+D GENES KO
#
KEGG Orthology (KO) - Rubrivivax gelatinosus
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rge00010]
D RGE_02550 putative glucokinase/RipR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_02560 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_08410 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGE_14210 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGE_07440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGE_18460 cbbF; fructose-1,6-bisphosphatase CbbF K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGE_36020 cbbF; fructose-1,6-bisphosphatase CbbF K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGE_04650 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_35980 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_15550 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGE_44760 cbbG; glyceraldehyde-3-phosphate dehydrogenase CbbG K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGE_04620 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGE_41950 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_44310 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_46250 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_14990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGE_22610 putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGE_04640 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGE_21180 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGE_27220 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGE_23650 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGE_18330 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGE_23660 aceF; dihydrolipoamide acetyltransferase AceF K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_28660 porA; pyruvate ferredoxin oxidoreductase alpha subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RGE_28670 porB; pyruvate ferredoxin oxidoreductase beta subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RGE_28650 porC; pyruvate ferredoxin oxidoreductase gamma subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RGE_20970 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RGE_11300 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_26160 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_11350 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGE_38410 adhB; iron-containing alcohol dehydrogenase AdhB K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D RGE_23040 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGE_35630 NAD-dependent aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RGE_18530 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_18640 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_02340 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RGE_22220 haloacid dehalogenase-like hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D RGE_22370 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGE_01070 pckG; phosphoenolpyruvate carboxykinase [GTP] PckG K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:rge00020]
D RGE_12310 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D RGE_29810 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1]
D RGE_38310 acnA; aconitate hydrase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RGE_12220 acnB; aconitate hydrase 2 AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RGE_31820 icd; isocitrate dehydrogenase [NADP] Icd K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGE_27750 odhA; 2-oxoglutarate dehydrogenase E1 component OdhA K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RGE_27740 odhB; 2-oxoglutarate dehydrogenase E2 component OdhB K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_12330 sucD; succinyl-CoA ligase[ADP-forming] subunit alpha SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGE_46560 sucD; succinyl-CoA ligase[ADP-forming] subunit alpha SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGE_12340 sucC; succinyl-CoA ligase[ADP-forming] subunit bata SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGE_46570 sucC; succinyl-CoA ligase[ADP-forming] subunit bata SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGE_11660 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RGE_12280 sdhA; succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGE_12290 sdhB; succinate dehydrogenase iron-sulfur subunit SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGE_06500 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGE_12260 sdhC; succinate dehydrogenase cytochrome b556 subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGE_12270 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGE_21280 frdA; fumarate reductase flavoprotein subunit FrdA K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGE_21270 frdB; fumarate reductase iron-sulfur subunit FrdB K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGE_21260 frdC; fumarate reductase subunit C FrdC K00246 frdC; succinate dehydrogenase subunit C
D RGE_21250 frdD; fumarate reductase subunit D FrdD K00247 frdD; succinate dehydrogenase subunit D
D RGE_18620 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RGE_28550 fumC; fumarate hydratase class II FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RGE_12240 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGE_21240 pyc; pyruvate carboxylase Pyc K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RGE_01070 pckG; phosphoenolpyruvate carboxykinase [GTP] PckG K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RGE_23650 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGE_18330 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGE_23660 aceF; dihydrolipoamide acetyltransferase AceF K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGE_28660 porA; pyruvate ferredoxin oxidoreductase alpha subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RGE_28670 porB; pyruvate ferredoxin oxidoreductase beta subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RGE_28650 porC; pyruvate ferredoxin oxidoreductase gamma subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RGE_20970 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:rge00030]
D RGE_08410 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGE_08370 zwf; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGE_02940 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGE_36040 cbbE; ribulose-5-phosphate 3-epimerase CbbE K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGE_36000 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGE_44770 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGE_08400 tal; transaldolase B Tal K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RGE_16160 rpiA; ribose-5-phosphate isomerase A RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RGE_45740 deoC; deoxyribose-phosphate aldolase DeoC K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RGE_17680 rbsK; ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15]
D RGE_22370 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGE_08710 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGE_41960 putative ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGE_34470 edd; phosphogluconate dehydratase Edd K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D RGE_34460 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase Eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RGE_34440 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D RGE_36270 gcd; quinoprotein glucose dehydrogenase Gcd K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D RGE_23550 oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RGE_32500 gntK; gluconokinase GntK K00851 idnK; gluconokinase [EC:2.7.1.12]
D RGE_05490 kdgK; 2-dehydro-3-deoxygluconokinase KdgK K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RGE_00220 ttuD; putative hydroxypyruvate reductase TtuD K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGE_04650 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_35980 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_18460 cbbF; fructose-1,6-bisphosphatase CbbF K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGE_36020 cbbF; fructose-1,6-bisphosphatase CbbF K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGE_14210 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGE_07440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rge00040]
D RGE_05460 kduI; 5-keto-4-deoxyuronate isomerase KduI K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D RGE_10850 ugd; UDP-glucose 6-dehydrogenase Ugd K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGE_33980 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGE_02940 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGE_36040 cbbE; ribulose-5-phosphate 3-epimerase CbbE K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGE_11160 putative phosphotransferase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RGE_11170 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RGE_26360 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:rge00051]
D RGE_41200 mtlZ; fructokinase MtlZ K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RGE_10860 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGE_41450 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGE_35090 algC; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RGE_41260 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGE_41600 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGE_41610 fcl; GDP-L-fucose synthase Fcl K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RGE_11170 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RGE_26360 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RGE_14210 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGE_07440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGE_18460 cbbF; fructose-1,6-bisphosphatase CbbF K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGE_36020 cbbF; fructose-1,6-bisphosphatase CbbF K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGE_16120 fruK; 1-phosphofructokinase FruK K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RGE_04650 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_35980 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_15550 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGE_16130 fruA; PTS system, fructose-specific IIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RGE_44030 phosphotransferase system, fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rge00052]
D RGE_02340 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RGE_10870 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGE_33980 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGE_22370 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGE_02550 putative glucokinase/RipR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_02560 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_17020 glf; UDP-galactopyranose mutase Glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RGE_14210 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGE_07440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:rge00053]
D RGE_10850 ugd; UDP-glucose 6-dehydrogenase Ugd K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGE_03970 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:rge00500]
D RGE_33980 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGE_29070 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGE_29060 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D RGE_19040 glgB; putative 1,4-alpha-glucan-branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGE_29090 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGE_29080 glgP; glycogen phosphorylase GlgP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RGE_29100 glgX; glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D RGE_02680 pulA; pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D RGE_02590 malS; alpha-amylase MalS K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RGE_02660 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RGE_22170 treS; putative trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D RGE_22360 malQ; 4-alpha-glucanotransferase MalQ K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RGE_29110 malQ; 4-alpha-glucanotransferase MalQ K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RGE_22350 treZ; putative malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D RGE_23560 otsB; trehalose-phosphatase protein OtsB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D RGE_23570 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D RGE_22370 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGE_02550 putative glucokinase/RipR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_02560 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_08410 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGE_41200 mtlZ; fructokinase MtlZ K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rge00520]
D RGE_40940 nagZ; beta-N-acetylhexosaminidase NagZ K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RGE_41200 mtlZ; fructokinase MtlZ K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RGE_05180 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGE_33210 glmM; phosphoglucosamine mutase GlmM K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RGE_04800 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RGE_07610 anmK; anhydro-N-acetylmuramic acid kinase AnmK K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RGE_13950 gph; phosphoglycolate phosphatase Gph K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D RGE_44780 nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RGE_08570 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGE_14110 murB; UDP-N-acetylmuramate dehydrogenase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGE_04130 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RGE_41570 bplA; putative oxidoreductase BplA/WlbA K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RGE_41550 putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D RGE_41560 wbpD; similar to bacterial transferase hexapeptide K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D RGE_04180 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase WecC K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RGE_24780 NAD-dependent epimerase/dehydratase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RGE_02550 putative glucokinase/RipR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_02560 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_22370 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGE_33980 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGE_10850 ugd; UDP-glucose 6-dehydrogenase Ugd K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGE_10870 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGE_17020 glf; UDP-galactopyranose mutase Glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RGE_03970 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGE_44030 phosphotransferase system, fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGE_08410 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGE_35090 algC; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RGE_10860 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGE_41450 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGE_41260 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGE_41600 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGE_41280 per; putative perosamine synthetase Per K13010 per; perosamine synthetase [EC:2.6.1.102]
D RGE_41610 fcl; GDP-L-fucose synthase Fcl K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RGE_34040 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RGE_29070 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rge00620]
D RGE_18530 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_18640 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_28660 porA; pyruvate ferredoxin oxidoreductase alpha subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RGE_28670 porB; pyruvate ferredoxin oxidoreductase beta subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RGE_28650 porC; pyruvate ferredoxin oxidoreductase gamma subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RGE_20970 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RGE_23650 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGE_18330 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGE_23660 aceF; dihydrolipoamide acetyltransferase AceF K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_05280 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGE_17490 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGE_38410 adhB; iron-containing alcohol dehydrogenase AdhB K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D RGE_11350 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGE_23040 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGE_09960 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_01430 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_03890 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_17520 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_35280 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_01420 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_03880 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_09970 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_22610 putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGE_04640 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGE_31620 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGE_42250 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGE_42260 accC; acetyl-CoA carboxylase, biotin carboxylase AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGE_12560 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGE_35630 NAD-dependent aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RGE_11660 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RGE_35540 lldD; L-lactate dehydrogenase cytochrome LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RGE_36540 lldA; L-lactate dehydrogenase LldA K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RGE_11300 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_26160 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_35530 dld; D-lactate dehydrogenase Dld K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D RGE_00660 putative oxidoreductase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RGE_12430 gloA; glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RGE_26740 glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RGE_34450 gloA; lactoylglutathione lyase GloA K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RGE_31020 glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RGE_32750 gloB; hydroxyacylglutathione hydrolase GloB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RGE_06510 putative hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RGE_45190 D-isomer specific 2-hydroxyacid dehydrogenase family protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RGE_23550 oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RGE_04630 maeB; malate dehydrogenase MaeB K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RGE_45250 maeB; malate dehydrogenase MaeB K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RGE_11560 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGE_21240 pyc; pyruvate carboxylase Pyc K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RGE_12240 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGE_18620 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RGE_28550 fumC; fumarate hydratase class II FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RGE_21280 frdA; fumarate reductase flavoprotein subunit FrdA K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGE_21270 frdB; fumarate reductase iron-sulfur subunit FrdB K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGE_21260 frdC; fumarate reductase subunit C FrdC K00246 frdC; succinate dehydrogenase subunit C
D RGE_21250 frdD; fumarate reductase subunit D FrdD K00247 frdD; succinate dehydrogenase subunit D
D RGE_36480 ppc; phosphoenolpyruvate carboxylase Ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGE_01070 pckG; phosphoenolpyruvate carboxykinase [GTP] PckG K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RGE_21180 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGE_27220 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGE_45930 glcB; malate synthase G GlcB K01638 aceB; malate synthase [EC:2.3.3.9]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_09780 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RGE_28030 leuA; 2-isopropylmalate synthase,LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RGE_43100 nifV; homocitrate synthase NifV K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rge00630]
D RGE_26170 aceA; isocitrate lyase aceA K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RGE_18530 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_18640 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_45930 glcB; malate synthase G GlcB K01638 aceB; malate synthase [EC:2.3.3.9]
D RGE_12240 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGE_12310 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D RGE_29810 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1]
D RGE_38310 acnA; aconitate hydrase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RGE_12220 acnB; aconitate hydrase 2 AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23770 phbB; acetoacetyl-CoA reductase PhbB K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RGE_12410 biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RGE_12400 accA; carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RGE_12380 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RGE_02000 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RGE_01990 glcE; glycolate oxidase, subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RGE_01970 glcF; glycolate oxidase iron-sulfur subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RGE_45190 D-isomer specific 2-hydroxyacid dehydrogenase family protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RGE_23550 oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RGE_03060 gph; phosphoglycolate phosphatase Gph K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGE_35990 cbbZ; phosphoglycolate phosphatase CbbZ K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGE_40890 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGE_36060 cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit CbbL K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RGE_36050 cbbS; ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit CbbS K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RGE_26250 puuA; glutamate--putrescine ligase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_26330 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_02450 methylserine aldolase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_38960 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_15940 gcvP; glycine dehydrogenase GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RGE_15960 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_15950 gcvH; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D RGE_00220 ttuD; putative hydroxypyruvate reductase TtuD K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGE_40160 yeaU; tartrate dehydrogenase YeaU K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D RGE_34460 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase Eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RGE_36630 fdsD; NAD-dependent formate dehydrogenase, delta subunit FdsD K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D RGE_11420 fdoG; formate dehydrogenase-O, major subunit, selenocysteine-containing FdoG K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGE_36640 fdsA; NAD-dependent formate dehydrogenase, alpha subunit FdsA K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGE_11410 fdoH; formate dehydrogenase-O, iron-sulfur subunit FdoH K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGE_36650 fdsB; NAD-dependent formate dehydrogenase, beta subunit FdsB K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGE_11400 fdoI; formate dehydrogenase-O, cytochrome b556 subunit FdoI K00127 fdoI; formate dehydrogenase subunit gamma
D RGE_36660 fdsG; NAD-dependent formate dehydrogenase, gamma subunit FdsG K00127 fdoI; formate dehydrogenase subunit gamma
D RGE_31070 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D RGE_13230 putative cyclase K07130 kynB; arylformamidase [EC:3.5.1.9]
D RGE_01580 purU; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RGE_20560 fmdA; formamidase FmdA K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D RGE_38140 hutG; N-formylglutamate deformylase HutG K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D RGE_16610 AMP-dependent synthetase and ligase K22133 AAE3; oxalate---CoA ligase [EC:6.2.1.8]
C 00640 Propanoate metabolism [PATH:rge00640]
D RGE_18530 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_18640 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_32650 prpE; propionate--CoA ligase PrpE K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RGE_09960 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_01430 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_03890 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_17520 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_35280 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_01420 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_03880 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_09970 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_28660 porA; pyruvate ferredoxin oxidoreductase alpha subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RGE_28670 porB; pyruvate ferredoxin oxidoreductase beta subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RGE_28650 porC; pyruvate ferredoxin oxidoreductase gamma subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RGE_05280 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGE_17490 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGE_21120 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RGE_32660 alcohol dehydrogenase, zinc-binding K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_31620 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGE_42250 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGE_42260 accC; acetyl-CoA carboxylase, biotin carboxylase AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGE_12560 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGE_26220 beta-alanine-pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGE_25310 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGE_12410 biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RGE_12400 accA; carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RGE_12380 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RGE_12340 sucC; succinyl-CoA ligase[ADP-forming] subunit bata SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGE_46570 sucC; succinyl-CoA ligase[ADP-forming] subunit bata SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGE_12330 sucD; succinyl-CoA ligase[ADP-forming] subunit alpha SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGE_46560 sucD; succinyl-CoA ligase[ADP-forming] subunit alpha SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGE_01150 mmsA; methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RGE_12220 acnB; aconitate hydrase 2 AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RGE_11300 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_26160 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:rge00650]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01500 paaH; 3-hydroxyacyl-CoA dehydrogenase PaaH K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RGE_09160 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGE_24380 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_06490 enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_21120 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RGE_09920 atoD; 3-oxoacid CoA-transferase, A subunit AtoD K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01400 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01260 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01270 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01410 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_09930 atoA; 3-oxoacid CoA-transferase, B subunit AtoA K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_23750 phbC; poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RGE_03900 phbC; putative poly-beta-hydroxybutyrate polymerase PhbC K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RGE_15370 phaZ; putative polyhydroxyalkanoate depolymerase PhaZ K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RGE_23770 phbB; acetoacetyl-CoA reductase PhbB K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RGE_11560 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGE_11570 sodium ion-translocating decarboxylase, biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGE_40160 yeaU; tartrate dehydrogenase YeaU K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D RGE_12280 sdhA; succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGE_12290 sdhB; succinate dehydrogenase iron-sulfur subunit SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGE_06500 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGE_12260 sdhC; succinate dehydrogenase cytochrome b556 subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGE_12270 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGE_21280 frdA; fumarate reductase flavoprotein subunit FrdA K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGE_21270 frdB; fumarate reductase iron-sulfur subunit FrdB K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGE_21260 frdC; fumarate reductase subunit C FrdC K00246 frdC; succinate dehydrogenase subunit C
D RGE_21250 frdD; fumarate reductase subunit D FrdD K00247 frdD; succinate dehydrogenase subunit D
D RGE_34990 gabD; succinate-semialdehyde dehydrogenase (NADP+) GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGE_11660 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RGE_26150 iron-containing alcohol dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D RGE_05280 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGE_17490 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGE_28660 porA; pyruvate ferredoxin oxidoreductase alpha subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RGE_28670 porB; pyruvate ferredoxin oxidoreductase beta subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RGE_28650 porC; pyruvate ferredoxin oxidoreductase gamma subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RGE_20970 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RGE_43400 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RGE_16080 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RGE_16090 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RGE_26860 bdhA; 3-hydroxybutyrate dehydrogenase BdhA K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RGE_43270 D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D RGE_28070 ilvI; acetolactate synthase large subunit IlvI/IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_37010 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_32390 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_28060 ilvH; acetolactate synthase small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rge00660]
D RGE_28070 ilvI; acetolactate synthase large subunit IlvI/IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_37010 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_32390 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_28060 ilvH; acetolactate synthase small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGE_12340 sucC; succinyl-CoA ligase[ADP-forming] subunit bata SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGE_46570 sucC; succinyl-CoA ligase[ADP-forming] subunit bata SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGE_12330 sucD; succinyl-CoA ligase[ADP-forming] subunit alpha SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGE_46560 sucD; succinyl-CoA ligase[ADP-forming] subunit alpha SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGE_12460 leuC; 3-isopropylmalate dehydratase large LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RGE_12480 leuD; 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RGE_12490 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rge00562]
D RGE_22010 plc; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RGE_15170 suhB; myo-inositol-1(or 4)-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RGE_30120 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D RGE_01150 mmsA; methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RGE_15550 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rge00190]
D RGE_15570 nuoA; NADH-quinone oxidoreductase, A subunit NuoA K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RGE_15580 nuoB; NADH-quinone oxidoreductase, B subunit NuoB K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RGE_15590 nuoC; NADH-quinone oxidoreductase, C subunit NuoC K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RGE_15600 nuoD; NADH-quinone oxidoreductase, D subunit NuoD K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RGE_15610 nuoE; NADH-quinone oxidoreductase, E subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RGE_15620 nuoF; NADH-quinone oxidoreductase, F subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RGE_15630 nuoG; NADH-quinone oxidoreductase, G subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RGE_15640 nuoH; NADH-quinone oxidoreductase, H subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RGE_15650 nuoI; NADH-quinone oxidoreductase, I subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RGE_15660 nuoJ; NADH-quinone oxidoreductase, J subunit NuoJ K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RGE_15670 nuoK; NADH-quinone oxidoreductase, K subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RGE_15680 nuoL; NADH-quinone oxidoreductase, L subunit NuoL K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RGE_15690 nuoM; NADH-quinone oxidoreductase, M subunit NuoM K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RGE_15700 nuoN; NADH-quinone oxidoreductase, N subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RGE_12280 sdhA; succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGE_12290 sdhB; succinate dehydrogenase iron-sulfur subunit SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGE_06500 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGE_12260 sdhC; succinate dehydrogenase cytochrome b556 subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGE_12270 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGE_21280 frdA; fumarate reductase flavoprotein subunit FrdA K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGE_21270 frdB; fumarate reductase iron-sulfur subunit FrdB K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGE_21260 frdC; fumarate reductase subunit C FrdC K00246 frdC; succinate dehydrogenase subunit C
D RGE_21250 frdD; fumarate reductase subunit D FrdD K00247 frdD; succinate dehydrogenase subunit D
D RGE_10480 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGE_21410 petA2; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA2 K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGE_10490 petB; cytochrome b PetB K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGE_10500 petC; cytochrome c1 PetC K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RGE_41780 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D RGE_41830 ctaE; cytochrome c oxidase subunit 3 CtaE K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RGE_41860 ctaD; cytochrome c oxidase subunit 1 CtaD K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RGE_41870 ctaC; cytochrome c oxidase subunit 2 CtaC K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RGE_41850 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RGE_41790 ctaA; cytochrome oxidase assembly CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGE_31930 ccoN; Cbb3-type cytochrome oxidase subunit 1 CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RGE_31920 ccoO; Cbb3-type cytochrome oxidase subunit 2 CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RGE_31910 ccoQ; Cbb3-type cytochrome oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RGE_31900 ccoP; Cbb3-type cytochrome oxidase subunit 3 CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RGE_20020 qoxA; cytochrome bd-type quinol oxidase subunit 1 QoxA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RGE_20030 qoxB; cytochrome bd-type quinol oxidase subunit 2 QoxB K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RGE_22050 putative cytochrome c-551 K08738 CYC; cytochrome c
D RGE_06590 nirM; cytochrome c551 NirM K08738 CYC; cytochrome c
D RGE_06670 cyc8H; high-potential cytochrome c8 K08738 CYC; cytochrome c
D RGE_33740 cyc8L; low-potential cytochrome c8 K08738 CYC; cytochrome c
D RGE_02250 atpA; ATP synthase subunit alpha AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RGE_02230 atpD; ATP synthase subunit beta AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RGE_02240 atpG; ATP synthase gamma chain AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RGE_02260 atpH; ATP synthase subunit delta AtpH K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RGE_02220 atpC; ATP synthase epsilon chain AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RGE_02290 atpB; ATP synthase subunit a AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGE_02270 atpF; ATP synthase subunit b AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGE_02280 atpE; ATP synthase subunit c AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RGE_28170 ppa; inorganic diphosphatase Ppa K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RGE_33850 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGE_33860 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGE_05000 putative polyphosphate kinase 2 family protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGE_02210 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:rge00710]
D RGE_36060 cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit CbbL K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RGE_36050 cbbS; ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit CbbS K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RGE_04620 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGE_44760 cbbG; glyceraldehyde-3-phosphate dehydrogenase CbbG K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGE_04650 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_35980 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_18460 cbbF; fructose-1,6-bisphosphatase CbbF K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGE_36020 cbbF; fructose-1,6-bisphosphatase CbbF K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGE_36000 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGE_44770 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGE_16160 rpiA; ribose-5-phosphate isomerase A RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RGE_36010 cbbP; phosphoribulokinase CbbP K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D RGE_15550 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGE_02940 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGE_36040 cbbE; ribulose-5-phosphate 3-epimerase CbbE K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGE_36480 ppc; phosphoenolpyruvate carboxylase Ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGE_21180 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGE_04630 maeB; malate dehydrogenase MaeB K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RGE_45250 maeB; malate dehydrogenase MaeB K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RGE_12240 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rge00680]
D RGE_23320 calcium incorporation protein MxaA K16256 mxaA; mxaA protein
D RGE_23310 von Willebrand factor, type A K16257 mxaC; mxaC protein
D RGE_23300 mxaK; putative MxaK-like protein K16258 mxaK; mxaK protein
D RGE_23290 mxaL; putative MxaL-like protein K16259 mxaL; mxaL protein
D RGE_40660 xoxF; methanol dehydrogenase-like protein XoxF K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D RGE_11350 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGE_11360 fghA; S-formylglutathione hydrolase FghA K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RGE_11420 fdoG; formate dehydrogenase-O, major subunit, selenocysteine-containing FdoG K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGE_36640 fdsA; NAD-dependent formate dehydrogenase, alpha subunit FdsA K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGE_11410 fdoH; formate dehydrogenase-O, iron-sulfur subunit FdoH K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGE_36650 fdsB; NAD-dependent formate dehydrogenase, beta subunit FdsB K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGE_11400 fdoI; formate dehydrogenase-O, cytochrome b556 subunit FdoI K00127 fdoI; formate dehydrogenase subunit gamma
D RGE_36660 fdsG; NAD-dependent formate dehydrogenase, gamma subunit FdsG K00127 fdoI; formate dehydrogenase subunit gamma
D RGE_36630 fdsD; NAD-dependent formate dehydrogenase, delta subunit FdsD K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D RGE_02450 methylserine aldolase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_38960 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_00220 ttuD; putative hydroxypyruvate reductase TtuD K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGE_14990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGE_36480 ppc; phosphoenolpyruvate carboxylase Ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGE_12240 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGE_04650 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_35980 cbbA; fructose-bisphosphate aldolase CbbA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGE_18460 cbbF; fructose-1,6-bisphosphatase CbbF K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGE_36020 cbbF; fructose-1,6-bisphosphatase CbbF K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGE_14210 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGE_07440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGE_40400 fhcA; formylmethanofuran dehydrogenase subunit A FhcA K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12]
D RGE_40380 fhcB; formylmethanofuran dehydrogenase subunit B FhcB K00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12]
D RGE_40420 fhcC; formylmethanofuran dehydrogenase subunit C FhcC K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12]
D RGE_40410 fhcD; formylmethanofuran--tetrahydromethanopterin N-formyltransferase FhcD K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]
D RGE_40250 mch; methenyltetrahydromethanopterin cyclohydrolase Mch K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
D RGE_14160 hypothetical protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D RGE_40230 mtdB; methylene tetrahydromethanopterin dehydrogenase MtdB K10714 mtdB; methylene-tetrahydromethanopterin dehydrogenase [EC:1.5.1.-]
D RGE_40280 fae; formaldehyde-activating enzyme Fae K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D RGE_40430 putative formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D RGE_09960 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_01430 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_03890 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_17520 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_35280 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_01420 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_03880 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_09970 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_18530 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_18640 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_28660 porA; pyruvate ferredoxin oxidoreductase alpha subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RGE_28670 porB; pyruvate ferredoxin oxidoreductase beta subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RGE_28650 porC; pyruvate ferredoxin oxidoreductase gamma subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RGE_27220 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGE_41950 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_44310 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_46250 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_32770 oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGE_11820 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGE_26930 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RGE_32950 thrH; phosphoserine--homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D RGE_40360 hypothetical protein K06914 mfnD; tyramine---L-glutamate ligase [EC:6.3.4.24]
D RGE_40330 hypothetical protein K09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153]
D RGE_40340 hypothetical protein K07144 mfnE; 5-(aminomethyl)-3-furanmethanol phosphate kinase [EC:2.7.4.31]
D RGE_40350 hypothetical protein K07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131]
C 00910 Nitrogen metabolism [PATH:rge00910]
D RGE_20560 fmdA; formamidase FmdA K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D RGE_06580 nirS; cytochrome cd1 nitrite reductase NirS K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D RGE_07190 norB; cytochrome b subunit of NO reductase, NorB K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D RGE_07200 norC; cytochrome c subunit of NO reductase, NorC K02305 norC; nitric oxide reductase subunit C
D RGE_19210 nosZ; nitrous oxide reductase, NosZ K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D RGE_42890 nifD; nitrogenase molybdenum-iron protein alpha chain NifD K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RGE_25450 nifK; putative nitrogenase molybdenum-iron protein beta chain NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RGE_42900 nifK; nitrogenase molybdenum-iron protein beta chain NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RGE_25430 nifH; nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
D RGE_42880 nifH; nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
D RGE_07410 putative nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RGE_25010 putative nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RGE_27780 putative nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RGE_00870 gdhA; glutamate dehydrogenase GdhA K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RGE_26250 puuA; glutamate--putrescine ligase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_26330 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_08280 gltB; NAD(P)H-dependent glutamate synthase large subunit GltB K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGE_08290 gltD; NAD(P)H-dependent glutamate synthase small subunit GltD K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGE_08870 arcC; carbamate kinase ArcC K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RGE_43540 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RGE_09430 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rge00920]
D RGE_46230 cysP; sulfate ABC transporter, periplasmic sulfate-binding protein CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RGE_46220 cysT; sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RGE_46210 cysW; sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RGE_46200 cysA; sulfate ABC transporter, ATPase subunit CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RGE_25320 tauA; taurine ABC transporter substrate binding protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RGE_25340 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D RGE_25330 tauB; taurine ABC transporter ATP binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RGE_25360 ssuA; putative aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_25390 ssuA; putative aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_01190 putative ABC transporter substrate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_25410 ssuC; aliphatic sulfonate ABC transporter, permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D RGE_01170 putative ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein
D RGE_25420 ssuB; aliphatic sulfonate import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGE_01180 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGE_25400 ssuD; alkanesulfonate monooxygenase SsuD K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D RGE_31270 cysNC; sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RGE_31260 cysD; sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGE_31250 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RGE_23440 cysH; phosphoadenosine phosphosulfate reductase CysH K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RGE_40580 SoxYZ family protein K17226 soxY; sulfur-oxidizing protein SoxY
D RGE_29710 SoxYZ family protein K17226 soxY; sulfur-oxidizing protein SoxY
D RGE_28960 soxY; putative sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D RGE_20260 soxY; sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D RGE_20270 soxZ; sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D RGE_28950 soxZ; sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D RGE_23460 cysI; sulfite reductase (NADPH) hemoprotein beta-component CysI K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RGE_20240 soxF; flavocytochrome c flavin subunit SoxF K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RGE_28930 flavocytochrome c flavin subunit K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RGE_20230 putative cytochrome c K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D RGE_28920 soxE; putative sulfide dehydrogenase (flavocytochrome), cytochrome c subunit SoxE K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D RGE_16640 putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGE_20110 cysE; serine O-acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGE_15190 cysE; serine O-acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGE_09410 cysK; cysteine synthase A CysK K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGE_20100 cysK; cysteine synthase A CysK K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGE_45380 metX; homoserine O-acetyltransferase MetX K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RGE_12610 metZ; O-succinylhomoserine sulfhydrylase MetZ K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RGE_20320 dmsA; dimethylsulfoxide (DMSO) reductase, A subunit DmsA K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D RGE_20310 dmsB; dimethylsulfoxide (DMSO) reductase, B subunit DmsB K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D RGE_20300 dmsC; dimethylsulfoxide (DMSO) reductase, C subunit DmsC K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D RGE_15970 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RGE_39930 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RGE_27790 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RGE_09140 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rge00061]
