+D GENES KO
#
KEGG Orthology (KO) - Rhodanobacter denitrificans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rhd00010]
D R2APBS1_3541 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_0166 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_3909 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R2APBS1_0376 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D R2APBS1_0026 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D R2APBS1_0553 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D R2APBS1_2129 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D R2APBS1_0549 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R2APBS1_0559 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D R2APBS1_3753 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D R2APBS1_2290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R2APBS1_0551 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D R2APBS1_2254 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D R2APBS1_3483 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D R2APBS1_3455 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3732 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R2APBS1_1423 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R2APBS1_0784 Zn-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_0014 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R2APBS1_3679 galactose mutarotase-like enzyme K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D R2APBS1_3910 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R2APBS1_0585 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3851 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_0612 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:rhd00020]
D R2APBS1_3347 citrate synthase I, hexameric type K01647 CS; citrate synthase [EC:2.3.3.1]
D R2APBS1_1528 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D R2APBS1_3737 isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D R2APBS1_2605 isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D R2APBS1_1495 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D R2APBS1_1494 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_0698 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D R2APBS1_0697 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D R2APBS1_2304 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D R2APBS1_2375 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R2APBS1_0213 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R2APBS1_2374 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R2APBS1_0212 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R2APBS1_2377 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R2APBS1_0215 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R2APBS1_2376 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R2APBS1_0214 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R2APBS1_3193 hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D R2APBS1_1508 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D R2APBS1_1541 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R2APBS1_0612 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D R2APBS1_3483 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D R2APBS1_3455 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rhd00030]
D R2APBS1_3909 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R2APBS1_3906 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R2APBS1_0132 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R2APBS1_0131 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D R2APBS1_0109 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D R2APBS1_3436 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D R2APBS1_0557 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D R2APBS1_3911 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D R2APBS1_3908 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D R2APBS1_3378 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D R2APBS1_2147 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D R2APBS1_2911 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D R2APBS1_3958 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D R2APBS1_2909 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D R2APBS1_3910 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R2APBS1_0585 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3851 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_0954 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D R2APBS1_0130 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D R2APBS1_0129 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D R2APBS1_0084 choline dehydrogenase-like flavoprotein K19813 gdh; glucose dehydrogenase [EC:1.1.5.9]
D R2APBS1_0553 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D R2APBS1_0026 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D R2APBS1_0376 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rhd00040]
D R2APBS1_2246 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R2APBS1_1805 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R2APBS1_3436 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:rhd00051]
D R2APBS1_0682 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D R2APBS1_0570 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D R2APBS1_0585 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3851 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_0376 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D R2APBS1_0026 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D R2APBS1_0553 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D R2APBS1_2129 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D R2APBS1_3141 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rhd00052]
D R2APBS1_3679 galactose mutarotase-like enzyme K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D R2APBS1_3595 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R2APBS1_2150 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R2APBS1_1805 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R2APBS1_3910 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R2APBS1_0585 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3851 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3541 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_0166 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_3424 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D R2APBS1_0376 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D R2APBS1_3426 tagatose-bisphosphate aldolase noncatalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D R2APBS1_3095 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D R2APBS1_3100 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D R2APBS1_3099 family 31 glycosyl hydrolase, alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D R2APBS1_3427 putative phosphosugar isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:rhd00053]
D R2APBS1_2246 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R2APBS1_1046 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R2APBS1_2153 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rhd00500]
D R2APBS1_3095 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D R2APBS1_3100 glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D R2APBS1_3099 family 31 glycosyl hydrolase, alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D R2APBS1_1805 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R2APBS1_0175 beta-glucosidase-like glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D R2APBS1_3923 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D R2APBS1_3175 glycosyltransferase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D R2APBS1_3176 glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D R2APBS1_3098 glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D R2APBS1_0694 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D R2APBS1_0458 neutral trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D R2APBS1_3910 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R2APBS1_0585 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3851 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3541 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_0166 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_3909 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R2APBS1_0682 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rhd00520]
D R2APBS1_2226 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D R2APBS1_0168 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D R2APBS1_0136 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D R2APBS1_0682 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D R2APBS1_0566 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R2APBS1_0134 putative phosphosugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R2APBS1_2133 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D R2APBS1_3771 glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D R2APBS1_3845 molecular chaperone K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D R2APBS1_1194 2-phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D R2APBS1_1072 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D R2APBS1_1071 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D R2APBS1_3130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R2APBS1_2417 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R2APBS1_3055 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D R2APBS1_3317 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D R2APBS1_2152 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D R2APBS1_3701 nucleoside-diphosphate-sugar epimerase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D R2APBS1_3101 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D R2APBS1_3541 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_0166 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_3910 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R2APBS1_0585 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3851 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_1805 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R2APBS1_2246 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R2APBS1_3595 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R2APBS1_2150 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R2APBS1_1046 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R2APBS1_2153 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R2APBS1_3141 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D R2APBS1_3909 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R2APBS1_0570 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D R2APBS1_1093 putative PLP-dependent enzyme possibly involved in cell wall biogenesis K13010 per; perosamine synthetase [EC:2.6.1.102]
D R2APBS1_0322 2-polyprenylphenol hydroxylase-like oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:rhd00620]
D R2APBS1_0014 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R2APBS1_3483 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D R2APBS1_3455 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_1423 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R2APBS1_3732 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R2APBS1_0784 Zn-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D R2APBS1_2146 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D R2APBS1_0551 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D R2APBS1_1024 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D R2APBS1_0340 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D R2APBS1_0339 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D R2APBS1_1351 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D R2APBS1_0946 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_2304 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D R2APBS1_0383 lactoylglutathione lyase-like lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D R2APBS1_2260 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D R2APBS1_3484 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D R2APBS1_1541 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R2APBS1_3193 hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D R2APBS1_1508 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D R2APBS1_3293 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D R2APBS1_0612 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D R2APBS1_2254 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D R2APBS1_3600 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_3651 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rhd00630]
D R2APBS1_3601 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D R2APBS1_0014 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R2APBS1_3600 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D R2APBS1_1541 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R2APBS1_3347 citrate synthase I, hexameric type K01647 CS; citrate synthase [EC:2.3.3.1]
D R2APBS1_1528 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2389 3-oxoacyl-(acyl-carrier-protein) reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D R2APBS1_2658 3-oxoacyl-(acyl-carrier-protein) reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D R2APBS1_2636 catalase K03781 katE; catalase [EC:1.11.1.6]
D R2APBS1_0558 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D R2APBS1_0079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R2APBS1_0770 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R2APBS1_1587 glycine dehydrogenase, decarboxylating K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D R2APBS1_0594 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_0595 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D R2APBS1_0842 putative kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D R2APBS1_0129 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D R2APBS1_1168 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:rhd00640]
D R2APBS1_0014 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R2APBS1_1542 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D R2APBS1_2146 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D R2APBS1_0531 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D R2APBS1_0530 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D R2APBS1_1276 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D R2APBS1_0529 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_1491 putative quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D R2APBS1_1024 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D R2APBS1_0340 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D R2APBS1_0339 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D R2APBS1_1351 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D R2APBS1_0795 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D R2APBS1_1086 4-aminobutyrate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D R2APBS1_0697 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D R2APBS1_0698 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D R2APBS1_1547 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D R2APBS1_1550 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D R2APBS1_2542 uncharacterized protein involved in propionate catabolism K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D R2APBS1_1546 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:rhd00650]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_1779 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D R2APBS1_2583 enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D R2APBS1_2220 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D R2APBS1_1482 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D R2APBS1_1481 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE
D R2APBS1_0745 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D R2APBS1_2389 3-oxoacyl-(acyl-carrier-protein) reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D R2APBS1_2658 3-oxoacyl-(acyl-carrier-protein) reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D R2APBS1_0797 acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D R2APBS1_0796 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D R2APBS1_2375 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R2APBS1_0213 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R2APBS1_2374 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R2APBS1_0212 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R2APBS1_2377 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R2APBS1_0215 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R2APBS1_2376 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R2APBS1_0214 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R2APBS1_0795 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D R2APBS1_1086 4-aminobutyrate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D R2APBS1_2304 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D R2APBS1_1229 isopropylmalate/homocitrate/citramalate synthase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D R2APBS1_0883 3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D R2APBS1_3858 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D R2APBS1_1536 3HB-oligomer hydrolase (3HBOH) K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D R2APBS1_3658 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R2APBS1_3659 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rhd00660]
D R2APBS1_3658 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R2APBS1_3659 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D R2APBS1_0697 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D R2APBS1_0698 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D R2APBS1_3653 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D R2APBS1_3654 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D R2APBS1_3655 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rhd00562]
D R2APBS1_3119 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D R2APBS1_2129 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rhd00190]
D R2APBS1_1459 NADH:ubiquinone oxidoreductase subunit 3 (chain A) K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D R2APBS1_1460 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D R2APBS1_1461 NADH:ubiquinone oxidoreductase 27 kD subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D R2APBS1_1462 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D R2APBS1_1463 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D R2APBS1_1464 NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D R2APBS1_1465 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D R2APBS1_1466 NADH:ubiquinone oxidoreductase subunit 1 (chain H) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D R2APBS1_1467 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D R2APBS1_1468 NADH:ubiquinone oxidoreductase subunit 6 (chain J) K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D R2APBS1_1469 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D R2APBS1_1470 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D R2APBS1_1471 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D R2APBS1_1472 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D R2APBS1_0209 NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D R2APBS1_2375 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R2APBS1_0213 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R2APBS1_2374 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R2APBS1_0212 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R2APBS1_2377 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R2APBS1_0215 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R2APBS1_2376 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R2APBS1_0214 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R2APBS1_2943 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D R2APBS1_2942 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D R2APBS1_2941 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D R2APBS1_0283 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D R2APBS1_0278 heme/copper-type cytochrome/quinol oxidase, subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D R2APBS1_0276 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D R2APBS1_2483 heme/copper-type cytochrome/quinol oxidase, subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D R2APBS1_2874 cytochrome c2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D R2APBS1_0275 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D R2APBS1_2482 heme/copper-type cytochrome/quinol oxidase, subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D R2APBS1_0282 uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D R2APBS1_2184 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D R2APBS1_1694 Cbb3-type cytochrome oxidase, subunit 1 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D R2APBS1_2185 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D R2APBS1_1695 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D R2APBS1_2186 Cbb3-type cytochrome oxidase component FixQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D R2APBS1_2187 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D R2APBS1_1700 cytochrome bd-type quinol oxidase, subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D R2APBS1_3369 cytochrome bd-type quinol oxidase, subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D R2APBS1_1699 cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D R2APBS1_3370 cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D R2APBS1_3371 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D R2APBS1_3776 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D R2APBS1_3774 ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D R2APBS1_3775 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D R2APBS1_3777 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D R2APBS1_3773 ATP synthase, F1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D R2APBS1_3780 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D R2APBS1_3778 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D R2APBS1_3779 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D R2APBS1_0369 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D R2APBS1_2415 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R2APBS1_2611 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R2APBS1_0947 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rhd00680]
D R2APBS1_3732 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R2APBS1_1158 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D R2APBS1_0770 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R2APBS1_2290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R2APBS1_3293 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D R2APBS1_1541 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R2APBS1_0553 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D R2APBS1_0026 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D R2APBS1_0376 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D R2APBS1_0788 NADH:flavin oxidoreductase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D R2APBS1_2146 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D R2APBS1_0014 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R2APBS1_2254 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D R2APBS1_3753 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D R2APBS1_1056 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R2APBS1_1613 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:rhd00910]
D R2APBS1_2892 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D R2APBS1_2893 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D R2APBS1_2898 respiratory nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2897 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2895 respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2921 dissimilatory nitrite reductase (NO-forming), copper type apoprotein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D R2APBS1_3667 putative multicopper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D R2APBS1_2300 nitric oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D R2APBS1_2875 nitric oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D R2APBS1_2881 nitric oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D R2APBS1_2771 nitrous oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D R2APBS1_1145 2-nitropropane dioxygenase-like enzyme K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D R2APBS1_1701 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D R2APBS1_1268 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D R2APBS1_0079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R2APBS1_3526 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D R2APBS1_3525 glutamate synthase small subunit family protein, proteobacterial K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D R2APBS1_1170 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rhd00920]
D R2APBS1_0593 sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D R2APBS1_0592 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D R2APBS1_0873 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D R2APBS1_1501 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D R2APBS1_1499 sulfite reductase (NADPH) flavoprotein, alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D R2APBS1_1103 sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D R2APBS1_1500 sulfite reductase (NADPH) hemoprotein, beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D R2APBS1_0159 NADH dehydrogenase, FAD-containing subunit K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D R2APBS1_2580 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R2APBS1_0631 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R2APBS1_1504 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R2APBS1_2294 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R2APBS1_2884 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R2APBS1_2401 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D R2APBS1_0632 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D R2APBS1_0633 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D R2APBS1_3224 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rhd00061]
D R2APBS1_1024 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D R2APBS1_0340 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D R2APBS1_0339 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D R2APBS1_1351 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D R2APBS1_1449 acyl carrier protein K02078 acpP; acyl carrier protein
D R2APBS1_1089 acyl carrier protein K02078 acpP; acyl carrier protein
D R2APBS1_3769 acyl carrier protein K02078 acpP; acyl carrier protein
D R2APBS1_1447 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D R2APBS1_1446 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D R2APBS1_2913 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R2APBS1_3758 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R2APBS1_1450 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R2APBS1_1448 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_1172 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_3762 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_2914 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D R2APBS1_1032 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R2APBS1_3767 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R2APBS1_2220 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D R2APBS1_1526 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rhd00071]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_1780 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D R2APBS1_1779 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R2APBS1_0615 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D R2APBS1_1272 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D R2APBS1_1526 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R2APBS1_2579 enoyl-CoA hydratase/carnithine racemase K13238 ECI1; Delta3-Delta2-enoyl-CoA isomerase [EC:5.3.3.8]
D R2APBS1_0314 NAD(P)H-nitrite reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D R2APBS1_3732 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R2APBS1_1423 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rhd00561]
D R2APBS1_0842 putative kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_0393 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D R2APBS1_3563 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D R2APBS1_0893 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D R2APBS1_3424 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rhd00564]
D R2APBS1_3546 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D R2APBS1_2538 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D R2APBS1_0739 Fe-S oxidoreductase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D R2APBS1_3563 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D R2APBS1_0893 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D R2APBS1_2671 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D R2APBS1_1759 patatin K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D R2APBS1_3631 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D R2APBS1_1306 phospholipid N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D R2APBS1_1037 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D R2APBS1_3585 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D R2APBS1_0829 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D R2APBS1_3060 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D R2APBS1_1338 phosphatidylserine decarboxylase precursor K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D R2APBS1_1618 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D R2APBS1_0782 phosphatidylglycerophosphatase A-like protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D R2APBS1_3394 hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D R2APBS1_2192 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D R2APBS1_0474 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D R2APBS1_2560 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D R2APBS1_1790 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D R2APBS1_3865 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:rhd00565]
D R2APBS1_2539 FAD/FMN-dependent dehydrogenase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D R2APBS1_2671 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:rhd00600]
D R2APBS1_0443 O-glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D R2APBS1_3424 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D R2APBS1_0168 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism [PATH:rhd00590]
D R2APBS1_2671 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D R2APBS1_3576 aminopeptidase N K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
C 00591 Linoleic acid metabolism
D R2APBS1_2671 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:rhd00592]
D R2APBS1_2671 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D R2APBS1_1759 patatin K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D R2APBS1_1780 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rhd01040]
D R2APBS1_3550 fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D R2APBS1_0203 fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D R2APBS1_0880 lysophospholipase L1-like esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D R2APBS1_2716 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rhd00230]
