790 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D A1I_00390 Transcriptional activator protein CzcR K13584 ctrA; two-component system, cell cycle response regulator CtrA C 02035 Bacterial motility proteins [BR:rbo02035] D A1I_03770 P pilus assembly, fimbrial Usher protein K07347 fimD; outer membrane usher protein D A1I_03760 Spore coat protein-like protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A1I_03775 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:rbo04812] D A1I_07265 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D A1I_01985 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A1I_03870 Cell division protein ftsA K03590 ftsA; cell division protein FtsA D A1I_00800 ATPase K03496 parA; chromosome partitioning protein D A1I_06020 Chromosome partitioning protein-like protein K03496 parA; chromosome partitioning protein D A1I_00805 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:rbo04147] D A1I_04390 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D A1I_04670 Thioredoxin peroxidase 1 K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D A1I_03365 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A1I_01755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A1I_02025 elongation factor Tu K02358 tuf; elongation factor Tu D A1I_05225 Protein kinase C inhibitor 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A1I_07215 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A1I_04475 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A1I_04065 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D A1I_07835 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A1I_03305 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A1I_07480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 02048 Prokaryotic defense system [BR:rbo02048] D A1I_05730 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D A1I_07890 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D A1I_00605 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D A1I_05665 Site-specific DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D A1I_07745 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_02475 Cytosine-C5 specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_07740 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A1I_04895 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D A1I_01920 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D A1I_07630 PemK-like growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D A1I_01325 Cytotoxic translational repressor of toxin-antitoxin (TA) system RelE K06218 relE; mRNA interferase RelE/StbE D A1I_07635 Cytotoxic translational repressor of toxin-antitoxin (TA) system RelE K06218 relE; mRNA interferase RelE/StbE D A1I_07760 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D A1I_01320 Antitoxin of toxin-antitoxin (TA) system StbD K18923 stbD; antitoxin StbD D A1I_02630 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D A1I_03005 Putative toxin of toxin-antitoxin (TA) system K19158 yoeB; toxin YoeB [EC:3.1.-.-] D A1I_00990 hypothetical protein K19159 yefM; antitoxin YefM D A1I_00885 hypothetical protein K19159 yefM; antitoxin YefM D A1I_03010 Antitoxin of toxin-antitoxin (TA) system StbD K19159 yefM; antitoxin YefM D A1I_01455 Toxin of toxin-antitoxin (TA) system ParE K19092 parE1_3_4; toxin ParE1/3/4 D A1I_01450 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D A1I_00740 Putative antitoxin of toxin-antitoxin (TA) system K19165 phd; antitoxin Phd D A1I_06750 Putative transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D A1I_02270 Toxin of toxin-antitoxin (TA) system VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D A1I_00745 Toxin of toxin-antitoxin (TA) system VapC K07062 fitB; toxin FitB [EC:3.1.-.-] D A1I_01985 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A1I_07265 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D A1I_00340 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A1I_06635 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A1I_04650 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_05405 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A1I_02670 Tetratricopeptide repeat-containing protein K09159 cptB; antitoxin CptB D A1I_03930 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A1I_03925 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors [BR:rbo04054] C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:rbo01504] D A1I_05380 hypothetical protein K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82] D A1I_05980 hypothetical protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D A1I_02800 transferase hexapeptide repeat protein K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D A1I_04290 RND efflux system, outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system D A1I_06660 Type I secretion outer membrane protein TolC K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:rbo03100] D A1I_t08007 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A1I_t08019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A1I_t07993 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A1I_t08003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A1I_t07989 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A1I_t07997 