D RGE_31620 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGE_42250 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGE_42260 accC; acetyl-CoA carboxylase, biotin carboxylase AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGE_12560 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGE_17270 acyl carrier protein K02078 acpP; acyl carrier protein
D RGE_41100 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein
D RGE_41120 fabD; malonyl CoA-acyl carrier protein transacylase, FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGE_41130 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3, FabH K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RGE_17260 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGE_41090 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II, FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGE_21750 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_29640 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_41110 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase, FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_42180 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_41310 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_09700 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_29800 short-chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_27280 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGE_28280 fabI; enoyl-[acyl-carrier-protein] reductase, FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGE_06000 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30260 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_03600 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_07750 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46110 fadD; long-chain-fatty-acid-CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46900 putative long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30240 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rge00071]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_09170 fadA; thiolase family protein FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_09160 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGE_24380 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGE_21120 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RGE_29230 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGE_21100 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGE_23920 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RGE_06000 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30260 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_03600 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_07750 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46110 fadD; long-chain-fatty-acid-CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46900 putative long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30240 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_11350 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGE_38410 adhB; iron-containing alcohol dehydrogenase AdhB K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rge00561]
D RGE_00220 ttuD; putative hydroxypyruvate reductase TtuD K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGE_23040 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGE_01930 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGE_41140 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RGE_18580 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGE_41980 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGE_43640 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGE_28120 dgkA; diacylglycerol kinase DgkA K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RGE_07320 acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RGE_08500 diacylglycerol O-acyltransferase, putative K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RGE_07330 acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RGE_00190 lipA; lactonizing lipase LipA K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D RGE_43980 hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:rge00564]
D RGE_41910 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) GpsA K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RGE_02320 glpD; putative glycerol-3-phosphate dehydrogenase GlpD K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RGE_18580 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGE_41980 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGE_43640 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGE_41190 tagD; glycerol-3-phosphate cytidylyltransferase TagD K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D RGE_28120 dgkA; diacylglycerol kinase DgkA K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RGE_22010 plc; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RGE_10060 pldA; phospholipase A1 PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RGE_09850 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RGE_10590 ugpQ; cytoplasmic glycerophosphoryl diester phosphodiesterase UgpQ K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RGE_14730 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RGE_45410 eutB; ethanolamine ammonia-lyase, large subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D RGE_45420 eutC; ethanolamine ammonia-lyase small subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D RGE_10190 phosphatidate cytidylyltransferase, putative K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RGE_27340 cdsA; phosphatidate cytidylyltransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RGE_21870 pssA; phosphatidylserine synthase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGE_28040 pssA; phosphatidylserine synthase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGE_40860 psd; phosphatidylserine decarboxylase proenzyme Psd K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RGE_45210 pgpA; phosphatidylglycerophosphatase A PgpA K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RGE_25110 cls; putative cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RGE_28570 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RGE_10990 cls; putative cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RGE_03770 ybhO; putative cardiolipin synthetase YbhO K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RGE_16240 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism [PATH:rge00565]
D RGE_10060 pldA; phospholipase A1 PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RGE_22010 plc; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D RGE_10060 pldA; phospholipase A1 PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D RGE_10060 pldA; phospholipase A1 PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:rge00592]
D RGE_10060 pldA; phospholipase A1 PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RGE_09170 fadA; thiolase family protein FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rge01040]
D RGE_34180 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RGE_24150 esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RGE_09280 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rge00230]
D RGE_15710 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RGE_22370 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGE_08710 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGE_41960 putative ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGE_12600 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RGE_38530 purD; phosphoribosylamine--glycine ligase PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RGE_34200 purN; phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RGE_05030 purT; phosphoribosylglycinamide formyltransferase 2 PurT K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D RGE_23840 purL; phosphoribosylformylglycinamidine synthase PurL K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RGE_33010 purM; putative phosphoribosylformylglycinamidine cyclo-ligase PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RGE_04690 purK; 5-(carboxyamino)imidazole ribonucleotide synthase PurK K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RGE_04680 purE; 5-(carboxyamino)imidazole ribonucleotide mutase PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RGE_04660 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RGE_45860 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RGE_10210 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGE_47000 apt; adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RGE_07790 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RGE_45750 5'-nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RGE_05350 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RGE_33360 surE; stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGE_45580 punA; purine nucleoside phosphorylase PunA K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RGE_23730 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RGE_30970 guaB; inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RGE_27600 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGE_35470 nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RGE_39970 xdhA; xanthine dehydrogenase small subunit XdhA K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D RGE_39960 xdhB; xanthine dehydrogenase large subunit XdhB K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D RGE_30950 guaA; GMP synthase (glutamine-hydrolyzing) GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGE_26180 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGE_33930 guaC; GMP reductase GuaC K00364 guaC; GMP reductase [EC:1.7.1.7]
D RGE_39980 guaD; guanine deaminase GuaD K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RGE_35660 gmk; guanylate kinase Gmk K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RGE_23000 nrdJ; vitamin B12-dependent ribonucleoside-diphosphate reductase NrdJ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGE_42320 nrdA; ribonucleoside-diphosphate reductase, alpha subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGE_42310 nrdB; ribonucleoside-diphosphate reductase, beta subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RGE_03830 nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RGE_08260 dgt; putative deoxyguanosinetriphosphate triphosphohydrolase Dgt K01129 dgt; dGTPase [EC:3.1.5.1]
D RGE_20350 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RGE_35700 spoT; GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate) 3'-pyrophosphohydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGE_33830 ppx; exopolyphosphatase Ppx K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RGE_26840 relA; GTP pyrophosphokinase RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D RGE_27070 putative AMP or GMP cyclase containing FHA domain K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RGE_27450 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGE_42290 adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D RGE_45520 add; adenosine deaminase Add K01488 add; adenosine deaminase [EC:3.5.4.4]
D RGE_43800 amn; AMP nucleosidase Amn K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D RGE_39460 add; adenosine deaminase Add K21053 ade; adenine deaminase [EC:3.5.4.2]
D RGE_32330 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CpdB K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RGE_32030 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D RGE_18220 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D RGE_31270 cysNC; sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RGE_31260 cysD; sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGE_39870 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RGE_43630 hyuE; putative hydantoin racemase HyuE K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RGE_39850 putative hydrolase K16842 hpxB; allantoinase [EC:3.5.2.5]
D RGE_40090 ureC; urease subunit alpha UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGE_40080 ureB; urease subunit beta UreB K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGE_40070 ureA; urease subunit gamma UreA K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RGE_08870 arcC; carbamate kinase ArcC K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:rge00240]
D RGE_33290 carB; carbamoyl-phosphate synthase large chain CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGE_33300 carA; carbamoyl-phosphate synthetase subunit A CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGE_42000 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RGE_09370 pyrC; dihydroorotase PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RGE_41990 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RGE_16150 pyrD; dihydroorotate dehydrogenase PyrD K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RGE_46720 pyrE; orotate phosphoribosyltransferase PyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RGE_45870 pyrF; orotidine 5'-phosphate decarboxylase PyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RGE_27370 pyrH; uridylate kinase PyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RGE_27600 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGE_38480 hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RGE_38390 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D RGE_15020 pyrG; CTP synthase PyrG K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RGE_07790 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RGE_45750 5'-nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RGE_05350 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RGE_33360 surE; stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGE_32780 upp; uracil phosphoribosyltransferase Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RGE_45450 upp; uracil phosphoribosyltransferase Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RGE_42010 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RGE_32330 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CpdB K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RGE_11860 cytidine deaminase-like protein K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RGE_45570 cdd; cytidine deaminase Cdd K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RGE_45440 codA; cytosine deaminase CodA K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RGE_03830 nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RGE_36560 dcd; deoxycytidine triphosphate deaminase Dcd K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RGE_23000 nrdJ; vitamin B12-dependent ribonucleoside-diphosphate reductase NrdJ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGE_42320 nrdA; ribonucleoside-diphosphate reductase, alpha subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGE_42310 nrdB; ribonucleoside-diphosphate reductase, beta subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RGE_20350 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RGE_26090 tmk; thymidylate kinase Tmk K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RGE_34870 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGE_41970 deoA; putative thymidine phosphorylase DeoA K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RGE_45760 deoA; thymidine phosphorylase DeoA K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RGE_14480 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RGE_29970 putative methyltransferase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RGE_39840 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline decarboxylase/L-carbamoylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RGE_10000 N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RGE_36840 rutE; putative NADH dehydrogenase/NAD(P)H nitroreductase RutE K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rge00250]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_32460 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RGE_23980 ansB; L-asparaginase, type II AnsB K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RGE_06970 putative asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGE_04200 asnB; asparagine synthase AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGE_04290 putative asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGE_04450 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGE_32600 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RGE_11760 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGE_36510 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGE_27450 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGE_45860 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RGE_42000 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RGE_34990 gabD; succinate-semialdehyde dehydrogenase (NADP+) GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGE_08280 gltB; NAD(P)H-dependent glutamate synthase large subunit GltB K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGE_08290 gltD; NAD(P)H-dependent glutamate synthase small subunit GltD K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGE_00870 gdhA; glutamate dehydrogenase GdhA K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RGE_00830 putA; proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RGE_26250 puuA; glutamate--putrescine ligase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_26330 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_33290 carB; carbamoyl-phosphate synthase large chain CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGE_33300 carA; carbamoyl-phosphate synthetase subunit A CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGE_05180 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGE_12600 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rge00260]
D RGE_31600 lysC; aspartokinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGE_12500 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGE_32590 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGE_33890 thrB; homoserine kinase ThrB K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D RGE_32950 thrH; phosphoserine--homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D RGE_32580 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D RGE_36580 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RGE_02450 methylserine aldolase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_38960 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_45190 D-isomer specific 2-hydroxyacid dehydrogenase family protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RGE_23550 oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RGE_00220 ttuD; putative hydroxypyruvate reductase TtuD K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGE_41950 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_44310 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_46250 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_32770 oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGE_11820 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGE_26930 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RGE_15940 gcvP; glycine dehydrogenase GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RGE_15960 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_15950 gcvH; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D RGE_21870 pssA; phosphatidylserine synthase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGE_28040 pssA; phosphatidylserine synthase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGE_20080 cbs; cystathionine beta-synthase Cbs K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RGE_20070 metB; cystathionine gamma-lyase MetB K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RGE_07090 sdaA; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGE_15930 sdaA; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGE_08060 ilvA; threonine dehydratase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGE_13660 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGE_00690 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGE_37150 hypothetical protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D RGE_30070 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RGE_12550 trpA; tryptophan synthase alpha chain TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RGE_12540 trpB; tryptophan synthase beta chain TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGE_26940 putative tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rge00270]
D RGE_20110 cysE; serine O-acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGE_15190 cysE; serine O-acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGE_09410 cysK; cysteine synthase A CysK K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGE_20100 cysK; cysteine synthase A CysK K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGE_20070 metB; cystathionine gamma-lyase MetB K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RGE_31040 metC; cystathionine beta-lyase MetC K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGE_20080 cbs; cystathionine beta-synthase Cbs K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RGE_11490 mmuM; homocysteine S-methyltransferase MmuM K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D RGE_02540 metH; cobalamin-dependent methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGE_02080 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGE_05090 metK; S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGE_22550 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D RGE_37030 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RGE_26380 mtaP; methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D RGE_23730 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RGE_26370 mtnA; putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase MtnA K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D RGE_20920 mtnD; putative acireductone dioxygenase (Ni2+ or Fe2+-requiring) MtnD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D RGE_01740 tyrB; aromatic amino acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_15380 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_04990 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGE_31600 lysC; aspartokinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGE_12500 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGE_32590 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGE_45380 metX; homoserine O-acetyltransferase MetX K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RGE_19910 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RGE_15820 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RGE_12610 metZ; O-succinylhomoserine sulfhydrylase MetZ K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RGE_01640 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_12190 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_14320 gshA; glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RGE_02490 gshA; glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RGE_02460 gshB; glutathione synthetase GshB K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_16640 putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGE_11300 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_26160 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_30070 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RGE_12240 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGE_25200 putative malate/L-lactate dehydrogenase K16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338]
D RGE_25220 hypothetical protein K16845 suyA; (2R)-sulfolactate sulfo-lyase subunit alpha [EC:4.4.1.24]
D RGE_25210 suyB; sulfolactate sulfo-lyase large subunit SuyB K16846 suyB; (2R)-sulfolactate sulfo-lyase subunit beta [EC:4.4.1.24]
D RGE_07090 sdaA; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGE_15930 sdaA; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGE_34010 cysM; cysteine synthase B CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D RGE_32770 oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGE_11820 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rge00280]
D RGE_01640 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_12190 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_21120 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RGE_29230 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGE_21100 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGE_43550 ivd; putative isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_09170 fadA; thiolase family protein FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGE_12410 biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RGE_12400 accA; carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RGE_12380 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RGE_00760 garR; 2-hydroxy-3-oxopropionate reductase GarR K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RGE_01150 mmsA; methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RGE_43290 AMP-dependent synthetase and ligase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RGE_26220 beta-alanine-pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGE_25310 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGE_43410 mccA; 3-methylcrotonoyl-CoA carboxylase, alpha subunit MccA K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RGE_43450 carboxyl transferase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RGE_43430 enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RGE_43400 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RGE_16080 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RGE_16090 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rge00290]
D RGE_08060 ilvA; threonine dehydratase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGE_13660 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGE_00690 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGE_12460 leuC; 3-isopropylmalate dehydratase large LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RGE_12480 leuD; 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RGE_12490 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RGE_28070 ilvI; acetolactate synthase large subunit IlvI/IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_37010 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_32390 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_28060 ilvH; acetolactate synthase small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGE_28050 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RGE_17640 ilvD; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGE_01640 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_12190 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_32600 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RGE_09780 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RGE_28030 leuA; 2-isopropylmalate synthase,LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rge00300]
D RGE_32590 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGE_31600 lysC; aspartokinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGE_12500 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGE_05250 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGE_34810 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGE_45130 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RGE_24050 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RGE_13330 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGE_37050 aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGE_24060 dapC; acetylornithine/succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RGE_19020 peptidase M20A family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RGE_24030 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RGE_05120 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGE_08130 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGE_02400 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RGE_09500 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGE_09490 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase MurE K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
C 00310 Lysine degradation [PATH:rge00310]
D RGE_27740 odhB; 2-oxoglutarate dehydrogenase E2 component OdhB K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_23920 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_30070 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RGE_34990 gabD; succinate-semialdehyde dehydrogenase (NADP+) GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGE_44040 L-carnitine dehydratase/bile acid-inducible protein F K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D RGE_01310 hypothetical protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D RGE_32910 hypothetical protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D RGE_09920 atoD; 3-oxoacid CoA-transferase, A subunit AtoD K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01400 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01260 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01270 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01410 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_09930 atoA; 3-oxoacid CoA-transferase, B subunit AtoA K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_44090 putative aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:rge00220]
D RGE_13320 argF; ornithine carbamoyltransferase ArgF K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RGE_11760 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGE_36510 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGE_20600 rocF; arginase RocF K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RGE_37670 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RGE_40090 ureC; urease subunit alpha UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGE_40080 ureB; urease subunit beta UreB K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGE_40070 ureA; urease subunit gamma UreA K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RGE_26250 puuA; glutamate--putrescine ligase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_26330 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_00870 gdhA; glutamate dehydrogenase GdhA K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RGE_08870 arcC; carbamate kinase ArcC K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_32600 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RGE_26990 argA; amino-acid acetyltransferase ArgA K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RGE_10570 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RGE_10290 argB; acetylglutamate kinase ArgB K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RGE_00600 argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RGE_13330 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGE_37050 aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGE_13650 argE; acetylornithine deacetylase ArgE K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rge00330]
D RGE_45440 codA; cytosine deaminase CodA K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RGE_28290 orn/lys/arg decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D RGE_26190 speB; agmatinase SpeB K01480 speB; agmatinase [EC:3.5.3.11]
D RGE_22550 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D RGE_26260 spuC; putative aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RGE_05530 hypothetical protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D RGE_26320 aldH; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase AldH K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D RGE_07010 putative amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGE_46080 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGE_26230 puuB; gamma-glutamylputrescine oxidoreductase PuuB K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D RGE_20600 rocF; arginase RocF K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RGE_37670 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RGE_14870 argD; acetylornithine aminotransferase ArgD K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RGE_00970 proC; pyrroline-5-carboxylate reductase ProC K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RGE_00830 putA; proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RGE_42520 proB; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RGE_44680 proA; glutamate-5-semialdehyde dehydrogenase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RGE_40510 pip; proline iminopeptidase Pip K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RGE_13160 putative prolyl 4-hydroxylase alpha subunit homologue oxidoreductase protein K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_44090 putative aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:rge00340]
D RGE_08580 hisG; ATP phosphoribosyltransferase HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RGE_27460 hisZ; ATP phosphoribosyltransferase regulatory subunit HisZ K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RGE_10370 hisE; phosphoribosyl-ATP pyrophosphatase HisE K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RGE_10360 hisI; phosphoribosyl-AMP cyclohydrolase HisI K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RGE_08630 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RGE_08620 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RGE_08640 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RGE_08610 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RGE_08600 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_25530 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_28890 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_08590 hisD; histidinol dehydrogenase HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RGE_38090 hutH; histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RGE_38100 hutU; urocanate hydratase HutU K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RGE_38130 hutI; imidazolonepropionase HutI K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RGE_38150 hutF; formiminoglutamate deiminase HutF K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D RGE_38140 hutG; N-formylglutamate deformylase HutG K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D RGE_00420 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:rge00350]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_08600 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_25530 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_28890 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_01740 tyrB; aromatic amino acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_15380 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_06290 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RGE_23720 maiA; putative maleylacetoacetate isomerase MaiA K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D RGE_26760 putative fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RGE_02050 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D RGE_11350 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGE_38410 adhB; iron-containing alcohol dehydrogenase AdhB K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D RGE_34990 gabD; succinate-semialdehyde dehydrogenase (NADP+) GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGE_20590 tnaA; tryptophanase TnaA K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
D RGE_23710 putative isomerase/hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rge00360]
D RGE_43970 phhA; phenylalanine-4-hydroxylase PhhA K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RGE_20930 paaK; phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_01500 paaH; 3-hydroxyacyl-CoA dehydrogenase PaaH K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_08600 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_25530 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_28890 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_01740 tyrB; aromatic amino acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_15380 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_34900 putative N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D RGE_06290 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RGE_27410 dadA; putative D-amino acid dehydrogenase, small subunit DadA K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RGE_34770 dadA; D-amino acid dehydrogenase small subunit DadA K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RGE_44090 putative aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RGE_35290 katG; peroxidase/catalase KatG K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RGE_07010 putative amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGE_46080 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:rge00380]
D RGE_31070 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D RGE_13230 putative cyclase K07130 kynB; arylformamidase [EC:3.5.1.9]
D RGE_13220 kynU; kynureninase KynU K01556 KYNU; kynureninase [EC:3.7.1.3]
D RGE_27740 odhB; 2-oxoglutarate dehydrogenase E2 component OdhB K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_23920 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_07010 putative amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGE_46080 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGE_35290 katG; peroxidase/catalase KatG K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rge00400]
D RGE_10960 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGE_00680 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGE_08250 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RGE_14310 aroQ; 3-dehydroquinate dehydratase AroQ K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RGE_42210 aroE; shikimate dehydrogenase AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RGE_08240 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RGE_13880 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RGE_15840 aroC; chorismate synthase AroC K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RGE_03080 trpE; anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGE_03090 trpG; anthranilate synthase component II TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RGE_03100 trpD; anthranilate phosphoribosyltransferase TrpD K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RGE_12530 trpF; N-(5'-phosphoribosyl) anthranilate isomerase TrpF K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RGE_45770 trpF; putative N-(5'phosphoribosyl)anthranilate isomerase TrpF K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RGE_03110 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RGE_12550 trpA; tryptophan synthase alpha chain TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RGE_12540 trpB; tryptophan synthase beta chain TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGE_26940 putative tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGE_13900 pheA; chorismate mutase/prephenate dehydratase PheA K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RGE_13890 tyrA; prephenate dehydrogenase TyrA K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_08600 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_25530 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_28890 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_01740 tyrB; aromatic amino acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_15380 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_43970 phhA; phenylalanine-4-hydroxylase PhhA K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RGE_38580 endoribonuclease L-PSP K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rge00410]
D RGE_05530 hypothetical protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D RGE_19410 panC; pantothenate synthetase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RGE_39840 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline decarboxylase/L-carbamoylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RGE_10000 N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RGE_26220 beta-alanine-pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGE_25310 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_21120 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RGE_01150 mmsA; methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rge00430]
D RGE_21730 acyI; acylase Acy 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGE_37500 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGE_25300 xsc; sulfoacetaldehyde acetyltransferase Xsc K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D RGE_35280 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_01420 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_03880 phosphate acetyl/butyryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_09970 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGE_09960 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_01430 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_03890 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGE_17520 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:rge00440]
D RGE_31440 phnX; phosphonoacetaldehyde hydrolase PhnX K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D RGE_31460 phnW; 2-aminoethylphosphonate-pyruvate transaminase PhnW K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:rge00450]
D RGE_31040 metC; cystathionine beta-lyase MetC K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGE_02540 metH; cobalamin-dependent methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGE_02080 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGE_20070 metB; cystathionine gamma-lyase MetB K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RGE_19940 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RGE_23410 putative oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RGE_34150 trxB; thioredoxin reductase TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RGE_31270 cysNC; sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RGE_31260 cysD; sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGE_03920 selD; selenophosphate synthase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RGE_11380 selA; L-seryl-tRNA(Ser) selenium transferase SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RGE_36710 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rge00460]
D RGE_21730 acyI; acylase Acy 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGE_37500 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGE_23980 ansB; L-asparaginase, type II AnsB K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RGE_02450 methylserine aldolase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_38960 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_20560 fmdA; formamidase FmdA K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:rge00470]
D RGE_01690 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D RGE_44090 putative aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RGE_09560 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGE_30070 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RGE_28850 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3]
D RGE_09520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGE_26790 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D RGE_26780 putative mandelate racemase/muconate lactonizing enzyme family protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RGE_06700 menC; O-succinylbenzoate synthase MenC K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RGE_37150 hypothetical protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D RGE_05120 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGE_08130 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGE_37740 putative oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D RGE_27410 dadA; putative D-amino acid dehydrogenase, small subunit DadA K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RGE_34770 dadA; D-amino acid dehydrogenase small subunit DadA K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rge00480]
D RGE_21730 acyI; acylase Acy 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGE_37500 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGE_34480 hypothetical protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D RGE_39170 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D RGE_02900 ybdK; carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RGE_14320 gshA; glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RGE_02490 gshA; glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RGE_02460 gshB; glutathione synthetase GshB K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RGE_18260 putative M17 family peptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGE_29140 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGE_18470 pepN; aminopeptidase N PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RGE_16060 glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGE_12120 glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGE_45430 glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGE_04890 glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGE_31820 icd; isocitrate dehydrogenase [NADP] Icd K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGE_08370 zwf; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGE_01730 bsaA; glutathione peroxidase BsaA K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RGE_03390 peroxiredoxin-2E-1 like protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RGE_22550 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rge00540]
D RGE_27270 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RGE_10100 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RGE_27290 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RGE_31680 lpxH; UDP-2,3-diacylglucosamine hydrolase LpxH K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RGE_27260 lpxB; lipid-A-disaccharide synthase LpxB K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RGE_32000 lpxK; tetraacyldisaccharide 4'-kinase LpxK K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RGE_46980 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RGE_15010 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase KdsA K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RGE_46970 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RGE_32020 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RGE_35080 waaA; 3-deoxy-D-manno-octulosonic-acid transferase WaaA K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RGE_05100 putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGE_05110 putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGE_23080 putative transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGE_39150 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGE_13720 gmhA; phosphoheptose isomerase GmhA K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RGE_00740 gmhA; phosphoheptose isomerase GmhA K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RGE_13730 rfaE; D-alpha,beta-D-heptose 7-phosphate 1-kinase RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RGE_13750 gmhB; D,D-heptose 1,7-bisphosphate phosphatase GmhB K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RGE_43650 gmhB; D,D-heptose 1,7-bisphosphate phosphatase GmhB K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RGE_24880 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RGE_13740 RfaE bifunctional protein, domain II K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RGE_13820 lipopolysaccharide heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RGE_13770 glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rge00541]
D RGE_33980 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGE_10870 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGE_17020 glf; UDP-galactopyranose mutase Glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RGE_10850 ugd; UDP-glucose 6-dehydrogenase Ugd K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGE_03970 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGE_41420 rmlA; glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGE_41440 rlmB; dTDP-glucose 4,6-dehydratase RlmB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGE_41410 rmlC; dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGE_41430 rmlD; dTDP-4-dehydrorhamnose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RGE_34040 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RGE_10860 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGE_41450 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGE_35090 algC; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RGE_41260 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGE_41600 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGE_41610 fcl; GDP-L-fucose synthase Fcl K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RGE_41280 per; putative perosamine synthetase Per K13010 per; perosamine synthetase [EC:2.6.1.102]
D RGE_04800 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RGE_04130 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RGE_04180 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase WecC K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RGE_41570 bplA; putative oxidoreductase BplA/WlbA K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RGE_41550 putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D RGE_41560 wbpD; similar to bacterial transferase hexapeptide K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:rge00550]