D R2APBS1_2957 NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D R2APBS1_0872 ADP-ribose pyrophosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D R2APBS1_2909 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D R2APBS1_3910 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R2APBS1_0585 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3851 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_0954 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D R2APBS1_1419 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D R2APBS1_3687 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D R2APBS1_3124 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D R2APBS1_2720 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D R2APBS1_0751 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D R2APBS1_3123 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D R2APBS1_2933 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D R2APBS1_2934 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D R2APBS1_3439 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D R2APBS1_1507 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D R2APBS1_0335 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R2APBS1_0736 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D R2APBS1_1270 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D R2APBS1_2283 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R2APBS1_2908 purine-nucleoside phosphorylase, DeoD family K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D R2APBS1_0702 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D R2APBS1_2225 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D R2APBS1_1769 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D R2APBS1_1777 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D R2APBS1_3363 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D R2APBS1_3836 GMP synthase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R2APBS1_1768 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R2APBS1_3360 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D R2APBS1_1902 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_1903 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_0415 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_3606 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_1901 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_3608 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D R2APBS1_3352 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D R2APBS1_2612 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D R2APBS1_3168 (p)ppGpp synthetase, RelA/SpoT family K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D R2APBS1_2227 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R2APBS1_1565 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D R2APBS1_0394 sugar kinase, ribokinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D R2APBS1_3496 AMP nucleosidase, putative K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D R2APBS1_2926 putative Rossmann fold nucleotide-binding protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D R2APBS1_3635 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D R2APBS1_0377 adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D R2APBS1_0874 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D R2APBS1_3258 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D R2APBS1_0593 sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D R2APBS1_0592 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:rhd00240]
D R2APBS1_1818 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D R2APBS1_1819 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D R2APBS1_0855 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D R2APBS1_3538 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D R2APBS1_2418 dihydroorotate dehydrogenase, subfamily 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D R2APBS1_3849 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D R2APBS1_0768 orotidine 5''-phosphate decarboxylase, subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D R2APBS1_1040 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D R2APBS1_1777 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D R2APBS1_0874 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D R2APBS1_1149 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D R2APBS1_0527 putative metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D R2APBS1_2292 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D R2APBS1_1812 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D R2APBS1_1270 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D R2APBS1_2283 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R2APBS1_1059 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D R2APBS1_3635 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D R2APBS1_2926 putative Rossmann fold nucleotide-binding protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D R2APBS1_0927 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D R2APBS1_1326 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D R2APBS1_1902 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_1903 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_0415 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_3606 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_1901 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_3608 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D R2APBS1_1454 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D R2APBS1_3852 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D R2APBS1_2910 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D R2APBS1_3557 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D R2APBS1_0902 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D R2APBS1_0352 nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rhd00250]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R2APBS1_2915 aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D R2APBS1_0937 L-asparaginase/GlutRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D R2APBS1_0886 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D R2APBS1_3076 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R2APBS1_1668 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R2APBS1_0430 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R2APBS1_1520 putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D R2APBS1_3487 aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D R2APBS1_2178 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D R2APBS1_1206 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D R2APBS1_1210 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D R2APBS1_1565 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D R2APBS1_1507 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D R2APBS1_0855 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D R2APBS1_0795 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D R2APBS1_1086 4-aminobutyrate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D R2APBS1_3526 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D R2APBS1_3525 glutamate synthase small subunit family protein, proteobacterial K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D R2APBS1_1268 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D R2APBS1_0798 NAD-dependent aldehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D R2APBS1_0273 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D R2APBS1_0079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R2APBS1_1818 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D R2APBS1_1819 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D R2APBS1_0566 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R2APBS1_0134 putative phosphosugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R2APBS1_1419 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rhd00260]
D R2APBS1_3192 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D R2APBS1_1343 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R2APBS1_0634 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R2APBS1_3647 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R2APBS1_3648 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D R2APBS1_3649 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D R2APBS1_3239 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D R2APBS1_0770 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R2APBS1_3753 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D R2APBS1_0842 putative kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D R2APBS1_1056 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R2APBS1_1613 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D R2APBS1_1554 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D R2APBS1_1556 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D R2APBS1_1587 glycine dehydrogenase, decarboxylating K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D R2APBS1_0594 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_0595 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D R2APBS1_3585 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D R2APBS1_0829 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D R2APBS1_0565 cysteine synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D R2APBS1_0575 cystathionine beta-lyase/cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D R2APBS1_0643 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D R2APBS1_3678 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R2APBS1_3660 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R2APBS1_0621 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D R2APBS1_1350 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D R2APBS1_1349 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rhd00270]
D R2APBS1_0631 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R2APBS1_1504 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R2APBS1_2294 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R2APBS1_2884 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R2APBS1_0575 cystathionine beta-lyase/cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D R2APBS1_0565 cysteine synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D R2APBS1_1262 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R2APBS1_1263 cobalamin-dependent methionine synthase I K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R2APBS1_3288 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D R2APBS1_3289 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D R2APBS1_1692 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D R2APBS1_3391 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D R2APBS1_3860 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D R2APBS1_0702 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D R2APBS1_1191 cytosine deaminase-like metal-dependent hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D R2APBS1_2224 purine nucleoside phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D R2APBS1_1483 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D R2APBS1_1377 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D R2APBS1_1085 haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D R2APBS1_1375 acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D R2APBS1_1376 hypothetical protein, contains double-stranded beta-helix domain K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D R2APBS1_3581 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D R2APBS1_0260 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D R2APBS1_0423 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R2APBS1_3295 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R2APBS1_3642 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D R2APBS1_3192 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D R2APBS1_1343 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R2APBS1_0634 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R2APBS1_3647 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R2APBS1_2401 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D R2APBS1_0632 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D R2APBS1_0633 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D R2APBS1_3305 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_3652 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_3537 glutamate--cysteine ligase, plant type K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D R2APBS1_0859 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R2APBS1_2580 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R2APBS1_0621 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D R2APBS1_1541 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R2APBS1_0643 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D R2APBS1_1056 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R2APBS1_1613 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rhd00280]
D R2APBS1_3305 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_3652 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_2559 glutamate dehydrogenase/leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D R2APBS1_0531 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D R2APBS1_0530 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D R2APBS1_1276 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D R2APBS1_0529 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_2561 acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D R2APBS1_1780 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_1086 4-aminobutyrate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D R2APBS1_1230 acetyl/propionyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D R2APBS1_2565 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D R2APBS1_1231 enoyl-CoA hydratase/carnithine racemase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D R2APBS1_1229 isopropylmalate/homocitrate/citramalate synthase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D R2APBS1_0883 3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rhd00290]
D R2APBS1_3678 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R2APBS1_3660 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R2APBS1_3653 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D R2APBS1_3654 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D R2APBS1_3655 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D R2APBS1_3658 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R2APBS1_3659 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D R2APBS1_3657 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D R2APBS1_3656 dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D R2APBS1_3305 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_3652 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_2559 glutamate dehydrogenase/leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D R2APBS1_3487 aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D R2APBS1_3651 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rhd00300]
D R2APBS1_0634 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R2APBS1_3647 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R2APBS1_3192 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D R2APBS1_1343 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R2APBS1_2598 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D R2APBS1_3453 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D R2APBS1_1821 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D R2APBS1_2780 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D R2APBS1_0382 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D R2APBS1_2777 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D R2APBS1_3951 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D R2APBS1_3412 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D R2APBS1_3273 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D R2APBS1_3272 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rhd00310]
D R2APBS1_2422 NAD-dependent aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D R2APBS1_1494 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_1272 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_0621 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D R2APBS1_1086 4-aminobutyrate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rhd00220]
D R2APBS1_1203 ornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
D R2APBS1_1206 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D R2APBS1_1210 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D R2APBS1_0521 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D R2APBS1_2547 arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D R2APBS1_0079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R2APBS1_1268 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R2APBS1_3487 aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D R2APBS1_1208 N-acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8]
D R2APBS1_1209 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D R2APBS1_0382 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D R2APBS1_1207 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rhd00330]
D R2APBS1_3859 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D R2APBS1_1636 putative amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D R2APBS1_3860 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D R2APBS1_1692 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D R2APBS1_3391 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_1007 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R2APBS1_1804 glycine/D-amino acid oxidase, deaminating K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D R2APBS1_0521 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D R2APBS1_2547 arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D R2APBS1_0847 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D R2APBS1_0273 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D R2APBS1_0798 NAD-dependent aldehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D R2APBS1_1211 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D R2APBS1_1212 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D R2APBS1_1058 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D R2APBS1_3572 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D R2APBS1_0370 2OG-Fe(II) oxygenase superfamily enzyme K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:rhd00340]
D R2APBS1_1364 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D R2APBS1_1371 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D R2APBS1_1369 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D R2APBS1_1368 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D R2APBS1_1370 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D R2APBS1_1367 imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D R2APBS1_1366 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R2APBS1_0871 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D R2APBS1_1365 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D R2APBS1_1427 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D R2APBS1_2346 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D R2APBS1_2364 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D R2APBS1_2362 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D R2APBS1_1168 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_2705 putative methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:rhd00350]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R2APBS1_1366 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R2APBS1_3581 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D R2APBS1_0536 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D R2APBS1_0537 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D R2APBS1_0560 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D R2APBS1_0538 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D R2APBS1_3732 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R2APBS1_1423 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R2APBS1_3326 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rhd00360]
D R2APBS1_0035 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R2APBS1_1366 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R2APBS1_3581 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D R2APBS1_0536 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D R2APBS1_1568 glycine/D-amino acid oxidase, deaminating K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D R2APBS1_1007 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R2APBS1_1082 ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D R2APBS1_0314 NAD(P)H-nitrite reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:rhd00380]
D R2APBS1_0532 tryptophan 2,3-dioxygenase (vermilion) K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D R2APBS1_2390 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D R2APBS1_1216 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D R2APBS1_1382 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D R2APBS1_1218 putative TIM-barrel fold metal-dependent hydrolase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D R2APBS1_1171 NAD-dependent aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D R2APBS1_1169 putative translation initiation inhibitor, yjgF family K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D R2APBS1_1494 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_1272 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_1701 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D R2APBS1_1007 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R2APBS1_2636 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rhd00400]
D R2APBS1_1005 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D R2APBS1_1140 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D R2APBS1_0837 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D R2APBS1_0341 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D R2APBS1_3941 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D R2APBS1_0838 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D R2APBS1_1615 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D R2APBS1_1341 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D R2APBS1_3429 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D R2APBS1_3397 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D R2APBS1_3396 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D R2APBS1_1347 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D R2APBS1_3395 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D R2APBS1_1350 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D R2APBS1_1349 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D R2APBS1_1614 chorismate mutase, clade 2 K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R2APBS1_1366 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R2APBS1_3581 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D R2APBS1_0035 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D R2APBS1_3770 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rhd00410]
D R2APBS1_2590 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D R2APBS1_0795 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D R2APBS1_1086 4-aminobutyrate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D R2APBS1_0799 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_2591 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:rhd00430]
D R2APBS1_3025 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R2APBS1_2178 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D R2APBS1_0799 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D R2APBS1_1268 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D R2APBS1_2146 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:rhd00450]
D R2APBS1_0633 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D R2APBS1_1262 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R2APBS1_1263 cobalamin-dependent methionine synthase I K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R2APBS1_3288 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D R2APBS1_0575 cystathionine beta-lyase/cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D R2APBS1_1077 cysteine desulfurase-like protein, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D R2APBS1_2179 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D R2APBS1_2768 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D R2APBS1_0593 sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D R2APBS1_0592 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D R2APBS1_1317 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rhd00460]
D R2APBS1_0175 beta-glucosidase-like glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D R2APBS1_3923 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D R2APBS1_1701 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D R2APBS1_3025 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R2APBS1_0937 L-asparaginase/GlutRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D R2APBS1_0886 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D R2APBS1_0770 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rhd00470]
D R2APBS1_1569 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R2APBS1_3267 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D R2APBS1_0621 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D R2APBS1_3300 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D R2APBS1_3407 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D R2APBS1_3298 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D R2APBS1_3951 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D R2APBS1_3412 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D R2APBS1_3192 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D R2APBS1_1568 glycine/D-amino acid oxidase, deaminating K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rhd00480]
D R2APBS1_3025 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R2APBS1_3537 glutamate--cysteine ligase, plant type K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D R2APBS1_0859 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D R2APBS1_3242 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D R2APBS1_0411 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D R2APBS1_3680 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D R2APBS1_1506 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_2329 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_3291 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_0334 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_2494 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_3480 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_0029 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_1275 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_3613 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_1151 MAPEG family K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_1226 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_1848 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D R2APBS1_3790 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D R2APBS1_2079 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D R2APBS1_2093 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D R2APBS1_3737 isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D R2APBS1_0109 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D R2APBS1_3906 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R2APBS1_0132 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R2APBS1_2673 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D R2APBS1_1487 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D R2APBS1_3860 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rhd00511]
D R2APBS1_0168 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D R2APBS1_2222 asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D R2APBS1_0443 O-glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:rhd00540]
D R2APBS1_1031 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D R2APBS1_3263 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D R2APBS1_1033 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D R2APBS1_2614 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D R2APBS1_1030 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D R2APBS1_2365 tetraacyldisaccharide 4''-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D R2APBS1_3132 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D R2APBS1_2291 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D R2APBS1_3133 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D R2APBS1_1616 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D R2APBS1_0362 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D R2APBS1_0361 lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D R2APBS1_0231 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D R2APBS1_2602 aspartyl/asparaginyl beta-hydroxylase-like dioxygenase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D R2APBS1_1430 Mn2+-dependent serine/threonine protein kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D R2APBS1_3697 lipid A core-O-antigen ligase-like enyme K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rhd00541]
D R2APBS1_1805 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R2APBS1_3595 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R2APBS1_2150 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R2APBS1_2246 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R2APBS1_1046 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R2APBS1_2153 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R2APBS1_0573 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D R2APBS1_0574 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R2APBS1_0572 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R2APBS1_0571 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D R2APBS1_0322 2-polyprenylphenol hydroxylase-like oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D R2APBS1_0570 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D R2APBS1_1093 putative PLP-dependent enzyme possibly involved in cell wall biogenesis K13010 per; perosamine synthetase [EC:2.6.1.102]
D R2APBS1_3771 glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D R2APBS1_3055 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D R2APBS1_3317 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D R2APBS1_2152 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:rhd00550]
D R2APBS1_3130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R2APBS1_2417 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R2APBS1_3268 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D R2APBS1_3189 UDP-N-acetylmuramoylalanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D R2APBS1_3190 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D R2APBS1_3273 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D R2APBS1_3267 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D R2APBS1_3272 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D R2APBS1_1038 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D R2APBS1_0075 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R2APBS1_1740 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R2APBS1_1352 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R2APBS1_3271 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R2APBS1_3269 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D R2APBS1_0605 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D R2APBS1_3345 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R2APBS1_3165 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D R2APBS1_0181 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D R2APBS1_0398 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D R2APBS1_3274 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D R2APBS1_0402 penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:rhd00552]
D R2APBS1_0075 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R2APBS1_1740 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R2APBS1_1352 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rhd00730]
D R2APBS1_3232 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D R2APBS1_0385 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D R2APBS1_0781 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D R2APBS1_3486 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D R2APBS1_3632 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R2APBS1_0377 adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rhd00740]
D R2APBS1_0777 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D R2APBS1_0773 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D R2APBS1_0412 haloacid dehalogenase superfamily enzyme, subfamily IA K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D R2APBS1_0779 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D R2APBS1_0776 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D R2APBS1_1237 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D R2APBS1_2957 NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rhd00750]
D R2APBS1_0843 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D R2APBS1_1613 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D R2APBS1_3255 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D R2APBS1_0010 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D R2APBS1_3649 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rhd00760]
D R2APBS1_2915 aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D R2APBS1_2916 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D R2APBS1_2937 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D R2APBS1_2677 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D R2APBS1_2908 purine-nucleoside phosphorylase, DeoD family K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D R2APBS1_1270 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D R2APBS1_2283 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R2APBS1_1137 nicotinate/nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D R2APBS1_0874 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D R2APBS1_3827 Zn-finger containing NTP pyrophosphohydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D R2APBS1_0699 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D R2APBS1_2634 competence/damage-inducible protein CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D R2APBS1_0471 nicotinamidase-like amidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D R2APBS1_1269 putative sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D R2APBS1_0928 NAD/NADP transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D R2APBS1_0932 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D R2APBS1_0933 NAD/NADP transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:rhd00770]