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A1I_t07999 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A1I_t07981 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D A1I_t07991 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A1I_t08013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A1I_t08009 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A1I_t07971 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A1I_t07977 tRNA-His K14226 tRNA-His; tRNA His D A1I_t07987 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A1I_t07967 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A1I_t08023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A1I_t07983 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A1I_t07985 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A1I_t08011 tRNA-Met K14230 tRNA-Met; tRNA Met D A1I_t07959 tRNA-Met K14230 tRNA-Met; tRNA Met D A1I_t08017 tRNA-Met K14230 tRNA-Met; tRNA Met D A1I_t07961 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A1I_t08015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A1I_t08001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A1I_t07995 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A1I_t07979 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A1I_t07965 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A1I_t08021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A1I_t07957 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A1I_t07963 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A1I_t07969 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D A1I_t08005 tRNA-Val K14237 tRNA-Val; tRNA Val D A1I_t07973 tRNA-Val K14237 tRNA-Val; tRNA Val D A1I_r08027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A1I_r08025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D A1I_06975 Bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A1I_02770 Cephalosporin hydroxylase K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39] D A1I_03480 hypothetical protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D A1I_01010 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D A1I_00065 putative carbamate kinase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D A1I_00005 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D A1I_06685 Putative deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D A1I_01910 Lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D A1I_03205 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A1I_04485 Polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A1I_04170 Polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A1I_06530 Putative esterase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D A1I_05120 threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D A1I_05130 Threonine dehydratase-like protein K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D A1I_02955 Ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D A1I_01220 Ferredoxin K05524 fdxA; ferredoxin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism D A1I_06735 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D A1I_05435 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D A1I_01705 Oligoketide cyclase/lipid transport protein K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D A1I_00325 Serine esterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D A1I_01950 Cold shock-like protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D A1I_00735 tig; trigger factor K03545 tig; trigger factor D A1I_04800 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D A1I_05205 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D A1I_07095 DNA repair protein RadC K03630 radC; DNA repair protein RadC D A1I_02890 RmuC family protein K09760 rmuC; DNA recombination protein RmuC D A1I_00365 Endonuclease K07461 K07461; putative endonuclease D A1I_05795 Excinuclease ABC subunit C K07461 K07461; putative endonuclease D A1I_04660 Putative DNA processing protein DprA K04096 smf; DNA processing protein D A1I_05880 Transposase and inactivated derivative K07480 insB; insertion element IS1 protein InsB D A1I_00120 Transposase and inactivated derivative K07486 K07486; transposase D A1I_00200 Transposase and inactivated derivative K07486 K07486; transposase D A1I_00910 Transposase and inactivated derivative K07486 K07486; transposase D A1I_00940 Transposase and inactivated derivative K07486 K07486; transposase D A1I_01115 Transposase and inactivated derivative K07486 K07486; transposase D A1I_01995 Transposase and inactivated derivative K07486 K07486; transposase D A1I_01200 Transposase and inactivated derivative K07486 K07486; transposase D A1I_04510 Transposase and inactivated derivative K07486 K07486; transposase D A1I_06075 Transposase and inactivated derivative K07486 K07486; transposase D A1I_06145 Transposase and inactivated derivative K07486 K07486; transposase D A1I_03600 Transposase and inactivated derivative K07486 K07486; transposase D A1I_06380 Transposase and inactivated derivative K07486 K07486; transposase D A1I_06435 Transposase and inactivated derivative K07486 K07486; transposase D A1I_06535 Transposase and inactivated derivative K07486 K07486; transposase D A1I_03860 Transposase and inactivated derivative K07486 K07486; transposase D A1I_05305 Transposase and inactivated