D RGE_08570 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGE_14110 murB; UDP-N-acetylmuramate dehydrogenase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGE_09550 murC; UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RGE_09520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGE_09560 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGE_09500 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGE_09490 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase MurE K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
D RGE_27350 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGE_13090 putative undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_35030 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_24940 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_09510 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGE_09540 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGE_42220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGE_08160 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGE_12210 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGE_46640 mrdA; penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGE_09480 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGE_44100 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGE_04750 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rge00552]
D RGE_13090 putative undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_35030 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_24940 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_10830 UDP-N-acetyl-D-mannosaminuronic acid transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RGE_13790 putative LicD-family phosphotransferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rge00543]
D RGE_10770 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RGE_04160 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RGE_05590 N-glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D RGE_20110 cysE; serine O-acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGE_15190 cysE; serine O-acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGE_10800 glycosyl transferase, group 1 K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rge00730]
D RGE_35570 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RGE_42130 phosphomethylpyrimidine kinase type-1 K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RGE_41680 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RGE_15420 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_42750 nifS; nitrogenase metalloclusters biosynthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_43040 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_16690 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGE_41700 thiM; hydroxyethylthiazole kinase ThiM K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RGE_41690 thiE; thiamine-phosphate pyrophosphorylase ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RGE_45220 thiL; thiamine-monophosphate kinase ThiL K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RGE_14270 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RGE_13530 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RGE_05880 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_39570 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_32030 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rge00740]
D RGE_39060 ribBA; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein RibB/RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RGE_39040 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RGE_09730 ribD; bifunctional deaminase-reductase domain protein RibD K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302]
D RGE_24460 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase RibB K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D RGE_39070 ribH; 6,7-dimethyl-8-ribityllumazine synthase RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RGE_11750 ribE; riboflavin synthase alpha chain RibE K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RGE_14040 putative riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RGE_38910 putative cob(II)yrinic acid a,c-diamide reductase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RGE_41700 thiM; hydroxyethylthiazole kinase ThiM K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RGE_15710 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RGE_42480 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rge00750]
D RGE_34500 pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase PdxH K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RGE_41590 pyridoxamine 5'-phosphate oxidase-related, FMN-binding K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RGE_11820 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGE_10450 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RGE_40960 pdxJ; pyridoxine 5'-phosphate synthase PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RGE_32580 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rge00760]
D RGE_32460 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RGE_32420 nadA; quinolinate synthetase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RGE_32430 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) NadC K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RGE_36310 pncB; nicotinate phosphoribosyltransferase PncB K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RGE_45580 punA; purine nucleoside phosphorylase PunA K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RGE_07790 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RGE_45750 5'-nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RGE_05350 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RGE_33360 surE; stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGE_38510 nadD; nicotinate-nucleotide adenylyltransferase NadD K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RGE_28150 nadE; NAD synthetase NadE K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RGE_45200 CinA domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RGE_12800 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RGE_08810 ppnK; putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RGE_01330 pntA; NAD(P) transhydrogenase, alpha subunit part 1 PntAA K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RGE_01340 pntAB; NAD(P) transhydrogenase, alpha subunit part 2 pntAB K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RGE_46130 pntAB; NAD(P) transhydrogenase, alpha subunit part 2 pntAB K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RGE_46140 pntAA; NAD(P) transhydrogenase, alpha subunit part 1 PntAA K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RGE_01350 pntB; NAD(P) transhydrogenase, beta subunit PntB K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RGE_46120 pntB; NAD(P) transhydrogenase, beta subunit PntB K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RGE_34990 gabD; succinate-semialdehyde dehydrogenase (NADP+) GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rge00770]
D RGE_28070 ilvI; acetolactate synthase large subunit IlvI/IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_37010 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_32390 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGE_28060 ilvH; acetolactate synthase small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGE_28050 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RGE_17640 ilvD; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGE_19400 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RGE_20740 apbA; 2-dehydropantoate 2-reductase ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RGE_16620 apbA; 2-dehydropantoate 2-reductase ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RGE_28980 apbA; 2-dehydropantoate 2-reductase ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RGE_19410 panC; pantothenate synthetase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RGE_43750 coaX; type III pantothenate kinase CoaX K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RGE_34880 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase CoaB/CoaC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RGE_08660 kdtB; pantetheine-phosphate adenylyltransferase KdtB K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RGE_42640 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RGE_40950 acpS; holo-[acyl-carrier-protein] synthase AcpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RGE_01640 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_12190 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_39840 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline decarboxylase/L-carbamoylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RGE_10000 N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:rge00780]
D RGE_41880 bioC; putative biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RGE_17260 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGE_41090 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II, FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGE_21750 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_29640 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_41110 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase, FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_42180 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_41310 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_09700 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_29800 short-chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_27280 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGE_28280 fabI; enoyl-[acyl-carrier-protein] reductase, FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGE_12420 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D RGE_44740 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rge00785]
D RGE_44070 lipB; lipoyltransferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RGE_44060 lipA; lipoyl synthase LipA K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_23650 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGE_18330 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGE_23660 aceF; dihydrolipoamide acetyltransferase AceF K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGE_27750 odhA; 2-oxoglutarate dehydrogenase E1 component OdhA K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RGE_27740 odhB; 2-oxoglutarate dehydrogenase E2 component OdhB K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGE_15940 gcvP; glycine dehydrogenase GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RGE_15960 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RGE_15950 gcvH; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rge00790]
D RGE_44650 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RGE_16700 hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D RGE_05880 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_39570 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_10970 ntpA; dATP pyrophosphohydrolase NtpA K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D RGE_04840 folB; dihydroneopterin aldolase, putative FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RGE_40290 folB; dihydroneopterin aldolase, putative FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RGE_13410 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RGE_33220 folP; dihydropteroate synthase FolP K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RGE_14470 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RGE_12570 folC; bifunctional folylpolyglutamate synthase and dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RGE_39060 ribBA; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein RibB/RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RGE_40440 putative aminotransferase family protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RGE_40210 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RGE_43970 phhA; phenylalanine-4-hydroxylase PhhA K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RGE_00120 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RGE_24090 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RGE_40220 mptG; beta-ribofuranosylaminobenzene 5'-phosphate synthase MptG K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D RGE_40310 putative flavoprotein K18853 dmrX; dihydromethanopterin reductase (acceptor) [EC:1.5.99.15]
D RGE_40260 rimK; ribosomal protein S6 modification protein RimK K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D RGE_32680 moaA; molybdenum cofactor biosynthesis protein A MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RGE_46440 moaC; molybdopterin cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RGE_32550 moaE; molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RGE_15200 mogA; molybdopterin biosynthesis protein Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RGE_32570 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RGE_32700 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RGE_34490 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D RGE_32690 mobA; putative molybdopterin-guanine dinucleotide biosynthesis protein A MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rge00670]
D RGE_14470 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RGE_29000 fhs; formate-tetrahydrofolate ligase Fhs K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RGE_23620 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RGE_02450 methylserine aldolase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_38960 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGE_34200 purN; phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RGE_10210 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGE_04570 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RGE_15960 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RGE_02540 metH; cobalamin-dependent methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGE_02080 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGE_14480 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RGE_29970 putative methyltransferase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RGE_01580 purU; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RGE_04980 metF; methylenetetrahydrofolate reductase MetF K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RGE_04950 ygfA; uncharacterized protein YgfA K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rge00860]
D RGE_12620 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGE_42430 hemA; glutamyl-tRNA reductase HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RGE_11180 hemL; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RGE_42140 hemL; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RGE_44150 hemB; porphobilinogen synthase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RGE_36470 hemC; porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RGE_36460 hemD; uroporphyrinogen-III synthase HemD K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RGE_02140 hemE; uroporphyrinogen decarboxylase HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RGE_38520 hemF; coproporphyrinogen III oxidase, aerobic HemF K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RGE_31850 hemN; oxygen-independent coproporphyrinogen III oxidase HemN K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RGE_33780 HemN C-terminal domain containing protein K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RGE_44140 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RGE_27090 hemH; ferrochelatase HemH K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RGE_18710 cysG; siroheme synthase CysG K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RGE_23430 cobA; uroporphyrin-III C-methyltransferase CobA K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RGE_38910 putative cob(II)yrinic acid a,c-diamide reductase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RGE_06570 nirE; uroporphyrinogen-III C-methyltransferase NirE K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RGE_06630 nirG; heme d1 biosynthesis protein NirG K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D RGE_06620 nirDL; nitrite reductase heme biosynthesis D/L protein,putative K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D RGE_06640 nirH; heme d1 biosynthesis protein NirH K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D RGE_06660 nirN; heme d1 biosynthesis protein NirN K24867 nirN; dihydro-heme d1 dehydrogenase
D RGE_41780 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D RGE_41790 ctaA; cytochrome oxidase assembly CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGE_29170 cbiX; cobalamin (Vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RGE_18740 cobI; precorrin-2 C20-methyltransferase CobI K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RGE_18750 cobJ; precorrin-3B C(17)-methyltransferase CobJ K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RGE_18790 cobM; precorrin-4 C11-methyltransferase CobM K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RGE_18780 cbiG; putative cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RGE_19270 cobF; precorrin-6A synthase CobF K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D RGE_18760 cobK; precorrin-6A reductase CobK K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RGE_18770 cobL; putative precorrin-6y C5,15-methyltransferase CobL K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RGE_18730 cobH; precorrin-8X methylmutase CobH K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RGE_18800 cobB; cobyrinic acid A,C-diamide synthase CobB K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RGE_06060 cobN; cobalamin biosynthetic protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RGE_44520 cobN; cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RGE_44540 cobO; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGE_15080 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RGE_44400 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RGE_44410 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RGE_13520 cbiB; cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RGE_28900 cobD; putative cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RGE_15040 cobU; bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RGE_44430 cobU; bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RGE_15100 cobS; cobalamin-5'-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RGE_08050 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RGE_15090 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RGE_15110 cobC; putative alpha-ribazole phosphatase CobC K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RGE_33480 bchH; magnesium-chelatase subunit H BchH K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RGE_16590 bchD; protoporphyrin IX magnesium-chelatase BchD K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RGE_16580 bchI; protoporphyrin IX magnesium-chelatase BchI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RGE_44510 putative magnesium-chelatase subunit K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RGE_33500 bchM; Mg-protoporphyrin IX methyl transferase BchM K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D RGE_45840 bchE; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase BchE K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D RGE_33550 acsF; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase AcsF K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D RGE_45850 bchJ; 4-vinyl protochlorophyllidereductase BchJ K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D RGE_33490 bchL; light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D RGE_33460 bchN; light-independent protochlorophyllide reductase subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D RGE_33470 bchB; light-independent protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D RGE_33410 bchG; geranylgeranyl bacteriochlorophyll synthase BchG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D RGE_33700 bchX; bacteriochlorophyllide reductase subunit X BchX K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D RGE_33690 bchY; bacteriochlorophyllide reductase subunit Y BchY K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D RGE_33680 bchZ; bacteriochlorophyllide reductase subunit BchZ K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D RGE_33450 bchF; 2-vinyl bacteriochlorophillide hydratase BchF K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D RGE_33710 bchC; 2-alpha-hydroxy ethyl bacteriochlorophyllide oxidase BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D RGE_33390 bchP; geranylgeranyl bacteriochlorophyll reductase BchP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RGE_06100 bfr; bacterioferritin Bfr K03594 bfr; bacterioferritin [EC:1.16.3.1]
D RGE_07490 bfr; bacterioferritin Bfr K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rge00130]
D RGE_38580 endoribonuclease L-PSP K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D RGE_00960 ubiA; 4-hydroxybenzoate octaprenyltransferase UbiA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RGE_38940 ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase UbiD K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RGE_42480 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RGE_13940 ubiG; 3-demethylubiquinone-9 3-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RGE_44810 ubiH; ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RGE_10670 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RGE_33790 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RGE_08080 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Coq7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RGE_06730 menF; isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D RGE_06720 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase MenD K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D RGE_06710 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D RGE_37230 menE; O-succinylbenzoate-CoA ligase MenE K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D RGE_37240 menB; naphthoate synthase MenB K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RGE_33800 menA; 1,4-Dihydroxy-2-naphtoate prenyltransferase MenA K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RGE_23910 NAD(P)H dehydrogenase, quinone family K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RGE_20750 NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RGE_06290 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rge00900]
D RGE_16690 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGE_27330 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RGE_26910 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RGE_08720 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RGE_26900 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RGE_27560 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RGE_35320 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_42480 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RGE_16680 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RGE_33730 crtE; geranylgeranyl pyrophosphate synthetase CrtE K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RGE_42560 trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RGE_27350 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGE_33390 bchP; geranylgeranyl bacteriochlorophyll reductase BchP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RGE_13540 putative M48A family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rge00906]
D RGE_27990 squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGE_33570 crtB; prephytoene pyrophosphate synthase CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGE_33420 crtI; phytoene dehydrogenase CrtI K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RGE_33580 crtC; hydroxyneurosporene dehydrogenase CrtC K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D RGE_33590 crtD; hydroxyneurosporene and rhodopin dehydrogenase CrtD K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D RGE_33720 crtF; hydroxyneurosporene methyltransferase CrtF K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:rge00907]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_32860 short-chain dehydrogenase/reductase SDR K13774 atuB; citronellol/citronellal dehydrogenase
D RGE_09200 short-chain dehydrogenase/reductase SDR K13775 atuG; citronellol/citronellal dehydrogenase
D RGE_32880 acyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D RGE_32900 carbamoyl-phosphate synthase L chain, ATP-binding K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D RGE_32870 carboxyl transferase K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D RGE_32890 enoyl-CoA hydratase/isomerase K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D RGE_43400 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RGE_09170 fadA; thiolase family protein FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RGE_36000 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGE_44770 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rge00523]
D RGE_41420 rmlA; glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGE_41440 rlmB; dTDP-glucose 4,6-dehydratase RlmB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGE_41410 rmlC; dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGE_41430 rmlD; dTDP-4-dehydrorhamnose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RGE_06730 menF; isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:rge01055]
D RGE_43910 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RGE_41440 rlmB; dTDP-glucose 4,6-dehydratase RlmB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rge00946]
D RGE_01480 hypothetical protein K22906 phy; phloretin hydrolase [EC:3.7.1.4]
D RGE_12780 hydrolase K22906 phy; phloretin hydrolase [EC:3.7.1.4]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:rge00311]
D RGE_38680 putative epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D RGE_31330 peptidase S45 family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RGE_19960 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:rge00332]
D RGE_42520 proB; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RGE_44680 proA; glutamate-5-semialdehyde dehydrogenase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rge00261]
D RGE_43910 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RGE_31270 cysNC; sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RGE_31260 cysD; sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGE_31600 lysC; aspartokinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGE_12500 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGE_05250 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGE_34810 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGE_45130 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rge00521]
D RGE_02550 putative glucokinase/RipR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_02560 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_22370 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGE_15170 suhB; myo-inositol-1(or 4)-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RGE_41420 rmlA; glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGE_41440 rlmB; dTDP-glucose 4,6-dehydratase RlmB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGE_41410 rmlC; dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGE_41430 rmlD; dTDP-4-dehydrorhamnose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RGE_02550 putative glucokinase/RipR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RGE_02560 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rge00525]
D RGE_41420 rmlA; glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGE_41440 rlmB; dTDP-glucose 4,6-dehydratase RlmB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rge00401]
D RGE_13890 tyrA; prephenate dehydrogenase TyrA K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_08600 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_25530 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_28890 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_01740 tyrB; aromatic amino acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_15380 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RGE_03080 trpE; anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGE_03090 trpG; anthranilate synthase component II TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RGE_41120 fabD; malonyl CoA-acyl carrier protein transacylase, FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGE_21750 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_29640 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_41110 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase, FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_42180 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_41310 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_09700 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_29800 short-chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_28280 fabI; enoyl-[acyl-carrier-protein] reductase, FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RGE_17270 acyl carrier protein K02078 acpP; acyl carrier protein
D RGE_41100 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rge00999]
D RGE_05090 metK; S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGE_42210 aroE; shikimate dehydrogenase AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rge00362]
D RGE_09170 fadA; thiolase family protein FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGE_06360 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RGE_32800 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RGE_09160 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGE_24380 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGE_11560 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGE_11570 sodium ion-translocating decarboxylase, biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGE_23920 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGE_01500 paaH; 3-hydroxyacyl-CoA dehydrogenase PaaH K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rge00627]
D RGE_07010 putative amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGE_46080 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGE_42480 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RGE_01530 amidohydrolase family protein K15063 ligW; 5-carboxyvanillate decarboxylase
D RGE_11670 vanB; vanillate O-demethylase oxidoreductase VanB K03863 vanB; vanillate monooxygenase ferredoxin subunit
D RGE_09920 atoD; 3-oxoacid CoA-transferase, A subunit AtoD K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01400 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01260 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01270 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01410 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_09930 atoA; 3-oxoacid CoA-transferase, B subunit AtoA K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:rge00364]
D RGE_10130 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGE_33820 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rge00625]
D RGE_38410 adhB; iron-containing alcohol dehydrogenase AdhB K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D RGE_11350 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGE_25450 nifK; putative nitrogenase molybdenum-iron protein beta chain NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RGE_42900 nifK; nitrogenase molybdenum-iron protein beta chain NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RGE_25430 nifH; nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
D RGE_42880 nifH; nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
D RGE_42890 nifD; nitrogenase molybdenum-iron protein alpha chain NifD K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RGE_45940 2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rge00361]
D RGE_10130 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGE_33820 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGE_45940 2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:rge00623]
D RGE_10130 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGE_33820 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:rge00633]
D RGE_01030 oxidoreductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D RGE_35760 hupB; uptake hydrogenase large subunit HupB K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RGE_35750 hupA; uptake hydrogenase small subunit HupA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RGE_35960 hupV; quinone-reactive Ni/Fe-hydrogenase HupV K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D RGE_35950 hupU; NADH ubiquinone oxidoreductase, 20 kDa subunit HupU K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D RGE_28660 porA; pyruvate ferredoxin oxidoreductase alpha subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RGE_28670 porB; pyruvate ferredoxin oxidoreductase beta subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RGE_28650 porC; pyruvate ferredoxin oxidoreductase gamma subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
D RGE_09170 fadA; thiolase family protein FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rge00643]
D RGE_23720 maiA; putative maleylacetoacetate isomerase MaiA K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D RGE_26760 putative fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RGE_02050 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D RGE_07010 putative amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGE_46080 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D RGE_40090 ureC; urease subunit alpha UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGE_40080 ureB; urease subunit beta UreB K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGE_40070 ureA; urease subunit gamma UreA K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
D RGE_41620 paaG; enoyl-CoA hydratase/isomerase PaaG K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rge00626]
D RGE_38410 adhB; iron-containing alcohol dehydrogenase AdhB K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D RGE_11350 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rge03020]
D RGE_03200 rpoB; DNA-directed RNA polymerase subunit beta RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGE_03210 rpoC; DNA-directed RNA polymerase subunit beta' RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGE_03560 rpoA; DNA-directed RNA polymerase subunit alpha RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGE_35670 rpoZ; DNA-directed RNA polymerase subunit omega RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D RGE_37110 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rge03010]
D RGE_13870 rpsA; 30S ribosomal protein S1 RpsA K02945 RP-S1; small subunit ribosomal protein S1
D RGE_27390 rpsB; 30S ribosomal protein S2 RpsB K02967 RP-S2; small subunit ribosomal protein S2
D RGE_03350 rpsC; 30S ribosomal protein S3 RpsC K02982 RP-S3; small subunit ribosomal protein S3
D RGE_03550 rpsD; 30S ribosomal protein S4 RpsD K02986 RP-S4; small subunit ribosomal protein S4
D RGE_03470 rpsE; 30S ribosomal protein S5 RpsE K02988 RP-S5; small subunit ribosomal protein S5
D RGE_27200 rpsF; 30S ribosomal protein S6 RpsF K02990 RP-S6; small subunit ribosomal protein S6
D RGE_03250 rpsG; 30S ribosomal protein S7 RpsG K02992 RP-S7; small subunit ribosomal protein S7
D RGE_03440 rpsH; 30S ribosomal protein S8 RpsH K02994 RP-S8; small subunit ribosomal protein S8
D RGE_07590 rpsI; 30S ribosomal protein S9 RpsI K02996 RP-S9; small subunit ribosomal protein S9
D RGE_03280 rpsJ; 30S ribosomal protein S10 RpsJ K02946 RP-S10; small subunit ribosomal protein S10
D RGE_03540 rpsK; 30S ribosomal protein S11 RpsK K02948 RP-S11; small subunit ribosomal protein S11
D RGE_03240 rpsL; 30S ribosomal protein S12 RpsL K02950 RP-S12; small subunit ribosomal protein S12
D RGE_03530 rpsM; 30S ribosomal protein S13 RpsM K02952 RP-S13; small subunit ribosomal protein S13
D RGE_03430 rpsN; 30S ribosomal protein S14 RpsN K02954 RP-S14; small subunit ribosomal protein S14
D RGE_15520 rpsO; 30S ribosomal protein S15 RpsO K02956 RP-S15; small subunit ribosomal protein S15
D RGE_13470 rpsP; 30S ribosomal protein S16 RpsP K02959 RP-S16; small subunit ribosomal protein S16
D RGE_03380 rpsQ; 30S ribosomal protein S17 RpsQ K02961 RP-S17; small subunit ribosomal protein S17
D RGE_27180 rpsR; 30S ribosomal protein S18 RpsR K02963 RP-S18; small subunit ribosomal protein S18
D RGE_03330 rpsS; 30S ribosomal protein S19 RpsS K02965 RP-S19; small subunit ribosomal protein S19
D RGE_13350 rpsT; 30S ribosomal protein S20 RpsT K02968 RP-S20; small subunit ribosomal protein S20
D RGE_15280 rpsU; 30S ribosomal protein S21 RpsU K02970 RP-S21; small subunit ribosomal protein S21
D RGE_03170 rplA; 50S ribosomal protein L1 RplA K02863 RP-L1; large subunit ribosomal protein L1
D RGE_03320 rplB; 50S ribosomal protein L2 RplB K02886 RP-L2; large subunit ribosomal protein L2
D RGE_03290 rplC; 50S ribosomal protein L3 RplC K02906 RP-L3; large subunit ribosomal protein L3
D RGE_03300 rplD; 50S ribosomal protein L4 RplD K02926 RP-L4; large subunit ribosomal protein L4
D RGE_03420 rplE; 50S ribosomal protein L5 RplE K02931 RP-L5; large subunit ribosomal protein L5
D RGE_03450 rplF; 50S ribosomal protein L6 RplF K02933 RP-L6; large subunit ribosomal protein L6
D RGE_03190 rplL; 50S ribosomal protein L7/L12 RplL K02935 RP-L7; large subunit ribosomal protein L7/L12
D RGE_27170 rplI; 50S ribosomal protein L9 RplI K02939 RP-L9; large subunit ribosomal protein L9
D RGE_03180 rplJ; 50S ribosomal protein L10 RplJ K02864 RP-L10; large subunit ribosomal protein L10
D RGE_03160 rplK; 50S ribosomal protein L11 RplK K02867 RP-L11; large subunit ribosomal protein L11
D RGE_07580 rplM; 50S ribosomal protein L13 RplM K02871 RP-L13; large subunit ribosomal protein L13
D RGE_03400 rplN; 50S ribosomal protein L14 RplN K02874 RP-L14; large subunit ribosomal protein L14
D RGE_03490 rplO; 50S ribosomal protein L15 RplO K02876 RP-L15; large subunit ribosomal protein L15
D RGE_03360 rplP; 50S ribosomal protein L16 RplP K02878 RP-L16; large subunit ribosomal protein L16
D RGE_03570 rplQ; 50S ribosomal protein L17 RplQ K02879 RP-L17; large subunit ribosomal protein L17
D RGE_03460 rplR; 50S ribosomal protein L18 RplR K02881 RP-L18; large subunit ribosomal protein L18
D RGE_13500 rplS; 50S ribosomal protein L19 RplS K02884 RP-L19; large subunit ribosomal protein L19
D RGE_24550 rplT; 50S ribosomal protein L20 RplT K02887 RP-L20; large subunit ribosomal protein L20
D RGE_42550 rplU; 50S ribosomal protein L21 RplU K02888 RP-L21; large subunit ribosomal protein L21
D RGE_03340 rplV; 50S ribosomal protein L22 RplV K02890 RP-L22; large subunit ribosomal protein L22
D RGE_03310 rplW; 50S ribosomal protein L23 RplW K02892 RP-L23; large subunit ribosomal protein L23
D RGE_03410 rplX; 50S ribosomal protein L24 RplX K02895 RP-L24; large subunit ribosomal protein L24
D RGE_08700 rplY; 50S ribosomal protein L25 RplY K02897 RP-L25; large subunit ribosomal protein L25
D RGE_42540 rpmA; 50S ribosomal protein L27 RpmA K02899 RP-L27; large subunit ribosomal protein L27
D RGE_34160 rpmB; 50S ribosomal protein L28 RpmB K02902 RP-L28; large subunit ribosomal protein L28
D RGE_03370 rpmC; 50S ribosomal protein L29 RpmC K02904 RP-L29; large subunit ribosomal protein L29
D RGE_03480 rpmD; 50S ribosomal protein L30 RpmD K02907 RP-L30; large subunit ribosomal protein L30
D RGE_33110 rpmE; 50S ribosomal protein L31 type B RpmE K02909 RP-L31; large subunit ribosomal protein L31
D RGE_41150 rpmF; 50S ribosomal protein L32 RpmF K02911 RP-L32; large subunit ribosomal protein L32
D RGE_34170 rpmG; 50S ribosomal protein L33 RpmG K02913 RP-L33; large subunit ribosomal protein L33
D RGE_47060 rpmH; 50S ribosomal protein L34 RpmH K02914 RP-L34; large subunit ribosomal protein L34
D RGE_24540 rpmI; 50S ribosomal protein L35 RpmI K02916 RP-L35; large subunit ribosomal protein L35
D RGE_03520 rpmJ; 50S ribosomal protein L36 RpmJ K02919 RP-L36; large subunit ribosomal protein L36
D RGE_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGE_r0080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGE_r0050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGE_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGE_r0070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGE_r0040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rge00970]
D RGE_t0130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0470 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0410 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0350 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0310 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGE_t0430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGE_t0440 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGE_t0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGE_t0220 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGE_t0380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGE_t0270 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RGE_t0070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGE_t0140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGE_t0150 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGE_t0280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGE_t0360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGE_t0030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGE_t0490 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGE_t0180 tRNA-His K14226 tRNA-His; tRNA His
D RGE_t0400 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGE_t0480 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGE_t0420 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGE_t0290 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0110 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGE_t0100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGE_t0450 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGE_t0060 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGE_t0080 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGE_t0500 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RGE_t0230 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGE_t0460 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGE_t0330 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGE_t0190 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGE_t0320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGE_t0300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGE_t0370 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGE_t0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGE_t0090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGE_t0200 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGE_t0050 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RGE_t0020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RGE_t0240 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGE_t0170 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGE_t0210 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGE_t0120 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D RGE_12620 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGE_27400 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGE_01840 putative amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGE_46690 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGE_46700 gatB; putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RGE_46680 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RGE_38590 glnS; glutaminyl-tRNA synthetase GlnS K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGE_34910 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGE_10940 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGE_43670 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGE_43660 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGE_24520 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGE_35310 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGE_11380 selA; L-seryl-tRNA(Ser) selenium transferase SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RGE_31640 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGE_36710 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGE_04570 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RGE_33960 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGE_45160 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGE_14020 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGE_41580 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGE_46000 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGE_42500 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGE_27550 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGE_24560 pheS; phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGE_24570 pheT; phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGE_07630 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGE_34210 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rge03060]
D RGE_03500 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D RGE_03140 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D RGE_15560 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RGE_04500 secD; preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D RGE_04510 secF; preprotein translocase SecF subunit K03074 secF; preprotein translocase subunit SecF
D RGE_04490 yajC; preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RGE_47030 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGE_10540 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGE_41920 secB; preprotein translocase SecB subunit K03071 secB; preprotein translocase subunit SecB
D RGE_42380 ffh; signal recognition particle subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGE_srp0010 bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D RGE_42390 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RGE_10400 tatA; sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGE_10410 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGE_10420 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RGE_41010 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGE_14000 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rge04122]
D RGE_15420 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_42750 nifS; nitrogenase metalloclusters biosynthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_43040 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_16640 putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGE_33990 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RGE_46850 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RGE_32550 moaE; molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RGE_32680 moaA; molybdenum cofactor biosynthesis protein A MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RGE_32560 moaD; molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein
D RGE_34310 hypothetical protein K03636 moaD; sulfur-carrier protein
D RGE_37650 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RGE_46440 moaC; molybdopterin cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RGE_15200 mogA; molybdopterin biosynthesis protein Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rge03018]
D RGE_42510 rppH; RNA pyrophosphohydrolase RppH K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RGE_40920 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGE_14990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGE_15530 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RGE_24250 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGE_38370 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGE_41210 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGE_27430 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGE_22330 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGE_46360 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGE_33100 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RGE_27120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGE_43190 groEL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGE_27510 hfq; protein Hfq K03666 hfq; host factor-I protein
D RGE_33850 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGE_33860 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGE_05000 putative polyphosphate kinase 2 family protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGE_02210 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGE_13400 pcnB; poly(A) polymerase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rge03030]
D RGE_43320 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_18670 dnaQ; DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_13680 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGE_33000 dnaX; DNA polymerase III gamma/tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGE_26080 holB; DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGE_45180 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGE_29130 holC; putative DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGE_00020 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGE_27160 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RGE_27040 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D RGE_46350 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D RGE_32730 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RGE_27250 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RGE_33870 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGE_24120 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGE_23030 putative nucleoside-triphosphatase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
C 03410 Base excision repair [PATH:rge03410]
D RGE_15350 nth; endonuclease III Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGE_03120 ung; uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RGE_08770 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RGE_08750 mutM; formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RGE_31630 alkA; DNA-3-methyladenine glycosylase II AlkA K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGE_35110 ada_alkA; DNA-O6-methylguanine-protein-cysteine S-methyltransferase/DNA-3-methyladenine glycosylase Ada/AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGE_00940 putative uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGE_04780 putative uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGE_14460 xthA; exodeoxyribonuclease III XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGE_46730 exoA; exodeoxyribonuclease ExoA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGE_33870 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGE_21590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGE_24120 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rge03420]