D R2APBS1_3658 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R2APBS1_3659 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D R2APBS1_3657 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D R2APBS1_3656 dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D R2APBS1_2592 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D R2APBS1_1079 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D R2APBS1_2591 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D R2APBS1_0515 pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D R2APBS1_3853 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D R2APBS1_0874 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D R2APBS1_3028 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D R2APBS1_0905 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D R2APBS1_0011 phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D R2APBS1_3748 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D R2APBS1_3305 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_3652 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_2590 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rhd00780]
D R2APBS1_0669 methylase involved in ubiquinone/menaquinone biosynthesis K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D R2APBS1_3672 methylase involved in ubiquinone/menaquinone biosynthesis K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D R2APBS1_2913 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R2APBS1_3758 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R2APBS1_1450 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R2APBS1_1448 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_1172 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_3762 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_1032 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R2APBS1_3767 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R2APBS1_3671 carboxylesterase BioH (pimeloyl-CoA synthesis) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D R2APBS1_3669 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D R2APBS1_0869 adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D R2APBS1_0265 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D R2APBS1_3668 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D R2APBS1_0514 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rhd00785]
D R2APBS1_0404 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D R2APBS1_2297 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D R2APBS1_0405 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D R2APBS1_2764 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3483 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D R2APBS1_3455 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R2APBS1_1495 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D R2APBS1_1494 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D R2APBS1_0531 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D R2APBS1_0530 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D R2APBS1_1276 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D R2APBS1_0529 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D R2APBS1_1587 glycine dehydrogenase, decarboxylating K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D R2APBS1_0594 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R2APBS1_0595 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rhd00790]
D R2APBS1_0126 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D R2APBS1_0312 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D R2APBS1_1196 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D R2APBS1_3632 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R2APBS1_1227 ADP-ribose pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D R2APBS1_3708 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D R2APBS1_2593 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D R2APBS1_3707 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D R2APBS1_2134 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D R2APBS1_0903 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D R2APBS1_1416 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D R2APBS1_0777 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D R2APBS1_1451 anthranilate/para-aminobenzoate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D R2APBS1_1452 aminodeoxychorismate lyase apoprotein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D R2APBS1_3783 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D R2APBS1_1838 pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D R2APBS1_0035 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D R2APBS1_0232 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D R2APBS1_0722 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D R2APBS1_0723 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D R2APBS1_3616 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D R2APBS1_2905 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D R2APBS1_2901 molybdopterin converting factor, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D R2APBS1_2903 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D R2APBS1_2900 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rhd00670]
D R2APBS1_0903 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D R2APBS1_1770 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D R2APBS1_0770 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R2APBS1_3124 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D R2APBS1_0335 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R2APBS1_3694 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D R2APBS1_0594 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R2APBS1_1262 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R2APBS1_1263 cobalamin-dependent methionine synthase I K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R2APBS1_0902 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D R2APBS1_3303 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D R2APBS1_3376 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rhd00860]
D R2APBS1_1356 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R2APBS1_0949 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D R2APBS1_0384 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D R2APBS1_3540 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D R2APBS1_3913 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D R2APBS1_0326 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D R2APBS1_0835 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D R2APBS1_3755 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D R2APBS1_0539 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D R2APBS1_2525 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D R2APBS1_1045 putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D R2APBS1_2524 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D R2APBS1_3508 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D R2APBS1_0327 putative enzyme of heme biosynthesis K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D R2APBS1_1503 uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D R2APBS1_0283 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D R2APBS1_0282 uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D R2APBS1_1887 ATPase family protein associated with various cellular activities (AAA) K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D R2APBS1_3251 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D R2APBS1_3823 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D R2APBS1_0366 bacterioferritin (cytochrome b1) K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rhd00130]
D R2APBS1_3770 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D R2APBS1_3662 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D R2APBS1_3248 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D R2APBS1_1193 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D R2APBS1_3640 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D R2APBS1_3249 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D R2APBS1_3565 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D R2APBS1_3383 ubiquinone biosynthesis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D R2APBS1_0321 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D R2APBS1_0943 NAD(P)H:quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D R2APBS1_0536 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rhd00900]
D R2APBS1_3232 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D R2APBS1_1036 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D R2APBS1_2288 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D R2APBS1_0952 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D R2APBS1_2287 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D R2APBS1_2183 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D R2APBS1_1240 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_3947 mevalonate kinase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D R2APBS1_3946 mevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D R2APBS1_3945 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D R2APBS1_3948 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D R2APBS1_1020 geranylgeranyl pyrophosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D R2APBS1_0649 geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D R2APBS1_1038 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rhd00906]
D R2APBS1_1195 phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rhd00907]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D R2APBS1_0784 Zn-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D R2APBS1_0380 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K13775 atuG; citronellol/citronellal dehydrogenase
D R2APBS1_1229 isopropylmalate/homocitrate/citramalate synthase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D R2APBS1_1780 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D R2APBS1_0557 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D R2APBS1_3911 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rhd00523]
D R2APBS1_0573 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D R2APBS1_0574 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R2APBS1_0572 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R2APBS1_0571 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D R2APBS1_0577 nucleoside-diphosphate-sugar epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D R2APBS1_0574 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rhd00946]
D R2APBS1_0175 beta-glucosidase-like glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D R2APBS1_3923 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D R2APBS1_2767 penicilin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:rhd00332]
D R2APBS1_1211 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D R2APBS1_1212 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rhd00261]
D R2APBS1_0593 sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D R2APBS1_0592 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D R2APBS1_3192 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D R2APBS1_1343 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R2APBS1_2598 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D R2APBS1_3453 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D R2APBS1_1821 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rhd00521]
D R2APBS1_3541 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_0166 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_3910 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R2APBS1_0585 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3851 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D R2APBS1_3119 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D R2APBS1_0573 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D R2APBS1_0574 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R2APBS1_0572 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R2APBS1_0571 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D R2APBS1_3541 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R2APBS1_0166 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rhd00525]
D R2APBS1_3641 3-dehydroquinate synthetase K19969 acbC; 2-epi-5-epi-valiolone synthase [EC:4.2.3.152]
D R2APBS1_0573 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D R2APBS1_0574 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rhd00401]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R2APBS1_1366 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R2APBS1_3581 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
D R2APBS1_3097 Tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D R2APBS1_3429 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D R2APBS1_3397 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D R2APBS1_1447 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D R2APBS1_1448 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_1172 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_3762 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D R2APBS1_1449 acyl carrier protein K02078 acpP; acyl carrier protein
D R2APBS1_1089 acyl carrier protein K02078 acpP; acyl carrier protein
D R2APBS1_3769 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rhd00999]
D R2APBS1_3289 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D R2APBS1_3941 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D R2APBS1_0175 beta-glucosidase-like glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D R2APBS1_3923 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rhd00362]
D R2APBS1_1780 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D R2APBS1_0801 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D R2APBS1_1171 NAD-dependent aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D R2APBS1_1779 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R2APBS1_1272 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rhd00627]
D R2APBS1_1007 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R2APBS1_1701 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D R2APBS1_0946 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation [PATH:rhd00364]
D R2APBS1_1329 dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rhd00625]
D R2APBS1_1423 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R2APBS1_3732 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R2APBS1_0097 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R2APBS1_1319 haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D R2APBS1_3799 2-haloalkanoic acid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rhd00361]
D R2APBS1_1329 dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D R2APBS1_1319 haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D R2APBS1_3799 2-haloalkanoic acid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:rhd00623]
D R2APBS1_1329 dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D R2APBS1_1171 NAD-dependent aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D R2APBS1_1780 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rhd00643]
D R2APBS1_0537 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D R2APBS1_0560 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D R2APBS1_0538 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D R2APBS1_1007 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R2APBS1_1701 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D R2APBS1_0797 acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D R2APBS1_0796 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:rhd00930]
D R2APBS1_2243 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D R2APBS1_1411 cupin domain-containing protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rhd00626]
D R2APBS1_1423 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R2APBS1_3732 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rhd03020]
D R2APBS1_0971 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D R2APBS1_0972 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R2APBS1_1002 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R2APBS1_3353 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rhd03010]
D R2APBS1_1811 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D R2APBS1_1042 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D R2APBS1_0984 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D R2APBS1_1001 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D R2APBS1_0995 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D R2APBS1_1177 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D R2APBS1_0974 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D R2APBS1_0992 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D R2APBS1_3381 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D R2APBS1_0977 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D R2APBS1_1000 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D R2APBS1_0973 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D R2APBS1_0999 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D R2APBS1_0991 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D R2APBS1_1479 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D R2APBS1_1184 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D R2APBS1_0987 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D R2APBS1_1178 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D R2APBS1_0982 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D R2APBS1_1235 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D R2APBS1_0293 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D R2APBS1_0968 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D R2APBS1_0981 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D R2APBS1_0978 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D R2APBS1_0979 50S ribosomal protein L4, bacterial/organelle K02926 RP-L4; large subunit ribosomal protein L4
D R2APBS1_0990 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D R2APBS1_0993 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D R2APBS1_0970 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D R2APBS1_1179 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D R2APBS1_0969 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D R2APBS1_0967 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D R2APBS1_3382 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D R2APBS1_0988 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D R2APBS1_0997 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D R2APBS1_0985 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D R2APBS1_1003 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D R2APBS1_0994 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D R2APBS1_1187 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D R2APBS1_1050 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D R2APBS1_2572 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D R2APBS1_0983 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D R2APBS1_0980 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D R2APBS1_0989 ribosomal protein L24, bacterial/organelle K02895 RP-L24; large subunit ribosomal protein L24
D R2APBS1_0955 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D R2APBS1_2571 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D R2APBS1_3548 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D R2APBS1_0986 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D R2APBS1_0996 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D R2APBS1_3348 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D R2APBS1_1445 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D R2APBS1_3549 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D R2APBS1_3962 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D R2APBS1_1049 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D R2APBS1_1816 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D R2APBS1_0388 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D R2APBS1_3842 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D R2APBS1_3839 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D R2APBS1_0391 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D R2APBS1_0392 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D R2APBS1_3838 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rhd00970]
D R2APBS1_2249 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D R2APBS1_2413 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D R2APBS1_0390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D R2APBS1_3840 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D R2APBS1_2273 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D R2APBS1_2275 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D R2APBS1_2423 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D R2APBS1_3624 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D R2APBS1_2925 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D R2APBS1_2251 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D R2APBS1_2263 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D R2APBS1_1621 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D R2APBS1_3380 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D R2APBS1_0953 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D R2APBS1_2250 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D R2APBS1_2595 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D R2APBS1_1619 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R2APBS1_1620 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R2APBS1_3312 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R2APBS1_0961 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R2APBS1_2272 tRNA-His K14226 tRNA-His; tRNA His
D R2APBS1_0389 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D R2APBS1_3841 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D R2APBS1_1593 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_2127 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_2403 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_1634 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_2270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_0724 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D R2APBS1_2271 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D R2APBS1_3820 tRNA-Met K14230 tRNA-Met; tRNA Met
D R2APBS1_1473 tRNA-Met K14230 tRNA-Met; tRNA Met
D R2APBS1_0222 tRNA-Met K14230 tRNA-Met; tRNA Met
D R2APBS1_3034 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D R2APBS1_1425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D R2APBS1_1055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D R2APBS1_2274 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D R2APBS1_2629 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D R2APBS1_2256 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D R2APBS1_1432 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D R2APBS1_2162 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D R2APBS1_0517 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D R2APBS1_0962 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D R2APBS1_1241 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D R2APBS1_0964 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D R2APBS1_0960 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D R2APBS1_2264 tRNA-Val K14237 tRNA-Val; tRNA Val
D R2APBS1_2783 tRNA-Val K14237 tRNA-Val; tRNA Val
D R2APBS1_1260 tRNA-Val K14237 tRNA-Val; tRNA Val
D R2APBS1_1356 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R2APBS1_0734 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D R2APBS1_2631 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R2APBS1_0708 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R2APBS1_1175 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D R2APBS1_3834 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R2APBS1_3833 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R2APBS1_1047 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R2APBS1_2164 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R2APBS1_1201 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R2APBS1_1317 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R2APBS1_3694 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D R2APBS1_0833 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R2APBS1_1134 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R2APBS1_1238 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D R2APBS1_1671 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D R2APBS1_3855 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R2APBS1_0827 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R2APBS1_1426 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D R2APBS1_1051 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R2APBS1_1052 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R2APBS1_3843 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D R2APBS1_0522 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rhd03060]
D R2APBS1_0998 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D R2APBS1_0965 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D R2APBS1_2128 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D R2APBS1_1069 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD
D R2APBS1_1070 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D R2APBS1_1068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D R2APBS1_3960 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R2APBS1_3260 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R2APBS1_3547 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D R2APBS1_1183 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R2APBS1_1433 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D R2APBS1_3030 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R2APBS1_2776 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D R2APBS1_3506 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D R2APBS1_3505 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D R2APBS1_3504 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D R2APBS1_2236 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D R2APBS1_1239 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rhd04122]
D R2APBS1_2580 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R2APBS1_1606 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D R2APBS1_2901 molybdopterin converting factor, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D R2APBS1_2905 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D R2APBS1_2902 hypothetical protein K03636 moaD; sulfur-carrier protein
D R2APBS1_2907 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rhd03018]
D R2APBS1_3821 NTP pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D R2APBS1_1840 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D R2APBS1_3534 DNA/RNA helicase, superfamily II K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D R2APBS1_2290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R2APBS1_1480 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D R2APBS1_1159 DNA/RNA helicase, superfamily II K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D R2APBS1_1594 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D R2APBS1_1157 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D R2APBS1_3112 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R2APBS1_3536 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D R2APBS1_1823 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D R2APBS1_0347 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R2APBS1_1560 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D R2APBS1_2415 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R2APBS1_2611 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R2APBS1_0947 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D R2APBS1_2594 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rhd03030]
D R2APBS1_2257 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R2APBS1_1026 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R2APBS1_1434 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R2APBS1_1455 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R2APBS1_1136 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R2APBS1_3243 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R2APBS1_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R2APBS1_1180 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D R2APBS1_0289 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D R2APBS1_0652 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1930 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_2003 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_2258 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D R2APBS1_1029 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D R2APBS1_0332 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R2APBS1_3523 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_2141 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rhd03410]
D R2APBS1_1314 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D R2APBS1_3530 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D R2APBS1_3032 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D R2APBS1_2741 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D R2APBS1_3555 formamidopyrimidine-DNA glycosylase Fpg K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D R2APBS1_1798 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D R2APBS1_2351 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D R2APBS1_3675 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D R2APBS1_1010 G:T/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D R2APBS1_3935 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D R2APBS1_3848 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D R2APBS1_0332 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R2APBS1_1916 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_1641 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_1646 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_3523 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_2141 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rhd03420]
D R2APBS1_1278 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D R2APBS1_2574 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D R2APBS1_2784 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D R2APBS1_1617 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D R2APBS1_0330 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R2APBS1_2001 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R2APBS1_0332 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R2APBS1_3523 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_2141 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rhd03430]
D R2APBS1_2635 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D R2APBS1_2585 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D R2APBS1_0330 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R2APBS1_2001 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R2APBS1_2136 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D R2APBS1_2193 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D R2APBS1_1021 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D R2APBS1_1916 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_1641 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_1646 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_0652 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1930 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_2003 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1026 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R2APBS1_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R2APBS1_1434 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R2APBS1_1136 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R2APBS1_1455 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R2APBS1_2257 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R2APBS1_3243 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R2APBS1_3523 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_2141 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_2344 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R2APBS1_2866 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rhd03440]