derivative K07486 K07486; transposase D A1I_05415 Transposase and inactivated derivative K07486 K07486; transposase D A1I_06645 Transposase and inactivated derivative K07486 K07486; transposase D A1I_06770 Transposase and inactivated derivative K07486 K07486; transposase D A1I_06810 Transposase and inactivated derivative K07486 K07486; transposase D A1I_07105 Transposase and inactivated derivative K07486 K07486; transposase D A1I_02345 Transposase and inactivated derivative K07486 K07486; transposase D A1I_04090 Transposase and inactivated derivative K07486 K07486; transposase D A1I_02750 Transposase and inactivated derivative K07486 K07486; transposase D A1I_01230 Transposase and inactivated derivative K07486 K07486; transposase D A1I_03520 Transposase and inactivated derivative K07493 K07493; putative transposase D A1I_03565 Transposase and inactivated derivative K07493 K07493; putative transposase D A1I_03570 Transposase and inactivated derivative K07493 K07493; putative transposase C 99979 Viral proteins C 99998 Others D A1I_00660 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D A1I_03050 Cationic amino acid transporter-1 K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A1I_01530 Hydrophobe/amphiphile efflux-1 (HAE1) family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D A1I_04305 RND family efflux transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D A1I_00775 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D A1I_04965 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D A1I_07205 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family C 99978 Cell growth D A1I_06175 intracellular septation protein A K06190 ispZ; intracellular septation protein D A1I_05515 Cassette chromosome recombinase B K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D A1I_02970 Universal stress protein UspA and related nucleotide-binding proteins K14061 uspF; universal stress protein F D A1I_06375 GTP-binding protein K06207 typA; GTP-binding protein C 99992 Structural proteins D A1I_00895 VacJ lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA D A1I_00110 OmpW family outer-membrane protein K07275 ompW; outer membrane protein D A1I_02730 Outer membrane assembly protein K07289 asmA; AsmA protein D A1I_04580 cytochrome c-type biogenesis protein CcmE/CycJ K02197 ccmE; cytochrome c-type biogenesis protein CcmE C 99994 Others D A1I_07535 Tellurium resistance protein TerC K05794 terC; tellurite resistance protein TerC D A1I_01845 Periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D A1I_05175 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY B B 09194 Poorly characterized C 99996 General function prediction only D A1I_01745 Cation transport regulator ChaB K06197 chaB; cation transport regulator D A1I_00830 EMAP domain containing protein K06878 K06878; tRNA-binding protein D A1I_01310 Putative esterase K07001 K07001; NTE family protein D A1I_00370 Iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D A1I_04110 Putative ribonuclease BN K07058 K07058; membrane protein D A1I_01435 hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D A1I_06640 Ankyrin repeat K06867 K06867; uncharacterized protein D A1I_06035 Ankyrin repeat K06867 K06867; uncharacterized protein D A1I_06575 Ankyrin repeat K06867 K06867; uncharacterized protein D A1I_07130 Ankyrin repeat K06867 K06867; uncharacterized protein D A1I_07140 Ankyrin repeat K06867 K06867; uncharacterized protein D A1I_04610 Putative hydrolase/acyltransferase K06889 K06889; uncharacterized protein D A1I_01610 Integral membrane protein K06890 K06890; uncharacterized protein D A1I_05050 Putative hydrolase K07018 K07018; uncharacterized protein D A1I_06545 Nucleotidyltransferase K07076 K07076; uncharacterized protein D A1I_00575 Nucleotidyltransferase K07076 K07076; uncharacterized protein D A1I_02965 TRAP-type uncharacterized transport system, periplasmic component K07080 K07080; uncharacterized protein D A1I_03895 Putative AAA+ superfamily ATPase K07133 K07133; uncharacterized protein D A1I_07065 AAA+ superfamily protein K07133 K07133; uncharacterized protein D A1I_06475 AAA+ superfamily protein K07133 K07133; uncharacterized protein D A1I_06740 Putative AAA+ superfamily ATPase K07133 K07133; uncharacterized protein D A1I_07405 Putative AAA+ superfamily ATPase K07133 K07133; uncharacterized protein D A1I_05845 AAA+ superfamily protein K07133 K07133; uncharacterized protein D A1I_04255 Putative AAA+ superfamily ATPase K07133 K07133; uncharacterized protein D A1I_05805 hypothetical protein K08998 K08998; uncharacterized protein D A1I_04385 hypothetical protein K09131 K09131; uncharacterized protein D A1I_01525 hypothetical protein K09779 K09779; uncharacterized protein D A1I_04160 hypothetical protein K09803 K09803; uncharacterized protein D A1I_06690 hypothetical protein K09805 K09805; uncharacterized protein D A1I_02510 hypothetical protein K09861 K09861; uncharacterized protein D A1I_05950 hypothetical protein K09985 K09985; uncharacterized protein D A1I_00130 hypothetical protein K09987 K09987; uncharacterized protein D A1I_06655 hypothetical protein K09991 K09991; uncharacterized protein D A1I_01410 Putative nucleoside-diphosphate-sugar epimerase K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 5, 2024