D RGE_26920 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RGE_43250 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D RGE_46390 uvrA; UvrABC system protein A UvrA K03701 uvrA; excinuclease ABC subunit A
D RGE_15390 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D RGE_16220 uvrC; UvrABC system protein C UvrC K03703 uvrC; excinuclease ABC subunit C
D RGE_18140 putative ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGE_33910 uvrD; DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGE_33870 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGE_24120 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGE_37110 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:rge03430]
D RGE_15160 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RGE_14740 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RGE_18140 putative ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGE_33910 uvrD; DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGE_12150 sbcB; exodeoxyribonuclease I SbcB K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RGE_31970 xseA_sodB; exodeoxyribonuclease 7 large subunit/superoxide dismutase K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RGE_16670 xseB; exodeoxyribonuclease 7 small subunit XseB K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RGE_21590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGE_46350 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D RGE_13680 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGE_00020 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGE_33000 dnaX; DNA polymerase III gamma/tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGE_45180 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGE_26080 holB; DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGE_43320 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_18670 dnaQ; DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_29130 holC; putative DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGE_24120 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rge03440]
D RGE_21590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGE_46350 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D RGE_40970 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RGE_32980 recR; recombination protein RecR K06187 recR; recombination protein RecR
D RGE_46600 recA; protein RecA K03553 recA; recombination protein RecA
D RGE_33870 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGE_44220 rubA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RGE_44240 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RGE_10140 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RGE_00980 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGE_37530 recB; exodeoxyribonuclease V beta chain RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RGE_37520 recC; exodeoxyribonuclease V gamma chain RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RGE_37540 recD; exodeoxyribonuclease V alpha chain RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RGE_13680 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGE_00020 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGE_33000 dnaX; DNA polymerase III gamma/tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGE_45180 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGE_26080 holB; DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGE_43320 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_18670 dnaQ; DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_29130 holC; putative DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGE_02130 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RGE_27190 priB; primosomal replication protein N PriB K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:rge03450]
D RGE_37590 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D RGE_26430 ligD; ATP-dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rge03250]
D RGE_31660 ppiA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rge02010]
D RGE_46230 cysP; sulfate ABC transporter, periplasmic sulfate-binding protein CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RGE_46220 cysT; sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RGE_46210 cysW; sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RGE_46200 cysA; sulfate ABC transporter, ATPase subunit CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RGE_25320 tauA; taurine ABC transporter substrate binding protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RGE_25340 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D RGE_25330 tauB; taurine ABC transporter ATP binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RGE_25360 ssuA; putative aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_25390 ssuA; putative aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_01190 putative ABC transporter substrate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_25410 ssuC; aliphatic sulfonate ABC transporter, permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D RGE_01170 putative ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein
D RGE_25420 ssuB; aliphatic sulfonate import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGE_01180 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGE_06250 modA; molybdenum ABC transporter, periplasmic molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D RGE_06240 modB; molybdenum ABC transporter, permease protein ModB K02018 modB; molybdate transport system permease protein
D RGE_06230 modC; molybdenum ABC transporter,ATPase subunit ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RGE_27010 fbpA; putative iron-uptake ABC transporter, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RGE_31490 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RGE_31470 ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D RGE_37600 fbpB; putative ABC transporter permease FbpB K02011 afuB; iron(III) transport system permease protein
D RGE_31480 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RGE_37610 fbpC; putative ABC transporter ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RGE_00320 putative ABC transporter substrate binding protein K11073 potF; putrescine transport system substrate-binding protein
D RGE_26270 potF; putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein
D RGE_26300 potI; putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein
D RGE_26290 potH; putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein
D RGE_26280 potG; putrescine ABC transporter ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RGE_02630 malE; maltose ABC transporter, maltose-binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RGE_02620 malF; maltose ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D RGE_02610 malG; maltose ABC transporter, permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D RGE_37900 sugar ABC transporter ATP binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGE_02640 malK; maltose ABC transporter, ATPase subunit MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGE_15890 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGE_22770 putative ABC transporter substrate binding protein K10227 smoE; polyol transport system substrate-binding protein
D RGE_37870 sugar ABC transporter substrate binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RGE_37880 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D RGE_37890 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D RGE_08340 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RGE_08320 putative signal peptide protein, toluene tolerance Ttg2C-like K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RGE_28500 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RGE_08310 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RGE_28480 putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RGE_08350 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RGE_08300 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RGE_28490 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RGE_45490 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RGE_45530 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RGE_45830 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RGE_40020 putative lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RGE_45550 putative ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RGE_40000 putative ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RGE_45790 putative ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RGE_45780 putative ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RGE_40010 putative ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RGE_45560 putative ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RGE_45800 putative ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGE_39990 putative ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGE_45540 putative ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGE_15920 putative ABC transporter substrate binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RGE_15910 putative ABC transporter permease protein K17316 gtsB; glucose/mannose transport system permease protein
D RGE_15900 putative ABC transporter permease protein K17317 gtsC; glucose/mannose transport system permease protein
D RGE_42930 sugar-binding protein, putative K10439 rbsB; ribose transport system substrate-binding protein
D RGE_17720 rbsB; ribose ABC transporter substrate binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D RGE_17700 rbsC; ribose ABC transporter permease protein RbsC K10440 rbsC; ribose transport system permease protein
D RGE_17710 rbsA; ribose ABC transporter ATP binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RGE_17670 rbsD; high affinity ribose transport protein RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D RGE_10630 ugpB; sn-glycerol-3-phosphate ABC transporter substrate binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RGE_10620 ugpA; sn-glycerol-3-phosphate ABC transporter permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RGE_10610 ugpE; sn-glycerol-3-phosphate ABC transporter permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RGE_10600 ugpC; sn-glycerol-3-phosphate ABC transporter ATP binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RGE_33190 pstS; phosphate ABC transporter substrate binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RGE_33180 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D RGE_33170 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RGE_33160 pstB; phosphate ABC transporter ATP binding protein, PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RGE_03930 ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RGE_03950 ABC transporter permease protein K02042 phnE; phosphonate transport system permease protein
D RGE_03960 ABC transporter permease protein K02042 phnE; phosphonate transport system permease protein
D RGE_03940 ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGE_09310 gltI; glutamate/aspartate transport system substrate-binding protein GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGE_00370 bacterial extracellular solute-binding protein, family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGE_09330 gltK; glutamate/aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D RGE_09320 gltJ; glutamate/aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D RGE_09340 gltL; glutamate/aspartate ABC type transport system ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RGE_03000 putative substrate-binding periplasmic (pbp) ABC transporter protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_07710 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_15500 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_28940 putative high-affinity branched-chain amino acid ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_29120 livK; putative high-affinity branched-chain amino acid ABC transporter substrate binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_02990 putative ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGE_07730 putative ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGE_24320 putative ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGE_34090 livH; putative high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGE_07720 putative branched-chain amino acid transport system permease K01998 livM; branched-chain amino acid transport system permease protein
D RGE_24330 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGE_02980 putative ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D RGE_34080 livM; putative high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGE_03020 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_07740 livG; ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_24340 livG; ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_34070 livG; putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_07700 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_24350 livF; ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_03010 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_34060 livF; putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_20910 putative outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D RGE_29260 putative ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RGE_30860 metQ; D-methionine ABC transporter substrate binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D RGE_20900 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D RGE_30880 metI; D-methionine ABC transporter permease MetI K02072 metI; D-methionine transport system permease protein
D RGE_20890 putative ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RGE_30870 metN; D-methionine ABC transporter ATP binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D RGE_39470 urtA; ABC transporter substrate-binding protein UrtA K11959 urtA; urea transport system substrate-binding protein
D RGE_39480 urtB; putative ABC transporter permease UrtB K11960 urtB; urea transport system permease protein
D RGE_39490 urtC; ABC transporter permease UrtC K11961 urtC; urea transport system permease protein
D RGE_39500 urtD; ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RGE_39510 urtE; ABC transporter ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RGE_11000 dppA; dipeptide ABC transporter substrate binding protein DppA K12368 dppA; dipeptide transport system substrate-binding protein
D RGE_11010 dppB; dipeptide ABC transporter permease protein DppB K12369 dppB; dipeptide transport system permease protein
D RGE_11020 dppC; dipeptide ABC transporter permease protein DppC K12370 dppC; dipeptide transport system permease protein
D RGE_11030 dppD; dipeptide ABC transporter ATP binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D RGE_11040 dppF; dipeptide ABC transporter ATP binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D RGE_04350 rfbA; O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein
D RGE_04340 rfbB; O-antigen export system ATP-binding protein RfbB K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RGE_00510 natB; sodium ABC transporter permease protein NatB K09696 natB; sodium transport system permease protein
D RGE_00500 natA; sodium ABC transporter ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RGE_21570 lolC; lipoprotein ABC transporter permease LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D RGE_21560 lolD; lipoprotein ABC transporter ATP binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RGE_22090 ccmD; cytochrome c-type biogenesis protein CcmD K02196 ccmD; heme exporter protein D
D RGE_22080 ccmC; cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D RGE_22070 ccmB; cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D RGE_22040 ccmA; cytochrome c-type biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RGE_29150 putative ABC transporter permease K07091 lptF; lipopolysaccharide export system permease protein
D RGE_29160 putative ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D RGE_46040 putative ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RGE_19170 nosY; copper ABC transporter, permease protein, NosY K19341 nosY; Cu-processing system permease protein
D RGE_19180 nosF; copper ABC transporter, ATP-binding protein NosF K19340 nosF; Cu-processing system ATP-binding protein
D RGE_05940 ybtP; iron ABC transporter permease/ATP-binding protein YbtP K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RGE_05950 ybtQ; iron ABC transporter permease/ATP-binding protein YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RGE_13830 msbA; lipid A ABC transporter permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RGE_09290 ABC transporter permease/ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RGE_38880 ABC transporter permease/ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGE_27850 macB; macrolide ABC transporter permease/ATP-binding protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:rge02060]
D RGE_44010 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RGE_44020 ptsH; sugar transport PTS system phosphocarrier protein HPr, PtsH K02784 ptsH; phosphocarrier protein HPr
D RGE_44030 phosphotransferase system, fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGE_16110 fruB; phosphoenolpyruvate--protein phosphotransferase FruB K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D RGE_16130 fruA; PTS system, fructose-specific IIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RGE_16120 fruK; 1-phosphofructokinase FruK K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RGE_45090 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rge03070]
D RGE_35070 tolC; type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RGE_07950 gspD; putative general secretion pathway protein D GspD K02453 gspD; general secretion pathway protein D
D RGE_08040 gspC; putative general secretion pathway protein C GspC K02452 gspC; general secretion pathway protein C
D RGE_07930 gspF; putative general secretion pathway protein F GspF K02455 gspF; general secretion pathway protein F
D RGE_08030 gspG; putative general secretion pathway protein G GspG K02456 gspG; general secretion pathway protein G
D RGE_08020 gspH; putative general secretion pathway protein H GspH K02457 gspH; general secretion pathway protein H
D RGE_08010 gspI; putative general secretion pathway protein I GspI K02458 gspI; general secretion pathway protein I
D RGE_08000 gspJ; putative general secretion pathway protein J GspJ K02459 gspJ; general secretion pathway protein J
D RGE_07990 gspK; putative general secretion pathway protein K GspK K02460 gspK; general secretion pathway protein K
D RGE_07980 gspL; putative general secretion pathway protein L GspL K02461 gspL; general secretion pathway protein L
D RGE_07970 gspM; putative general secretion pathway protein M GspM K02462 gspM; general secretion pathway protein M
D RGE_07940 gspE; putative general secretion pathway protein E GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGE_21690 putative secretion pathway ATPase K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGE_04500 secD; preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D RGE_04510 secF; preprotein translocase SecF subunit K03074 secF; preprotein translocase subunit SecF
D RGE_03140 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D RGE_15560 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RGE_03500 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D RGE_04490 yajC; preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RGE_47030 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGE_10540 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGE_42390 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RGE_41920 secB; preprotein translocase SecB subunit K03071 secB; preprotein translocase subunit SecB
D RGE_42380 ffh; signal recognition particle subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGE_10400 tatA; sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGE_10410 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGE_10420 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RGE_30290 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_25810 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_25680 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_25940 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_30400 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_32150 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_30360 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D RGE_25740 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D RGE_30320 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D RGE_25780 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D RGE_25890 icmF; type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D RGE_32190 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D RGE_30300 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D RGE_25800 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D RGE_25700 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rge02020]
D RGE_33130 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGE_33140 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RGE_45010 response regulator receiver protein CheY-like K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RGE_05880 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_39570 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_33190 pstS; phosphate ABC transporter substrate binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RGE_18310 sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGE_26890 ompB; osmolarity sensor protein OmpB K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGE_18300 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RGE_26880 ompR; DNA-binding response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RGE_41040 mucD; serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107]
D RGE_07360 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D RGE_05420 creC; sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D RGE_05430 creB; DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D RGE_09040 baeS; putative signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D RGE_09050 baeR; DNA-binding transcriptional regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D RGE_30140 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGE_09270 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGE_09260 qseB; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D RGE_30130 qseB; two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D RGE_17030 flhD; flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RGE_17040 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGE_16920 fliC; flagellin FliC K02406 fliC; flagellin
D RGE_16930 fliC; flagellin FliC K02406 fliC; flagellin
D RGE_16940 fliC; flagellin FriC K02406 fliC; flagellin
D RGE_19460 lafA; lateral flagellin LafA K02406 fliC; flagellin
D RGE_19720 lafS; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D RGE_17140 filA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D RGE_45970 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RGE_19730 lafT; chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RGE_17060 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D RGE_20680 kdpD; two-component system, sensor kinase protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGE_20670 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGE_20720 kdpA; potassium-transporting ATPase A chain KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RGE_20710 kdpB; potassium-transporting ATPase B chain KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RGE_20700 kdpC; potassium-transporting ATPase C chain KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RGE_21710 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D RGE_21700 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D RGE_41790 ctaA; cytochrome oxidase assembly CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGE_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGE_23190 citA; sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RGE_23200 citB; transcriptional regulator CitB K07702 dpiA; two-component system, CitB family, response regulator CitB
D RGE_23130 citC; citrate lyase synthetase CitC K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D RGE_23140 citD; citrate lyase acyl carrier protein CitD K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D RGE_12230 putative lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RGE_23150 citE; citrate lyase beta subunit CitE K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RGE_23160 citF; citrate lyase alpha subunit CitF K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D RGE_23170 citX; apo-citrate lyase phosphoribosyl-dephospho-CoA transferase citX K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D RGE_23180 citG; putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D RGE_40270 triphosphoribosyl-dephospho-CoA protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D RGE_36500 algZ; two-component system sensor protein, alginate biosynthesis K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RGE_36490 algR; two component transcriptional regulator, LytTR family K08083 algR; two-component system, LytTR family, response regulator AlgR
D RGE_00500 natA; sodium ABC transporter ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RGE_00510 natB; sodium ABC transporter permease protein NatB K09696 natB; sodium transport system permease protein
D RGE_21280 frdA; fumarate reductase flavoprotein subunit FrdA K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGE_21270 frdB; fumarate reductase iron-sulfur subunit FrdB K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGE_21260 frdC; fumarate reductase subunit C FrdC K00246 frdC; succinate dehydrogenase subunit C
D RGE_21250 frdD; fumarate reductase subunit D FrdD K00247 frdD; succinate dehydrogenase subunit D
D RGE_40500 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_40700 sensor protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_23360 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_40490 gacA; two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGE_23350 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGE_10170 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGE_39320 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGE_20130 putative periplasmic sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D RGE_19330 integral membrane sensor signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RGE_19340 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR
D RGE_23820 glnD; UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RGE_28140 glnB; nitrogen regulatory protein P-II GlnB K04751 glnB; nitrogen regulatory protein P-II 1
D RGE_14390 ntrB; signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGE_14400 ntrC; nitrogen metabolism transcriptional regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RGE_26250 puuA; glutamate--putrescine ligase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_26330 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_44620 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGE_44610 two component transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RGE_43170 nifA; nitrogen fixation specific regulatory protein NifA K02584 nifA; Nif-specific regulatory protein
D RGE_09900 atoS; signal transduction histidine-protein kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D RGE_09890 atoC; acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D RGE_09920 atoD; 3-oxoacid CoA-transferase, A subunit AtoD K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01400 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01260 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01270 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_01410 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_09930 atoA; 3-oxoacid CoA-transferase, B subunit AtoA K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGE_09940 atoE; short chain fatty acid transporter AtoE K02106 atoE; short-chain fatty acids transporter
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_20840 hypothetical protein K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D RGE_22420 dctA; C4-dicarboxylate transport protein DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D RGE_42350 pilS; two-component system sensor kinase PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RGE_42340 pilR; two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D RGE_25170 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RGE_46050 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RGE_46470 pilE; fimbrial protein, type IV pilin, PilE K02650 pilA; type IV pilus assembly protein PilA
D RGE_35950 hupU; NADH ubiquinone oxidoreductase, 20 kDa subunit HupU K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D RGE_35960 hupV; quinone-reactive Ni/Fe-hydrogenase HupV K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D RGE_36080 PAS/PAC sensor hybrid histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RGE_35940 hupR; hydrogenase transcriptional regulator HupR K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D RGE_35750 hupA; uptake hydrogenase small subunit HupA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RGE_35760 hupB; uptake hydrogenase large subunit HupB K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RGE_35780 hupC; putative [Ni] hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D RGE_35420 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGE_37410 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGE_36420 methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGE_46370 methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGE_06770 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07900 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_22810 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_17620 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_09090 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39370 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39410 mcp; methyl-accepting chemotaxis sensory transducer, putative K03406 mcp; methyl-accepting chemotaxis protein
D RGE_22990 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07020 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_10090 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_17150 putative chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_20330 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_32450 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_36600 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_36610 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_37440 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_37480 bacterial chemotaxis sensory transducer domain protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_42580 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_44460 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_44470 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39380 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_03870 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07040 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_11460 mcp; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D RGE_34430 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D RGE_00890 aer; putative aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D RGE_46160 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RGE_37510 mcp; putative methyl-accepting chemotaxis protein with PAS/Pac sensor K03776 aer; aerotaxis receptor
D RGE_07030 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_39400 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_34110 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_37430 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_39360 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_37450 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_07060 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_17080 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_05050 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_39350 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_37470 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_35440 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGE_37400 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGE_42080 pilJ; twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D RGE_42090 pilI; twitching motility signal transduction protein PilI K02659 pilI; twitching motility protein PilI
D RGE_42070 pilL; PilL protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RGE_42110 pilG; twitching motility, CheY-like protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RGE_42100 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D RGE_45240 PAS/PAC sensor hybrid histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RGE_45230 two component transcriptional regulator, LuxR family K11712 dctR; two-component system, LuxR family, response regulator DctR
D RGE_15790 dctM; TRAP-T family transporter large inner membrane subunit DctM K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGE_28830 histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D RGE_28820 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D RGE_09340 gltL; glutamate/aspartate ABC type transport system ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RGE_09330 gltK; glutamate/aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D RGE_09320 gltJ; glutamate/aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D RGE_09310 gltI; glutamate/aspartate transport system substrate-binding protein GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGE_00370 bacterial extracellular solute-binding protein, family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGE_21900 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_37020 crp; catabolite gene activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_34140 crp; transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_29210 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_07760 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_00780 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_28720 pucB; light-harvesting protein B-800/850 beta chain PucB K08939 pucB; light-harvesting protein B-800-850 beta chain
D RGE_33620 pufM; photosynthesis reaction center complex, M subunit PufM K08929 pufM; photosynthetic reaction center M subunit
D RGE_33630 pufL; photosynthesis reaction center complex, L subunit PufL K08928 pufL; photosynthetic reaction center L subunit
D RGE_33640 pufA; alpha subunit of light-harvesting 1 (B870) complex PufA K08926 pufA; light-harvesting complex 1 alpha chain
D RGE_33650 antenna complex, beta subunit family protein K08927 pufB; light-harvesting complex 1 beta chain
D RGE_33660 pufB; beta subunit of light-harvesting 1 (B870) complex PufB K08927 pufB; light-harvesting complex 1 beta chain
D RGE_33520 puhA; H subunit of photosynthetic reaction center PuhA K13991 puhA; photosynthetic reaction center H subunit
D RGE_10480 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGE_21410 petA2; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA2 K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGE_10490 petB; cytochrome b PetB K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGE_10500 petC; cytochrome c1 PetC K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RGE_22050 putative cytochrome c-551 K08738 CYC; cytochrome c
D RGE_06590 nirM; cytochrome c551 NirM K08738 CYC; cytochrome c
D RGE_06670 cyc8H; high-potential cytochrome c8 K08738 CYC; cytochrome c
D RGE_33740 cyc8L; low-potential cytochrome c8 K08738 CYC; cytochrome c
D RGE_31930 ccoN; Cbb3-type cytochrome oxidase subunit 1 CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RGE_31920 ccoO; Cbb3-type cytochrome oxidase subunit 2 CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RGE_31910 ccoQ; Cbb3-type cytochrome oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RGE_31900 ccoP; Cbb3-type cytochrome oxidase subunit 3 CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RGE_20020 qoxA; cytochrome bd-type quinol oxidase subunit 1 QoxA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RGE_20030 qoxB; cytochrome bd-type quinol oxidase subunit 2 QoxB K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RGE_35070 tolC; type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RGE_04080 putative polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D RGE_10700 putative polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D RGE_15400 ptpA; putative protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RGE_04130 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RGE_30500 RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RGE_30530 RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RGE_30470 RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RGE_30560 RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RGE_06940 fecR; putative transmembrane sensor FecR K07165 fecR; transmembrane sensor
D RGE_30490 fecR; putative transmembrane sensor FecR K07165 fecR; transmembrane sensor
D RGE_30520 fecR; putative transmembrane sensor FecR K07165 fecR; transmembrane sensor
D RGE_30550 fecR; putative transmembrane sensor FecR K07165 fecR; transmembrane sensor
D RGE_30660 fecR; putative transmembrane sensor FecR K07165 fecR; transmembrane sensor
D RGE_30460 fecR; putative transmembrane sensor FecR K07165 fecR; transmembrane sensor
D RGE_07350 sensor protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D RGE_22740 PAS/PAC sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_14770 sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_36800 integral membrane sensor signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_17410 Hpt domain protein K20976 hptB; histidine phosphotransfer protein HptB
D RGE_19750 lfgM; putative negative regulator of flagellin synthesis LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGE_17180 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rge04148]
D RGE_20600 rocF; arginase RocF K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RGE_37670 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RGE_10480 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGE_21410 petA2; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA2 K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rge02024]
D RGE_27510 hfq; protein Hfq K03666 hfq; host factor-I protein
D RGE_03080 trpE; anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGE_03090 trpG; anthranilate synthase component II TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RGE_10960 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGE_00680 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGE_30140 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGE_09270 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGE_09260 qseB; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D RGE_30130 qseB; two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D RGE_17030 flhD; flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RGE_17040 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGE_20670 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGE_20660 putative oxidoreductase K20266 trbJ; type IV secretion system protein TrbJ
D RGE_43610 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGE_34960 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGE_43590 putative ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGE_34980 ABC transporter permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGE_43600 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGE_34970 putative ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGE_43620 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGE_34950 potA; ABC transporter ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGE_03000 putative substrate-binding periplasmic (pbp) ABC transporter protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_07710 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_15500 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_28940 putative high-affinity branched-chain amino acid ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_29120 livK; putative high-affinity branched-chain amino acid ABC transporter substrate binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_02990 putative ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGE_07730 putative ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGE_24320 putative ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGE_34090 livH; putative high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGE_07720 putative branched-chain amino acid transport system permease K01998 livM; branched-chain amino acid transport system permease protein
D RGE_24330 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGE_02980 putative ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D RGE_34080 livM; putative high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGE_03020 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_07740 livG; ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_24340 livG; ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_34070 livG; putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_07700 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_24350 livF; ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_03010 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_34060 livF; putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_03030 transcriptional regulator, IclR family K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor
D RGE_46270 putative metalloprotease K20273 zmpA; zinc metalloprotease ZmpA
D RGE_06000 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30260 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_03600 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_07750 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46110 fadD; long-chain-fatty-acid-CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46900 putative long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30240 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_21900 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_37020 crp; catabolite gene activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_34140 crp; transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_29210 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_07760 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_00780 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_39040 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RGE_09010 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_32230 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_16470 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_31200 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_18420 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_29510 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_40100 thiol-activated cytolysin family protein K11031 slo; thiol-activated cytolysin
D RGE_01830 putative ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGE_36860 putative ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGE_46800 putative ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGE_08090 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGE_01770 putative ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGE_32100 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGE_46810 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGE_08100 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGE_01780 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGE_32090 putative ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGE_46820 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGE_08110 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGE_32080 putative ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGE_46830 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGE_01810 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGE_08120 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RGE_47030 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGE_04960 peptidase S8A family protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_03700 putative S8A family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_22320 putative S8A family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_03140 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D RGE_15560 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RGE_03500 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D RGE_04490 yajC; preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RGE_10540 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGE_42390 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RGE_41920 secB; preprotein translocase SecB subunit K03071 secB; preprotein translocase subunit SecB
D RGE_42380 ffh; signal recognition particle subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGE_22010 plc; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rge02030]
D RGE_06770 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07900 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_22810 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_17620 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_09090 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39370 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39410 mcp; methyl-accepting chemotaxis sensory transducer, putative K03406 mcp; methyl-accepting chemotaxis protein
D RGE_22990 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07020 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_10090 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_17150 putative chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_20330 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_32450 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_36600 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_36610 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_37440 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_37480 bacterial chemotaxis sensory transducer domain protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_42580 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_44460 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_44470 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39380 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_03870 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07040 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_11460 mcp; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D RGE_34430 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D RGE_00890 aer; putative aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D RGE_46160 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RGE_37510 mcp; putative methyl-accepting chemotaxis protein with PAS/Pac sensor K03776 aer; aerotaxis receptor
D RGE_02630 malE; maltose ABC transporter, maltose-binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RGE_42930 sugar-binding protein, putative K10439 rbsB; ribose transport system substrate-binding protein
D RGE_17720 rbsB; ribose ABC transporter substrate binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D RGE_11000 dppA; dipeptide ABC transporter substrate binding protein DppA K12368 dppA; dipeptide transport system substrate-binding protein
D RGE_39360 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_37450 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_07030 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_39400 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_34110 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_37430 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_07060 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_17080 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_05050 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_39350 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_37470 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_17090 cheZ; chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D RGE_35440 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGE_37400 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGE_36420 methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGE_46370 methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGE_35430 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RGE_35420 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGE_37410 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGE_19630 lfiG; putative lateral flagellar LfiG-like motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RGE_16820 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RGE_16760 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RGE_19600 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D RGE_19590 putative lateral flagellar FliN-like motor switch protein K02417 fliN; flagellar motor switch protein FliN
D RGE_16750 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RGE_19730 lafT; chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RGE_17060 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D RGE_19740 lafU; chemotaxis protein LafU K02557 motB; chemotaxis protein MotB
D RGE_17070 motB; outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rge02040]
D RGE_19610 lfiE; flagellar hook-basal body complex subunit LfiE K02408 fliE; flagellar hook-basal body complex protein FliE
D RGE_16840 fliE; flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RGE_19620 lfiF; lateral flagellar M-ring protein LfiF K02409 fliF; flagellar M-ring protein FliF
D RGE_16830 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGE_19630 lfiG; putative lateral flagellar LfiG-like motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RGE_16820 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RGE_19640 lfiH; lateral flagellar export/assembly protein LfiH K02411 fliH; flagellar assembly protein FliH