D R2APBS1_1916 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_1641 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_1646 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_0652 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1930 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_2003 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D R2APBS1_2232 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D R2APBS1_1436 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D R2APBS1_2633 protein RecA K03553 recA; recombination protein RecA
D R2APBS1_0332 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R2APBS1_0712 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D R2APBS1_0714 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D R2APBS1_0711 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D R2APBS1_1911 RecG-like helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R2APBS1_3350 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R2APBS1_1250 ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D R2APBS1_1251 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D R2APBS1_1249 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D R2APBS1_1026 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R2APBS1_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R2APBS1_1434 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R2APBS1_1136 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R2APBS1_1455 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R2APBS1_2257 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R2APBS1_3243 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R2APBS1_3503 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D R2APBS1_0679 DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rhd03250]
D R2APBS1_2613 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rhd02010]
D R2APBS1_2888 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D R2APBS1_2889 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D R2APBS1_2890 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D R2APBS1_2474 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D R2APBS1_2473 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D R2APBS1_3922 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R2APBS1_3356 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D R2APBS1_3357 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D R2APBS1_3358 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D R2APBS1_3355 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein
D R2APBS1_3359 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D R2APBS1_1602 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D R2APBS1_0413 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D R2APBS1_1601 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D R2APBS1_1600 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D R2APBS1_1599 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D R2APBS1_1332 phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R2APBS1_2676 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D R2APBS1_2675 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D R2APBS1_2674 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D R2APBS1_0583 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D R2APBS1_0582 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D R2APBS1_0310 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D R2APBS1_0309 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D R2APBS1_2371 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D R2APBS1_2370 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D R2APBS1_2395 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D R2APBS1_2394 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D R2APBS1_2393 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D R2APBS1_2392 heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D R2APBS1_3241 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D R2APBS1_3240 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D R2APBS1_3136 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D R2APBS1_2774 ABC-type transport system involved in multi-copper enzyme maturation, permease component K19341 nosY; Cu-processing system permease protein
D R2APBS1_2773 ABC-type multidrug transport system, ATPase component K19340 nosF; Cu-processing system ATP-binding protein
D R2APBS1_3532 cell division protein K09811 ftsX; cell division transport system permease protein
D R2APBS1_3533 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R2APBS1_2366 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D R2APBS1_3179 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D R2APBS1_1405 ABC-type multidrug transport system, ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:rhd02060]
D R2APBS1_3143 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D R2APBS1_3142 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr
D R2APBS1_3141 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 03070 Bacterial secretion system [PATH:rhd03070]
D R2APBS1_0363 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D R2APBS1_3717 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D R2APBS1_3726 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D R2APBS1_3725 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D R2APBS1_3724 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D R2APBS1_3723 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D R2APBS1_3722 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D R2APBS1_3721 type II secretory pathway, component PulK K02460 gspK; general secretion pathway protein K
D R2APBS1_3720 Tfp pilus assembly protein PilN K02461 gspL; general secretion pathway protein L
D R2APBS1_3719 Tfp pilus assembly protein PilO K02462 gspM; general secretion pathway protein M
D R2APBS1_3835 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D R2APBS1_3727 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D R2APBS1_1069 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD
D R2APBS1_1070 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D R2APBS1_0965 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D R2APBS1_2128 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D R2APBS1_0998 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D R2APBS1_1068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D R2APBS1_3960 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R2APBS1_3260 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R2APBS1_3030 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R2APBS1_3547 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D R2APBS1_1183 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R2APBS1_2776 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D R2APBS1_3506 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D R2APBS1_3505 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D R2APBS1_3504 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rhd02020]
D R2APBS1_2610 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R2APBS1_2609 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D R2APBS1_3632 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R2APBS1_1602 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D R2APBS1_0413 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D R2APBS1_0511 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D R2APBS1_0510 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP
D R2APBS1_2238 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107]
D R2APBS1_3746 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D R2APBS1_3331 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D R2APBS1_3745 cation/multidrug efflux pump K07788 mdtB; multidrug efflux pump
D R2APBS1_0142 cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump
D R2APBS1_0143 cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump
D R2APBS1_3744 cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump
D R2APBS1_1720 RND family efflux transporter, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D R2APBS1_1294 RND family efflux transporter, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D R2APBS1_1721 heavy metal efflux pump, cobalt-zinc-cadmium K07787 cusA; copper/silver efflux system protein
D R2APBS1_1295 heavy metal efflux pump, cobalt-zinc-cadmium K07787 cusA; copper/silver efflux system protein
D R2APBS1_0186 signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D R2APBS1_0187 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07666 qseB; two-component system, OmpR family, response regulator QseB
D R2APBS1_3004 flagellin/flagellar hook associated protein K02406 fliC; flagellin
D R2APBS1_2980 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D R2APBS1_2976 flagellar motor component K02556 motA; chemotaxis protein MotA
D R2APBS1_0282 uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D R2APBS1_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R2APBS1_3431 signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D R2APBS1_3415 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R2APBS1_0115 Histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D R2APBS1_0114 response regulator of the LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR
D R2APBS1_0309 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D R2APBS1_0310 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D R2APBS1_2898 respiratory nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2897 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2895 respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2896 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D R2APBS1_1828 signal transduction histidine kinase, glucose-6-phosphate specific K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D R2APBS1_1827 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K20264 fusR; two-component system, NarL family, response regulator FusR
D R2APBS1_2125 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D R2APBS1_2630 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D R2APBS1_1942 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D R2APBS1_1993 carbon storage regulator (could also regulate swarming and quorum sensing) K03563 csrA; carbon storage regulator
D R2APBS1_0599 penicillin-binding protein, beta-lactamase class C K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D R2APBS1_1064 signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D R2APBS1_1065 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07693 desR; two-component system, NarL family, response regulator DesR
D R2APBS1_0300 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D R2APBS1_0303 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D R2APBS1_0302 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein
D R2APBS1_0301 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein
D R2APBS1_1044 (protein-PII) uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D R2APBS1_0077 nitrogen regulatory protein PII K04751 glnB; nitrogen regulatory protein P-II 1
D R2APBS1_1738 nitrogen regulatory protein PII K04751 glnB; nitrogen regulatory protein P-II 1
D R2APBS1_0105 signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D R2APBS1_0106 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D R2APBS1_0079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R2APBS1_3321 short chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_0696 signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D R2APBS1_0690 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR
D R2APBS1_3137 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D R2APBS1_0922 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D R2APBS1_0923 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D R2APBS1_2964 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D R2APBS1_3017 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2961 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2967 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2923 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D R2APBS1_2966 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D R2APBS1_2974 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D R2APBS1_2968 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2977 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2969 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R2APBS1_2979 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R2APBS1_2962 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D R2APBS1_3016 chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D R2APBS1_0863 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D R2APBS1_0862 chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI
D R2APBS1_0864 chemotaxis protein histidine kinase-like protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D R2APBS1_0860 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG
D R2APBS1_1490 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D R2APBS1_0861 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D R2APBS1_0865 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D R2APBS1_0866 chemotaxis signal transduction protein K06598 chpC; chemosensory pili system protein ChpC
D R2APBS1_2999 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D R2APBS1_3392 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R2APBS1_0891 signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D R2APBS1_0890 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein K15012 regA; two-component system, response regulator RegA
D R2APBS1_2943 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D R2APBS1_2942 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D R2APBS1_2941 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D R2APBS1_2184 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D R2APBS1_1694 Cbb3-type cytochrome oxidase, subunit 1 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D R2APBS1_2185 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D R2APBS1_1695 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D R2APBS1_2186 Cbb3-type cytochrome oxidase component FixQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D R2APBS1_2187 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D R2APBS1_1700 cytochrome bd-type quinol oxidase, subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D R2APBS1_3369 cytochrome bd-type quinol oxidase, subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D R2APBS1_1699 cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D R2APBS1_3370 cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D R2APBS1_3371 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D R2APBS1_0363 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D R2APBS1_3086 periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein
D R2APBS1_2151 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D R2APBS1_3055 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D R2APBS1_2960 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D R2APBS1_3019 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rhd04148]
D R2APBS1_0521 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D R2APBS1_2547 arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D R2APBS1_2943 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rhd02024]
D R2APBS1_3642 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D R2APBS1_1560 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D R2APBS1_3429 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D R2APBS1_3397 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D R2APBS1_0589 putative glycosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D R2APBS1_0915 putative glycosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D R2APBS1_1005 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D R2APBS1_1140 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D R2APBS1_0186 signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D R2APBS1_0187 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07666 qseB; two-component system, OmpR family, response regulator QseB
D R2APBS1_1828 signal transduction histidine kinase, glucose-6-phosphate specific K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D R2APBS1_1827 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K20264 fusR; two-component system, NarL family, response regulator FusR
D R2APBS1_0223 putative autotransporter protein,putative Ig domain-containing protein K20276 bapA; large repetitive protein
D R2APBS1_1526 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R2APBS1_3392 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R2APBS1_1358 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D R2APBS1_0773 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D R2APBS1_3960 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R2APBS1_0965 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D R2APBS1_2128 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D R2APBS1_0998 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D R2APBS1_1068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D R2APBS1_3260 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R2APBS1_3030 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R2APBS1_3547 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D R2APBS1_1183 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rhd02030]
D R2APBS1_3017 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2961 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2967 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2923 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D R2APBS1_2968 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2977 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2966 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D R2APBS1_2974 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D R2APBS1_2969 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R2APBS1_2979 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R2APBS1_2978 chemotaxis protein K03414 cheZ; chemotaxis protein CheZ
D R2APBS1_2962 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D R2APBS1_3016 chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D R2APBS1_2963 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D R2APBS1_2964 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D R2APBS1_2996 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D R2APBS1_2990 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D R2APBS1_2989 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R2APBS1_2976 flagellar motor component K02556 motA; chemotaxis protein MotA
D R2APBS1_2975 flagellar motor protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rhd02040]
D R2APBS1_2998 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D R2APBS1_2997 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF
D R2APBS1_2996 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D R2APBS1_2995 flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH
D R2APBS1_2994 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D R2APBS1_2993 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D R2APBS1_2992 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D R2APBS1_2991 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL
D R2APBS1_2990 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D R2APBS1_2989 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R2APBS1_2988 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D R2APBS1_2987 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D R2APBS1_2986 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D R2APBS1_2985 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D R2APBS1_2983 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D R2APBS1_2984 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D R2APBS1_3018 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D R2APBS1_3015 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D R2APBS1_3014 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D R2APBS1_3013 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D R2APBS1_3012 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D R2APBS1_3011 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D R2APBS1_3010 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D R2APBS1_3009 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D R2APBS1_3008 flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D R2APBS1_3007 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D R2APBS1_3006 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D R2APBS1_3005 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D R2APBS1_3004 flagellin/flagellar hook associated protein K02406 fliC; flagellin
D R2APBS1_3003 flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D R2APBS1_3002 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D R2APBS1_3001 hypothetical protein K02423 fliT; flagellar protein FliT
D R2APBS1_2976 flagellar motor component K02556 motA; chemotaxis protein MotA
D R2APBS1_2975 flagellar motor protein K02557 motB; chemotaxis protein MotB
D R2APBS1_3019 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D R2APBS1_3020 flagellar biosynthesis/type III secretory pathway chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D R2APBS1_0229 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D R2APBS1_2999 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D R2APBS1_3137 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D R2APBS1_2980 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D R2APBS1_2290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rhd04980]
D R2APBS1_3251 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D R2APBS1_1262 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R2APBS1_1263 cobalamin-dependent methionine synthase I K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rhd01501]
D R2APBS1_3847 Major Facilitator Superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D R2APBS1_2226 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D R2APBS1_1688 transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D R2APBS1_0599 penicillin-binding protein, beta-lactamase class C K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D R2APBS1_1164 TonB family protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_0885 antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_3611 antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_0884 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D R2APBS1_1165 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D R2APBS1_1267 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R2APBS1_1266 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump
D R2APBS1_0363 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D R2APBS1_3345 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R2APBS1_0398 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D R2APBS1_3274 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D R2APBS1_1802 Zn-dependent hydrolase, glyoxylase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:rhd01502]
D R2APBS1_3415 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R2APBS1_3267 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D R2APBS1_1569 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R2APBS1_3272 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D R2APBS1_3271 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R2APBS1_3269 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rhd01503]
D R2APBS1_0511 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D R2APBS1_0510 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP
D R2APBS1_0584 putative lipoprotein NlpE involved in copper resistance K06079 cutF; copper homeostasis protein (lipoprotein)
D R2APBS1_2586 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R2APBS1_2238 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107]
D R2APBS1_0255 protein-disulfide isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D R2APBS1_0256 protein-disulfide isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D R2APBS1_2613 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D R2APBS1_1267 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R2APBS1_1266 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump
D R2APBS1_0363 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D R2APBS1_1031 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rhd01000]
C 01001 Protein kinases [BR:rhd01001]
D R2APBS1_2437 serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D R2APBS1_3041 transcriptional regulatory protein,protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D R2APBS1_2647 TIR-like domain-containing protein (DUF1863) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D R2APBS1_3387 protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D R2APBS1_3090 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D R2APBS1_3741 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D R2APBS1_3084 ATPase involved in chromosome partitioning K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D R2APBS1_2610 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R2APBS1_0511 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D R2APBS1_0186 signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D R2APBS1_3431 signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D R2APBS1_2801 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D R2APBS1_1828 signal transduction histidine kinase, glucose-6-phosphate specific K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D R2APBS1_1064 signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D R2APBS1_0115 Histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D R2APBS1_0105 signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D R2APBS1_0696 signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D R2APBS1_2968 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2977 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_0864 chemotaxis protein histidine kinase-like protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D R2APBS1_0891 signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rhd01009]
D R2APBS1_3295 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R2APBS1_2655 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
D R2APBS1_2255 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rhd01002]
D R2APBS1_1239 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D R2APBS1_0906 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D R2APBS1_3836 GMP synthase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R2APBS1_1768 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R2APBS1_3179 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D R2APBS1_1419 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D R2APBS1_3526 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D R2APBS1_0566 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R2APBS1_0134 putative phosphosugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R2APBS1_3076 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R2APBS1_1668 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R2APBS1_0430 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R2APBS1_0461 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D R2APBS1_0619 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D R2APBS1_0240 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D R2APBS1_1083 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D R2APBS1_1150 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D R2APBS1_3576 aminopeptidase N K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
D R2APBS1_3680 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D R2APBS1_3937 Zn-dependent oligopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D R2APBS1_0267 Zn-dependent oligopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D R2APBS1_0453 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D R2APBS1_0936 Zinc metalloprotease (elastase) K08604 hap; vibriolysin [EC:3.4.24.25]
D R2APBS1_3186 putative metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D R2APBS1_1080 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D R2APBS1_1115 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D R2APBS1_3415 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R2APBS1_3172 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D R2APBS1_0147 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D R2APBS1_0146 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D R2APBS1_3587 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D R2APBS1_3242 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D R2APBS1_0411 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D R2APBS1_3413 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D R2APBS1_2777 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D R2APBS1_1043 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D R2APBS1_3367 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D R2APBS1_2293 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D R2APBS1_3372 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D R2APBS1_2448 putative aminopeptidase K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21]
D R2APBS1_2276 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D R2APBS1_2656 Heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D R2APBS1_2608 putative Zn-dependent protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D R2APBS1_1035 site-2 protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D R2APBS1_1164 TonB family protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_0885 antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_3611 antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_0512 hypothetical protein K09933 mtfA; MtfA peptidase
D R2APBS1_0792 L-aminopeptidase DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D R2APBS1_2238 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107]
D R2APBS1_2944 trypsin-like serine protease with C-terminal PDZ domain K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D R2APBS1_0414 periplasmic serine protease, Do/DeqQ family K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D R2APBS1_3384 subtilisin-like serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D R2APBS1_0371 serine protease, S9A family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D R2APBS1_0121 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D R2APBS1_0402 penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R2APBS1_2268 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D R2APBS1_2266 ATP-dependent proteinase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D R2APBS1_1874 SOS response transcriptional repressor, RecA-mediated autopeptidase K01356 lexA; repressor LexA [EC:3.4.21.88]
D R2APBS1_1679 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D R2APBS1_1656 SOS response UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D R2APBS1_2236 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D R2APBS1_1058 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D R2APBS1_3572 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D R2APBS1_3528 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D R2APBS1_0406 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D R2APBS1_2767 penicilin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D R2APBS1_1910 ClpP class periplasmic serine protease K04773 sppA; protease IV [EC:3.4.21.-]
D R2APBS1_3500 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D R2APBS1_1112 putative membrane protein K07059 K07059; rhomboid family protein
D R2APBS1_0778 murein tetrapeptidase LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D R2APBS1_1626 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D R2APBS1_3955 HslV component of HslUV peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D R2APBS1_0886 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D R2APBS1_3025 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R2APBS1_1018 microcin-processing peptidase 1 K03592 pmbA; PmbA protein
D R2APBS1_1014 microcin-processing peptidase 2 K03568 tldD; TldD protein
D R2APBS1_0179 large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin
D R2APBS1_1563 membrane protease subunit, stomatin/prohibitin K04087 hflC; modulator of FtsH protease HflC
D R2APBS1_1562 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rhd01003]
D R2APBS1_0920 hypothetical protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D R2APBS1_0921 hypothetical protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D R2APBS1_0913 glycosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D R2APBS1_3175 glycosyltransferase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D R2APBS1_0605 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D R2APBS1_0181 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D R2APBS1_3165 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D R2APBS1_3345 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R2APBS1_3871 cellobiose phosphorylase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D R2APBS1_0916 putative glycosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rhd01005]