D RGE_16810 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RGE_19650 lfiI; flagellum-specific ATP synthase LfiI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGE_16800 fliI; flagellar biosynthesis ATPase FilI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGE_16790 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RGE_19700 lafE; putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RGE_16780 fliK; putative flagellar hook-length control protein FilK K02414 fliK; flagellar hook-length control protein FliK
D RGE_19710 lafF; flagellar basal body-associated protein LafF K02415 fliL; flagellar protein FliL
D RGE_16770 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D RGE_16760 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RGE_19600 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D RGE_19590 putative lateral flagellar FliN-like motor switch protein K02417 fliN; flagellar motor switch protein FliN
D RGE_16750 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RGE_16740 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RGE_19580 lfiP; lateral flagellar export/assembly protein LfiP K02419 fliP; flagellar biosynthesis protein FliP
D RGE_16730 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGE_19570 lfiQ; lateral flagellar export/assembly protein LfiQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGE_16720 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGE_19560 lfiR; flagellar biosynthetic protein LfiR K02421 fliR; flagellar biosynthesis protein FliR
D RGE_16710 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGE_19540 lfhA; lateral flagellar export/assembly protein LfhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGE_17110 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGE_19550 lfhB; lateral flagellar export/assembly protein LfhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGE_17100 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGE_19780 lfgA; lateral flagellar P-ring addition protein LfgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RGE_17190 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RGE_19790 lfgB; lateral flagellar rod protein LfgB K02387 flgB; flagellar basal-body rod protein FlgB
D RGE_17200 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RGE_19800 lfgC; lateral flagellar basal-body rod protein LfgC K02388 flgC; flagellar basal-body rod protein FlgC
D RGE_17210 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RGE_19810 lfgD; putative basal-body rod modification protein LfgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RGE_17220 flgD; flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RGE_19820 lfgE; flagellar hook protein LfgE K02390 flgE; flagellar hook protein FlgE
D RGE_17230 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RGE_19830 lfgF; lateral flagellar rod protein LfgF K02391 flgF; flagellar basal-body rod protein FlgF
D RGE_17240 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RGE_19840 lfgG; lateral flagellar rod protein LfgG K02392 flgG; flagellar basal-body rod protein FlgG
D RGE_17310 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RGE_19850 lfgH; lateral flagellar L-ring protein LfgH K02393 flgH; flagellar L-ring protein FlgH
D RGE_17320 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RGE_22960 flgH; putative flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RGE_19860 lfgI; lateral flagellar P-ring protein LfgI K02394 flgI; flagellar P-ring protein FlgI
D RGE_17330 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RGE_19770 peptidoglycan hydrolase, flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RGE_19870 lfgJ; putative LfgJ protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RGE_17340 flgJ; peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D RGE_19880 lfgK; lateral flagellar hook associated protein 1 LfgK K02396 flgK; flagellar hook-associated protein 1
D RGE_17350 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RGE_19890 lfgL; lateral flagellar hook-associated protein 3 LfgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RGE_17360 flgL; flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RGE_16920 fliC; flagellin FliC K02406 fliC; flagellin
D RGE_16930 fliC; flagellin FliC K02406 fliC; flagellin
D RGE_16940 fliC; flagellin FriC K02406 fliC; flagellin
D RGE_19460 lafA; lateral flagellin LafA K02406 fliC; flagellin
D RGE_19670 lafB; lateral flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D RGE_16910 fliD; flagellar hook-associated protein 2 FliD K02407 fliD; flagellar hook-associated protein 2
D RGE_19680 lafC; lateral flagellar chaperone protein LafC K02422 fliS; flagellar secretion chaperone FliS
D RGE_16900 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RGE_16890 fliT; putative flagellar protein FliT K02423 fliT; flagellar protein FliT
D RGE_19730 lafT; chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RGE_17060 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D RGE_19740 lafU; chemotaxis protein LafU K02557 motB; chemotaxis protein MotB
D RGE_17070 motB; outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RGE_19750 lfgM; putative negative regulator of flagellin synthesis LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGE_17180 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGE_19760 lfgN; flagellar protein LfgN K02399 flgN; flagellar biosynthesis protein FlgN
D RGE_27060 rpoD; RNA polymerase primary sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RGE_17030 flhD; flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RGE_17040 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGE_25170 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RGE_46050 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RGE_19720 lafS; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D RGE_17140 filA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D RGE_45970 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RGE_14990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rge04980]
D RGE_12390 argK; arginine/ornithine transport system ATPase ArgK K07588 MMAA; GTPase [EC:3.6.5.-]
D RGE_12380 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RGE_02540 metH; cobalamin-dependent methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGE_02080 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rge01501]
D RGE_46760 ampG; putative transporter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RGE_40940 nagZ; beta-N-acetylhexosaminidase NagZ K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RGE_19960 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RGE_09030 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32250 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_16450 mexA; multidrug resistance protein MexA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32720 multidrug efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_21840 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_15870 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_38190 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_16460 mexB; multidrug resistance protein MexB K18138 acrB; multidrug efflux pump
D RGE_32710 transporter, AcrB/D/F family protein K18138 acrB; multidrug efflux pump
D RGE_32240 inner membrane efflux protein K18138 acrB; multidrug efflux pump
D RGE_09010 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_32230 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_16470 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_31200 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_18420 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_29510 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_29550 sensor protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RGE_29540 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RGE_29530 secretion protein HlyD family protein K18145 adeA; membrane fusion protein, multidrug efflux system
D RGE_29520 inner membrane efflux protein K18146 adeB; multidrug efflux pump
D RGE_35070 tolC; type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RGE_08160 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGE_12210 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGE_46640 mrdA; penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGE_09480 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rge01502]
D RGE_09560 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGE_01690 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D RGE_09500 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGE_09510 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGE_09540 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rge01503]
D RGE_23080 putative transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGE_39150 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGE_14790 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGE_41040 mucD; serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107]
D RGE_07360 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D RGE_46020 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RGE_31660 ppiA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RGE_09030 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32250 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_16450 mexA; multidrug resistance protein MexA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32720 multidrug efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_21840 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_15870 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_38190 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_16460 mexB; multidrug resistance protein MexB K18138 acrB; multidrug efflux pump
D RGE_32710 transporter, AcrB/D/F family protein K18138 acrB; multidrug efflux pump
D RGE_32240 inner membrane efflux protein K18138 acrB; multidrug efflux pump
D RGE_35070 tolC; type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RGE_27270 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rge01000]
C 01001 Protein kinases [BR:rge01001]
D RGE_28190 ABC-1 domain protein K08869 ADCK; aarF domain-containing kinase
D RGE_35380 serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RGE_45980 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RGE_33060 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RGE_33070 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RGE_00110 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RGE_05070 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RGE_10720 putative tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGE_04100 protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGE_33130 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGE_18310 sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGE_26890 ompB; osmolarity sensor protein OmpB K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGE_05420 creC; sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D RGE_09040 baeS; putative signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D RGE_30140 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGE_09270 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGE_20680 kdpD; two-component system, sensor kinase protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGE_29550 sensor protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RGE_07370 sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RGE_40500 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_40700 sensor protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_23360 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_20130 putative periplasmic sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D RGE_19330 integral membrane sensor signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RGE_23190 citA; sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RGE_36500 algZ; two-component system sensor protein, alginate biosynthesis K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RGE_17570 lytS; two-component system, LytT family, sensor histidine kinase LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RGE_14390 ntrB; signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGE_44620 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGE_09900 atoS; signal transduction histidine-protein kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D RGE_42350 pilS; two-component system sensor kinase PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RGE_36080 PAS/PAC sensor hybrid histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RGE_39360 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_37450 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_42070 pilL; PilL protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RGE_45240 PAS/PAC sensor hybrid histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RGE_28830 histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D RGE_07350 sensor protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D RGE_22740 PAS/PAC sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_14770 sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_36800 integral membrane sensor signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_14010 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_23260 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_24820 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_05780 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_08830 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_22590 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_22850 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_01590 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_42940 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rge01009]
D RGE_04990 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGE_07530 htpG; heat shock protein 90 HtpG K04079 HSP90A; molecular chaperone HtpG
D RGE_46500 putative protein phosphatase 2C-type K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RGE_35490 putative protein phosphatase 2C-type K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RGE_27670 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RGE_26930 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rge01002]
D RGE_14000 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RGE_42630 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGE_35800 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D RGE_35730 putative C14 family peptidase K22684 MCA1; metacaspase-1 [EC:3.4.22.-]
D RGE_39140 pcp; pyrrolidone-carboxylate peptidase Pcp K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RGE_30950 guaA; GMP synthase (glutamine-hydrolyzing) GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGE_26180 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGE_26240 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD K07010 K07010; putative glutamine amidotransferase
D RGE_37810 peptidase C26 family protein K07010 K07010; putative glutamine amidotransferase
D RGE_12600 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RGE_08280 gltB; NAD(P)H-dependent glutamate synthase large subunit GltB K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGE_05180 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGE_06970 putative asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGE_04200 asnB; asparagine synthase AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGE_04290 putative asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGE_04450 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGE_20880 pfpI; protease I PfpI K05520 yhbO; deglycase [EC:3.5.1.124]
D RGE_21070 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D RGE_25180 hypothetical protein K07052 K07052; CAAX protease family protein
D RGE_18470 pepN; aminopeptidase N PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RGE_23610 prlC; oligopeptidase A OpdA K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D RGE_21500 dcp; peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RGE_40040 pepF; oligoendopeptidase F PepF K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RGE_46270 putative metalloprotease K20273 zmpA; zinc metalloprotease ZmpA
D RGE_32170 peptidase M15C family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D RGE_25920 peptidase M15C family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D RGE_07770 peptidase M16B family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RGE_18260 putative M17 family peptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGE_29140 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGE_19020 peptidase M20A family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RGE_24030 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RGE_23830 map; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RGE_06680 map; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RGE_13200 aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RGE_10250 carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RGE_33230 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGE_13540 putative M48A family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RGE_09390 htpX; putative protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RGE_46430 peptidase M48 family protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D RGE_27320 ecfE; regulator of sigma E protease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RGE_38210 peptidase M50 family protein K16922 yydH; putative peptide zinc metalloprotease protein
D RGE_31690 hypothetical protein K09933 mtfA; MtfA peptidase
D RGE_41040 mucD; serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107]
D RGE_07360 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D RGE_10430 putative S1B family peptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RGE_21640 putative S1B family peptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RGE_04960 peptidase S8A family protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_03700 putative S8A family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_22320 putative S8A family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_10550 putative S8A family peptidase K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D RGE_21470 putative S9A family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RGE_45030 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RGE_47010 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RGE_44100 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGE_28020 pbpG; D-alanyl-D-alanine endopeptidase, PbpG K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RGE_04750 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RGE_08550 clpP; ATP-dependent Clp protease, protease subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RGE_27940 clpP; ATP-dependent Clp protease, protease subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RGE_07870 putative nucleoside-triphosphatase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RGE_27920 lon; ATP-dependent protease La, Lon K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RGE_23970 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RGE_41010 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGE_40510 pip; proline iminopeptidase Pip K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RGE_37630 ctpA; carboxyl-terminal processing protease CtpA K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RGE_33950 peptidase S41 family protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RGE_31330 peptidase S45 family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RGE_40870 putative S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D RGE_02090 sppA; protease 4 SppA K04773 sppA; protease IV [EC:3.4.21.-]
D RGE_34020 putative S54 family peptidase K07059 K07059; rhomboid family protein
D RGE_32120 ldcA; muramoyltetrapeptide carboxypeptidase LdcA K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RGE_05060 peptidase S66 family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RGE_43730 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RGE_21730 acyI; acylase Acy 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGE_37500 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGE_32960 putative U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D RGE_03850 putative peptidase, family U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D RGE_03840 putative U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D RGE_15220 tldE; protein TldE K03592 pmbA; PmbA protein
D RGE_00700 tldD; protein TldD K03568 tldD; TldD protein
D RGE_27480 hflC; protease activity modulator HflC K04087 hflC; modulator of FtsH protease HflC
D RGE_27490 hflK; protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rge01003]
D RGE_04210 glycosyl transferase, group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D RGE_24800 glycosyl transferase, group 1 K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D RGE_29060 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D RGE_42220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGE_08160 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGE_12210 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGE_10770 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RGE_04160 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RGE_10830 UDP-N-acetyl-D-mannosaminuronic acid transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RGE_24490 mdoH; glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D RGE_37700 glycosyltransferase 36 K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D RGE_10800 glycosyl transferase, group 1 K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
D RGE_05590 N-glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D RGE_23570 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rge01005]
D RGE_27270 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RGE_27260 lpxB; lipid-A-disaccharide synthase LpxB K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RGE_10100 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RGE_27290 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RGE_31680 lpxH; UDP-2,3-diacylglucosamine hydrolase LpxH K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RGE_32000 lpxK; tetraacyldisaccharide 4'-kinase LpxK K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RGE_05100 putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGE_05110 putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGE_35080 waaA; 3-deoxy-D-manno-octulosonic-acid transferase WaaA K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RGE_23080 putative transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGE_39150 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGE_15010 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase KdsA K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RGE_32020 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RGE_46970 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RGE_46980 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RGE_13730 rfaE; D-alpha,beta-D-heptose 7-phosphate 1-kinase RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RGE_13740 RfaE bifunctional protein, domain II K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RGE_13820 lipopolysaccharide heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RGE_13770 glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RGE_13720 gmhA; phosphoheptose isomerase GmhA K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RGE_00740 gmhA; phosphoheptose isomerase GmhA K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RGE_13750 gmhB; D,D-heptose 1,7-bisphosphate phosphatase GmhB K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RGE_43650 gmhB; D,D-heptose 1,7-bisphosphate phosphatase GmhB K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RGE_24880 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RGE_31750 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rge01011]
D RGE_08570 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGE_14110 murB; UDP-N-acetylmuramate dehydrogenase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGE_09550 murC; UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RGE_09520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGE_09490 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase MurE K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
D RGE_09560 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGE_01690 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D RGE_28850 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3]
D RGE_32120 ldcA; muramoyltetrapeptide carboxypeptidase LdcA K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RGE_05060 peptidase S66 family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RGE_09510 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGE_09540 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGE_13090 putative undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_35030 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_24940 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGE_13360 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RGE_08160 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGE_12210 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGE_46640 mrdA; penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGE_09480 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGE_44100 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGE_04750 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RGE_28020 pbpG; D-alanyl-D-alanine endopeptidase, PbpG K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RGE_42220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGE_21070 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D RGE_32170 peptidase M15C family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D RGE_25920 peptidase M15C family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D RGE_04910 putative lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RGE_02870 mltA; putative membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RGE_34610 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RGE_32760 mltD; membrane-bound lytic murein transglycosylase D MltD K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D RGE_26100 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RGE_01220 rlpA; rare lipoprotein A RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RGE_14790 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGE_42330 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rge01004]
D RGE_41120 fabD; malonyl CoA-acyl carrier protein transacylase, FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGE_41130 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3, FabH K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RGE_17260 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGE_41090 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II, FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGE_21750 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_29640 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_41110 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase, FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_42180 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_41310 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_09700 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_29800 short-chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGE_27280 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGE_28280 fabI; enoyl-[acyl-carrier-protein] reductase, FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGE_01470 thioesterase superfamily protein K17361 ACOT9; acyl-coenzyme A thioesterase 9 [EC:3.1.2.-]
D RGE_24150 esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RGE_09280 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D RGE_34180 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RGE_18530 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_18640 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGE_32650 prpE; propionate--CoA ligase PrpE K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RGE_06000 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30260 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_03600 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_07750 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46110 fadD; long-chain-fatty-acid-CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46900 putative long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30240 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_29820 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RGE_41140 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RGE_18580 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGE_41980 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGE_43640 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rge01008]
D RGE_38680 putative epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D RGE_43910 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:rge01006]
D RGE_16680 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RGE_33730 crtE; geranylgeranyl pyrophosphate synthetase CrtE K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RGE_42560 trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RGE_27350 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGE_27990 squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGE_33570 crtB; prephytoene pyrophosphate synthase CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGE_14570 miaA; tRNA dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RGE_33800 menA; 1,4-Dihydroxy-2-naphtoate prenyltransferase MenA K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RGE_00960 ubiA; 4-hydroxybenzoate octaprenyltransferase UbiA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RGE_41780 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D RGE_33410 bchG; geranylgeranyl bacteriochlorophyll synthase BchG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rge01007]
D RGE_12620 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGE_38590 glnS; glutaminyl-tRNA synthetase GlnS K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGE_13610 gluQ; glutamyl-Q tRNA(Asp) synthetase GluQ K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RGE_07630 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGE_34210 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RGE_31640 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGE_46000 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGE_36710 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGE_14020 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGE_33960 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGE_45160 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGE_41580 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGE_10940 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGE_27550 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGE_43670 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGE_43660 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGE_35310 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGE_42500 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGE_24520 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGE_34910 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGE_24560 pheS; phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGE_24570 pheT; phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGE_30830 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGE_32600 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RGE_01740 tyrB; aromatic amino acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_15380 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGE_29190 ybdL; aminotransferase YbdL K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D RGE_24060 dapC; acetylornithine/succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RGE_08600 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_25530 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_28890 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGE_26220 beta-alanine-pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGE_25310 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGE_14870 argD; acetylornithine aminotransferase ArgD K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RGE_13330 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGE_37050 aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGE_26260 spuC; putative aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RGE_11320 aminotransferase class-III K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64]
D RGE_11180 hemL; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RGE_42140 hemL; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RGE_44090 putative aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RGE_01640 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_12190 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGE_40440 putative aminotransferase family protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RGE_31460 phnW; 2-aminoethylphosphonate-pyruvate transaminase PhnW K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D RGE_11820 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGE_41550 putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D RGE_41280 per; putative perosamine synthetase Per K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450 [BR:rge00199]
D RGE_22720 cypC; fatty-acid peroxygenase, cytochrome P450 CypC K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:rge00194]
D RGE_02220 atpC; ATP synthase epsilon chain AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RGE_02230 atpD; ATP synthase subunit beta AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RGE_02240 atpG; ATP synthase gamma chain AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RGE_02250 atpA; ATP synthase subunit alpha AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RGE_02260 atpH; ATP synthase subunit delta AtpH K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RGE_02270 atpF; ATP synthase subunit b AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGE_02280 atpE; ATP synthase subunit c AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RGE_02290 atpB; ATP synthase subunit a AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGE_02300 atpI; ATP synthase protein I AtpI K02116 atpI; ATP synthase protein I
D RGE_33630 pufL; photosynthesis reaction center complex, L subunit PufL K08928 pufL; photosynthetic reaction center L subunit
D RGE_33620 pufM; photosynthesis reaction center complex, M subunit PufM K08929 pufM; photosynthetic reaction center M subunit
D RGE_33520 puhA; H subunit of photosynthetic reaction center PuhA K13991 puhA; photosynthetic reaction center H subunit
D RGE_33610 pufC; photosynthesis reaction center complex, subunit C PufC K13992 pufC; photosynthetic reaction center cytochrome c subunit
D RGE_33640 pufA; alpha subunit of light-harvesting 1 (B870) complex PufA K08926 pufA; light-harvesting complex 1 alpha chain
D RGE_33650 antenna complex, beta subunit family protein K08927 pufB; light-harvesting complex 1 beta chain
D RGE_33660 pufB; beta subunit of light-harvesting 1 (B870) complex PufB K08927 pufB; light-harvesting complex 1 beta chain
D RGE_28720 pucB; light-harvesting protein B-800/850 beta chain PucB K08939 pucB; light-harvesting protein B-800-850 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rge03000]
D RGE_45390 eutR; ethanolamine operon transcriptional activator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D RGE_05900 ybtA; transcriptional regulator YbtA K05372 ybtA; AraC family transcriptional regulator
D RGE_21230 transcriptional regulator, AraC family K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D RGE_13560 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D RGE_11600 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D RGE_35110 ada_alkA; DNA-O6-methylguanine-protein-cysteine S-methyltransferase/DNA-3-methyladenine glycosylase Ada/AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGE_11650 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RGE_04920 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RGE_20650 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RGE_02730 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RGE_00880 oxyR; DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RGE_07470 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RGE_08930 transcriptional regulator, LysR family K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D RGE_29180 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D RGE_19450 transcriptional regulator, LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D RGE_46170 transcriptional regulator, LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D RGE_12170 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D RGE_26610 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D RGE_05240 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D RGE_09300 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RGE_36070 cbbR; HTH-type transcriptional regulator CbbR K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RGE_17690 rbsR; ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RGE_32510 gntR; transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RGE_38110 hutC; transcriptional regulator, histidine utilization repressor, GntR family HutC K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RGE_12250 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D RGE_14670 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RGE_35550 lldR; L-lactate dehydrogenase operon regulatory protein LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D RGE_30790 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RGE_29770 tetR; transcriptional regulator, TetR family K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D RGE_16480 transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D RGE_32260 transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D RGE_10320 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D RGE_01100 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D RGE_12630 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D RGE_10020 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_43960 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_44690 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_32370 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_00820 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_26210 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_02830 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_05170 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_14860 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_30060 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RGE_24000 ohrR; organic hydroperoxide resistance transcriptional regulator OhrR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RGE_36210 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RGE_44890 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RGE_05870 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RGE_45110 fur; ferric uptake regulation protein Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RGE_21350 transcriptional regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D RGE_38330 transcriptional regulator, IclR family protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RGE_03030 transcriptional regulator, IclR family K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor
D RGE_21900 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_37020 crp; catabolite gene activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_34140 crp; transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_29210 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_07760 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_00780 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGE_00530 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RGE_31860 fnrL; CRP/FNR family transcriptional regulator, anaerobic regulatory protein FnrL K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RGE_22820 cooA; putative Crp family transcriptional regulator CooA K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator
D RGE_07150 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D RGE_39940 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D RGE_02740 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RGE_15410 iscR; HTH-type transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RGE_21360 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D RGE_20800 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RGE_19280 transcriptional regulator, Xre family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D RGE_08360 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RGE_44740 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RGE_10220 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RGE_00100 transcriptional regulator, Xre family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RGE_29990 transcriptional regulator, Xre family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D RGE_35650 sigma54-dependent DNA-binding transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RGE_11800 sigma54-dependent DNA-binding transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RGE_40300 transcriptional regulator, TyrR family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RGE_43170 nifA; nitrogen fixation specific regulatory protein NifA K02584 nifA; Nif-specific regulatory protein
D RGE_06260 modE; molybdenum transport protein ModE K02019 modE; molybdate transport system regulatory protein
D RGE_06270 modG; molybdenum-pterin binding protein K02019 modE; molybdate transport system regulatory protein
D RGE_20860 putative ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D RGE_29300 nikR; putative nickel-responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D RGE_00830 putA; proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RGE_19200 nosR; regulatory protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D RGE_11340 frmR; transcriptional repressor FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D RGE_46290 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RGE_24280 hypothetical protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RGE_30020 putative ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGE_00620 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGE_08820 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RGE_26720 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RGE_27730 PspC domain protein K03973 pspC; phage shock protein C
D RGE_23500 rnk; transcription elongation factor Rnk K06140 rnk; regulator of nucleoside diphosphate kinase
D RGE_42010 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RGE_30030 putative AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D RGE_16350 hypothetical protein K07733 alpA; prophage regulatory protein
D RGE_42030 hypothetical protein K07735 algH; putative transcriptional regulator
D RGE_43710 dksA; putative DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RGE_45920 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RGE_38970 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RGE_09450 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rge03021]
D RGE_37110 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RGE_03560 rpoA; DNA-directed RNA polymerase subunit alpha RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGE_03200 rpoB; DNA-directed RNA polymerase subunit beta RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGE_03210 rpoC; DNA-directed RNA polymerase subunit beta' RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGE_35670 rpoZ; DNA-directed RNA polymerase subunit omega RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RGE_27060 rpoD; RNA polymerase primary sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RGE_33330 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D RGE_41070 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGE_30500 RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RGE_30530 RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RGE_30470 RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RGE_30560 RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RGE_41760 rpoH; RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RGE_25170 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RGE_46050 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RGE_19720 lafS; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D RGE_17140 filA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D RGE_45970 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RGE_28250 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RGE_39080 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D RGE_03150 nusG; transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D RGE_10510 sspA; stringent starvation protein A SspA K03599 sspA; stringent starvation protein A
D RGE_10520 sspB; stringent starvation protein B SspB K03600 sspB; stringent starvation protein B
D RGE_14630 putative sensor kinase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RGE_26400 putative hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D RGE_37460 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
D RGE_41060 rseA; putative anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D RGE_41050 rseB; sigma-E factor negative regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D RGE_43710 dksA; putative DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RGE_45920 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RGE_33280 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RGE_35710 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D RGE_33100 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rge03019]
D RGE_40920 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGE_38470 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RGE_40990 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGE_27430 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGE_45260 guanyl-specific ribonuclease Sa-like protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RGE_13550 orn; oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RGE_24250 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGE_38370 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGE_41210 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGE_22330 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGE_46360 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGE_14990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGE_15530 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RGE_33100 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RGE_27120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGE_43190 groEL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGE_27510 hfq; protein Hfq K03666 hfq; host factor-I protein
D RGE_33850 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGE_33860 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGE_05000 putative polyphosphate kinase 2 family protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGE_02210 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGE_13400 pcnB; poly(A) polymerase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RGE_42510 rppH; RNA pyrophosphohydrolase RppH K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RGE_32360 rraA; regulator of ribonuclease activity A RraA K02553 rraA; regulator of ribonuclease activity A
D RGE_08790 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D RGE_26970 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rge03011]
D RGE_13870 rpsA; 30S ribosomal protein S1 RpsA K02945 RP-S1; small subunit ribosomal protein S1
D RGE_27390 rpsB; 30S ribosomal protein S2 RpsB K02967 RP-S2; small subunit ribosomal protein S2
D RGE_03350 rpsC; 30S ribosomal protein S3 RpsC K02982 RP-S3; small subunit ribosomal protein S3
D RGE_03550 rpsD; 30S ribosomal protein S4 RpsD K02986 RP-S4; small subunit ribosomal protein S4
D RGE_03470 rpsE; 30S ribosomal protein S5 RpsE K02988 RP-S5; small subunit ribosomal protein S5
D RGE_27200 rpsF; 30S ribosomal protein S6 RpsF K02990 RP-S6; small subunit ribosomal protein S6
D RGE_03250 rpsG; 30S ribosomal protein S7 RpsG K02992 RP-S7; small subunit ribosomal protein S7
D RGE_03440 rpsH; 30S ribosomal protein S8 RpsH K02994 RP-S8; small subunit ribosomal protein S8
D RGE_07590 rpsI; 30S ribosomal protein S9 RpsI K02996 RP-S9; small subunit ribosomal protein S9
D RGE_03280 rpsJ; 30S ribosomal protein S10 RpsJ K02946 RP-S10; small subunit ribosomal protein S10
D RGE_03540 rpsK; 30S ribosomal protein S11 RpsK K02948 RP-S11; small subunit ribosomal protein S11
D RGE_03240 rpsL; 30S ribosomal protein S12 RpsL K02950 RP-S12; small subunit ribosomal protein S12
D RGE_03530 rpsM; 30S ribosomal protein S13 RpsM K02952 RP-S13; small subunit ribosomal protein S13
D RGE_03430 rpsN; 30S ribosomal protein S14 RpsN K02954 RP-S14; small subunit ribosomal protein S14
D RGE_15520 rpsO; 30S ribosomal protein S15 RpsO K02956 RP-S15; small subunit ribosomal protein S15
D RGE_13470 rpsP; 30S ribosomal protein S16 RpsP K02959 RP-S16; small subunit ribosomal protein S16
D RGE_03380 rpsQ; 30S ribosomal protein S17 RpsQ K02961 RP-S17; small subunit ribosomal protein S17
D RGE_27180 rpsR; 30S ribosomal protein S18 RpsR K02963 RP-S18; small subunit ribosomal protein S18
D RGE_03330 rpsS; 30S ribosomal protein S19 RpsS K02965 RP-S19; small subunit ribosomal protein S19
D RGE_13350 rpsT; 30S ribosomal protein S20 RpsT K02968 RP-S20; small subunit ribosomal protein S20
D RGE_15280 rpsU; 30S ribosomal protein S21 RpsU K02970 RP-S21; small subunit ribosomal protein S21
D RGE_03170 rplA; 50S ribosomal protein L1 RplA K02863 RP-L1; large subunit ribosomal protein L1
D RGE_03320 rplB; 50S ribosomal protein L2 RplB K02886 RP-L2; large subunit ribosomal protein L2
D RGE_03290 rplC; 50S ribosomal protein L3 RplC K02906 RP-L3; large subunit ribosomal protein L3
D RGE_03300 rplD; 50S ribosomal protein L4 RplD K02926 RP-L4; large subunit ribosomal protein L4
D RGE_03420 rplE; 50S ribosomal protein L5 RplE K02931 RP-L5; large subunit ribosomal protein L5
D RGE_03450 rplF; 50S ribosomal protein L6 RplF K02933 RP-L6; large subunit ribosomal protein L6
D RGE_27170 rplI; 50S ribosomal protein L9 RplI K02939 RP-L9; large subunit ribosomal protein L9
D RGE_03180 rplJ; 50S ribosomal protein L10 RplJ K02864 RP-L10; large subunit ribosomal protein L10
D RGE_03160 rplK; 50S ribosomal protein L11 RplK K02867 RP-L11; large subunit ribosomal protein L11
D RGE_03190 rplL; 50S ribosomal protein L7/L12 RplL K02935 RP-L7; large subunit ribosomal protein L7/L12
D RGE_07580 rplM; 50S ribosomal protein L13 RplM K02871 RP-L13; large subunit ribosomal protein L13
D RGE_03400 rplN; 50S ribosomal protein L14 RplN K02874 RP-L14; large subunit ribosomal protein L14
D RGE_03490 rplO; 50S ribosomal protein L15 RplO K02876 RP-L15; large subunit ribosomal protein L15
D RGE_03360 rplP; 50S ribosomal protein L16 RplP K02878 RP-L16; large subunit ribosomal protein L16
D RGE_03570 rplQ; 50S ribosomal protein L17 RplQ K02879 RP-L17; large subunit ribosomal protein L17
D RGE_03460 rplR; 50S ribosomal protein L18 RplR K02881 RP-L18; large subunit ribosomal protein L18
D RGE_13500 rplS; 50S ribosomal protein L19 RplS K02884 RP-L19; large subunit ribosomal protein L19
D RGE_24550 rplT; 50S ribosomal protein L20 RplT K02887 RP-L20; large subunit ribosomal protein L20
D RGE_42550 rplU; 50S ribosomal protein L21 RplU K02888 RP-L21; large subunit ribosomal protein L21
D RGE_03340 rplV; 50S ribosomal protein L22 RplV K02890 RP-L22; large subunit ribosomal protein L22
D RGE_03310 rplW; 50S ribosomal protein L23 RplW K02892 RP-L23; large subunit ribosomal protein L23
D RGE_03410 rplX; 50S ribosomal protein L24 RplX K02895 RP-L24; large subunit ribosomal protein L24
D RGE_42540 rpmA; 50S ribosomal protein L27 RpmA K02899 RP-L27; large subunit ribosomal protein L27
D RGE_34160 rpmB; 50S ribosomal protein L28 RpmB K02902 RP-L28; large subunit ribosomal protein L28
D RGE_03370 rpmC; 50S ribosomal protein L29 RpmC K02904 RP-L29; large subunit ribosomal protein L29
D RGE_03480 rpmD; 50S ribosomal protein L30 RpmD K02907 RP-L30; large subunit ribosomal protein L30
D RGE_33110 rpmE; 50S ribosomal protein L31 type B RpmE K02909 RP-L31; large subunit ribosomal protein L31
D RGE_41150 rpmF; 50S ribosomal protein L32 RpmF K02911 RP-L32; large subunit ribosomal protein L32
D RGE_34170 rpmG; 50S ribosomal protein L33 RpmG K02913 RP-L33; large subunit ribosomal protein L33
D RGE_47060 rpmH; 50S ribosomal protein L34 RpmH K02914 RP-L34; large subunit ribosomal protein L34
D RGE_24540 rpmI; 50S ribosomal protein L35 RpmI K02916 RP-L35; large subunit ribosomal protein L35
D RGE_03520 rpmJ; 50S ribosomal protein L36 RpmJ K02919 RP-L36; large subunit ribosomal protein L36
D RGE_08700 rplY; 50S ribosomal protein L25 RplY K02897 RP-L25; large subunit ribosomal protein L25
D RGE_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGE_r0070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGE_r0040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGE_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGE_r0080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGE_r0050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rge03009]
D RGE_40990 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGE_13550 orn; oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RGE_40980 era; GTPase Era K03595 era; GTPase
D RGE_42530 obg; GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RGE_43710 dksA; putative DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RGE_45920 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RGE_28250 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RGE_39080 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D RGE_03150 nusG; transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D RGE_14050 rsuA; ribosomal small subunit pseudouridine synthase A RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RGE_45290 rsmA; ribosomal RNA small subunit methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RGE_44640 sun; Sun domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RGE_34190 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RGE_08650 putative RNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RGE_46090 rsmE; ribosomal RNA small subunit methyltransferase E RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RGE_00570 rsmG; ribosomal RNA small subunit methyltransferase G RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RGE_09460 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RGE_41180 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RGE_00720 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RGE_32790 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RGE_33250 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RGE_38490 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RGE_05150 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RGE_01020 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RGE_46060 putative RNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D RGE_21390 radical SAM domain-containing protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RGE_27590 rlmN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RGE_33320 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RGE_14260 rluA; ribosomal large subunit pseudouridine synthase A RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RGE_27610 rluB; ribosomal large subunit pseudouridine synthase B RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RGE_40900 rluC; ribosomal large subunit pseudouridine synthase C RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RGE_27630 rluD; ribosomal large subunit pseudouridine synthase D RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RGE_14590 rluF; ribosomal large subunit pseudouridine synthase F RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RGE_04770 rimI; ribosomal-protein-alanine acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RGE_37160 rimJ; ribosomal-protein-alanine acetyltransferase RimJ K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RGE_13480 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RGE_31050 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RGE_42270 prmA; ribosomal protein L11 methyltransferase PrmA K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RGE_24020 putative methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RGE_34850 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D RGE_40920 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGE_38470 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RGE_42020 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RGE_38380 dbpA; ATP-independent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D RGE_14270 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RGE_13530 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RGE_27520 engA; GTP-binding protein EngA K03977 engA; GTPase
D RGE_27500 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D RGE_04700 Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RGE_35700 spoT; GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate) 3'-pyrophosphohydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGE_28230 rbfA; ribosome-binding factor A RbfA K02834 rbfA; ribosome-binding factor A
D RGE_28260 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RGE_37140 hypothetical protein K14761 rlbA; ribosome-associated protein
D RGE_38500 hypothetical protein K09710 ybeB; ribosome-associated protein
D RGE_44180 putative rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D RGE_33260 hypothetical protein K07574 yhbY; RNA-binding protein
D RGE_15210 hypothetical protein K09889 yjgA; ribosome-associated protein
D RGE_45080 yfiA; sigma-54 modulation protein YfiA K05808 hpf; ribosome hibernation promoting factor
D RGE_41720 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D RGE_41160 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rge03016]
D RGE_45260 guanyl-specific ribonuclease Sa-like protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RGE_04880 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RGE_12620 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGE_42500 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGE_14020 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGE_45160 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGE_36710 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGE_38590 glnS; glutaminyl-tRNA synthetase GlnS K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGE_46000 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGE_41580 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGE_10940 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGE_34910 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGE_24520 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGE_35310 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGE_31640 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGE_33960 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGE_27550 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGE_24560 pheS; phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGE_24570 pheT; phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGE_07630 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGE_34210 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RGE_07650 dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RGE_02380 threonyl and alanyl tRNA synthetase domain protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D RGE_10390 putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RGE_35020 trmB; tRNA (guanine-N(7)-)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RGE_12520 truA; tRNA pseudouridine synthase A TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RGE_28220 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RGE_15420 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_42750 nifS; nitrogenase metalloclusters biosynthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_43040 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_04700 Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RGE_14570 miaA; tRNA dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RGE_47020 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RGE_00560 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RGE_03920 selD; selenophosphate synthase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RGE_31250 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RGE_47050 ribosomal protein S5 domain protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RGE_rnp0010 ribonuclease P RNA component K01978 rnpB; M1 RNA
D RGE_35480 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RGE_42190 ribonuclease II (RNB)-like protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D RGE_00240 ligT; 2'-5' RNA ligase LigT K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RGE_24230 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D RGE_43670 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGE_43660 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGE_13610 gluQ; glutamyl-Q tRNA(Asp) synthetase GluQ K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RGE_32130 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RGE_26390 dusA; tRNA-dihydrouridine synthase A DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RGE_10230 dusB; tRNA-dihydrouridine synthase B DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RGE_18250 dusC; tRNA-dihydrouridine synthase C DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D RGE_42410 miaB; tRNA-i(6)A37 modification enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RGE_15180 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RGE_13490 trmD; tRNA (guanine-N1-)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RGE_41900 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RGE_27240 tRNA/rRNA methyltransferase protein K03437 spoU; RNA methyltransferase, TrmH family
D RGE_14260 rluA; ribosomal large subunit pseudouridine synthase A RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RGE_46850 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RGE_04830 putative TtcA family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RGE_33990 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RGE_15440 iscA; iron-sulfur cluster assembly scaffold protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D RGE_43070 iscA; iron-sulfur cluster assembly scaffold protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D RGE_42690 putative iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D RGE_26110 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D RGE_16180 putative oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D RGE_00990 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RGE_00120 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RGE_24090 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RGE_14810 putative 4Fe-4S cluster-binding ferredoxin protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RGE_23810 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D RGE_01000 tgt; queuine tRNA-ribosyltransferase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RGE_31610 tilS; tRNA(Ile)-lysidine synthase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RGE_04760 peptidase M22 family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RGE_15490 gcp; putative O-sialoglycoprotein endopeptidase Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RGE_14800 putative ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RGE_11140 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RGE_27430 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGE_15530 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rge03012]
D RGE_16550 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D RGE_28240 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RGE_24530 infC; translation initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3
D RGE_24010 putative ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RGE_27380 tsf; elongation factor EF-Ts Tsf K02357 tsf; elongation factor Ts
D RGE_03130 tuf; elongation factor Tu Tuf K02358 tuf; elongation factor Tu
D RGE_03270 tufA; elongation factor EF-Tu TufA K02358 tuf; elongation factor Tu
D RGE_03260 fusA; elongation factor EF-G FusA K02355 fusA; elongation factor G
D RGE_05400 fusA; elongation factor G FusA K02355 fusA; elongation factor G
D RGE_43860 elongation factor G K02355 fusA; elongation factor G
D RGE_11370 selB; selenocysteine-specific elongation factor SelB K03833 selB; selenocysteine-specific elongation factor
D RGE_42440 prfA; peptide chain release factor RF-1 PrfA K02835 prfA; peptide chain release factor 1
D RGE_27360 rrf; ribosome recycling factor Rrf K02838 frr; ribosome recycling factor
D RGE_42450 hemK; protein methyltransferase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RGE_08690 pth; peptidyl-tRNA hydrolase Pth K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RGE_03510 infA; translation initiation factor IF-1 InfA K02518 infA; translation initiation factor IF-1
D RGE_38020 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RGE_16200 efp; elongation factor P Efp K02356 efp; elongation factor P
D RGE_18490 prfB; peptide chain release factor RF-2 PrfB K02836 prfB; peptide chain release factor 2
D RGE_00920 prfC; peptide chain release factor RF-3 PrfC K02837 prfC; peptide chain release factor 3
D RGE_01680 class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rge03110]
D RGE_31700 clpA; ATP-dependent Clp protease K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RGE_32530 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RGE_27930 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RGE_43740 hslU; ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RGE_07530 htpG; heat shock protein 90 HtpG K04079 HSP90A; molecular chaperone HtpG
D RGE_27120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGE_15470 hscA; chaperone protein HscA homolog K04044 hscA; molecular chaperone HscA
D RGE_43080 hscA; chaperone protein HscA homolog K04044 hscA; molecular chaperone HscA
D RGE_01120 molecular chaperone, Hsp70 class K04046 yegD; hypothetical chaperone protein
D RGE_43190 groEL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGE_27130 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGE_22020 cbpA; curved DNA-binding protein CbpA K05516 cbpA; curved DNA-binding protein
D RGE_15460 hscB; co-chaperone protein HscB homolog K04082 hscB; molecular chaperone HscB
D RGE_14950 hslO; 33 kDa chaperonin HslO K04083 hslO; molecular chaperone Hsp33
D RGE_27110 grpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D RGE_21920 putative small heat-shock protein K13993 HSP20; HSP20 family protein
D RGE_21940 putative small heat-shock protein K13993 HSP20; HSP20 family protein
D RGE_21930 putative small heat-shock protein K13993 HSP20; HSP20 family protein
D RGE_27100 hslR; ribosome-associated heat shock protein Hsp15, HslR K04762 hslR; ribosome-associated heat shock protein Hsp15
D RGE_43180 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D RGE_41040 mucD; serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107]
D RGE_07360 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D RGE_33230 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGE_02290 atpB; ATP synthase subunit a AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGE_41920 secB; preprotein translocase SecB subunit K03071 secB; preprotein translocase subunit SecB
D RGE_35190 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D RGE_44230 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D RGE_35870 hypA; hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RGE_35880 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RGE_20290 dmsD; twin-arginine leader-binding protein DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D RGE_07280 torD; cytoplasmic chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D RGE_04960 peptidase S8A family protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_03700 putative S8A family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_22320 putative S8A family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RGE_10550 putative S8A family peptidase K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D RGE_31660 ppiA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RGE_31670 ppiB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RGE_16260 ppiD; putative peptidyl-prolyl cis-trans isomerase PpiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RGE_38610 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RGE_13600 peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RGE_35330 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase FkpB K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D RGE_34860 putative FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RGE_24270 putative isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RGE_45300 surA; chaperone/peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RGE_21760 thioredoxin domain protein K03671 TXN; thioredoxin
D RGE_33090 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D RGE_30410 thioredoxin domain protein K03671 TXN; thioredoxin
D RGE_21430 thioredoxin domain protein K03671 TXN; thioredoxin
D RGE_46770 trxC; thioredoxin-2 TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D RGE_00840 thioredoxin domain protein K05838 ybbN; putative thioredoxin
D RGE_41930 grxC; glutaredoxin-3 GrxC K03676 grxC; glutaredoxin 3
D RGE_42470 grxD; glutaredoxin-4 K07390 grxD; monothiol glutaredoxin
D RGE_00480 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D RGE_46020 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RGE_34710 putative disulfide oxidoreductase K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D RGE_41660 dsbC; putative thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RGE_02700 ccmG; cytochrome c-type biogenesis protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D RGE_22120 ccmG; cytochrome c-type biogenesis protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rge04131]
D RGE_27600 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGE_09210 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RGE_44760 cbbG; glyceraldehyde-3-phosphate dehydrogenase CbbG K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGE_41950 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_22610 putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGE_04640 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGE_07530 htpG; heat shock protein 90 HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rge03051]
D RGE_07530 htpG; heat shock protein 90 HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rge03032]
D RGE_32730 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RGE_23030 putative nucleoside-triphosphatase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D RGE_16250 hupB; DNA-binding protein HU-beta HupB K03530 hupB; DNA-binding protein HU-beta
D RGE_24580 ihfA; integration host factor subunit alpha IhfA K04764 ihfA; integration host factor subunit alpha
D RGE_13860 ihfB; integration host factor subunit beta IhfB K05788 ihfB; integration host factor subunit beta
D RGE_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGE_27160 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RGE_27040 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D RGE_46350 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D RGE_13680 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGE_00020 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGE_29130 holC; putative DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGE_45180 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGE_26080 holB; DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGE_43320 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_18670 dnaQ; DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_33000 dnaX; DNA polymerase III gamma/tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGE_27250 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RGE_33870 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGE_24120 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGE_13380 hda; DnaA-homolog protein Hda K10763 hda; DnaA-homolog protein
D RGE_13920 gyrA; DNA gyrase subunit A GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGE_00030 gyrB; DNA gyrase subunit B GyrB K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGE_34730 parC; topoisomerase IV subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGE_34760 parE; topoisomerase IV subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGE_24810 putative DNA topoisomerase, type I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RGE_44720 topB; DNA topoisomerase III TopB K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rge03036]
D RGE_40990 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGE_18070 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_01920 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_11700 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_05760 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_27020 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_16250 hupB; DNA-binding protein HU-beta HupB K03530 hupB; DNA-binding protein HU-beta
D RGE_24580 ihfA; integration host factor subunit alpha IhfA K04764 ihfA; integration host factor subunit alpha
D RGE_13860 ihfB; integration host factor subunit beta IhfB K05788 ihfB; integration host factor subunit beta
D RGE_22020 cbpA; curved DNA-binding protein CbpA K05516 cbpA; curved DNA-binding protein
D RGE_22030 cbpM; chaperone modulatory protein CbpM K18997 cbpM; chaperone modulatory protein CbpM
D RGE_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGE_00910 ferritin, Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RGE_10220 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RGE_27510 hfq; protein Hfq K03666 hfq; host factor-I protein
D RGE_07470 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RGE_10020 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_43960 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_44690 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_32370 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_00820 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_26210 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_02830 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_05170 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_14860 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGE_24100 smc; chromosome partition protein SMC K03529 smc; chromosome segregation protein
D RGE_36790 scpA; segregation and condensation protein A ScpA K05896 scpA; segregation and condensation protein A
D RGE_27620 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D RGE_09580 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RGE_14980 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D RGE_09480 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGE_34130 ftsK; cell division FtsK transmembrane protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RGE_09470 ftsL; putative cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RGE_09570 ftsQ; polypeptide-transport-associated domain protein, FtsQ-type K03589 ftsQ; cell division protein FtsQ
D RGE_09530 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RGE_09590 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGE_15330 hypothetical protein K09888 zapA; cell division protein ZapA
D RGE_15340 hypothetical protein K09892 zapB; cell division protein ZapB
D RGE_42650 yacF; protein YacF K18778 zapD; cell division protein ZapD
D RGE_27690 putative AFG1 ATPase family protein K06916 zapE; cell division protein ZapE
D RGE_14790 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGE_09030 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32250 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_16450 mexA; multidrug resistance protein MexA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32720 multidrug efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_21840 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_15870 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_38190 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_37350 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RGE_37340 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RGE_37330 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RGE_10320 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D RGE_46670 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RGE_46660 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RGE_46650 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D RGE_46630 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RGE_00580 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RGE_38650 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RGE_36820 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RGE_30020 putative ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGE_00620 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGE_34730 parC; topoisomerase IV subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGE_34760 parE; topoisomerase IV subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGE_00560 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RGE_00570 rsmG; ribosomal RNA small subunit methyltransferase G RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RGE_05140 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RGE_14850 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RGE_36700 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RGE_43210 engB; ribosome biogenesis GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rge03400]
D RGE_35120 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RGE_42040 phr; deoxyribodipyrimidine photo-lyase Phr K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RGE_03120 ung; uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RGE_08770 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RGE_15350 nth; endonuclease III Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGE_37110 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RGE_10350 putative hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGE_12870 putative hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGE_12920 putative hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGE_34870 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGE_00210 putative deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RGE_00940 putative uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGE_04780 putative uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGE_31630 alkA; DNA-3-methyladenine glycosylase II AlkA K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGE_35110 ada_alkA; DNA-O6-methylguanine-protein-cysteine S-methyltransferase/DNA-3-methyladenine glycosylase Ada/AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGE_08750 mutM; formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RGE_14460 xthA; exodeoxyribonuclease III XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGE_46730 exoA; exodeoxyribonuclease ExoA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGE_21590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGE_24120 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGE_33870 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGE_43250 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D RGE_46390 uvrA; UvrABC system protein A UvrA K03701 uvrA; excinuclease ABC subunit A
D RGE_15390 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D RGE_16220 uvrC; UvrABC system protein C UvrC K03703 uvrC; excinuclease ABC subunit C
D RGE_18140 putative ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGE_33910 uvrD; DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGE_03200 rpoB; DNA-directed RNA polymerase subunit beta RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGE_03210 rpoC; DNA-directed RNA polymerase subunit beta' RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGE_03560 rpoA; DNA-directed RNA polymerase subunit alpha RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGE_35670 rpoZ; DNA-directed RNA polymerase subunit omega RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RGE_26920 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RGE_15160 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RGE_14740 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RGE_12150 sbcB; exodeoxyribonuclease I SbcB K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RGE_31970 xseA_sodB; exodeoxyribonuclease 7 large subunit/superoxide dismutase K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RGE_16670 xseB; exodeoxyribonuclease 7 small subunit XseB K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RGE_13680 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGE_00020 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGE_29130 holC; putative DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGE_45180 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGE_26080 holB; DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGE_43320 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_18670 dnaQ; DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGE_33000 dnaX; DNA polymerase III gamma/tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGE_46350 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D RGE_37530 recB; exodeoxyribonuclease V beta chain RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RGE_37520 recC; exodeoxyribonuclease V gamma chain RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RGE_37540 recD; exodeoxyribonuclease V alpha chain RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RGE_46600 recA; protein RecA K03553 recA; recombination protein RecA
D RGE_44220 rubA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RGE_44240 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RGE_10140 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RGE_02130 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RGE_27190 priB; primosomal replication protein N PriB K02686 priB; primosomal replication protein N
D RGE_01670 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RGE_00980 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGE_40970 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RGE_32980 recR; recombination protein RecR K06187 recR; recombination protein RecR
D RGE_08800 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RGE_44390 rdgC; recombination-associated exonuclease RdgC K03554 rdgC; recombination associated protein RdgC
D RGE_06830 cas1; CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RGE_38550 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RGE_37590 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D RGE_26430 ligD; ATP-dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RGE_13920 gyrA; DNA gyrase subunit A GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGE_00030 gyrB; DNA gyrase subunit B GyrB K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGE_24810 putative DNA topoisomerase, type I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RGE_16250 hupB; DNA-binding protein HU-beta HupB K03530 hupB; DNA-binding protein HU-beta
D RGE_10220 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RGE_24580 ihfA; integration host factor subunit alpha IhfA K04764 ihfA; integration host factor subunit alpha
D RGE_13860 ihfB; integration host factor subunit beta IhfB K05788 ihfB; integration host factor subunit beta
D RGE_22330 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGE_46360 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGE_18070 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_01920 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_11700 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_05760 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_27020 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGE_36520 dinP; DNA-directed DNA polymerase DinP K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RGE_23970 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RGE_18100 hypothetical protein K14160 imuA; protein ImuA
D RGE_34260 hypothetical protein K14160 imuA; protein ImuA
D RGE_18090 hypothetical protein K14161 imuB; protein ImuB
D RGE_34230 hypothetical protein K14161 imuB; protein ImuB
D RGE_13120 dnaE; error-prone DNA polymerase DnaE K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RGE_18080 dnaE; error-prone DNA polymerase DnaE K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RGE_46590 recX; recombination regulator RecX K03565 recX; regulatory protein
D RGE_02690 pcrA; ATP-dependent DNA helicase PcrA K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D RGE_27650 putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RGE_17940 putative ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RGE_37840 putative ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RGE_23000 nrdJ; vitamin B12-dependent ribonucleoside-diphosphate reductase NrdJ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGE_42320 nrdA; ribonucleoside-diphosphate reductase, alpha subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGE_42310 nrdB; ribonucleoside-diphosphate reductase, beta subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rge03029]
D RGE_10490 petB; cytochrome b PetB K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGE_28240 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RGE_24530 infC; translation initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3
D RGE_27380 tsf; elongation factor EF-Ts Tsf K02357 tsf; elongation factor Ts
D RGE_03130 tuf; elongation factor Tu Tuf K02358 tuf; elongation factor Tu
D RGE_03270 tufA; elongation factor EF-Tu TufA K02358 tuf; elongation factor Tu
D RGE_03260 fusA; elongation factor EF-G FusA K02355 fusA; elongation factor G
D RGE_05400 fusA; elongation factor G FusA K02355 fusA; elongation factor G
D RGE_43860 elongation factor G K02355 fusA; elongation factor G
D RGE_20940 ATP-dependent RNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D RGE_40980 era; GTPase Era K03595 era; GTPase
D RGE_07630 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGE_45160 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGE_10940 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGE_46000 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGE_27400 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGE_01840 putative amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGE_46690 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGE_46700 gatB; putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RGE_46680 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RGE_46350 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D RGE_27310 yaeT; outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family
D RGE_27120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGE_27110 grpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D RGE_43190 groEL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGE_43180 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D RGE_27130 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGE_15420 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_42750 nifS; nitrogenase metalloclusters biosynthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_43040 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_15460 hscB; co-chaperone protein HscB homolog K04082 hscB; molecular chaperone HscB
D RGE_42470 grxD; glutaredoxin-4 K07390 grxD; monothiol glutaredoxin
D RGE_00480 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D RGE_36700 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RGE_41780 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D RGE_41850 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RGE_41790 ctaA; cytochrome oxidase assembly CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGE_47030 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGE_41810 surf1; cytochrome oxidase assembly protein, SurF1 related K14998 SURF1; surfeit locus 1 family protein
D RGE_41770 senC; electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D RGE_07530 htpG; heat shock protein 90 HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rge02000]
D RGE_05940 ybtP; iron ABC transporter permease/ATP-binding protein YbtP K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RGE_05950 ybtQ; iron ABC transporter permease/ATP-binding protein YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RGE_13830 msbA; lipid A ABC transporter permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RGE_09290 ABC transporter permease/ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RGE_38880 ABC transporter permease/ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGE_14510 putative ABC transporter permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGE_40130 ABC transporter permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGE_12680 putative ABC transporter permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGE_27850 macB; macrolide ABC transporter permease/ATP-binding protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D RGE_02440 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D RGE_46230 cysP; sulfate ABC transporter, periplasmic sulfate-binding protein CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RGE_46220 cysT; sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RGE_46210 cysW; sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RGE_46200 cysA; sulfate ABC transporter, ATPase subunit CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RGE_06250 modA; molybdenum ABC transporter, periplasmic molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D RGE_06240 modB; molybdenum ABC transporter, permease protein ModB K02018 modB; molybdate transport system permease protein
D RGE_06230 modC; molybdenum ABC transporter,ATPase subunit ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RGE_25320 tauA; taurine ABC transporter substrate binding protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RGE_25340 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D RGE_25330 tauB; taurine ABC transporter ATP binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RGE_25360 ssuA; putative aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_25390 ssuA; putative aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_01190 putative ABC transporter substrate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGE_25410 ssuC; aliphatic sulfonate ABC transporter, permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D RGE_01170 putative ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein
D RGE_25420 ssuB; aliphatic sulfonate import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGE_01180 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGE_27010 fbpA; putative iron-uptake ABC transporter, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RGE_31490 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RGE_31470 ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D RGE_37600 fbpB; putative ABC transporter permease FbpB K02011 afuB; iron(III) transport system permease protein
D RGE_31480 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RGE_37610 fbpC; putative ABC transporter ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RGE_00320 putative ABC transporter substrate binding protein K11073 potF; putrescine transport system substrate-binding protein
D RGE_26270 potF; putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein
D RGE_26300 potI; putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein
D RGE_26290 potH; putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein
D RGE_26280 potG; putrescine ABC transporter ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RGE_43610 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGE_34960 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGE_43590 putative ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGE_34980 ABC transporter permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGE_43600 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGE_34970 putative ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGE_43620 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGE_34950 potA; ABC transporter ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGE_39820 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RGE_31410 putative ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RGE_39800 ABC transporter membrane spanning protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RGE_31400 putative ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RGE_39810 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RGE_02630 malE; maltose ABC transporter, maltose-binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RGE_02620 malF; maltose ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D RGE_02610 malG; maltose ABC transporter, permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D RGE_37900 sugar ABC transporter ATP binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGE_02640 malK; maltose ABC transporter, ATPase subunit MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGE_15890 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGE_15920 putative ABC transporter substrate binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RGE_15910 putative ABC transporter permease protein K17316 gtsB; glucose/mannose transport system permease protein
D RGE_15900 putative ABC transporter permease protein K17317 gtsC; glucose/mannose transport system permease protein
D RGE_37870 sugar ABC transporter substrate binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RGE_37880 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D RGE_37890 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D RGE_42930 sugar-binding protein, putative K10439 rbsB; ribose transport system substrate-binding protein
D RGE_17720 rbsB; ribose ABC transporter substrate binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D RGE_17700 rbsC; ribose ABC transporter permease protein RbsC K10440 rbsC; ribose transport system permease protein
D RGE_17710 rbsA; ribose ABC transporter ATP binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RGE_10630 ugpB; sn-glycerol-3-phosphate ABC transporter substrate binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RGE_10620 ugpA; sn-glycerol-3-phosphate ABC transporter permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RGE_10610 ugpE; sn-glycerol-3-phosphate ABC transporter permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RGE_10600 ugpC; sn-glycerol-3-phosphate ABC transporter ATP binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RGE_22770 putative ABC transporter substrate binding protein K10227 smoE; polyol transport system substrate-binding protein
D RGE_45490 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RGE_45530 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RGE_45830 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RGE_40020 putative lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RGE_45550 putative ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RGE_40000 putative ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RGE_45790 putative ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RGE_45780 putative ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RGE_40010 putative ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RGE_45560 putative ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RGE_45800 putative ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGE_39990 putative ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGE_45540 putative ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGE_08320 putative signal peptide protein, toluene tolerance Ttg2C-like K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RGE_28500 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RGE_08310 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RGE_28480 putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RGE_08300 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RGE_28490 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RGE_08340 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RGE_08350 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RGE_33190 pstS; phosphate ABC transporter substrate binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RGE_33180 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D RGE_33170 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RGE_33160 pstB; phosphate ABC transporter ATP binding protein, PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RGE_03930 ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RGE_03950 ABC transporter permease protein K02042 phnE; phosphonate transport system permease protein
D RGE_03960 ABC transporter permease protein K02042 phnE; phosphonate transport system permease protein
D RGE_03940 ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGE_09310 gltI; glutamate/aspartate transport system substrate-binding protein GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGE_00370 bacterial extracellular solute-binding protein, family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGE_09330 gltK; glutamate/aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D RGE_09320 gltJ; glutamate/aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D RGE_09340 gltL; glutamate/aspartate ABC type transport system ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RGE_03000 putative substrate-binding periplasmic (pbp) ABC transporter protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_07710 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_15500 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_28940 putative high-affinity branched-chain amino acid ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_29120 livK; putative high-affinity branched-chain amino acid ABC transporter substrate binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGE_02990 putative ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGE_07730 putative ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGE_24320 putative ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGE_34090 livH; putative high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGE_07720 putative branched-chain amino acid transport system permease K01998 livM; branched-chain amino acid transport system permease protein
D RGE_24330 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGE_02980 putative ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D RGE_34080 livM; putative high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGE_03020 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_07740 livG; ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_24340 livG; ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_34070 livG; putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGE_07700 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_24350 livF; ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_03010 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_34060 livF; putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGE_20910 putative outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D RGE_29260 putative ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RGE_30860 metQ; D-methionine ABC transporter substrate binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D RGE_20900 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D RGE_30880 metI; D-methionine ABC transporter permease MetI K02072 metI; D-methionine transport system permease protein
D RGE_20890 putative ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RGE_30870 metN; D-methionine ABC transporter ATP binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D RGE_39470 urtA; ABC transporter substrate-binding protein UrtA K11959 urtA; urea transport system substrate-binding protein
D RGE_39480 urtB; putative ABC transporter permease UrtB K11960 urtB; urea transport system permease protein
D RGE_39490 urtC; ABC transporter permease UrtC K11961 urtC; urea transport system permease protein