D R2APBS1_1031 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D R2APBS1_1030 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D R2APBS1_3263 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D R2APBS1_1033 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D R2APBS1_2614 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D R2APBS1_2365 tetraacyldisaccharide 4''-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D R2APBS1_0361 lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D R2APBS1_0231 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D R2APBS1_2602 aspartyl/asparaginyl beta-hydroxylase-like dioxygenase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D R2APBS1_0362 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D R2APBS1_1430 Mn2+-dependent serine/threonine protein kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D R2APBS1_2291 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D R2APBS1_1616 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D R2APBS1_3133 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D R2APBS1_3132 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D R2APBS1_3697 lipid A core-O-antigen ligase-like enyme K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D R2APBS1_1429 ADP-heptose:LPS heptosyltransferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D R2APBS1_0589 putative glycosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D R2APBS1_0915 putative glycosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D R2APBS1_2036 glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhd01011]
D R2APBS1_3130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R2APBS1_2417 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R2APBS1_3268 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D R2APBS1_3273 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D R2APBS1_3267 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D R2APBS1_1569 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R2APBS1_0778 murein tetrapeptidase LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D R2APBS1_3271 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R2APBS1_3269 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D R2APBS1_0075 putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R2APBS1_1740 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R2APBS1_1352 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R2APBS1_1236 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D R2APBS1_3345 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R2APBS1_3165 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D R2APBS1_0181 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D R2APBS1_0398 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D R2APBS1_3274 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D R2APBS1_0402 penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R2APBS1_0605 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D R2APBS1_0461 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D R2APBS1_3415 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R2APBS1_0251 soluble lytic murein transglycosylase-like protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D R2APBS1_0400 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D R2APBS1_2261 LysM repeat-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D R2APBS1_1336 soluble lytic murein transglycosylase-like protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D R2APBS1_1453 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D R2APBS1_0401 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D R2APBS1_2586 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rhd01004]
D R2APBS1_1447 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D R2APBS1_1446 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D R2APBS1_2913 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R2APBS1_3758 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R2APBS1_1450 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R2APBS1_1448 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_1172 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_3762 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R2APBS1_2914 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D R2APBS1_1032 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R2APBS1_3767 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R2APBS1_2220 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D R2APBS1_0880 lysophospholipase L1-like esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D R2APBS1_2716 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D R2APBS1_3550 fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D R2APBS1_0203 fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D R2APBS1_0014 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R2APBS1_1542 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D R2APBS1_1526 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R2APBS1_0018 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D R2APBS1_3563 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
C 01008 Polyketide biosynthesis proteins [BR:rhd01008]
C 01006 Prenyltransferases [BR:rhd01006]
D R2APBS1_1020 geranylgeranyl pyrophosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D R2APBS1_0649 geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D R2APBS1_1038 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D R2APBS1_1195 phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D R2APBS1_1559 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D R2APBS1_3662 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D R2APBS1_0283 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rhd01007]
D R2APBS1_1356 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R2APBS1_0734 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D R2APBS1_2657 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D R2APBS1_3843 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D R2APBS1_0522 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D R2APBS1_1201 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R2APBS1_3855 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R2APBS1_1317 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R2APBS1_1238 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D R2APBS1_0833 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R2APBS1_1134 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R2APBS1_1671 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D R2APBS1_0708 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R2APBS1_1175 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D R2APBS1_1426 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D R2APBS1_3834 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R2APBS1_3833 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R2APBS1_2164 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R2APBS1_0827 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R2APBS1_1047 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R2APBS1_2631 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R2APBS1_1051 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R2APBS1_1052 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R2APBS1_1540 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R2APBS1_3487 aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D R2APBS1_3581 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D R2APBS1_1519 aspartate/tyrosine/aromatic aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D R2APBS1_1366 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R2APBS1_1554 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D R2APBS1_3669 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D R2APBS1_0382 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D R2APBS1_1086 4-aminobutyrate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D R2APBS1_0795 4-aminobutyrate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D R2APBS1_0869 adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D R2APBS1_0384 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D R2APBS1_3305 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_3652 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R2APBS1_1613 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D R2APBS1_1093 putative PLP-dependent enzyme possibly involved in cell wall biogenesis K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rhd00194]
D R2APBS1_3773 ATP synthase, F1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D R2APBS1_3774 ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D R2APBS1_3775 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D R2APBS1_3776 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D R2APBS1_3777 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D R2APBS1_3778 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D R2APBS1_3779 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D R2APBS1_3780 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rhd03000]
D R2APBS1_0423 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R2APBS1_1691 DNA-binding domain-containing protein, AraC-type K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D R2APBS1_1795 O-6-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D R2APBS1_2351 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D R2APBS1_2693 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R2APBS1_0374 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R2APBS1_3733 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R2APBS1_0741 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D R2APBS1_1529 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D R2APBS1_1502 transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D R2APBS1_1688 transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D R2APBS1_0074 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D R2APBS1_3422 transcriptional regulator of sugar metabolism K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D R2APBS1_3926 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D R2APBS1_0164 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D R2APBS1_0133 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D R2APBS1_1413 transcriptional regulator with HTH domain and aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D R2APBS1_2951 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D R2APBS1_0365 transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D R2APBS1_0036 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R2APBS1_1567 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R2APBS1_2757 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R2APBS1_3570 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R2APBS1_2055 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D R2APBS1_2117 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D R2APBS1_3332 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D R2APBS1_2384 transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D R2APBS1_2488 transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D R2APBS1_2470 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D R2APBS1_1725 putative transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R2APBS1_1862 Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R2APBS1_2065 Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R2APBS1_2107 Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R2APBS1_3784 Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R2APBS1_2096 mercuric resistance transcriptional repressor protein MerD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R2APBS1_1851 mercuric resistance transcriptional repressor protein MerD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R2APBS1_2076 mercuric resistance transcriptional repressor protein MerD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R2APBS1_1414 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D R2APBS1_3791 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D R2APBS1_1743 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D R2APBS1_1829 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D R2APBS1_1358 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D R2APBS1_0800 beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D R2APBS1_3392 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R2APBS1_0540 cAMP-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D R2APBS1_2877 cAMP-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D R2APBS1_2922 cAMP-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D R2APBS1_1410 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D R2APBS1_1729 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D R2APBS1_0160 putative transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D R2APBS1_3665 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D R2APBS1_1311 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D R2APBS1_0884 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D R2APBS1_1165 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D R2APBS1_0514 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D R2APBS1_0336 Factor for inversion stimulation Fis, transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D R2APBS1_2807 putative transcriptional regulator K07724 ner; Ner family transcriptional regulator
D R2APBS1_2999 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D R2APBS1_1256 putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D R2APBS1_1485 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D R2APBS1_0306 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D R2APBS1_0273 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D R2APBS1_2770 regulator of nitric oxide reductase transcription K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D R2APBS1_1674 transcriptional regulator, BolA protein family K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D R2APBS1_3920 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R2APBS1_1949 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R2APBS1_1919 PRTRC system ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R2APBS1_1825 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D R2APBS1_2599 glycine cleavage system regulatory protein K03567 gcvR; glycine cleavage system transcriptional repressor
D R2APBS1_3664 putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D R2APBS1_2142 transcription elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D R2APBS1_2618 putative transcriptional regulator K07733 alpA; prophage regulatory protein
D R2APBS1_1204 transcriptional regulator K07734 paiB; transcriptional regulator
D R2APBS1_0857 putative transcriptional regulator K07735 algH; putative transcriptional regulator
D R2APBS1_0103 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D R2APBS1_1198 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D R2APBS1_0772 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D R2APBS1_3277 mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rhd03021]
D R2APBS1_1002 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R2APBS1_0971 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D R2APBS1_0972 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R2APBS1_3353 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D R2APBS1_0229 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D R2APBS1_2240 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R2APBS1_1124 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R2APBS1_0611 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R2APBS1_0127 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R2APBS1_3451 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R2APBS1_3529 alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D R2APBS1_3137 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D R2APBS1_2980 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D R2APBS1_1114 DNA/RNA helicase, superfamily II, SNF2 family K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D R2APBS1_1475 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D R2APBS1_0780 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D R2APBS1_0966 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D R2APBS1_2940 glutathione S-transferase K03599 sspA; stringent starvation protein A
D R2APBS1_2939 stringent starvation protein B K03600 sspB; stringent starvation protein B
D R2APBS1_0958 serine phosphatase RsbU, regulator of sigma subunit K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D R2APBS1_2239 negative regulator of sigma E activity K03597 rseA; sigma-E factor negative regulatory protein RseA
D R2APBS1_0103 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D R2APBS1_1198 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D R2APBS1_1817 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D R2APBS1_1333 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D R2APBS1_3536 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rhd03019]
D R2APBS1_1840 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D R2APBS1_1012 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D R2APBS1_2234 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R2APBS1_1594 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D R2APBS1_1390 guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D R2APBS1_2135 oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D R2APBS1_3534 DNA/RNA helicase, superfamily II K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D R2APBS1_1159 DNA/RNA helicase, superfamily II K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D R2APBS1_1157 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D R2APBS1_3112 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R2APBS1_2290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R2APBS1_1480 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D R2APBS1_3536 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D R2APBS1_1823 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D R2APBS1_0347 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R2APBS1_1560 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D R2APBS1_2415 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R2APBS1_2611 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R2APBS1_0947 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D R2APBS1_2594 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D R2APBS1_3821 NTP pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D R2APBS1_2630 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D R2APBS1_1942 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D R2APBS1_1993 carbon storage regulator (could also regulate swarming and quorum sensing) K03563 csrA; carbon storage regulator
D R2APBS1_3140 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
D R2APBS1_3170 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D R2APBS1_3716 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rhd03011]
D R2APBS1_1811 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D R2APBS1_1042 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D R2APBS1_0984 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D R2APBS1_1001 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D R2APBS1_0995 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D R2APBS1_1177 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D R2APBS1_0974 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D R2APBS1_0992 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D R2APBS1_3381 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D R2APBS1_0977 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D R2APBS1_1000 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D R2APBS1_0973 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D R2APBS1_0999 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D R2APBS1_0991 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D R2APBS1_1479 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D R2APBS1_1184 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D R2APBS1_0987 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D R2APBS1_1178 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D R2APBS1_0982 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D R2APBS1_1235 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D R2APBS1_0293 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D R2APBS1_1361 SSU ribosomal protein S31P K19033 PSRP4; 30S ribosomal protein S31
D R2APBS1_0968 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D R2APBS1_0981 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D R2APBS1_0978 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D R2APBS1_0979 50S ribosomal protein L4, bacterial/organelle K02926 RP-L4; large subunit ribosomal protein L4
D R2APBS1_0990 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D R2APBS1_0993 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D R2APBS1_1179 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D R2APBS1_0969 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D R2APBS1_0967 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D R2APBS1_0970 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D R2APBS1_3382 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D R2APBS1_0988 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D R2APBS1_0997 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D R2APBS1_0985 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D R2APBS1_1003 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D R2APBS1_0994 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D R2APBS1_1187 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D R2APBS1_1050 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D R2APBS1_2572 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D R2APBS1_0983 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D R2APBS1_0980 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D R2APBS1_0989 ribosomal protein L24, bacterial/organelle K02895 RP-L24; large subunit ribosomal protein L24
D R2APBS1_2571 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D R2APBS1_3548 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D R2APBS1_0986 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D R2APBS1_0996 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D R2APBS1_3348 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D R2APBS1_1445 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D R2APBS1_3549 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D R2APBS1_3962 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D R2APBS1_1049 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D R2APBS1_1816 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D R2APBS1_0955 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D R2APBS1_0392 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D R2APBS1_3838 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D R2APBS1_0388 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D R2APBS1_3842 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D R2APBS1_3839 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D R2APBS1_0391 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rhd03009]
D R2APBS1_2234 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R2APBS1_2437 serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D R2APBS1_2135 oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D R2APBS1_2233 GTP-binding protein Era K03595 era; GTPase
D R2APBS1_0645 protein of unknown function (DUF697)/GTPase of unknown function K03595 era; GTPase
D R2APBS1_2570 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D R2APBS1_0103 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D R2APBS1_1198 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D R2APBS1_1475 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D R2APBS1_0780 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D R2APBS1_0966 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D R2APBS1_2429 pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D R2APBS1_3256 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D R2APBS1_3695 16S rRNA m(5)C-967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D R2APBS1_2430 16S RNA G1207 methylase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D R2APBS1_3029 16S rRNA m(2)G-966 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D R2APBS1_0867 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D R2APBS1_3924 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D R2APBS1_3276 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D R2APBS1_3279 putative S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D R2APBS1_1595 23S rRNA Gm-2251 2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D R2APBS1_2277 23S rRNA methylase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D R2APBS1_1147 rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D R2APBS1_0316 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D R2APBS1_1285 protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D R2APBS1_2709 putative N6-adenine-specific DNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D R2APBS1_1776 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D R2APBS1_2228 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D R2APBS1_2433 23S RNA-specific pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D R2APBS1_1553 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D R2APBS1_1522 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D R2APBS1_1839 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D R2APBS1_0701 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D R2APBS1_3729 pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D R2APBS1_2439 pseudouridylate synthase, 16S rRNA uridine-516 K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D R2APBS1_0295 pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D R2APBS1_0831 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D R2APBS1_3944 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D R2APBS1_3308 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D R2APBS1_3905 acetyltransferase, ribosomal protein N-acetylase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D R2APBS1_1185 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D R2APBS1_1330 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D R2APBS1_0338 (LSU ribosomal protein L11P)-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D R2APBS1_1339 (LSU ribosomal protein L3P)-glutamine N5-methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D R2APBS1_1497 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D R2APBS1_1840 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D R2APBS1_1012 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D R2APBS1_0856 RNAse H-fold protein YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D R2APBS1_3709 DNA/RNA helicase, superfamily II K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D R2APBS1_1157 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D R2APBS1_3486 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D R2APBS1_1771 ribosome-associated GTPase EngA K03977 engA; GTPase
D R2APBS1_1561 GTP-binding protein HflX K03665 hflX; GTPase
D R2APBS1_3689 putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D R2APBS1_3352 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D R2APBS1_1477 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D R2APBS1_1474 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D R2APBS1_1388 hypothetical protein K14761 rlbA; ribosome-associated protein
D R2APBS1_1146 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein
D R2APBS1_2953 metalloprotein, YbeY/UPF0054 family K07042 ybeY; probable rRNA maturation factor
D R2APBS1_2278 putative RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein
D R2APBS1_1016 hypothetical protein K09889 yjgA; ribosome-associated protein
D R2APBS1_3138 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D R2APBS1_0957 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D R2APBS1_1444 putative metal-binding protein, possibly nucleic-acid binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rhd03016]
D R2APBS1_1390 guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D R2APBS1_0238 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D R2APBS1_1356 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R2APBS1_0827 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R2APBS1_1238 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D R2APBS1_1134 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R2APBS1_1317 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R2APBS1_0734 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D R2APBS1_3855 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R2APBS1_1671 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D R2APBS1_0708 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R2APBS1_2631 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R2APBS1_1175 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D R2APBS1_1047 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R2APBS1_2164 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R2APBS1_1201 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R2APBS1_0833 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R2APBS1_1426 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D R2APBS1_1051 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R2APBS1_1052 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R2APBS1_3843 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D R2APBS1_0522 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D R2APBS1_0230 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D R2APBS1_1437 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D R2APBS1_3314 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D R2APBS1_0463 putative methyltransferase, YaeB/AF_0241 family K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D R2APBS1_1346 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D R2APBS1_1478 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D R2APBS1_2285 tRNA pseudouridine synthase, TruD family K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D R2APBS1_3689 putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D R2APBS1_1559 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D R2APBS1_3959 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D R2APBS1_3682 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D R2APBS1_0873 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D R2APBS1_3961 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D R2APBS1_3278 Bacterial RNase P class A K01978 rnpB; M1 RNA
D R2APBS1_1603 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D R2APBS1_3362 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D R2APBS1_2412 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D R2APBS1_2461 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D R2APBS1_2478 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D R2APBS1_0769 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA
D R2APBS1_3834 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R2APBS1_3833 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R2APBS1_2657 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D R2APBS1_1767 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D R2APBS1_0508 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D R2APBS1_3287 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D R2APBS1_2946 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D R2APBS1_1186 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D R2APBS1_3118 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D R2APBS1_3589 putative rRNA methylase SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D R2APBS1_3592 23S RNA-specific pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D R2APBS1_2433 23S RNA-specific pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D R2APBS1_1606 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D R2APBS1_3582 putative ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D R2APBS1_1176 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D R2APBS1_2379 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D R2APBS1_1066 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D R2APBS1_0723 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D R2APBS1_3783 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D R2APBS1_0722 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D R2APBS1_3616 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D R2APBS1_2589 iron-sulfur cluster binding protein, putative K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D R2APBS1_1067 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D R2APBS1_1022 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D R2APBS1_3148 universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D R2APBS1_0294 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D R2APBS1_2587 ATPase, YjeE family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D R2APBS1_2660 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D R2APBS1_1594 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D R2APBS1_1480 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rhd03012]