D RGE_39500 urtD; ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RGE_39510 urtE; ABC transporter ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RGE_25470 bacterial extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RGE_13060 amino acid ABC transporter substrate binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RGE_14910 putative ABC transporter substrate binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RGE_25490 putative ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RGE_25480 putative ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RGE_13070 putative ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RGE_13080 putative ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RGE_14900 putative ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RGE_25500 ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RGE_11000 dppA; dipeptide ABC transporter substrate binding protein DppA K12368 dppA; dipeptide transport system substrate-binding protein
D RGE_11010 dppB; dipeptide ABC transporter permease protein DppB K12369 dppB; dipeptide transport system permease protein
D RGE_11020 dppC; dipeptide ABC transporter permease protein DppC K12370 dppC; dipeptide transport system permease protein
D RGE_11030 dppD; dipeptide ABC transporter ATP binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D RGE_11040 dppF; dipeptide ABC transporter ATP binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D RGE_01830 putative ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGE_36860 putative ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGE_46800 putative ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGE_08090 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGE_01770 putative ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGE_32100 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGE_46810 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGE_08100 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGE_01780 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGE_32090 putative ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGE_46820 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGE_08110 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGE_32080 putative ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGE_46830 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGE_01810 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGE_08120 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RGE_15050 putative ABC transporter substrate binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D RGE_28910 putative ABC transporter substrate binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D RGE_44580 putative ABC transporter substrate binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D RGE_15060 ABC transporter permease protein K25027 btuC; cobalamin transport system permease protein
D RGE_44590 ABC transporter permease protein K25027 btuC; cobalamin transport system permease protein
D RGE_15070 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D RGE_44600 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D RGE_05840 znuA; metal ABC transporter substrate binding protein ZnuA K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D RGE_05850 znuB; metal ABC transporter permease protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D RGE_05860 znuC; metal ABC transporter ATP-binding protein ZnuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D RGE_04350 rfbA; O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein
D RGE_04340 rfbB; O-antigen export system ATP-binding protein RfbB K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RGE_29150 putative ABC transporter permease K07091 lptF; lipopolysaccharide export system permease protein
D RGE_29160 putative ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D RGE_46040 putative ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RGE_00510 natB; sodium ABC transporter permease protein NatB K09696 natB; sodium transport system permease protein
D RGE_00500 natA; sodium ABC transporter ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RGE_19170 nosY; copper ABC transporter, permease protein, NosY K19341 nosY; Cu-processing system permease protein
D RGE_19180 nosF; copper ABC transporter, ATP-binding protein NosF K19340 nosF; Cu-processing system ATP-binding protein
D RGE_21570 lolC; lipoprotein ABC transporter permease LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D RGE_21560 lolD; lipoprotein ABC transporter ATP binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RGE_22090 ccmD; cytochrome c-type biogenesis protein CcmD K02196 ccmD; heme exporter protein D
D RGE_22080 ccmC; cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D RGE_22070 ccmB; cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D RGE_22040 ccmA; cytochrome c-type biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RGE_18390 putative ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGE_08540 putative ABC transporter permease/ATP-binding protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGE_19310 putative ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGE_39200 putative ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGE_24190 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGE_08530 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGE_19300 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGE_39190 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGE_24200 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGE_07820 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGE_03630 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGE_39430 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGE_39600 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGE_43840 putative macrolide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGE_14550 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGE_46880 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGE_46890 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGE_07810 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGE_03640 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGE_24160 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGE_43830 putative macrolide ABC transporter ATP binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGE_14560 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGE_46870 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGE_35160 norM; multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D RGE_01250 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D RGE_01490 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D RGE_15850 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D RGE_01700 major facilitator superfamily MFS_1 K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D RGE_25560 major facilitator superfamily MFS_1 K23677 SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter
D RGE_33510 lhaA; light-harvesting 1 (B870) complex assembly protein LhaA K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RGE_28740 pucC; PucC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RGE_33400 PucC family protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RGE_46760 ampG; putative transporter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RGE_29760 tetA; tetracycline resistance protein, class A TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RGE_30960 tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RGE_01460 major facilitator superfamily MFS_1 K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RGE_09420 bcr; bicyclomycin resistance protein Bcr K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RGE_14580 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RGE_22190 araJ; major facilitator superfamily MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RGE_31360 multidrug resistance protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RGE_40820 emrB; multidrug resistance protein B EmrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RGE_39550 yfmO; major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D RGE_32400 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RGE_05270 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D RGE_44010 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RGE_44020 ptsH; sugar transport PTS system phosphocarrier protein HPr, PtsH K02784 ptsH; phosphocarrier protein HPr
D RGE_16110 fruB; phosphoenolpyruvate--protein phosphotransferase FruB K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D RGE_16130 fruA; PTS system, fructose-specific IIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RGE_44030 phosphotransferase system, fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGE_45090 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RGE_29560 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RGE_02500 amtB; ammonium transporter AmtB K03320 amt; ammonium transporter, Amt family
D RGE_16060 glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGE_12120 glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGE_45430 glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGE_04890 glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGE_10510 sspA; stringent starvation protein A SspA K03599 sspA; stringent starvation protein A
D RGE_21610 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D RGE_33310 hypothetical protein K19416 yccA; modulator of FtsH protease
D RGE_05310 focA; formate transporter FocA K06212 focA; formate transporter
D RGE_17530 focA; formate/nitrite transporter FocA K06212 focA; formate transporter
D RGE_10470 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D RGE_22300 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D RGE_20550 ureI; putative urea channel UreI K22112 amiS; putative amide transporter protein
D RGE_19730 lafT; chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RGE_17060 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D RGE_19740 lafU; chemotaxis protein LafU K02557 motB; chemotaxis protein MotB
D RGE_17070 motB; outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RGE_31980 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D RGE_34380 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D RGE_45140 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D RGE_31990 exbD; biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D RGE_34390 exbD; biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D RGE_34400 exbD; biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D RGE_39110 tolQ; biopolymer transport protein, TolQ K03562 tolQ; biopolymer transport protein TolQ
D RGE_45150 exbD; biopolymer transport protein ExbD K03560 tolR; biopolymer transport protein TolR
D RGE_39120 tolR; biopolymer transport protein TolR K03560 tolR; biopolymer transport protein TolR
D RGE_40800 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D RGE_44990 corA; magnesium/nickel/cobalt transporter CorA K03284 corA; magnesium transporter
D RGE_44160 Mg2+ transporter protein, CorA family protein K03284 corA; magnesium transporter
D RGE_14330 crcB; protein CrcB homolog K06199 crcB; fluoride exporter
D RGE_35300 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D RGE_18230 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGE_02570 lamB; maltoporin LamB K02024 lamB; maltoporin
D RGE_25870 OmpA/MotB family outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGE_13930 OmpA/MotB family outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGE_32210 OmpA/MotB family outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGE_18690 OmpA/MotB family outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGE_33020 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGE_11770 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGE_25290 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D RGE_04710 esterase, SGNH hydrolase-type domain protein K12686 apeE; outer membrane lipase/esterase
D RGE_38170 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D RGE_43890 putative TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D RGE_44570 putative TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D RGE_15030 putative TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D RGE_30450 fpvA; ferripyoverdine receptor FpvA K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D RGE_39710 putative TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D RGE_30510 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D RGE_06050 hmuR; TonB-dependent heme/hemoglobin receptor family protein HmuR K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D RGE_25230 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_30540 fhuA; ferrichrome-iron receptor FhuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_30670 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_30480 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_29360 nosA; TonB-dependent copper receptor NosA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_22570 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_05920 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_05960 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_20850 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_11630 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_12020 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_19250 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_23390 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_25550 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_26820 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_39230 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_45480 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_06950 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_20430 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGE_29580 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D RGE_35070 tolC; type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RGE_00130 outer membrane efflux protein K18903 oprC; outer membrane protein, multidrug efflux system
D RGE_18890 outer membrane efflux protein K18300 oprN; outer membrane protein, multidrug efflux system
D RGE_09010 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_32230 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_16470 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_31200 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_18420 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_29510 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_43810 outer membrane efflux protein K18904 nodT; outer membrane protein, multidrug efflux system
D RGE_04080 putative polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D RGE_10700 putative polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D RGE_27310 yaeT; outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family
D RGE_27530 hypothetical protein K17713 bamB; outer membrane protein assembly factor BamB
D RGE_34820 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC
D RGE_27640 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D RGE_45120 SmpA/OmlA domain-containing protein K06186 bamE; outer membrane protein assembly factor BamE
D RGE_36940 surface antigen (D15) K07278 tamA; translocation and assembly module TamA
D RGE_22290 hypothetical protein K07278 tamA; translocation and assembly module TamA
D RGE_22280 hypothetical protein K09800 tamB; translocation and assembly module TamB
D RGE_36960 hypothetical protein K09800 tamB; translocation and assembly module TamB
D RGE_46030 lptA; putative lipopolysaccharide transport protein A LptA K09774 lptA; lipopolysaccharide export system protein LptA
D RGE_46960 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D RGE_45310 ostA; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D RGE_45170 lptE; putative LPS-assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D RGE_43690 corC; magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D RGE_05820 cidA; holin-like protein CidA K06518 cidA; holin-like protein
D RGE_45400 ethanolamine permease K16238 eat; ethanolamine permease
D RGE_14120 zupT; putative zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D RGE_28800 putative metal ion transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RGE_00140 AcrB/AcrD/AcrF family protein K18902 bpeF; multidrug efflux pump
D RGE_27960 transporter, AcrB/D/F family protein K18303 mexK; multidrug efflux pump
D RGE_16460 mexB; multidrug resistance protein MexB K18138 acrB; multidrug efflux pump
D RGE_32710 transporter, AcrB/D/F family protein K18138 acrB; multidrug efflux pump
D RGE_32240 inner membrane efflux protein K18138 acrB; multidrug efflux pump
D RGE_29520 inner membrane efflux protein K18146 adeB; multidrug efflux pump
D RGE_11500 small multidrug resistance protein, SMR family K03297 emrE; small multidrug resistance pump
D RGE_02860 putative amino-acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter
D RGE_10300 putative transmembrane protein K03298 TC.DME; drug/metabolite transporter, DME family
D RGE_13010 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D RGE_14680 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D RGE_05480 kdgT; 2-keto-3-deoxygluconate transporter KdgT K02526 kdgT; 2-keto-3-deoxygluconate permease
D RGE_35560 lldP; L-lactate permease LldP K00427 lldP; L-lactate permease
D RGE_34340 choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter
D RGE_46280 C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein
D RGE_27210 putative sodium symporter protein K14393 actP; cation/acetate symporter
D RGE_43350 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D RGE_22420 dctA; C4-dicarboxylate transport protein DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D RGE_29660 sodium/hydrogen exchanger family protein K24163 nhaK; monovalent cation/hydrogen antiporter
D RGE_46990 sodium/hydrogen exchanger family protein K03455 KEA1_2_3; K+:H+ antiporter
D RGE_32270 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D RGE_43470 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D RGE_43480 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RGE_01230 xanthine/uracil permease family protein K09016 rutG; putative pyrimidine permease RutG
D RGE_07080 sdaC; serine transporter SdaC K03837 sdaC; serine transporter
D RGE_30780 benE; putative benzoate membrane transport protein K05782 benE; benzoate membrane transport protein
D RGE_02470 putative benzoate membrane transport protein K05782 benE; benzoate membrane transport protein
D RGE_22400 chrA; putative chromate transport protein K07240 chrA; chromate transporter
D RGE_29490 putative chromate transport protein K07240 chrA; chromate transporter
D RGE_29500 putative chromate transport protein K07240 chrA; chromate transporter
D RGE_42600 putative chromate transport protein K07240 chrA; chromate transporter
D RGE_29290 high-affinity nickel-transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D RGE_37800 putative transporter K03321 TC.SULP; sulfate permease, SulP family
D RGE_36750 bicA; bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family
D RGE_15790 dctM; TRAP-T family transporter large inner membrane subunit DctM K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGE_32480 dctM; TRAP dicarboxylate transporter, DctM subunit K21393 yiaN; TRAP-type transport system large permease protein
D RGE_32490 dctQ; tripartite ATP-independent periplasmic transporter, DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D RGE_32470 dctP; TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D RGE_15780 dctP; TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D RGE_20770 arsB; arsenite resistance protein ArsB K03325 ACR3; arsenite transporter
D RGE_37270 phaAB; putative K(+)/H(+) antiporter subunit A/B PhaAB K05559 phaA; multicomponent K+:H+ antiporter subunit A
D RGE_37280 phaC; putative K+/H+ antiporter subunit C PhaC K05560 phaC; multicomponent K+:H+ antiporter subunit C
D RGE_37290 phaD; putative K+/H+ antiporter subunit D PhaD K05561 phaD; multicomponent K+:H+ antiporter subunit D
D RGE_37300 phaE; putative K+/H+ antiporter subunit E PhaE K05562 phaE; multicomponent K+:H+ antiporter subunit E
D RGE_37310 phaF; putative K+/H+ antiporter subunit F PhaF K05563 phaF; multicomponent K+:H+ antiporter subunit F
D RGE_37320 phaG; putative K+/H+ antiporter subunit G PhaG K05564 phaG; multicomponent K+:H+ antiporter subunit G
D RGE_13360 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RGE_02100 putative transporter, AEC family protein K13936 mdcF; malonate transporter and related proteins
D RGE_14820 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D RGE_02480 kup; putative potassium transport system protein Kup K03549 kup; KUP system potassium uptake protein
D RGE_07480 lysine exporter protein LysE/YggA family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D RGE_17460 homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D RGE_04600 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D RGE_04610 AzlD family protein K26606 azlD; branched chain amino acid efflux pump
D RGE_21710 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D RGE_21700 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D RGE_35720 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D RGE_12040 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D RGE_46930 membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D RGE_09530 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RGE_09210 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RGE_22240 iron permease, FTR1 family K07243 FTR; high-affinity iron transporter
D RGE_22270 hypothetical protein K07230 p19; periplasmic iron binding protein
D RGE_04740 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D RGE_34370 TonB family protein K03832 tonB; periplasmic protein TonB
D RGE_42200 TonB family protein K03832 tonB; periplasmic protein TonB
D RGE_43880 TonB family protein K03832 tonB; periplasmic protein TonB
D RGE_44980 hypothetical protein K03832 tonB; periplasmic protein TonB
D RGE_11120 pal; putative peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D RGE_39130 TolA-related transport transmembrane protein K03646 tolA; colicin import membrane protein
D RGE_11110 tolB; protein TolB K03641 tolB; TolB protein
D RGE_28180 hppA; pyrophosphate-energized proton pump HppA K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RGE_11560 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGE_11570 sodium ion-translocating decarboxylase, biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGE_20320 dmsA; dimethylsulfoxide (DMSO) reductase, A subunit DmsA K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D RGE_20310 dmsB; dimethylsulfoxide (DMSO) reductase, B subunit DmsB K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D RGE_20300 dmsC; dimethylsulfoxide (DMSO) reductase, C subunit DmsC K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D RGE_31370 vceA; secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D RGE_40830 emrA; putative multidrug resistance protein A EmrA K03543 emrA; membrane fusion protein, multidrug efflux system
D RGE_29600 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D RGE_00150 secretion protein HlyD family protein K18901 bpeE; membrane fusion protein, multidrug efflux system
D RGE_27970 secretion protein HlyD family protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D RGE_09030 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32250 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_16450 mexA; multidrug resistance protein MexA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32720 multidrug efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_21840 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_15870 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_38190 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_29530 secretion protein HlyD family protein K18145 adeA; membrane fusion protein, multidrug efflux system
D RGE_27840 macA; macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D RGE_10720 putative tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGE_04100 protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGE_04090 polysaccharide chain length determinant protein, PEP-CTERM locus subfamily K25590 epsF; protein tyrosine kinase modulator
D RGE_10710 lipopolysaccharide biosynthesis protein K25590 epsF; protein tyrosine kinase modulator
D RGE_14970 hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter
D RGE_40790 putative ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D RGE_40780 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RGE_12470 ecnAB; entericidin EcnAB K16348 ecnB; entericidin B
D RGE_22110 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D RGE_12000 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D RGE_39870 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RGE_14030 hypothetical protein K07274 mipA; MipA family protein
D RGE_38570 hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:rge02044]
D RGE_35070 tolC; type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RGE_10120 exeA; general secretion pathway protein A ExeA K02450 gspA; general secretion pathway protein A
D RGE_08390 putative general secretion pathway protein A K02450 gspA; general secretion pathway protein A
D RGE_04120 putative nucleoside-triphosphatase K02450 gspA; general secretion pathway protein A
D RGE_08380 putative general secretion pathway protein B K02451 gspB; general secretion pathway protein B
D RGE_08040 gspC; putative general secretion pathway protein C GspC K02452 gspC; general secretion pathway protein C
D RGE_07950 gspD; putative general secretion pathway protein D GspD K02453 gspD; general secretion pathway protein D
D RGE_07940 gspE; putative general secretion pathway protein E GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGE_21690 putative secretion pathway ATPase K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGE_07930 gspF; putative general secretion pathway protein F GspF K02455 gspF; general secretion pathway protein F
D RGE_08030 gspG; putative general secretion pathway protein G GspG K02456 gspG; general secretion pathway protein G
D RGE_08020 gspH; putative general secretion pathway protein H GspH K02457 gspH; general secretion pathway protein H
D RGE_08010 gspI; putative general secretion pathway protein I GspI K02458 gspI; general secretion pathway protein I
D RGE_08000 gspJ; putative general secretion pathway protein J GspJ K02459 gspJ; general secretion pathway protein J
D RGE_07990 gspK; putative general secretion pathway protein K GspK K02460 gspK; general secretion pathway protein K
D RGE_07980 gspL; putative general secretion pathway protein L GspL K02461 gspL; general secretion pathway protein L
D RGE_07970 gspM; putative general secretion pathway protein M GspM K02462 gspM; general secretion pathway protein M
D RGE_07960 gspN; putative general secretion pathway protein N GspN K02463 gspN; general secretion pathway protein N
D RGE_42630 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGE_46470 pilE; fimbrial protein, type IV pilin, PilE K02650 pilA; type IV pilus assembly protein PilA
D RGE_42610 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D RGE_42620 pilC; type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D RGE_16870 pilE; fimbrial protein, type IV pilin, PilE K02655 pilE; type IV pilus assembly protein PilE
D RGE_38990 fimbrial protein, type IV pilin, putative PilE K02655 pilE; type IV pilus assembly protein PilE
D RGE_44250 pilE; fimbrial protein, type IV pilin, PilE K02655 pilE; type IV pilus assembly protein PilE
D RGE_37750 putative fimbrial protein PilE K02655 pilE; type IV pilus assembly protein PilE
D RGE_27580 pilF; type IV pilus biogenesis/stability protein PilF K02656 pilF; type IV pilus assembly protein PilF
D RGE_42110 pilG; twitching motility, CheY-like protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RGE_42100 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D RGE_42090 pilI; twitching motility signal transduction protein PilI K02659 pilI; twitching motility protein PilI
D RGE_42080 pilJ; twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D RGE_08170 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RGE_08200 pilO; type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D RGE_08210 pilP; type IV pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D RGE_08220 pilQ; type IV pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D RGE_00790 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RGE_24040 twitching motility protein PilU PilT like K02670 pilU; twitching motility protein PilU
D RGE_00770 pilU; twitching motility protein PilU K02670 pilU; twitching motility protein PilU
D RGE_44270 pilV; putative type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D RGE_39010 pilW; putative fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D RGE_44280 pilW; putative fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D RGE_44300 pilY1; Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D RGE_26070 pilZ; putative type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D RGE_16860 type IV pilus transmembrane FimT-like protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RGE_38980 type IV pilus transmembrane FimT-like protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RGE_39000 type IV pilus transmembrane FimT-like protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RGE_44260 type IV pilus transmembrane FimT-like protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RGE_12510 LysM domain protein K08086 fimV; pilus assembly protein FimV
D RGE_13710 hypothetical protein K02237 comEA; competence protein ComEA
D RGE_34690 comA; putative competence protein ComA K02238 comEC; competence protein ComEC
D RGE_19540 lfhA; lateral flagellar export/assembly protein LfhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGE_17110 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGE_19550 lfhB; lateral flagellar export/assembly protein LfhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGE_17100 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGE_19620 lfiF; lateral flagellar M-ring protein LfiF K02409 fliF; flagellar M-ring protein FliF
D RGE_16830 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGE_19640 lfiH; lateral flagellar export/assembly protein LfiH K02411 fliH; flagellar assembly protein FliH
D RGE_16810 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RGE_19650 lfiI; flagellum-specific ATP synthase LfiI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGE_16800 fliI; flagellar biosynthesis ATPase FilI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGE_19590 putative lateral flagellar FliN-like motor switch protein K02417 fliN; flagellar motor switch protein FliN
D RGE_16750 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RGE_16740 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RGE_19580 lfiP; lateral flagellar export/assembly protein LfiP K02419 fliP; flagellar biosynthesis protein FliP
D RGE_16730 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGE_19570 lfiQ; lateral flagellar export/assembly protein LfiQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGE_16720 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGE_19560 lfiR; flagellar biosynthetic protein LfiR K02421 fliR; flagellar biosynthesis protein FliR
D RGE_16710 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGE_41660 dsbC; putative thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RGE_20660 putative oxidoreductase K20266 trbJ; type IV secretion system protein TrbJ
D RGE_04710 esterase, SGNH hydrolase-type domain protein K12686 apeE; outer membrane lipase/esterase
D RGE_25890 icmF; type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D RGE_32190 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D RGE_30300 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D RGE_25800 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D RGE_30310 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D RGE_25790 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D RGE_30390 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D RGE_25710 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D RGE_30380 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D RGE_25720 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D RGE_30370 hypothetical protein K11897 impF; type VI secretion system protein ImpF
D RGE_25730 hypothetical protein K11897 impF; type VI secretion system protein ImpF
D RGE_30350 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D RGE_25750 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D RGE_30340 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D RGE_25760 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D RGE_25860 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D RGE_32220 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D RGE_30360 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D RGE_25740 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D RGE_30290 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_25810 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_25680 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_25940 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_30400 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_32150 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGE_30320 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D RGE_25780 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D RGE_25700 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D RGE_25880 hypothetical protein K11890 impM; type VI secretion system protein ImpM
D RGE_32200 hypothetical protein K11890 impM; type VI secretion system protein ImpM
D RGE_10540 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGE_41920 secB; preprotein translocase SecB subunit K03071 secB; preprotein translocase subunit SecB
D RGE_04500 secD; preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D RGE_03140 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D RGE_04510 secF; preprotein translocase SecF subunit K03074 secF; preprotein translocase subunit SecF
D RGE_15560 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RGE_03500 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D RGE_42380 ffh; signal recognition particle subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGE_42390 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RGE_04490 yajC; preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RGE_47030 yidC; protein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGE_10400 tatA; sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGE_10410 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGE_10420 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rge02042]
D RGE_40100 thiol-activated cytolysin family protein K11031 slo; thiol-activated cytolysin
D RGE_18230 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGE_01200 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
D RGE_22010 plc; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:rge02022]
D RGE_33130 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGE_33140 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RGE_45010 response regulator receiver protein CheY-like K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RGE_18310 sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGE_26890 ompB; osmolarity sensor protein OmpB K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGE_18300 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RGE_26880 ompR; DNA-binding response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RGE_05420 creC; sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D RGE_05430 creB; DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D RGE_09040 baeS; putative signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D RGE_09050 baeR; DNA-binding transcriptional regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D RGE_30140 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGE_09270 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGE_09260 qseB; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D RGE_30130 qseB; two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D RGE_20680 kdpD; two-component system, sensor kinase protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGE_20670 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGE_29550 sensor protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RGE_29540 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RGE_07370 sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RGE_18450 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RGE_27080 response regulator receiver protein CheY-like K02483 K02483; two-component system, OmpR family, response regulator
D RGE_16520 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RGE_31800 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RGE_46610 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RGE_07380 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RGE_17290 two-component response regulatory protein K02483 K02483; two-component system, OmpR family, response regulator
D RGE_40500 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_40700 sensor protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_23360 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGE_40490 gacA; two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGE_23350 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGE_10170 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGE_39320 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGE_20130 putative periplasmic sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D RGE_19330 integral membrane sensor signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RGE_19340 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR
D RGE_23190 citA; sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RGE_23200 citB; transcriptional regulator CitB K07702 dpiA; two-component system, CitB family, response regulator CitB
D RGE_36500 algZ; two-component system sensor protein, alginate biosynthesis K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RGE_36490 algR; two component transcriptional regulator, LytTR family K08083 algR; two-component system, LytTR family, response regulator AlgR
D RGE_17570 lytS; two-component system, LytT family, sensor histidine kinase LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RGE_07120 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D RGE_17560 lytT; two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D RGE_14390 ntrB; signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGE_14400 ntrC; nitrogen metabolism transcriptional regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RGE_44620 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGE_44610 two component transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RGE_09900 atoS; signal transduction histidine-protein kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D RGE_09890 atoC; acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D RGE_42350 pilS; two-component system sensor kinase PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RGE_42340 pilR; two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D RGE_36080 PAS/PAC sensor hybrid histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RGE_35940 hupR; hydrogenase transcriptional regulator HupR K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D RGE_04050 two component, sigma54 specific, transcriptional regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator
D RGE_39360 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_37450 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_07060 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_17080 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_05050 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_39350 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_37470 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_35440 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGE_37400 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGE_36420 methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGE_46370 methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGE_42070 pilL; PilL protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RGE_42110 pilG; twitching motility, CheY-like protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RGE_42100 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D RGE_45240 PAS/PAC sensor hybrid histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RGE_45230 two component transcriptional regulator, LuxR family K11712 dctR; two-component system, LuxR family, response regulator DctR
D RGE_28830 histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D RGE_28820 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D RGE_07350 sensor protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D RGE_22740 PAS/PAC sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_14770 sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_36800 integral membrane sensor signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGE_17410 Hpt domain protein K20976 hptB; histidine phosphotransfer protein HptB
D RGE_17390 response regulator receiver protein CheY-like K22010 pdtaR; two-component system, response regulator PdtaR
D RGE_14010 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_23260 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_24820 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_05780 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_08830 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_22590 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_22850 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_01590 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D RGE_42940 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:rge02035]
D RGE_39360 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_37450 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGE_07030 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_39400 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_34110 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_37430 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGE_35430 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RGE_35420 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGE_37410 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGE_35440 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGE_37400 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGE_36420 methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGE_46370 methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGE_07060 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_17080 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_05050 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_39350 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_37470 response regulator receiver protein CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGE_17090 cheZ; chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D RGE_06770 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07900 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_22810 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_17620 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_09090 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39370 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39410 mcp; methyl-accepting chemotaxis sensory transducer, putative K03406 mcp; methyl-accepting chemotaxis protein
D RGE_22990 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07020 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_10090 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_17150 putative chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_20330 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_32450 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_36600 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_36610 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_37440 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_37480 bacterial chemotaxis sensory transducer domain protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_42580 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_44460 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RGE_44470 mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RGE_39380 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_03870 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_07040 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGE_11460 mcp; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D RGE_34430 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D RGE_00890 aer; putative aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D RGE_46160 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RGE_37510 mcp; putative methyl-accepting chemotaxis protein with PAS/Pac sensor K03776 aer; aerotaxis receptor
D RGE_19640 lfiH; lateral flagellar export/assembly protein LfiH K02411 fliH; flagellar assembly protein FliH
D RGE_16810 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RGE_19650 lfiI; flagellum-specific ATP synthase LfiI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGE_16800 fliI; flagellar biosynthesis ATPase FilI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGE_16790 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RGE_16740 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RGE_19580 lfiP; lateral flagellar export/assembly protein LfiP K02419 fliP; flagellar biosynthesis protein FliP
D RGE_16730 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGE_19570 lfiQ; lateral flagellar export/assembly protein LfiQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGE_16720 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGE_19560 lfiR; flagellar biosynthetic protein LfiR K02421 fliR; flagellar biosynthesis protein FliR
D RGE_16710 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGE_19540 lfhA; lateral flagellar export/assembly protein LfhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGE_17110 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGE_19550 lfhB; lateral flagellar export/assembly protein LfhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGE_17100 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGE_19630 lfiG; putative lateral flagellar LfiG-like motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RGE_16820 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RGE_16760 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RGE_19600 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D RGE_19590 putative lateral flagellar FliN-like motor switch protein K02417 fliN; flagellar motor switch protein FliN
D RGE_16750 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RGE_19620 lfiF; lateral flagellar M-ring protein LfiF K02409 fliF; flagellar M-ring protein FliF
D RGE_16830 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGE_19860 lfgI; lateral flagellar P-ring protein LfgI K02394 flgI; flagellar P-ring protein FlgI
D RGE_17330 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RGE_19780 lfgA; lateral flagellar P-ring addition protein LfgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RGE_17190 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RGE_19850 lfgH; lateral flagellar L-ring protein LfgH K02393 flgH; flagellar L-ring protein FlgH
D RGE_17320 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RGE_22960 flgH; putative flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RGE_19710 lafF; flagellar basal body-associated protein LafF K02415 fliL; flagellar protein FliL
D RGE_16770 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D RGE_19610 lfiE; flagellar hook-basal body complex subunit LfiE K02408 fliE; flagellar hook-basal body complex protein FliE
D RGE_16840 fliE; flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RGE_19700 lafE; putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RGE_16780 fliK; putative flagellar hook-length control protein FilK K02414 fliK; flagellar hook-length control protein FliK
D RGE_19790 lfgB; lateral flagellar rod protein LfgB K02387 flgB; flagellar basal-body rod protein FlgB
D RGE_17200 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RGE_19800 lfgC; lateral flagellar basal-body rod protein LfgC K02388 flgC; flagellar basal-body rod protein FlgC
D RGE_17210 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RGE_19810 lfgD; putative basal-body rod modification protein LfgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RGE_17220 flgD; flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RGE_19830 lfgF; lateral flagellar rod protein LfgF K02391 flgF; flagellar basal-body rod protein FlgF
D RGE_17240 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RGE_19840 lfgG; lateral flagellar rod protein LfgG K02392 flgG; flagellar basal-body rod protein FlgG
D RGE_17310 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RGE_19770 peptidoglycan hydrolase, flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RGE_19870 lfgJ; putative LfgJ protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RGE_17340 flgJ; peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D RGE_19820 lfgE; flagellar hook protein LfgE K02390 flgE; flagellar hook protein FlgE
D RGE_17230 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RGE_19880 lfgK; lateral flagellar hook associated protein 1 LfgK K02396 flgK; flagellar hook-associated protein 1
D RGE_17350 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RGE_19890 lfgL; lateral flagellar hook-associated protein 3 LfgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RGE_17360 flgL; flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RGE_19760 lfgN; flagellar protein LfgN K02399 flgN; flagellar biosynthesis protein FlgN
D RGE_16920 fliC; flagellin FliC K02406 fliC; flagellin
D RGE_16930 fliC; flagellin FliC K02406 fliC; flagellin
D RGE_16940 fliC; flagellin FriC K02406 fliC; flagellin
D RGE_19460 lafA; lateral flagellin LafA K02406 fliC; flagellin
D RGE_19670 lafB; lateral flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D RGE_16910 fliD; flagellar hook-associated protein 2 FliD K02407 fliD; flagellar hook-associated protein 2
D RGE_19680 lafC; lateral flagellar chaperone protein LafC K02422 fliS; flagellar secretion chaperone FliS
D RGE_16900 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RGE_16890 fliT; putative flagellar protein FliT K02423 fliT; flagellar protein FliT