D R2APBS1_1476 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D R2APBS1_1048 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D R2APBS1_1639 ATPase component of ABC transporters with duplicated ATPase domain K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D R2APBS1_1041 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D R2APBS1_0963 translation elongation factor TU K02358 tuf; elongation factor Tu
D R2APBS1_0976 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D R2APBS1_3212 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D R2APBS1_0627 translation elongation factor EF-G K02355 fusA; elongation factor G
D R2APBS1_0975 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D R2APBS1_0948 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D R2APBS1_1039 ribosome recycling factor K02838 frr; ribosome recycling factor
D R2APBS1_3235 (protein release factor)-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D R2APBS1_0956 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D R2APBS1_1610 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D R2APBS1_1190 translation elongation factor P K02356 efp; elongation factor P
D R2APBS1_1220 translation elongation factor P/translation initiation factor 5A K02356 efp; elongation factor P
D R2APBS1_2140 lysyl-tRNA synthetase-like protein GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D R2APBS1_1189 L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D R2APBS1_1669 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D R2APBS1_0620 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
D R2APBS1_3593 protein chain release factor B K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rhd03110]
D R2APBS1_1609 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D R2APBS1_0703 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D R2APBS1_2267 endopeptidase Clp ATP-binding regulatory subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D R2APBS1_3956 ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D R2APBS1_2655 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
D R2APBS1_1823 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D R2APBS1_2566 molecular chaperone K04045 hscC; molecular chaperone HscC
D R2APBS1_0347 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R2APBS1_1822 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D R2APBS1_1489 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein
D R2APBS1_3437 protein with DnaJ-like domain K05801 djlA; DnaJ like chaperone protein
D R2APBS1_0606 disulfide bond chaperone K04083 hslO; molecular chaperone Hsp33
D R2APBS1_1824 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D R2APBS1_1488 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D R2APBS1_0449 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D R2APBS1_2638 ribosome-associated heat shock protein implicated in recycling of 50S subunit K04762 hslR; ribosome-associated heat shock protein Hsp15
D R2APBS1_0346 Co-chaperonin GroES K04078 groES; chaperonin GroES
D R2APBS1_2238 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107]
D R2APBS1_2276 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D R2APBS1_3780 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D R2APBS1_0302 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein
D R2APBS1_3547 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D R2APBS1_2727 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D R2APBS1_0168 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D R2APBS1_2613 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D R2APBS1_1537 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D R2APBS1_2262 parvulin-like peptidyl-prolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D R2APBS1_2247 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D R2APBS1_2436 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D R2APBS1_2582 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D R2APBS1_2672 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D R2APBS1_1162 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D R2APBS1_2894 parvulin-like peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D R2APBS1_3254 parvulin-like peptidyl-prolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D R2APBS1_3535 thioredoxin K03671 TXN; thioredoxin
D R2APBS1_2692 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D R2APBS1_1129 thioredoxin K05838 ybbN; putative thioredoxin
D R2APBS1_2607 Glutaredoxin, GrxC family K03676 grxC; glutaredoxin 3
D R2APBS1_2931 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D R2APBS1_3490 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D R2APBS1_0255 protein-disulfide isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D R2APBS1_0256 protein-disulfide isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D R2APBS1_1004 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D R2APBS1_0750 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D R2APBS1_1895 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D R2APBS1_2398 periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rhd04131]
D R2APBS1_1777 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D R2APBS1_0553 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D R2APBS1_0549 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R2APBS1_3753 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D R2APBS1_0551 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D R2APBS1_2655 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rhd03051]
D R2APBS1_2655 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rhd03032]
D R2APBS1_2258 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D R2APBS1_0423 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R2APBS1_2265 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R2APBS1_1053 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D R2APBS1_1810 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D R2APBS1_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R2APBS1_1180 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D R2APBS1_0289 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D R2APBS1_0652 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1930 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_2003 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1026 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R2APBS1_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R2APBS1_3243 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R2APBS1_1136 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R2APBS1_1455 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R2APBS1_2257 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R2APBS1_1434 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R2APBS1_1029 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D R2APBS1_0332 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R2APBS1_3523 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_2141 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_2344 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R2APBS1_2866 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R2APBS1_3120 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein
D R2APBS1_1484 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D R2APBS1_0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D R2APBS1_2758 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R2APBS1_1383 DNA topoisomerase IV, B subunit, proteobacterial K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D R2APBS1_3690 DNA topoisomerase I, bacterial K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rhd03036]
D R2APBS1_0423 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R2APBS1_2234 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R2APBS1_0553 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D R2APBS1_0826 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D R2APBS1_0433 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D R2APBS1_3043 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D R2APBS1_2265 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R2APBS1_1053 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D R2APBS1_1810 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D R2APBS1_1489 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein
D R2APBS1_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R2APBS1_3171 DNA-binding ferritin-like protein (oxidative damage protectant) K04047 dps; starvation-inducible DNA-binding protein
D R2APBS1_0095 DNA-binding ferritin-like protein (oxidative damage protectant) K04047 dps; starvation-inducible DNA-binding protein
D R2APBS1_0336 Factor for inversion stimulation Fis, transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D R2APBS1_1560 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D R2APBS1_0036 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R2APBS1_1567 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R2APBS1_2757 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R2APBS1_3570 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R2APBS1_1675 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D R2APBS1_1524 hypothetical protein K05896 scpA; segregation and condensation protein A
D R2APBS1_1523 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D R2APBS1_3265 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D R2APBS1_2289 septum formation initiator K05589 ftsB; cell division protein FtsB
D R2APBS1_3533 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R2APBS1_3274 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D R2APBS1_2177 DNA segregation ATPase, FtsK/SpoIIIE family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D R2APBS1_3275 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D R2APBS1_3266 cell division septal protein K03589 ftsQ; cell division protein FtsQ
D R2APBS1_3270 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW
D R2APBS1_3532 cell division protein K09811 ftsX; cell division transport system permease protein
D R2APBS1_3264 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R2APBS1_1676 cell division protein ZipA K03528 zipA; cell division protein ZipA
D R2APBS1_3375 hypothetical protein K09888 zapA; cell division protein ZapA
D R2APBS1_3374 TIGR02449 family protein K09892 zapB; cell division protein ZapB
D R2APBS1_3750 putative ATPase K06916 zapE; cell division protein ZapE
D R2APBS1_2586 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R2APBS1_1267 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R2APBS1_2736 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D R2APBS1_2737 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D R2APBS1_2738 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D R2APBS1_0395 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D R2APBS1_0396 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D R2APBS1_0397 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D R2APBS1_0399 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA
D R2APBS1_3921 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D R2APBS1_3863 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D R2APBS1_1950 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D R2APBS1_3920 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R2APBS1_1949 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R2APBS1_1919 PRTRC system ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R2APBS1_2758 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R2APBS1_1383 DNA topoisomerase IV, B subunit, proteobacterial K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D R2APBS1_3682 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D R2APBS1_3924 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D R2APBS1_3953 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC
D R2APBS1_1709 site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC
D R2APBS1_0748 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D R2APBS1_1324 ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D R2APBS1_2409 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D R2APBS1_0258 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rhd03400]
D R2APBS1_2352 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D R2APBS1_0205 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D R2APBS1_3530 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D R2APBS1_2741 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D R2APBS1_3032 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D R2APBS1_1314 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D R2APBS1_0550 S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D R2APBS1_2765 Zn-finger containing NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D R2APBS1_3852 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D R2APBS1_1795 O-6-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D R2APBS1_1797 alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D R2APBS1_1010 G:T/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D R2APBS1_1798 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D R2APBS1_2351 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D R2APBS1_3675 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D R2APBS1_3555 formamidopyrimidine-DNA glycosylase Fpg K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D R2APBS1_3935 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D R2APBS1_3848 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D R2APBS1_1916 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_1641 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_1646 single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R2APBS1_3523 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_2141 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R2APBS1_0332 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R2APBS1_2574 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D R2APBS1_2784 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D R2APBS1_1617 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D R2APBS1_0330 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R2APBS1_2001 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R2APBS1_0971 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D R2APBS1_0972 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R2APBS1_1002 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R2APBS1_3353 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D R2APBS1_1278 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D R2APBS1_2635 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D R2APBS1_2585 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D R2APBS1_2136 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D R2APBS1_2193 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D R2APBS1_1021 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D R2APBS1_1026 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R2APBS1_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R2APBS1_3243 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R2APBS1_1136 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R2APBS1_1455 DNA polymerase III, delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R2APBS1_2257 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R2APBS1_1434 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R2APBS1_0652 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1930 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_2003 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_2344 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R2APBS1_2866 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R2APBS1_0424 T/G mismatch-specific endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D R2APBS1_1250 ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D R2APBS1_1251 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D R2APBS1_1249 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D R2APBS1_2633 protein RecA K03553 recA; recombination protein RecA
D R2APBS1_0712 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D R2APBS1_0714 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D R2APBS1_0711 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D R2APBS1_3503 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D R2APBS1_1181 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D R2APBS1_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D R2APBS1_1911 RecG-like helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R2APBS1_3350 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R2APBS1_2232 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D R2APBS1_1436 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D R2APBS1_1826 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D R2APBS1_1933 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D R2APBS1_3580 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D R2APBS1_1335 putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D R2APBS1_0679 DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D R2APBS1_1484 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D R2APBS1_0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D R2APBS1_3690 DNA topoisomerase I, bacterial K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D R2APBS1_2265 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R2APBS1_0336 Factor for inversion stimulation Fis, transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D R2APBS1_1053 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D R2APBS1_1810 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D R2APBS1_3112 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R2APBS1_0826 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D R2APBS1_0433 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D R2APBS1_3043 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D R2APBS1_3447 nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D R2APBS1_1657 nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D R2APBS1_1656 SOS response UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D R2APBS1_1874 SOS response transcriptional repressor, RecA-mediated autopeptidase K01356 lexA; repressor LexA [EC:3.4.21.88]
D R2APBS1_1679 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D R2APBS1_1873 hypothetical protein K14160 imuA; protein ImuA
D R2APBS1_1680 hypothetical protein K14160 imuA; protein ImuA
D R2APBS1_1872 nucleotidyltransferase/DNA polymerase involved in DNA repair K14161 imuB; protein ImuB
D R2APBS1_1681 nucleotidyltransferase/DNA polymerase involved in DNA repair K14161 imuB; protein ImuB
D R2APBS1_1869 DNA-directed DNA polymerase III PolC K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D R2APBS1_1682 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D R2APBS1_2632 hypothetical protein K03565 recX; regulatory protein
D R2APBS1_3559 DNA/RNA helicase, superfamily I K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D R2APBS1_3161 DNA helicase, Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D R2APBS1_3517 DNA helicase, Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D R2APBS1_1972 DNA helicase, Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D R2APBS1_0174 Lhr-like helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D R2APBS1_1902 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_1903 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_0415 ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_3606 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_1901 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R2APBS1_3608 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rhd03029]
D R2APBS1_2942 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D R2APBS1_1476 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D R2APBS1_1048 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D R2APBS1_1041 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D R2APBS1_0963 translation elongation factor TU K02358 tuf; elongation factor Tu
D R2APBS1_0976 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D R2APBS1_3212 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D R2APBS1_0627 translation elongation factor EF-G K02355 fusA; elongation factor G
D R2APBS1_0975 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D R2APBS1_2233 GTP-binding protein Era K03595 era; GTPase
D R2APBS1_0645 protein of unknown function (DUF697)/GTPase of unknown function K03595 era; GTPase
D R2APBS1_3843 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D R2APBS1_1134 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R2APBS1_0708 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R2APBS1_3855 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R2APBS1_0652 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1930 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_2003 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R2APBS1_1034 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family
D R2APBS1_1823 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D R2APBS1_1824 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D R2APBS1_0347 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R2APBS1_0346 Co-chaperonin GroES K04078 groES; chaperonin GroES
D R2APBS1_1822 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D R2APBS1_2931 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D R2APBS1_3490 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D R2APBS1_2480 acyl-CoA dehydrogenase K15980 ACAD9; acyl-CoA dehydrogenase family member 9 [EC:1.3.99.-]
D R2APBS1_1324 ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D R2APBS1_0283 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D R2APBS1_0282 uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D R2APBS1_3960 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R2APBS1_0280 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D R2APBS1_0543 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 SCO1; protein SCO1
D R2APBS1_2726 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 SCO1; protein SCO1
D R2APBS1_2484 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 SCO1; protein SCO1
D R2APBS1_1697 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 SCO1; protein SCO1
D R2APBS1_2655 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rhd02000]
D R2APBS1_2366 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D R2APBS1_3179 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D R2APBS1_1405 ABC-type multidrug transport system, ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D R2APBS1_2205 ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D R2APBS1_1385 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D R2APBS1_0678 ABC-type multidrug transport system, ATPase and permease component K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D R2APBS1_3290 ATPase component of ABC transporters with duplicated ATPase domain K15738 uup; ABC transport system ATP-binding/permease protein
D R2APBS1_2888 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D R2APBS1_2889 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D R2APBS1_2890 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D R2APBS1_2474 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D R2APBS1_2473 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D R2APBS1_3922 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R2APBS1_3357 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D R2APBS1_3358 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D R2APBS1_3359 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D R2APBS1_3356 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D R2APBS1_3355 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein
D R2APBS1_3929 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D R2APBS1_3930 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein
D R2APBS1_3931 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein
D R2APBS1_1602 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D R2APBS1_0413 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D R2APBS1_1601 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D R2APBS1_1600 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D R2APBS1_1599 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D R2APBS1_1332 phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R2APBS1_2676 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D R2APBS1_2675 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D R2APBS1_2674 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D R2APBS1_0845 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D R2APBS1_0583 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D R2APBS1_0582 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D R2APBS1_3241 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D R2APBS1_3240 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D R2APBS1_3136 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D R2APBS1_0310 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D R2APBS1_0309 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D R2APBS1_2774 ABC-type transport system involved in multi-copper enzyme maturation, permease component K19341 nosY; Cu-processing system permease protein
D R2APBS1_2773 ABC-type multidrug transport system, ATPase component K19340 nosF; Cu-processing system ATP-binding protein
D R2APBS1_2730 CcmB protein K25151 gldF; gliding motility-associated transport system permease protein
D R2APBS1_3552 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein
D R2APBS1_2731 ABC-type multidrug transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein
D R2APBS1_3551 ABC-type multidrug transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein
D R2APBS1_2729 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component K25153 gldG; gliding motility-associatede transport system auxiliary component
D R2APBS1_3553 ABC-type uncharacterized transporter K25153 gldG; gliding motility-associatede transport system auxiliary component
D R2APBS1_2794 ABC-type multidrug transport system, permease component K25180 ybhR; drug efflux transport system permease protein
D R2APBS1_2793 ABC-type multidrug transport system, permease component K25181 ybhS; drug efflux transport system permease protein
D R2APBS1_2792 ABC-type multidrug transport system, ATPase component K25182 ybhF; drug efflux transport system ATP-binding protein
D R2APBS1_2791 multidrug resistance efflux pump K25183 ybhG; membrane fusion protein YbhG
D R2APBS1_2371 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D R2APBS1_2370 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D R2APBS1_2395 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D R2APBS1_2394 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D R2APBS1_2393 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D R2APBS1_2392 heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D R2APBS1_3532 cell division protein K09811 ftsX; cell division transport system permease protein
D R2APBS1_3533 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R2APBS1_1511 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D R2APBS1_0296 ABC-type polysaccharide/polyol phosphate export systems, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D R2APBS1_1063 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D R2APBS1_2116 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D R2APBS1_2465 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D R2APBS1_2056 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D R2APBS1_3457 aminopeptidase N K01992 ABC-2.P; ABC-2 type transport system permease protein
D R2APBS1_2948 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D R2APBS1_0022 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R2APBS1_1512 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R2APBS1_0297 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R2APBS1_1062 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R2APBS1_2466 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R2APBS1_3456 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R2APBS1_2949 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R2APBS1_0688 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0689 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_2360 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_1215 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_1099 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0807 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0808 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0809 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0810 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0811 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0812 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0814 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0815 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0816 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0817 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0818 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_3322 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_3323 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_0878 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D R2APBS1_2361 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R2APBS1_1213 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R2APBS1_1098 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R2APBS1_0806 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R2APBS1_3324 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R2APBS1_0879 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R2APBS1_1075 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D R2APBS1_0287 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D R2APBS1_3501 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D R2APBS1_3111 MFS transporter, sugar porter family K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D R2APBS1_0683 L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D R2APBS1_3284 nucleoside transporter K11537 xapB; MFS transporter, NHS family, xanthosine permease
D R2APBS1_2138 arabinose efflux permease family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D R2APBS1_1161 arabinose efflux permease family protein K08178 JEN; MFS transporter, SHS family, lactate transporter
D R2APBS1_2892 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D R2APBS1_2893 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D R2APBS1_3847 Major Facilitator Superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D R2APBS1_3511 arabinose efflux permease family protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D R2APBS1_2745 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D R2APBS1_2387 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D R2APBS1_2054 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D R2APBS1_0149 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D R2APBS1_2118 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D R2APBS1_2416 nitrate/nitrite transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D R2APBS1_2355 arabinose efflux permease family protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D R2APBS1_3482 sugar phosphate permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D R2APBS1_3143 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D R2APBS1_3142 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr
D R2APBS1_3141 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D R2APBS1_2139 MIP family channel protein K06188 aqpZ; aquaporin Z
D R2APBS1_0078 ammonium transporter K03320 amt; ammonium transporter, Amt family
D R2APBS1_1506 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_2329 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_3291 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_0334 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_2494 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_3480 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_0029 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_1275 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_3613 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_1151 MAPEG family K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_1226 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R2APBS1_2940 glutathione S-transferase K03599 sspA; stringent starvation protein A
D R2APBS1_3335 tetratricopeptide repeat protein K07114 yfbK; Ca-activated chloride channel homolog
D R2APBS1_3336 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog
D R2APBS1_3327 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D R2APBS1_1404 small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel
D R2APBS1_3463 small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D R2APBS1_2286 Mg2+ transporter MgtE K06213 mgtE; magnesium transporter
D R2APBS1_2976 flagellar motor component K02556 motA; chemotaxis protein MotA
D R2APBS1_2975 flagellar motor protein K02557 motB; chemotaxis protein MotB
D R2APBS1_2368 biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D R2APBS1_0007 biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D R2APBS1_2367 biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D R2APBS1_0008 biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D R2APBS1_0009 biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D R2APBS1_0716 Cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D R2APBS1_0717 Cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR
D R2APBS1_2956 Mg2+/Co2+ transporter K03284 corA; magnesium transporter
D R2APBS1_2746 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D R2APBS1_1856 MerT mercuric transport protein K08363 merT; mercuric ion transport protein
D R2APBS1_3785 MerT mercuric transport protein K08363 merT; mercuric ion transport protein
D R2APBS1_2071 MerT mercuric transport protein K08363 merT; mercuric ion transport protein
D R2APBS1_2101 MerT mercuric transport protein K08363 merT; mercuric ion transport protein
D R2APBS1_1726 MerT mercuric transport protein K08363 merT; mercuric ion transport protein
D R2APBS1_1855 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein
D R2APBS1_3786 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein
D R2APBS1_2072 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein
D R2APBS1_2100 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein
D R2APBS1_1727 copper chaperone K08364 merP; periplasmic mercuric ion binding protein
D R2APBS1_2099 MerC mercury resistance protein K19058 merC; mercuric ion transport protein
D R2APBS1_2073 MerC mercury resistance protein K19058 merC; mercuric ion transport protein
D R2APBS1_1854 MerC mercury resistance protein K19058 merC; mercuric ion transport protein
D R2APBS1_3789 MerC mercury resistance protein K19058 merC; mercuric ion transport protein
D R2APBS1_2077 MerE protein K19059 merE; mercuric ion transport protein
D R2APBS1_2095 MerE protein K19059 merE; mercuric ion transport protein
D R2APBS1_1850 MerE protein K19059 merE; mercuric ion transport protein
D R2APBS1_3117 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D R2APBS1_3194 OmpA-like transmembrane domain protein K16079 omp31; outer membrane immunogenic protein
D R2APBS1_1551 outer membrane protein/peptidoglycan-associated (lipo)protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D R2APBS1_0554 OmpA-like transmembrane domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D R2APBS1_0555 opacity protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D R2APBS1_0271 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D R2APBS1_0301 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein
D R2APBS1_3685 phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase
D R2APBS1_1199 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D R2APBS1_0851 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D R2APBS1_0141 TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D R2APBS1_1532 outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_3285 outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_3096 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_0705 outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_2154 outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_0167 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_2642 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_3630 outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_0889 outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_2545 outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_0176 outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_0626 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_0804 outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_3301 outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_3421 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_0408 outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_0428 outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R2APBS1_1735 outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D R2APBS1_1719 outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D R2APBS1_1748 outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D R2APBS1_0182 outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D R2APBS1_2038 outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D R2APBS1_1293 outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D R2APBS1_0363 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D R2APBS1_0071 efflux transporter, outer membrane factor lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system
D R2APBS1_1100 outer membrane protein K18904 nodT; outer membrane protein, multidrug efflux system
D R2APBS1_2385 efflux transporter, outer membrane factor lipoprotein, NodT family K15550 mdtP; outer membrane protein, multidrug efflux system
D R2APBS1_3086 periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein
D R2APBS1_0082 carbohydrate-selective porin K07267 oprB; porin
D R2APBS1_1034 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family
D R2APBS1_1772 Beta-barrel assembly machine subunit BamB K17713 bamB; outer membrane protein assembly factor BamB
D R2APBS1_0700 Beta-barrel assembly machine subunit BamD K05807 bamD; outer membrane protein assembly factor BamD
D R2APBS1_1830 small protein A (tmRNA-binding) K06186 bamE; outer membrane protein assembly factor BamE
D R2APBS1_3183 outer membrane protein K07278 tamA; translocation and assembly module TamA
D R2APBS1_3185 hypothetical protein K09800 tamB; translocation and assembly module TamB
D R2APBS1_3135 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D R2APBS1_3134 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D R2APBS1_3253 organic solvent tolerance protein OstA K04744 lptD; LPS-assembly protein
D R2APBS1_1135 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D R2APBS1_2954 putative Mg2+ and Co2+ transporter CorC K06189 corC; hemolysin (HlyC) family protein
D R2APBS1_3103 Major Facilitator Superfamily transporter K16211 malY; maltose/moltooligosaccharide transporter
D R2APBS1_2495 gamma-aminobutyrate permease-like transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D R2APBS1_1360 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D R2APBS1_1739 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D R2APBS1_1750 heavy metal efflux pump, cobalt-zinc-cadmium K15726 czcA; heavy metal efflux system protein
D R2APBS1_3418 heavy metal efflux pump, cobalt-zinc-cadmium K15726 czcA; heavy metal efflux system protein
D R2APBS1_1737 heavy metal efflux pump, cobalt-zinc-cadmium K15726 czcA; heavy metal efflux system protein
D R2APBS1_1721 heavy metal efflux pump, cobalt-zinc-cadmium K07787 cusA; copper/silver efflux system protein
D R2APBS1_1295 heavy metal efflux pump, cobalt-zinc-cadmium K07787 cusA; copper/silver efflux system protein
D R2APBS1_0072 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18299 mexF; multidrug efflux pump
D R2APBS1_1266 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump
D R2APBS1_3745 cation/multidrug efflux pump K07788 mdtB; multidrug efflux pump
D R2APBS1_0142 cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump
D R2APBS1_0143 cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump
D R2APBS1_3744 cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump
D R2APBS1_1597 cation/cationic drug transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D R2APBS1_2200 putative permease, DMT superfamily K11939 rhtA; inner membrane transporter RhtA
D R2APBS1_2756 putative permease, DMT superfamily K11939 rhtA; inner membrane transporter RhtA
D R2APBS1_2467 Na+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D R2APBS1_0268 Kef-type potassium/proton antiporter, CPA2 family K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D R2APBS1_2248 Kef-type K+ transport system, predicted NAD-binding component K26735 KEA4_5_6; K+:H+ antiporter
D R2APBS1_2144 Kef-type K+ transport system, membrane component K26730 napA; Na+:H+ antiporter
D R2APBS1_0636 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D R2APBS1_3379 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D R2APBS1_2330 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D R2APBS1_1302 chromate transporter, chromate ion transporter family K07240 chrA; chromate transporter
D R2APBS1_1409 arsenical-resistance protein K03325 ACR3; arsenite transporter
D R2APBS1_1731 arsenical-resistance protein K03325 ACR3; arsenite transporter
D R2APBS1_0189 multisubunit Na+/H+ antiporter, MnhC subunit K05560 phaC; multicomponent K+:H+ antiporter subunit C
D R2APBS1_0190 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K05561 phaD; multicomponent K+:H+ antiporter subunit D
D R2APBS1_0191 multisubunit Na+/H+ antiporter, MnhE subunit K05562 phaE; multicomponent K+:H+ antiporter subunit E
D R2APBS1_0192 multisubunit Na+/H+ antiporter, MnhF subunit K05563 phaF; multicomponent K+:H+ antiporter subunit F
D R2APBS1_0193 multisubunit potassium/proton antiporter, PhaG subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G
D R2APBS1_1236 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D R2APBS1_2640 putative permease K24180 mleP; malate permease and related proteins
D R2APBS1_0713 K+ transporter K03549 kup; KUP system potassium uptake protein
D R2APBS1_2487 putative branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D R2APBS1_2486 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D R2APBS1_2306 putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D R2APBS1_1746 putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D R2APBS1_2929 multiple antibiotic transporter K05595 marC; multiple antibiotic resistance protein
D R2APBS1_3270 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW
D R2APBS1_0625 putative membrane protein K23242 mntP; manganese efflux pump family protein
D R2APBS1_1742 high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter
D R2APBS1_2568 high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter
D R2APBS1_0762 carbon starvation protein, predicted membrane protein K23676 btsT; pyruvate/proton symporter
D R2APBS1_0598 TonB family protein K03832 tonB; periplasmic protein TonB
D R2APBS1_3866 TonB family protein K03832 tonB; periplasmic protein TonB
D R2APBS1_0006 TonB family protein K03832 tonB; periplasmic protein TonB
D R2APBS1_0858 TonB family protein K03832 tonB; periplasmic protein TonB
D R2APBS1_0477 TonB family protein K03832 tonB; periplasmic protein TonB
D R2APBS1_0720 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D R2APBS1_0718 F0F1-type ATP synthase, beta subunit K03646 tolA; colicin import membrane protein
D R2APBS1_0719 tol-pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D R2APBS1_0794 periplasmic component of the Tol biopolymer transport system K03641 tolB; TolB protein
D R2APBS1_0372 vacuolar-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D R2APBS1_2898 respiratory nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2897 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2895 respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D R2APBS1_2386 multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system
D R2APBS1_0150 multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system
D R2APBS1_3419 RND family efflux transporter, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D R2APBS1_1736 RND family efflux transporter, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D R2APBS1_1751 membrane-fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D R2APBS1_1720 RND family efflux transporter, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D R2APBS1_1294 RND family efflux transporter, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D R2APBS1_3180 multidrug resistance efflux pump K13408 cvaA; membrane fusion protein
D R2APBS1_0073 RND family efflux transporter, MFP subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D R2APBS1_1267 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R2APBS1_0156 RND family efflux transporter, MFP subunit K21137 triB; membrane fusion protein, multidrug efflux system
D R2APBS1_3746 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D R2APBS1_3331 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D R2APBS1_3084 ATPase involved in chromosome partitioning K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D R2APBS1_3085 polysaccharide chain length determinant protein, PEP-CTERM locus subfamily K25590 epsF; protein tyrosine kinase modulator
D R2APBS1_2643 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D R2APBS1_1232 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D R2APBS1_1233 Fe2+ transport system protein B K04759 feoB; ferrous iron transport protein B
D R2APBS1_0204 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D R2APBS1_2397 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D R2APBS1_1084 outer membrane protein V K07274 mipA; MipA family protein
C 02044 Secretion system [BR:rhd02044]
D R2APBS1_0363 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D R2APBS1_3180 multidrug resistance efflux pump K13408 cvaA; membrane fusion protein
D R2APBS1_3179 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D R2APBS1_3082 putative secretion ATPase, PEP-CTERM locus subfamily K02450 gspA; general secretion pathway protein A
D R2APBS1_3717 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D R2APBS1_3835 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D R2APBS1_3727 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D R2APBS1_3726 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D R2APBS1_3725 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D R2APBS1_3724 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D R2APBS1_3723 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D R2APBS1_3722 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D R2APBS1_3721 type II secretory pathway, component PulK K02460 gspK; general secretion pathway protein K
D R2APBS1_3720 Tfp pilus assembly protein PilN K02461 gspL; general secretion pathway protein L
D R2APBS1_3719 Tfp pilus assembly protein PilO K02462 gspM; general secretion pathway protein M
D R2APBS1_3718 hypothetical protein K02463 gspN; general secretion pathway protein N
D R2APBS1_0870 type II secretion system protein N (GspN) K02463 gspN; general secretion pathway protein N
D R2APBS1_0906 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D R2APBS1_0922 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D R2APBS1_0923 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D R2APBS1_0909 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D R2APBS1_0908 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D R2APBS1_0731 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D R2APBS1_1248 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D R2APBS1_1775 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D R2APBS1_0860 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG
D R2APBS1_1490 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D R2APBS1_0861 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D R2APBS1_0862 chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI
D R2APBS1_0863 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D R2APBS1_3344 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D R2APBS1_3343 Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D R2APBS1_3342 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D R2APBS1_3341 Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D R2APBS1_3340 type IV pilus secretin PilQ/competence protein K02666 pilQ; type IV pilus assembly protein PilQ
D R2APBS1_0848 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D R2APBS1_0561 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU
D R2APBS1_0849 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU
D R2APBS1_0729 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D R2APBS1_1244 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D R2APBS1_0728 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D R2APBS1_1245 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D R2APBS1_1246 Tfp pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D R2APBS1_0726 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D R2APBS1_1247 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D R2APBS1_1458 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D R2APBS1_0730 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D R2APBS1_2785 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D R2APBS1_1243 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D R2APBS1_1345 FimV N-terminal domain protein K08086 fimV; pilus assembly protein FimV
D R2APBS1_0846 YGGT family protein K02221 yggT; YggT family protein
D R2APBS1_1108 competence protein ComEA-like protein with helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA
D R2APBS1_2369 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D R2APBS1_2983 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D R2APBS1_2984 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D R2APBS1_2972 hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D R2APBS1_2997 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF
D R2APBS1_2995 flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH
D R2APBS1_2994 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D R2APBS1_2989 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R2APBS1_2988 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D R2APBS1_2987 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D R2APBS1_2986 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D R2APBS1_2985 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D R2APBS1_1981 TraG-like protein, N-terminal region K12056 traG; conjugal transfer mating pair stabilization protein TraG
D R2APBS1_1979 hypothetical protein K12057 traF; conjugal transfer pilus assembly protein TraF
D R2APBS1_1994 TraU protein K12060 traU; conjugal transfer pilus assembly protein TraU
D R2APBS1_1992 Type-F conjugative transfer system pilin assembly protein K12061 traW; conjugal transfer pilus assembly protein TraW
D R2APBS1_1991 type IV secretory pathway, protease TraF K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D R2APBS1_1989 type-IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D R2APBS1_1987 type IV conjugative transfer system lipoprotein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D R2APBS1_1986 Bacterial conjugation TrbI-like protein K12065 traB; conjugal transfer pilus assembly protein TraB
D R2APBS1_1985 TraK protein K12066 traK; conjugal transfer pilus assembly protein TraK
D R2APBS1_1984 TraE protein K12067 traE; conjugal transfer pilus assembly protein TraE
D R2APBS1_1988 TrbC/VIRB2 family protein K12069 traA; conjugal transfer pilus assembly protein TraA
D R2APBS1_1997 putative HD superfamily hydrolase K12070 traI; conjugal transfer pilus assembly protein TraI
D R2APBS1_1998 conjugative coupling factor TraD, SXT/TOL subfamily K12071 traD; conjugal transfer pilus assembly protein TraD
D R2APBS1_0750 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D R2APBS1_1895 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D R2APBS1_1980 Conjugative relaxosome accessory transposon protein K12072 traH; conjugative transfer pilus assembly protein TraH
D R2APBS1_3685 phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase
D R2APBS1_0302 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein
D R2APBS1_0301 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein
D R2APBS1_0300 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D R2APBS1_0303 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D R2APBS1_3260 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R2APBS1_3547 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D R2APBS1_1069 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD
D R2APBS1_0965 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D R2APBS1_1070 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D R2APBS1_2128 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D R2APBS1_0998 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D R2APBS1_1183 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R2APBS1_3030 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R2APBS1_1068 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D R2APBS1_3960 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R2APBS1_2776 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D R2APBS1_3506 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D R2APBS1_3505 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D R2APBS1_3504 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rhd02042]
D R2APBS1_3117 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D R2APBS1_2912 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
D R2APBS1_0478 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rhd02022]
D R2APBS1_2610 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R2APBS1_2609 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D R2APBS1_0511 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D R2APBS1_0510 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP
D R2APBS1_0186 signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D R2APBS1_0187 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07666 qseB; two-component system, OmpR family, response regulator QseB
D R2APBS1_3431 signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D R2APBS1_2801 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D R2APBS1_0088 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D R2APBS1_3433 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D R2APBS1_1102 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D R2APBS1_2802 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D R2APBS1_1828 signal transduction histidine kinase, glucose-6-phosphate specific K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D R2APBS1_1827 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K20264 fusR; two-component system, NarL family, response regulator FusR
D R2APBS1_2125 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D R2APBS1_1064 signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D R2APBS1_1065 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07693 desR; two-component system, NarL family, response regulator DesR
D R2APBS1_0115 Histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D R2APBS1_0114 response regulator of the LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR
D R2APBS1_0105 signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D R2APBS1_0106 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D R2APBS1_0696 signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D R2APBS1_0690 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR
D R2APBS1_3057 PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator
D R2APBS1_2968 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2977 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2969 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R2APBS1_2979 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R2APBS1_2962 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D R2APBS1_3016 chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D R2APBS1_0864 chemotaxis protein histidine kinase-like protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D R2APBS1_0860 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG
D R2APBS1_1490 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D R2APBS1_0861 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D R2APBS1_0865 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D R2APBS1_0891 signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D R2APBS1_0890 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein K15012 regA; two-component system, response regulator RegA
C 02035 Bacterial motility proteins [BR:rhd02035]
D R2APBS1_2968 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2977 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R2APBS1_2966 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D R2APBS1_2974 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D R2APBS1_2963 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D R2APBS1_2964 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D R2APBS1_2962 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D R2APBS1_2969 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R2APBS1_2979 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R2APBS1_2978 chemotaxis protein K03414 cheZ; chemotaxis protein CheZ
D R2APBS1_3016 chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D R2APBS1_3017 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2961 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2967 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R2APBS1_2923 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D R2APBS1_2995 flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH
D R2APBS1_2994 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D R2APBS1_2993 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D R2APBS1_2988 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D R2APBS1_2987 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D R2APBS1_2986 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D R2APBS1_2985 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D R2APBS1_2983 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D R2APBS1_2984 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D R2APBS1_2996 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D R2APBS1_2990 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D R2APBS1_2989 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R2APBS1_2997 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF
D R2APBS1_3008 flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D R2APBS1_3018 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D R2APBS1_3009 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D R2APBS1_2991 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL
D R2APBS1_2998 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D R2APBS1_2992 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D R2APBS1_3015 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D R2APBS1_3014 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D R2APBS1_3013 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D R2APBS1_3011 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D R2APBS1_3010 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D R2APBS1_3007 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D R2APBS1_3012 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D R2APBS1_3006 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D R2APBS1_3005 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D R2APBS1_3020 flagellar biosynthesis/type III secretory pathway chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D R2APBS1_3004 flagellin/flagellar hook associated protein K02406 fliC; flagellin
D R2APBS1_3003 flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D R2APBS1_3002 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D R2APBS1_3001 hypothetical protein K02423 fliT; flagellar protein FliT
D R2APBS1_2980 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D R2APBS1_2976 flagellar motor component K02556 motA; chemotaxis protein MotA
D R2APBS1_2975 flagellar motor protein K02557 motB; chemotaxis protein MotB
D R2APBS1_2999 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D R2APBS1_3019 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D R2APBS1_2982 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D R2APBS1_2981 ATPase involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG
D R2APBS1_0860 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG
D R2APBS1_1490 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D R2APBS1_0861 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D R2APBS1_0862 chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI
D R2APBS1_0863 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D R2APBS1_0864 chemotaxis protein histidine kinase-like protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D R2APBS1_0690 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR
D R2APBS1_0696 signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D R2APBS1_0848 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D R2APBS1_0561 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU
D R2APBS1_0849 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU
D R2APBS1_0865 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D R2APBS1_0866 chemotaxis signal transduction protein K06598 chpC; chemosensory pili system protein ChpC
D R2APBS1_0922 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D R2APBS1_0923 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D R2APBS1_0909 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D R2APBS1_0908 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D R2APBS1_0906 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D R2APBS1_1775 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D R2APBS1_3340 type IV pilus secretin PilQ/competence protein K02666 pilQ; type IV pilus assembly protein PilQ
D R2APBS1_3341 Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D R2APBS1_3342 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D R2APBS1_3343 Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D R2APBS1_3344 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D R2APBS1_1458 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D R2APBS1_0729 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D R2APBS1_1244 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D R2APBS1_0728 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D R2APBS1_1245 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D R2APBS1_1246 Tfp pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D R2APBS1_0726 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D R2APBS1_1247 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D R2APBS1_0731 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D R2APBS1_1248 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D R2APBS1_0302 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein
D R2APBS1_0301 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein
D R2APBS1_0300 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D R2APBS1_0303 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rhd04812]
D R2APBS1_0395 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D R2APBS1_1974 hypothetical protein K18640 parM; plasmid segregation protein ParM
D R2APBS1_3264 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R2APBS1_3265 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D R2APBS1_2736 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D R2APBS1_2737 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D R2APBS1_2738 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D R2APBS1_3921 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D R2APBS1_3863 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D R2APBS1_1950 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D R2APBS1_3920 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R2APBS1_1949 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R2APBS1_1919 PRTRC system ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rhd04147]
D R2APBS1_2655 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
D R2APBS1_0553 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D R2APBS1_2290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R2APBS1_0549 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R2APBS1_0559 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D R2APBS1_0551 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D R2APBS1_2613 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D R2APBS1_3413 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D R2APBS1_0347 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R2APBS1_1823 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D R2APBS1_3909 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R2APBS1_1769 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D R2APBS1_0963 translation elongation factor TU K02358 tuf; elongation factor Tu