D RGE_17030 flhD; flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RGE_17040 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGE_19720 lafS; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D RGE_17140 filA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D RGE_45970 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RGE_19730 lafT; chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RGE_17060 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D RGE_19740 lafU; chemotaxis protein LafU K02557 motB; chemotaxis protein MotB
D RGE_17070 motB; outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RGE_19750 lfgM; putative negative regulator of flagellin synthesis LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGE_17180 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGE_17120 flhF; GTP-binding signal recognition particle SRP54 G-domain FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D RGE_35400 fleN; flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D RGE_42110 pilG; twitching motility, CheY-like protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RGE_42100 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D RGE_42090 pilI; twitching motility signal transduction protein PilI K02659 pilI; twitching motility protein PilI
D RGE_42080 pilJ; twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D RGE_42070 pilL; PilL protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RGE_42340 pilR; two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D RGE_42350 pilS; two-component system sensor kinase PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RGE_00790 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RGE_24040 twitching motility protein PilU PilT like K02670 pilU; twitching motility protein PilU
D RGE_00770 pilU; twitching motility protein PilU K02670 pilU; twitching motility protein PilU
D RGE_46470 pilE; fimbrial protein, type IV pilin, PilE K02650 pilA; type IV pilus assembly protein PilA
D RGE_42610 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D RGE_42620 pilC; type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D RGE_42630 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGE_27580 pilF; type IV pilus biogenesis/stability protein PilF K02656 pilF; type IV pilus assembly protein PilF
D RGE_08220 pilQ; type IV pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D RGE_08210 pilP; type IV pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D RGE_08200 pilO; type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D RGE_08170 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RGE_26070 pilZ; putative type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D RGE_44270 pilV; putative type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D RGE_39010 pilW; putative fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D RGE_44280 pilW; putative fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D RGE_44300 pilY1; Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D RGE_16870 pilE; fimbrial protein, type IV pilin, PilE K02655 pilE; type IV pilus assembly protein PilE
D RGE_38990 fimbrial protein, type IV pilin, putative PilE K02655 pilE; type IV pilus assembly protein PilE
D RGE_44250 pilE; fimbrial protein, type IV pilin, PilE K02655 pilE; type IV pilus assembly protein PilE
D RGE_37750 putative fimbrial protein PilE K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rge04812]
D RGE_46670 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RGE_09590 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGE_09580 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RGE_37350 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RGE_37340 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RGE_37330 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RGE_00580 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RGE_38650 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RGE_36820 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RGE_30020 putative ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGE_00620 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rge04147]
D RGE_07530 htpG; heat shock protein 90 HtpG K04079 HSP90A; molecular chaperone HtpG
D RGE_14990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGE_44760 cbbG; glyceraldehyde-3-phosphate dehydrogenase CbbG K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGE_04620 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGE_22610 putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGE_04640 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGE_31660 ppiA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RGE_43190 groEL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGE_27120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGE_08410 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGE_30970 guaB; inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RGE_03130 tuf; elongation factor Tu Tuf K02358 tuf; elongation factor Tu
D RGE_03270 tufA; elongation factor EF-Tu TufA K02358 tuf; elongation factor Tu
D RGE_10390 putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RGE_11300 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_26160 ldh; L-lactate dehydrogenase Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGE_06000 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30260 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_03600 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_07750 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46110 fadD; long-chain-fatty-acid-CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_46900 putative long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_30240 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGE_09950 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_23760 phbA; acetyl-CoA C-acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_01440 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_21080 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_24390 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_43520 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGE_04990 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGE_32030 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D RGE_47000 apt; adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RGE_36510 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGE_11760 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGE_20070 metB; cystathionine gamma-lyase MetB K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RGE_26760 putative fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RGE_18460 cbbF; fructose-1,6-bisphosphatase CbbF K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGE_19040 glgB; putative 1,4-alpha-glucan-branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGE_29090 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGE_01930 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGE_26250 puuA; glutamate--putrescine ligase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_26330 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGE_44150 hemB; porphobilinogen synthase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RGE_06290 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RGE_40210 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RGE_05880 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_39570 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_32770 oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGE_10210 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGE_13540 putative M48A family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RGE_23670 lpdA; dihydrolipoamide dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27720 odhL; 2-oxoglutarate dehydrogenase E3 component OdhL K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGE_27800 etfL; electron transfer flavoprotein alpha-subunit EtfL K03522 fixB; electron transfer flavoprotein alpha subunit
D RGE_43130 fixB; putative electron transfer flavoprotein alpha-subunit FixB K03522 fixB; electron transfer flavoprotein alpha subunit
D RGE_00870 gdhA; glutamate dehydrogenase GdhA K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RGE_08370 zwf; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGE_15550 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGE_41950 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGE_23020 blc; outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
D RGE_25060 putative transporter K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:rge02048]
D RGE_06830 cas1; CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RGE_06820 cas2; CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D RGE_06890 cas3; CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RGE_06880 cse1; CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D RGE_06870 cse2; CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D RGE_06860 cse4; CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D RGE_06850 cas5; CRISPR-associated protein, Cas5e family K19125 casD; CRISPR system Cascade subunit CasD
D RGE_06840 cas3; CRISPR associated protein, Cas3 family K19126 casE; CRISPR system Cascade subunit CasE
D RGE_16330 putative hydrolase K01156 res; type III restriction enzyme [EC:3.1.21.5]
D RGE_16310 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RGE_19500 HNH endonuclease family protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D RGE_29940 restriction endonuclease K07448 mrr; restriction system protein
D RGE_00110 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RGE_05070 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RGE_00100 transcriptional regulator, Xre family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RGE_37080 hypothetical protein K18843 hicB; antitoxin HicB
D RGE_27730 PspC domain protein K03973 pspC; phage shock protein C
D RGE_43770 putative CcdB-like protein K19163 ccdB; toxin CcdB
D RGE_39530 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D RGE_39520 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D RGE_29990 transcriptional regulator, Xre family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D RGE_35790 transcriptional regulator, Xre family K21498 higA-1; antitoxin HigA-1
D RGE_07230 hypothetical protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D RGE_05470 hypothetical protein K19334 tabA; biofilm protein TabA
D RGE_09590 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGE_46670 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RGE_34730 parC; topoisomerase IV subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGE_34760 parE; topoisomerase IV subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGE_12620 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGE_12300 hypothetical protein K09159 cptB; antitoxin CptB
D RGE_15420 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_42750 nifS; nitrogenase metalloclusters biosynthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGE_43040 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:rge04052]
D RGE_08490 acyl-CoA-binding domain-containing protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rge04090]
C 01504 Antimicrobial resistance genes [BR:rge01504]
D RGE_06410 putative aminoglycoside 6'-N-acetyltransferase/phosphoglycolate phosphatase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D RGE_29760 tetA; tetracycline resistance protein, class A TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RGE_30960 tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RGE_19960 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RGE_09030 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32250 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_16450 mexA; multidrug resistance protein MexA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_32720 multidrug efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_21840 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_15870 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_38190 secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGE_16460 mexB; multidrug resistance protein MexB K18138 acrB; multidrug efflux pump
D RGE_32710 transporter, AcrB/D/F family protein K18138 acrB; multidrug efflux pump
D RGE_32240 inner membrane efflux protein K18138 acrB; multidrug efflux pump
D RGE_09010 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_32230 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_16470 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_31200 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_18420 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_29510 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D RGE_18890 outer membrane efflux protein K18300 oprN; outer membrane protein, multidrug efflux system
D RGE_12630 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D RGE_27970 secretion protein HlyD family protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D RGE_27960 transporter, AcrB/D/F family protein K18303 mexK; multidrug efflux pump
D RGE_36210 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RGE_29550 sensor protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RGE_29540 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RGE_29530 secretion protein HlyD family protein K18145 adeA; membrane fusion protein, multidrug efflux system
D RGE_29520 inner membrane efflux protein K18146 adeB; multidrug efflux pump
D RGE_35070 tolC; type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RGE_26610 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D RGE_00150 secretion protein HlyD family protein K18901 bpeE; membrane fusion protein, multidrug efflux system
D RGE_00140 AcrB/AcrD/AcrF family protein K18902 bpeF; multidrug efflux pump
D RGE_00130 outer membrane efflux protein K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rge00537]
D RGE_05880 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RGE_39570 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rge03100]
D RGE_t0130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0470 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0410 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0350 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGE_t0310 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGE_t0430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGE_t0440 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGE_t0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGE_t0220 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGE_t0380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGE_t0270 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RGE_t0070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGE_t0140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGE_t0150 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGE_t0280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGE_t0360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGE_t0030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGE_t0490 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGE_t0180 tRNA-His K14226 tRNA-His; tRNA His
D RGE_t0400 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGE_t0480 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGE_t0420 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGE_t0290 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGE_t0110 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGE_t0100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGE_t0450 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGE_t0060 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGE_t0080 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGE_t0500 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RGE_t0230 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGE_t0460 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGE_t0330 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGE_t0190 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGE_t0320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGE_t0300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGE_t0370 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGE_t0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGE_t0090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGE_t0200 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGE_t0050 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RGE_t0020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RGE_t0240 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGE_t0170 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGE_t0210 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGE_t0120 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D RGE_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGE_r0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGE_r0080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGE_r0050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGE_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGE_r0070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGE_r0040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGE_srp0010 bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D RGE_rnp0010 ribonuclease P RNA component K01978 rnpB; M1 RNA
D RGE_tm0010 transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RGE_05450 kduD; 2-deoxy-D-gluconate 3-dehydrogenase KduD K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D RGE_14230 short-chain dehydrogenase/reductase SDR K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D RGE_14690 ygbJ; 3-hydroxyisobutyrate dehydrogenase YgbJ K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D RGE_07270 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D RGE_39240 coxS; carbon monoxide dehydrogenase, small subunit CoxS K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RGE_39260 coxM; carbon monoxide dehydrogenase, medium subunit CoxM K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RGE_39250 coxL; carbon monoxide dehydrogenase large chain CoxL K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RGE_02820 pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RGE_24430 alcohol dehydrogenase, zinc-binding domain protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D RGE_40530 pqqC; coenzyme PQQ biosynthesis protein C PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D RGE_23230 iorA; isoquinoline 1-oxidoreductase subunit alpha IorA K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RGE_23240 iorB; isoquinoline 1-oxidoreductase subunit beta IorB K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RGE_18830 NADP oxidoreductase, coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D RGE_16000 putative electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RGE_43140 fixC; putative electron transfer flavoprotein ubiquinone oxidoreductase (ETF-QO) subunit FixC K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D RGE_15540 putative oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGE_33370 alcohol dehydrogenase, zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGE_13980 qor; putative quinone oxidoreductase Qor K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGE_19430 azoR; FMN-dependent NADH-azoreductase AzoR K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RGE_31290 ahpF; alkyl hydroperoxide reductase subunit F AhpF K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D RGE_28840 multiheme cytochrome domain protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D RGE_23930 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RGE_24300 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RGE_29250 glutathione S transferase domain containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RGE_28810 glutathione S transferase domain containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RGE_25540 hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RGE_43230 oxidoreductase molybdopterin binding K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RGE_03750 ccp; cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RGE_28790 putative manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D RGE_32620 putative oxidoreductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RGE_31310 putative oxidoreductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RGE_31280 ahpC; alkyl hydroperoxide reductase subunit C AhpC K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D RGE_23990 ohr; organic hydroperoxide resistance protein Ohr K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RGE_13630 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RGE_00400 pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RGE_29670 pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RGE_41750 hypothetical protein K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D RGE_43900 ybiX; PKHD-type hydroxylase YbiX K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D RGE_28000 putative dehydrogenase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D RGE_21420 fpr; ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RGE_20790 putative tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RGE_20780 arsC; putative arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RGE_40550 pqqE; coenzyme PQQ synthesis protein E PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D RGE_03810 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein NrdG K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RGE_05290 pflA; pyruvate formate-lyase activating enzyme PflA K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RGE_17500 pflA; pyruvate formate-lyase activating enzyme PflA K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RGE_33350 pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase Pcm K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RGE_35060 pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase Pcm K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RGE_44920 cfa; cyclopropane-fatty-acyl-phospholipid synthase Cfa K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RGE_44340 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RGE_24860 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RGE_18370 putative 3-oxoacyl-[acyl-carrier-protein] synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D RGE_43680 lnt; apolipoprotein N-acyltransferase Lnt K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RGE_26600 putative N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D RGE_02350 putative N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D RGE_13030 putative N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RGE_15450 putative N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RGE_21460 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RGE_34600 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D RGE_21450 ate; putative arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RGE_42860 draT; ADP-ribosyltransferase DraT K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D RGE_06220 modD; putative molybdenum utilization protein ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D RGE_20500 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D RGE_18660 lgt; prolipoprotein diacylglyceryl transferase Lgt K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RGE_19230 nosX; nitrous-oxide reductase protein NosX, putative K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RGE_21050 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RGE_14700 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D RGE_27230 putative phosphotransferase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RGE_44830 glnE; glutamine synthetase adenylyltransferase GlnE K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RGE_24310 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RGE_43530 aceK; isocitrate dehydrogenase kinase/phosphatase AceK K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D RGE_45100 hprK; HPr kinase/phosphorylase HprK K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RGE_17750 hypothetical protein K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D RGE_17280 alpha/beta hydrolase fold K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D RGE_12160 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RGE_23530 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGE_16040 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGE_39100 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGE_21550 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RGE_33840 sixA; putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RGE_14500 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RGE_36880 putative HD-GYP hydrolase domain containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RGE_21650 putative endodeoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RGE_26060 putative endodeoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RGE_37820 SNase-like nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D RGE_21600 putative lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D RGE_42850 draG; ADP-ribosyl-[dinitrogen reductase] glycohydrolase DraG K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]
D RGE_04560 def; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RGE_24130 def; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RGE_44820 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RGE_36770 putative adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D RGE_41170 hypothetical protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D RGE_21630 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RGE_34580 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RGE_23210 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RGE_25380 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RGE_00610 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RGE_14710 hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D RGE_39890 phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D RGE_27420 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RGE_27980 squalene/phytoene synthase K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D RGE_31510 aminotransferase K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D RGE_14420 metB; cystathionine gamma-lyase MetB K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43]
D RGE_14720 hyi; hydroxypyruvate isomerase Hyi K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D RGE_43760 methylmalonyl-CoA mutase, putative K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D RGE_40110 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RGE_40120 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RGE_42160 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D RGE_32640 dnaL; ATP dependent DNA ligase DnaL K26441 lig; DNA ligase [EC:6.5.1.1]
D RGE_20990 rnfD; electron transport complex, RnfABCDGE type, D subunit RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D RGE_20980 rnfC; electron transport complex, RnfABCDGE type, C subunit RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RGE_20960 rnfB; electron transport complex, RnfABCDGE type, B subunit/ferredoxin RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RGE_15360 rnfB; electron transport complex, RnfABCDGE type, B subunit RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RGE_31950 copper-translocating P-type ATPase:heavy metal translocating P-type ATPase CtpA K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RGE_21910 calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RGE_06190 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RGE_11440 fdhD; formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D RGE_08900 fdrA; protein FdrA K02381 fdrA; FdrA protein
D RGE_15480 fdx; [2Fe-2S] ferredoxin Fdx K04755 fdx; ferredoxin, 2Fe-2S
D RGE_43090 fdx; ferredoxin, 2Fe-2S type, ISC system Fdx K04755 fdx; ferredoxin, 2Fe-2S
D RGE_23420 fdxA; 4Fe-4S ferredoxin, iron-sulfur binding FdxA K05524 fdxA; ferredoxin
D RGE_21140 fdxA; 4Fe-4S ferredoxin, iron-sulfur binding FdxA K05524 fdxA; ferredoxin
D RGE_21000 rnfG; electron transport complex, RnfABCDGE type, G subunit RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D RGE_21010 rnfE; electron transport complex, RnfABCDGE type, E subunit RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RGE_21020 rnfA; electron transport complex, RnfABCDGE type, A subunit RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RGE_15430 iscU; Fe-S cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D RGE_43050 iscU; Fe-S cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D RGE_43010 nifQ; nitrogen fixation protein, molybdenum ion binding NifQ K15790 nifQ; nitrogen fixation protein NifQ
D RGE_29470 CitB domain protein K13795 citB; citrate/tricarballylate utilization protein
D RGE_29460 cobZ; precorrin 3B synthase CobZ K13796 cobZ; tricarballylate dehydrogenase
D RGE_07160 norD; nitric oxide reductase activation protein NorD K02448 norD; nitric oxide reductase NorD protein
D RGE_22910 putative cytochrome c oxidase subunit 3 K02164 norE; nitric oxide reductase NorE protein
D RGE_07180 norQ; denitrification regulatory protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D RGE_42970 nifX; nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX
D RGE_42760 fixU; NifT/FixU family protein K02593 nifT; nitrogen fixation protein NifT
D RGE_42720 nifZ; nitrogen fixation protein NifZ K02597 nifZ; nitrogen fixation protein NifZ
D RGE_42730 nifZ; putative NifZ protein K02597 nifZ; nitrogen fixation protein NifZ
D RGE_42670 nifB; nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D RGE_42960 nifN; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D RGE_42950 nifE; nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D RGE_22060 napC; NapC/NirT cytochrome c domain protein K02569 napC; cytochrome c-type protein NapC
D RGE_07170 4Fe-4S ferredoxin iron-sulfur binding K02574 napH; ferredoxin-type protein NapH
D RGE_27810 etfS; electron transfer flavoprotein beta-subunit EtfS K03521 fixA; electron transfer flavoprotein beta subunit
D RGE_43120 fixA; putative electron transfer flavoprotein beta-subunit FixA K03521 fixA; electron transfer flavoprotein beta subunit
D RGE_43150 fixX; electron transfer flavoprotein ubiquinone oxidoreductase (ETF-QO) subunit FixX K03855 fixX; ferredoxin like protein
D RGE_43110 nifW; nitrogenase-stabilizing/protective protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
D RGE_06600 nirC; cytochrome c55X NirC K19344 nirC; cytochrome c55X
D RGE_06610 nirF; heme d1 biosynthesis protein NirF K19345 nirF; protein NirF
D RGE_22830 hypothetical protein K21694 cowN; N(2)-fixation sustaining protein CowN
C 99983 Lipid metabolism
D RGE_26710 aidB; isovaleryl coenzyme A dehydrogenase AidB K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RGE_30770 hypothetical protein K06997 yggS; PLP dependent protein
D RGE_00800 alanine racemase domain-containing protein K06997 yggS; PLP dependent protein
D RGE_36910 putative N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D RGE_13850 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D RGE_13840 TPR repeat protein K19804 lapB; lipopolysaccharide assembly protein B
D RGE_03760 ybhN; membrane protein, putative YbhN K07027 K07027; glycosyltransferase 2 family protein
D RGE_44870 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D RGE_44530 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D RGE_36440 hemY; putative protoporphyrinogen IX and coproporphyrinogen III oxidase HemY K02498 hemY; HemY protein
D RGE_06650 nirJ; heme d1 biosynthesis protein NirJ K24868 nirJ; heme d1 biosynthesis protein
D RGE_10910 ubiB; 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway UbiB K03688 ubiB; ubiquinone biosynthesis protein
D RGE_10900 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D RGE_03860 sterol-binding domain protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D RGE_16600 alpha/beta hydrolase fold K06049 bchO; magnesium chelatase accessory protein
D RGE_46240 alpha/beta hydrolase fold K06049 bchO; magnesium chelatase accessory protein
D RGE_44500 Mg-chelatase subunit ChlD-like protein K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
D RGE_22310 NADPH-dependent FMN reductase domain protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D RGE_38050 DoxX family protein K15977 K15977; putative oxidoreductase
D RGE_13130 putative esterase K06999 K06999; phospholipase/carboxylesterase
D RGE_34220 putative esterase K06999 K06999; phospholipase/carboxylesterase
D RGE_11070 putative N-acetyltransferase K09181 yfiQ; acetyltransferase
D RGE_07460 putative N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RGE_31720 csp; cold shock protein K03704 cspA; cold shock protein
D RGE_29340 cold shock protein K03704 cspA; cold shock protein
D RGE_02510 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D RGE_24480 RNA-binding S1 domain-containing protein K06959 tex; protein Tex
C 99974 Translation
D RGE_18400 putative ABC transporter ATP-binding protein/permease K13926 rbbA; ribosome-dependent ATPase
D RGE_13180 putative RNA modifying enzyme K07576 K07576; metallo-beta-lactamase family protein
D RGE_11060 hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D RGE_31710 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RGE_27950 tig; trigger factor K03545 tig; trigger factor
D RGE_43240 ferric reductase-like transmembrane component-like K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RGE_11390 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D RGE_40740 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D RGE_40750 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D RGE_40760 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D RGE_39750 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D RGE_22440 hupE; nickel transporter K03192 ureJ; urease accessory protein
D RGE_35770 hupE; HupE/UreJ protein K03192 ureJ; urease accessory protein
D RGE_31010 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RGE_35810 hupF; hydrogenase expression/formation protein HupF K04653 hypC; hydrogenase expression/formation protein HypC
D RGE_35900 hypC; hydrogenase expression/formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D RGE_35910 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RGE_35920 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RGE_35890 hypF; hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D RGE_02530 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D RGE_15150 peptidase T1 family protein K07395 K07395; putative proteasome-type protease
D RGE_08070 hypothetical protein K07397 yhfA; putative redox protein
D RGE_02200 XdhC/CoxI family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D RGE_39950 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RGE_35340 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RGE_23580 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D RGE_18150 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D RGE_00730 hypothetical protein K07460 yraN; putative endonuclease
D RGE_04540 smf; protein Smf K04096 smf; DNA processing protein
D RGE_34100 rarA; recombination factor protein RarA K07478 ycaJ; putative ATPase
D RGE_28330 tnpR; transposon Tn2501 resolvase TnpR K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D RGE_25640 transposase, IS4 family protein K07481 K07481; transposase, IS5 family
D RGE_45660 putative transposase K07486 K07486; transposase
D RGE_45730 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RGE_11940 tnp; transposase IS116/IS110/IS902 family protein Tnp K07486 K07486; transposase
D RGE_19520 putative transposase K07486 K07486; transposase
D RGE_21960 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RGE_38820 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RGE_08270 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D RGE_17810 integrase catalytic subunit K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RGE_32990 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RGE_44940 sodium:galactoside symporter family protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RGE_12010 putative amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RGE_01370 citrate/H+ symporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D RGE_13440 pit; putative low-affinity inorganic phosphate transporter Pit K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RGE_20460 putative sodium symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RGE_19390 putative transport protein K07085 K07085; putative transport protein
C 99978 Cell growth
D RGE_24290 ispZ; putative intracellular septation protein K06190 ispZ; intracellular septation protein
D RGE_07210 ytfE; regulator of cell morphogenesis and NO signaling K07322 ytfE; regulator of cell morphogenesis and NO signaling
D RGE_00650 SpoVR family protein K06415 spoVR; stage V sporulation protein R
C 99993 Cell motility
D RGE_04940 TfoX domain protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D RGE_00250 proQ; ProP effector ProQ K03607 proQ; ProP effector
D RGE_17480 cstA; carbon starvation protein CstA K06200 cstA; carbon starvation protein
D RGE_28210 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D RGE_44190 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RGE_32630 PhoH family protein K07175 phoH2; PhoH-like ATPase
D RGE_00630 prkA; putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D RGE_43340 hypothetical protein K07182 K07182; CBS domain-containing protein
D RGE_39630 kaiB; circadian clock protein KaiB K08481 kaiB; circadian clock protein KaiB
D RGE_23270 kaiC; putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC
D RGE_39620 kaiC; putative circadian clock protein, KaiC superfamily ATPase K08482 kaiC; circadian clock protein KaiC
D RGE_14100 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
D RGE_12050 signalling protein containing EAL domain K21973 bluF; blue light- and temperature-responsive anti-repressor
C 99992 Structural proteins
D RGE_34120 lolA; outer membrane lipoproteins carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D RGE_08730 hypothetical protein K02494 lolB; outer membrane lipoprotein LolB
D RGE_08330 vacJ; VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RGE_09110 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D RGE_27300 ompH; outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D RGE_33340 nlpD; lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D RGE_04970 OmpW family protein K07275 ompW; outer membrane protein
D RGE_04730 OmpW family protein K07275 ompW; outer membrane protein
D RGE_12440 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D RGE_26490 hypothetical protein K07290 yhjG; AsmA family protein
D RGE_18410 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein
D RGE_24210 putative membrane fusion protein K01993 ABC-2.TX; HlyD family secretion protein
D RGE_43820 macA; secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D RGE_46860 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D RGE_26350 lipoprotein, putative K04062 osmB; osmotically inducible lipoprotein OsmB
D RGE_05410 creD; inner membrane protein CreD K06143 creD; inner membrane protein
D RGE_22100 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D RGE_22130 ccmH; cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RGE_22140 ccmI; putative cytochromre c biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RGE_27570 transcriptional regulator, Xre family K15539 rodZ; cytoskeleton protein RodZ
D RGE_18870 hypothetical protein K21695 aaeX; protein AaeX
C 99994 Others
D RGE_33150 phoU; phosphate transport system protein PhoU K02039 phoU; phosphate transport system protein
D RGE_07500 bfd; bacterioferritin-associated ferredoxin protein Bfd K02192 bfd; bacterioferritin-associated ferredoxin
D RGE_24500 mdoG; periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D RGE_43870 integral membrane protein, TerC family K05794 terC; tellurite resistance protein TerC
D RGE_02930 apaG; protein apaG K06195 apaG; ApaG protein
D RGE_08150 hypothetical protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D RGE_36530 cation-binding protein, hemerythrin HHE family K07216 hr; hemerythrin
D RGE_19190 nosD; copper-binding periplasmic protein NosD K07218 nosD; nitrous oxidase accessory protein
D RGE_39210 transcriptional regulator, LysR family K07219 K07219; putative molybdopterin biosynthesis protein
D RGE_06030 hmuS; hemin transport protein HmuS K07225 hmuS; putative hemin transport protein
D RGE_21370 nnrS; NnrS K07234 K07234; uncharacterized protein involved in response to NO
D RGE_18720 nnrS; NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D RGE_17450 ychN; protein YchN K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
D RGE_19160 nosL; NosL family protein K19342 nosL; copper chaperone NosL
D RGE_19150 hypothetical protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RGE_12590 cvpA; membrane protein, required for colicin V production CvpA K03558 cvpA; membrane protein required for colicin V production
D RGE_24440 putative N-acetyltransferase K02348 elaA; ElaA protein
D RGE_27870 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D RGE_25140 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D RGE_10150 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D RGE_28600 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D RGE_40520 pqqB; coenzyme PQQ biosynthesis protein B PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D RGE_40540 pqqD; coenzyme PQQ synthesis D PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D RGE_35390 putative globin family protein K06886 glbN; hemoglobin
D RGE_07850 hypothetical protein K07001 K07001; NTE family protein
D RGE_23470 hypothetical protein K07001 K07001; NTE family protein
D RGE_10260 hypothetical protein K07001 K07001; NTE family protein
D RGE_10310 pdxP; pyridoxine 5'-phosphate phosphatase PdxP K07025 K07025; putative hydrolase of the HAD superfamily
D RGE_07600 erpA; putative iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D RGE_43060 erpA; putative iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D RGE_09740 hypothetical protein K07038 K07038; inner membrane protein
D RGE_31300 putative ribonuclease K07058 K07058; membrane protein
D RGE_15750 putative ribonuclease K07058 K07058; membrane protein
D RGE_29390 glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D RGE_12080 glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D RGE_06160 LemA family protein K03744 lemA; LemA protein
D RGE_44670 LemA family protein K03744 lemA; LemA protein
D RGE_02160 LemA family protein K03744 lemA; LemA protein
D RGE_05970 SlyX family protein K03745 slyX; SlyX protein
D RGE_04530 smg; protein smg homolog K03747 smg; Smg protein
D RGE_00390 CreA family protein K05805 creA; CreA protein
D RGE_12580 hypothetical protein K03749 dedD; DedD protein
D RGE_14780 membrane-associated protein K03975 dedA; membrane-associated protein
D RGE_46420 hypothetical protein K08972 K08972; putative membrane protein
D RGE_35740 hypothetical protein K08984 yjdF; putative membrane protein
D RGE_24720 hypothetical protein K08995 K08995; putative membrane protein
D RGE_34290 hypothetical protein K09858 K09858; SEC-C motif domain protein
D RGE_35830 hupH; hydrogenase expression/formation protein HupH K03618 hyaF; hydrogenase-1 operon protein HyaF
D RGE_35820 hupG; hydrogenase expression/formation protein HupG K03619 hyaE; hydrogenase-1 operon protein HyaE
C 99997 Function unknown
D RGE_26050 ankyrin repeat protein K06867 K06867; uncharacterized protein
D RGE_05660 ankyrin repeat protein K06867 K06867; uncharacterized protein
D RGE_25250 anaerobic sulfatase-maturating enzyme K06871 K06871; uncharacterized protein
D RGE_35270 radical SAM domain-containing protein K06871 K06871; uncharacterized protein
D RGE_02170 hypothetical membrane protein K06872 K06872; uncharacterized protein
D RGE_26450 peptidase S9 family protein K06889 K06889; uncharacterized protein
D RGE_21330 hypothetical protein K06889 K06889; uncharacterized protein
D RGE_40240 hypothetical protein K06913 K06913; uncharacterized protein
D RGE_10340 hypothetical protein K06923 K06923; uncharacterized protein
D RGE_15130 hypothetical protein K06934 K06934; uncharacterized protein
D RGE_43380 hypothetical protein K06938 K06938; uncharacterized protein
D RGE_35150 hypothetical protein K06938 K06938; uncharacterized protein
D RGE_00540 hypothetical protein K06940 K06940; uncharacterized protein
D RGE_13240 hypothetical protein K06940 K06940; uncharacterized protein
D RGE_42360 hypothetical protein K06950 K06950; uncharacterized protein
D RGE_10330 hypothetical protein K06953 K06953; uncharacterized protein
D RGE_44900 putative dehydrogenase K06954 K06954; uncharacterized protein
D RGE_11590 putative hydrolase K06978 K06978; uncharacterized protein
D RGE_24790 hypothetical protein K06986 K06986; uncharacterized protein
D RGE_20160 peptidase C39 family protein K06992 K06992; uncharacterized protein
D RGE_26980 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D RGE_42170 hypothetical protein K07000 K07000; uncharacterized protein
D RGE_11230 putative exporters of the RND superfamily protein K07003 K07003; uncharacterized protein
D RGE_15760 endonuclease/exonuclease/phosphatase family protein K07004 K07004; uncharacterized protein
D RGE_09990 pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07006 K07006; uncharacterized protein
D RGE_44110 hypothetical protein K07018 K07018; uncharacterized protein
D RGE_01560 putative hydrolase K07019 K07019; uncharacterized protein
D RGE_14620 hypothetical protein K07020 K07020; uncharacterized protein
D RGE_35230 hypothetical protein K07028 K07028; uncharacterized protein
D RGE_38700 glyoxalase/bleomycin resistance protein/dioxygenase K07032 K07032; uncharacterized protein
D RGE_19420 hypothetical protein K07034 K07034; uncharacterized protein
D RGE_01130 yecA family protein K07039 K07039; uncharacterized protein
D RGE_34890 hypothetical protein K07039 K07039; uncharacterized protein
D RGE_29020 hypothetical protein K07039 K07039; uncharacterized protein
D RGE_09840 putative nucleotidyltransferase K07075 K07075; uncharacterized protein
D RGE_37000 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein K07077 K07077; uncharacterized protein
D RGE_36830 hypothetical protein K07090 K07090; uncharacterized protein
D RGE_35450 hypothetical protein K07090 K07090; uncharacterized protein
D RGE_37130 hypothetical protein K07090 K07090; uncharacterized protein
D RGE_15310 hypothetical protein K07090 K07090; uncharacterized protein
D RGE_20480 hypothetical protein K07093 K07093; uncharacterized protein
D RGE_22870 putative metallophosphoesterase K07098 K07098; uncharacterized protein
D RGE_27440 hypothetical protein K07101 K07101; uncharacterized protein
D RGE_25270 hypothetical protein K07112 K07112; uncharacterized protein
D RGE_25280 hypothetical protein K07112 K07112; uncharacterized protein
D RGE_24080 SET domain protein K07117 K07117; uncharacterized protein
D RGE_44730 SET domain protein K07117 K07117; uncharacterized protein
D RGE_46840 SET domain protein K07117 K07117; uncharacterized protein
D RGE_01040 ammonia monooxygenase family protein K07120 K07120; uncharacterized protein
D RGE_36130 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D RGE_30760 hypothetical protein K07136 K07136; uncharacterized protein
D RGE_28420 radical SAM domain-containing protein K07139 K07139; uncharacterized protein
D RGE_41710 MOSC domain containing protein K07140 K07140; MOSC domain-containing protein
D RGE_08780 hypothetical protein K07157 K07157; uncharacterized protein
D RGE_39290 vWA domain containing CoxE-like family protein K07161 K07161; uncharacterized protein
D RGE_47040 hypothetical protein K08998 K08998; uncharacterized protein
D RGE_31960 orf158; hypothetical protein orf158 K09005 K09005; uncharacterized protein
D RGE_15270 hypothetical protein K09117 K09117; uncharacterized protein
D RGE_44710 hypothetical protein K09131 K09131; uncharacterized protein
D RGE_40320 hypothetical protein K09154 K09154; uncharacterized protein
D RGE_44080 hypothetical protein K09158 K09158; uncharacterized protein
D RGE_08850 putative ATPase K09384 K09384; uncharacterized protein
D RGE_00290 carbon monoxide dehydrogenase subunit G (CoxG) family protein K09386 K09386; uncharacterized protein
D RGE_44910 hypothetical protein K09701 K09701; uncharacterized protein
D RGE_14220 hypothetical protein K09705 K09705; uncharacterized protein
D RGE_38620 hypothetical protein K09781 K09781; uncharacterized protein
D RGE_00640 hypothetical protein K09786 K09786; uncharacterized protein
D RGE_11510 hypothetical protein K09790 K09790; uncharacterized protein
D RGE_32010 hypothetical protein K09791 K09791; uncharacterized protein
D RGE_31840 hypothetical protein K09792 K09792; uncharacterized protein
D RGE_23870 hypothetical protein K09793 K09793; uncharacterized protein
D RGE_34920 hypothetical protein K09797 K09797; uncharacterized protein
D RGE_30990 hypothetical protein K09801 K09801; uncharacterized protein
D RGE_20630 hypothetical protein K09822 K09822; uncharacterized protein
D RGE_28510 hypothetical protein K09857 K09857; uncharacterized protein
D RGE_13140 hypothetical protein K09861 K09861; uncharacterized protein
D RGE_42660 yacG; zinc-binding protein YacG K09862 K09862; uncharacterized protein
D RGE_16030 hypothetical protein K09915 K09915; uncharacterized protein
D RGE_28160 hypothetical protein K09919 K09919; uncharacterized protein
D RGE_05130 hypothetical protein K09921 K09921; uncharacterized protein
D RGE_13420 hypothetical protein K09922 K09922; uncharacterized protein
D RGE_02970 hypothetical protein K09924 K09924; uncharacterized protein
D RGE_13910 hypothetical protein K09924 K09924; uncharacterized protein
D RGE_38060 hypothetical protein K09930 K09930; uncharacterized protein
D RGE_27470 hypothetical protein K09937 K09937; uncharacterized protein
D RGE_07830 hypothetical protein K09950 K09950; uncharacterized protein
D RGE_02040 GumN family protein K09973 K09973; uncharacterized protein
D RGE_38120 hypothetical protein K09975 K09975; uncharacterized protein
D RGE_36930 hypothetical protein K09989 K09989; uncharacterized protein
D RGE_13430 hypothetical protein K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 6, 2024