D R2APBS1_0976 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D R2APBS1_1437 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D R2APBS1_0287 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D R2APBS1_1526 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R2APBS1_3867 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_2563 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R2APBS1_3295 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R2APBS1_0377 adenylate kinase-like kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D R2APBS1_0736 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D R2APBS1_1210 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D R2APBS1_1206 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D R2APBS1_0575 cystathionine beta-lyase/cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D R2APBS1_0026 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D R2APBS1_0393 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D R2APBS1_0079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R2APBS1_3540 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D R2APBS1_0536 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D R2APBS1_1838 pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D R2APBS1_3632 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R2APBS1_1056 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R2APBS1_0335 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R2APBS1_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_3454 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R2APBS1_0586 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D R2APBS1_3906 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R2APBS1_0132 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R2APBS1_2129 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D R2APBS1_3753 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D R2APBS1_2468 bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein
D R2APBS1_0196 bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:rhd02048]
D R2APBS1_1575 helicase, type I site-specific restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D R2APBS1_2404 helicase, type I site-specific restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D R2APBS1_3887 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D R2APBS1_3619 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D R2APBS1_1573 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D R2APBS1_3878 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D R2APBS1_3622 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D R2APBS1_2406 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D R2APBS1_1572 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D R2APBS1_2405 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D R2APBS1_3877 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D R2APBS1_2344 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R2APBS1_2866 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R2APBS1_1958 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D R2APBS1_0423 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R2APBS1_0638 DNA/RNA helicase, superfamily II K01156 res; type III restriction enzyme [EC:3.1.21.5]
D R2APBS1_0641 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D R2APBS1_1120 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D R2APBS1_1571 hypothetical protein K07448 mrr; restriction system protein
D R2APBS1_2653 restriction endonuclease K07448 mrr; restriction system protein
D R2APBS1_3741 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D R2APBS1_3664 putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D R2APBS1_3621 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D R2APBS1_0639 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D R2APBS1_3620 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D R2APBS1_0640 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D R2APBS1_3402 putative nucleic acid-binding protein, contains PIN domain K07062 fitB; toxin FitB [EC:3.1.-.-]
D R2APBS1_3403 hypothetical protein K21495 fitA; antitoxin FitA
D R2APBS1_3264 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R2APBS1_0395 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D R2APBS1_2758 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R2APBS1_1383 DNA topoisomerase IV, B subunit, proteobacterial K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D R2APBS1_1356 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R2APBS1_2372 hypothetical protein K19168 cptA; toxin CptA
D R2APBS1_2373 hypothetical protein K09159 cptB; antitoxin CptB
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rhd04090]
C 01504 Antimicrobial resistance genes [BR:rhd01504]
D R2APBS1_3511 arabinose efflux permease family protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D R2APBS1_1164 TonB family protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_0885 antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_3611 antirepressor regulating drug resistance protein K02172 blaR1; bla regulator protein blaR1
D R2APBS1_0884 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D R2APBS1_1165 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D R2APBS1_3415 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R2APBS1_0511 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D R2APBS1_0510 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP
D R2APBS1_1267 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R2APBS1_1266 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump
D R2APBS1_0073 RND family efflux transporter, MFP subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D R2APBS1_0072 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18299 mexF; multidrug efflux pump
D R2APBS1_0071 efflux transporter, outer membrane factor lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system
D R2APBS1_0365 transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D R2APBS1_1414 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D R2APBS1_3791 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D R2APBS1_1743 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D R2APBS1_0363 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D R2APBS1_0074 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rhd00537]
D R2APBS1_3632 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R2APBS1_0458 neutral trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D R2APBS1_3413 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rhd03100]
D R2APBS1_2249 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D R2APBS1_2413 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D R2APBS1_0390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D R2APBS1_3840 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D R2APBS1_2273 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D R2APBS1_2275 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D R2APBS1_2423 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D R2APBS1_3624 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D R2APBS1_2925 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D R2APBS1_2251 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D R2APBS1_2263 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D R2APBS1_1621 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D R2APBS1_3380 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D R2APBS1_0953 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D R2APBS1_2250 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D R2APBS1_2595 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D R2APBS1_1619 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R2APBS1_1620 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R2APBS1_3312 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R2APBS1_0961 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R2APBS1_2272 tRNA-His K14226 tRNA-His; tRNA His
D R2APBS1_0389 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D R2APBS1_3841 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D R2APBS1_1593 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_2127 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_2403 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_1634 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_2270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R2APBS1_0724 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D R2APBS1_2271 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D R2APBS1_3820 tRNA-Met K14230 tRNA-Met; tRNA Met
D R2APBS1_1473 tRNA-Met K14230 tRNA-Met; tRNA Met
D R2APBS1_0222 tRNA-Met K14230 tRNA-Met; tRNA Met
D R2APBS1_3034 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D R2APBS1_1425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D R2APBS1_1055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D R2APBS1_2274 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D R2APBS1_2629 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D R2APBS1_2256 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D R2APBS1_1432 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D R2APBS1_2162 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D R2APBS1_0517 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D R2APBS1_0962 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D R2APBS1_1241 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D R2APBS1_0964 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D R2APBS1_0960 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D R2APBS1_2264 tRNA-Val K14237 tRNA-Val; tRNA Val
D R2APBS1_2783 tRNA-Val K14237 tRNA-Val; tRNA Val
D R2APBS1_1260 tRNA-Val K14237 tRNA-Val; tRNA Val
D R2APBS1_0388 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D R2APBS1_3842 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D R2APBS1_3839 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D R2APBS1_0391 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D R2APBS1_0392 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D R2APBS1_3838 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D R2APBS1_1433 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D R2APBS1_3278 Bacterial RNase P class A K01978 rnpB; M1 RNA
D R2APBS1_1834 IMG reference gene:2506720067 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D R2APBS1_3857 short-chain alcohol dehydrogenase K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276]
D R2APBS1_0085 Membrane bound FAD containing D-sorbitol dehydrogenase K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14]
D R2APBS1_2755 putative oxidoreductase, aryl-alcohol dehydrogenase like protein K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D R2APBS1_0272 NAD-dependent aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D R2APBS1_1814 NADH:flavin oxidoreductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D R2APBS1_3198 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D R2APBS1_3199 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D R2APBS1_3153 putative dinucleotide-binding enzyme K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D R2APBS1_2761 putative dinucleotide-binding enzyme K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D R2APBS1_0590 flavin-dependent dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D R2APBS1_0210 flavin-dependent dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D R2APBS1_0367 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D R2APBS1_1517 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D R2APBS1_0375 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D R2APBS1_1543 alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D R2APBS1_1386 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D R2APBS1_1677 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D R2APBS1_1678 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D R2APBS1_2690 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D R2APBS1_2308 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D R2APBS1_2876 cytochrome B561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D R2APBS1_2334 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D R2APBS1_2600 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D R2APBS1_0677 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D R2APBS1_2521 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D R2APBS1_0545 peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D R2APBS1_1544 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D R2APBS1_1141 peroxiredoxin, OsmC subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D R2APBS1_2471 peroxiredoxin, Ohr subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D R2APBS1_1794 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D R2APBS1_3932 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D R2APBS1_2402 putative metal-dependent enzyme of the double-stranded beta helix superfamily K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D R2APBS1_0749 putative iron-regulated protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D R2APBS1_3578 sterol desaturase K19703 FA2H; 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase [EC:1.14.18.6]
D R2APBS1_1852 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D R2APBS1_2097 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D R2APBS1_3788 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D R2APBS1_2075 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D R2APBS1_0482 flavodoxin reductase family protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D R2APBS1_1734 glutaredoxin-dependent arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D R2APBS1_1521 glutaredoxin-dependent arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D R2APBS1_1730 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D R2APBS1_1732 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D R2APBS1_1408 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D R2APBS1_2169 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D R2APBS1_2171 hydrogenase 4 membrane component (E) K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D R2APBS1_2172 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D R2APBS1_2282 protein-L-isoaspartate and D-aspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D R2APBS1_0364 protein-L-isoaspartate carboxylmethyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D R2APBS1_2748 methyltransferase, cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D R2APBS1_0197 methyltransferase, cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D R2APBS1_0200 methyltransferase, cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D R2APBS1_3105 acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D R2APBS1_1387 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D R2APBS1_1225 acetyltransferase, N-acetylglutamate synthase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D R2APBS1_1088 3-oxoacyl-(acyl-carrier-protein) synthase K14660 nodE; nodulation protein E [EC:2.3.1.-]
D R2APBS1_3710 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D R2APBS1_2181 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D R2APBS1_1439 transglutaminase-like enzyme, predicted cysteine protease K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D R2APBS1_2718 putative arginyl-tRNA:protein arginylyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D R2APBS1_0900 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D R2APBS1_2769 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D R2APBS1_2253 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D R2APBS1_0350 glutamine synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D R2APBS1_3311 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D R2APBS1_2424 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D R2APBS1_1758 hypothetical protein K25555 dncV; cyclic GMP-AMP synthase [EC:2.7.7.-]
D R2APBS1_3139 serine kinase of the HPr protein, regulates carbohydrate metabolism K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D R2APBS1_1096 esterase/lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D R2APBS1_3333 putative phosphatase, C-terminal domain of histone macro H2A1 like protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D R2APBS1_1373 carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D R2APBS1_0715 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D R2APBS1_2575 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D R2APBS1_3864 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D R2APBS1_2383 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D R2APBS1_3728 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D R2APBS1_3417 negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R2APBS1_2711 negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R2APBS1_3299 N-acyl-D-aspartate/D-glutamate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D R2APBS1_3302 N-acyl-D-aspartate/D-glutamate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D R2APBS1_0764 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D R2APBS1_3693 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D R2APBS1_2305 penicilin amidase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D R2APBS1_1456 putative LmbE-like protein K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D R2APBS1_2197 glycosyl transferase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D R2APBS1_1442 MAF protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D R2APBS1_3216 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D R2APBS1_1441 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D R2APBS1_3339 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D R2APBS1_2588 yjeF-like protein, hydroxyethylthiazole kinase-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D R2APBS1_2554 methylmalonyl-CoA mutase, N-terminal domain/subunit K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D R2APBS1_3073 putative ATP-grasp enzyme K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D R2APBS1_0378 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D R2APBS1_1315 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D R2APBS1_2189 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D R2APBS1_2788 P-type ATPase, translocating K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D R2APBS1_0569 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D R2APBS1_0285 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D R2APBS1_0548 ferredoxin K05524 fdxA; ferredoxin
D R2APBS1_2596 ferredoxin K05524 fdxA; ferredoxin
D R2APBS1_0587 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D R2APBS1_0841 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D R2APBS1_1590 lactoylglutathione lyase-like lyase K08234 yaeR; glyoxylase I family protein
D R2APBS1_1110 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
D R2APBS1_3584 acetyltransferase, ribosomal protein N-acetylase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D R2APBS1_1809 Protein of unknown function (DUF1049) K08992 lapA; lipopolysaccharide assembly protein A
D R2APBS1_1808 putative N-acetylglucosaminyl transferase K19804 lapB; lipopolysaccharide assembly protein B
D R2APBS1_3446 putative integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D R2APBS1_0328 putative enzyme of heme biosynthesis K02498 hemY; HemY protein
D R2APBS1_3591 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D R2APBS1_3590 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D R2APBS1_3604 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
D R2APBS1_2695 putative flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D R2APBS1_0094 putative flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D R2APBS1_1325 putative flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D R2APBS1_2513 putative flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D R2APBS1_2358 putative membrane protein K15977 K15977; putative oxidoreductase
D R2APBS1_3152 putative membrane protein K15977 K15977; putative oxidoreductase
D R2APBS1_3812 putative membrane protein K15977 K15977; putative oxidoreductase
D R2APBS1_0092 putative membrane protein K15977 K15977; putative oxidoreductase
D R2APBS1_3150 putative esterase K06999 K06999; phospholipase/carboxylesterase
D R2APBS1_0116 putative esterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D R2APBS1_2223 cold shock protein K03704 cspA; cold shock protein
D R2APBS1_3936 cold shock protein K03704 cspA; cold shock protein
D R2APBS1_2666 cold shock protein K03704 cspA; cold shock protein
D R2APBS1_2667 cold shock protein K03704 cspA; cold shock protein
D R2APBS1_3605 nitrogen regulatory protein PII K04752 glnK; nitrogen regulatory protein P-II 2
D R2APBS1_3684 transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D R2APBS1_2057 ABC-type multidrug transport system, ATPase component K13926 rbbA; ribosome-dependent ATPase
D R2APBS1_2115 ABC-type multidrug transport system, ATPase component K13926 rbbA; ribosome-dependent ATPase
D R2APBS1_2871 putative exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein
D R2APBS1_2797 putative exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D R2APBS1_1608 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D R2APBS1_2269 trigger factor K03545 tig; trigger factor
D R2APBS1_1833 SsrA-binding protein K03664 smpB; SsrA-binding protein
D R2APBS1_3603 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D R2APBS1_0040 putative proline hydroxylase K07394 K07394; SM-20-related protein
D R2APBS1_1702 putative protein-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase
D R2APBS1_2481 putative redox protein, regulator of disulfide bond formation K07397 yhfA; putative redox protein
D R2APBS1_1837 thioredoxin-like protein K07400 nfuA; Fe/S biogenesis protein NfuA
D R2APBS1_2459 membrane-bound serine protease (ClpP class) K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D R2APBS1_3113 putative methylated DNA-protein cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D R2APBS1_2219 hypothetical protein K07454 K07454; putative restriction endonuclease
D R2APBS1_3854 DNA repair protein K03630 radC; DNA repair protein RadC
D R2APBS1_2621 DNA repair protein K03630 radC; DNA repair protein RadC
D R2APBS1_0313 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D R2APBS1_3046 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D R2APBS1_3281 TIGR00252 family protein K07460 yraN; putative endonuclease
D R2APBS1_3292 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D R2APBS1_3607 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D R2APBS1_0048 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D R2APBS1_3691 DNA protecting protein DprA K04096 smf; DNA processing protein
D R2APBS1_1883 zinc-binding protein, primase-helicase K06919 K06919; putative DNA primase/helicase
D R2APBS1_2341 transposase, IS30 family K07482 K07482; transposase, IS30 family
D R2APBS1_2749 transposase K07483 K07483; transposase
D R2APBS1_0242 transposase K07484 K07484; transposase
D R2APBS1_0243 transposase K07484 K07484; transposase
D R2APBS1_1321 transposase family protein K07485 K07485; transposase
D R2APBS1_3205 transposase K07486 K07486; transposase
D R2APBS1_1566 transposase K07491 rayT; REP-associated tyrosine transposase
D R2APBS1_2541 transposase K07491 rayT; REP-associated tyrosine transposase
D R2APBS1_2544 transposase K07491 rayT; REP-associated tyrosine transposase
D R2APBS1_2546 transposase K07491 rayT; REP-associated tyrosine transposase
D R2APBS1_2548 transposase K07491 rayT; REP-associated tyrosine transposase
D R2APBS1_2750 transposase K07497 K07497; putative transposase
D R2APBS1_2810 Mu DNA binding, I gamma subdomain/Mu transposase, C-terminal/Mu DNA-binding domain/Bacteriophage Mu transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D R2APBS1_1435 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D R2APBS1_1113 gamma-aminobutyrate permease-like transporter K03293 TC.AAT; amino acid transporter, AAT family
D R2APBS1_3197 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D R2APBS1_3297 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D R2APBS1_1379 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D R2APBS1_1380 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D R2APBS1_3627 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D R2APBS1_0789 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D R2APBS1_0603 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family
D R2APBS1_1391 amino acid/peptide transporter (peptide:H symporter) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D R2APBS1_0533 amino acid/peptide transporter (peptide:H symporter) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D R2APBS1_0534 amino acid/peptide transporter (peptide:H symporter) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D R2APBS1_0892 amino acid/peptide transporter (peptide:H symporter) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D R2APBS1_3115 phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D R2APBS1_3819 phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D R2APBS1_0663 membrane protein involved in the export of O-antigen and teichoic acid K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D R2APBS1_3527 membrane-bound metallopeptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D R2APBS1_3829 membrane protein required for beta-lactamase induction K03807 ampE; AmpE protein
D R2APBS1_1530 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D R2APBS1_0206 anti-ECFsigma factor, ChrR K07167 chrR; putative transcriptional regulator
D R2APBS1_2952 phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D R2APBS1_2601 PhoH family protein K07175 phoH2; PhoH-like ATPase
D R2APBS1_2686 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D R2APBS1_2176 periplasmic chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D R2APBS1_0951 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D R2APBS1_3354 surface lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D R2APBS1_2381 outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D R2APBS1_2280 metalloendopeptidase-like membrane protein K06194 nlpD; lipoprotein NlpD
D R2APBS1_3914 putative salt-induced outer membrane protein K07283 ydiY; putative salt-induced outer membrane protein
D R2APBS1_1438 starvation-inducible outer membrane lipoprotein K07285 slp; outer membrane lipoprotein
D R2APBS1_1284 starvation-inducible outer membrane lipoprotein K07285 slp; outer membrane lipoprotein
D R2APBS1_1305 uncharacterized protein involved in outer membrane biogenesis K07290 yhjG; AsmA family protein
D R2APBS1_0824 membrane protein implicated in regulation of membrane protease activity K07340 ybbJ; inner membrane protein
D R2APBS1_2058 multidrug resistance efflux pump K01993 ABC-2.TX; HlyD family secretion protein
D R2APBS1_2950 multidrug resistance efflux pump K01993 ABC-2.TX; HlyD family secretion protein
D R2APBS1_2359 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D R2APBS1_0805 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D R2APBS1_1214 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D R2APBS1_3149 Inner membrane protein involved in colicin E2 resistance K06143 creD; inner membrane protein
D R2APBS1_2396 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D R2APBS1_2399 uncharacterized protein involved in biosynthesis of c-type cytochromes K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D R2APBS1_2400 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D R2APBS1_1774 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D R2APBS1_1598 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D R2APBS1_1860 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D R2APBS1_3822 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D R2APBS1_2067 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D R2APBS1_2105 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D R2APBS1_0345 uncharacterized protein involved in tolerance to divalent cations K03926 cutA; periplasmic divalent cation tolerance protein
D R2APBS1_2221 uncharacterized protein involved in copper resistance K06201 cutC; copper homeostasis protein
D R2APBS1_3257 uncharacterized protein affecting Mg2+/Co2+ transport K06195 apaG; ApaG protein
D R2APBS1_2772 nitrous oxidase accessory protein K07218 nosD; nitrous oxidase accessory protein
D R2APBS1_1713 uncharacterized protein involved in copper resistance K07233 pcoB; copper resistance protein B
D R2APBS1_1289 uncharacterized protein involved in copper resistance K07233 pcoB; copper resistance protein B
D R2APBS1_0541 uncharacterized protein involved in response to NO K07234 K07234; uncharacterized protein involved in response to NO
D R2APBS1_2775 putative lipoprotein involved in nitrous oxide reduction K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D R2APBS1_1418 putative membrane protein, required for colicin V production K03558 cvpA; membrane protein required for colicin V production
D R2APBS1_1132 qaraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D R2APBS1_2740 putative cation transport regulator K06197 chaB; cation transport regulator
D R2APBS1_0850 putative periplasmic or secreted lipoprotein K04065 osmY; hyperosmotically inducible periplasmic protein
D R2APBS1_1803 EMAP domain-containing protein K06878 K06878; tRNA-binding protein
D R2APBS1_0546 truncated hemoglobin K06886 glbN; hemoglobin
D R2APBS1_1849 truncated hemoglobin K06886 glbN; hemoglobin
D R2APBS1_2078 truncated hemoglobin K06886 glbN; hemoglobin
D R2APBS1_2094 truncated hemoglobin K06886 glbN; hemoglobin
D R2APBS1_1308 truncated hemoglobin K06886 glbN; hemoglobin
D R2APBS1_3917 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D R2APBS1_2302 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D R2APBS1_0025 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D R2APBS1_3806 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D R2APBS1_0466 putative HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D R2APBS1_3826 Iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D R2APBS1_1074 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D R2APBS1_1076 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D R2APBS1_0944 putative membrane protein K07058 K07058; membrane protein
D R2APBS1_1422 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D R2APBS1_1200 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE
D R2APBS1_3670 putative sulfurtransferase K07146 K07146; UPF0176 protein
D R2APBS1_1605 uncharacterized protein involved in purine metabolism K07153 hflD; high frequency lysogenization protein
D R2APBS1_2303 hypothetical protein K04750 phnB; PhnB protein
D R2APBS1_1407 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D R2APBS1_1733 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D R2APBS1_2728 putative membrane protein K02351 K02351; putative membrane protein
D R2APBS1_0600 hypothetical protein K03744 lemA; LemA protein
D R2APBS1_0894 hypothetical protein K03744 lemA; LemA protein
D R2APBS1_2245 hypothetical protein K03745 slyX; SlyX protein
D R2APBS1_1417 hypothetical protein K03749 dedD; DedD protein
D R2APBS1_1130 putative paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D R2APBS1_1131 putative paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D R2APBS1_2880 putative membrane protein K08984 yjdF; putative membrane protein
D R2APBS1_0629 putative membrane protein K08987 K08987; putative membrane protein
D R2APBS1_0125 putative outer membrane protein K08995 K08995; putative membrane protein
D R2APBS1_3522 hypothetical protein K09858 K09858; SEC-C motif domain protein
D R2APBS1_3686 hypothetical protein K09914 K09914; putative lipoprotein
D R2APBS1_2475 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D R2APBS1_0269 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein
D R2APBS1_0895 beta-propeller domain-containing protein, methanol dehydrogenase K06872 K06872; uncharacterized protein
D R2APBS1_3246 GTPase of unknown function K06883 K06883; uncharacterized protein
D R2APBS1_0503 phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D R2APBS1_0485 phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D R2APBS1_1755 putative Fe-S protein K06938 K06938; uncharacterized protein
D R2APBS1_3940 putative Fe-S oxidoreductase K06940 K06940; uncharacterized protein
D R2APBS1_1153 putative Fe-S oxidoreductase K06940 K06940; uncharacterized protein
D R2APBS1_2428 putative Fe-S oxidoreductase K06940 K06940; uncharacterized protein
D R2APBS1_0202 putative NAD/FAD-binding protein K06954 K06954; uncharacterized protein
D R2APBS1_1142 putative acetyltransferase K06975 K06975; uncharacterized protein
D R2APBS1_2735 putative acetyltransferase, GNAT superfamily K06977 K06977; uncharacterized protein
D R2APBS1_0446 putative acetyltransferase, GNAT superfamily K06977 K06977; uncharacterized protein
D R2APBS1_2514 putative methyltransferase K06983 K06983; uncharacterized protein
D R2APBS1_0043 putative dioxygenase of extradiol dioxygenase family K06991 K06991; uncharacterized protein
D R2APBS1_3749 putative hydrolase of the alpha/beta superfamily K07018 K07018; uncharacterized protein
D R2APBS1_0038 putative hydrolase of the alpha/beta-hydrolase fold protein K07019 K07019; uncharacterized protein
D R2APBS1_3934 yecA family protein K07039 K07039; uncharacterized protein
D R2APBS1_1152 putative metalloprotease K07054 K07054; uncharacterized protein
D R2APBS1_1498 putative permease K07090 K07090; uncharacterized protein
D R2APBS1_3393 putative permease K07090 K07090; uncharacterized protein
D R2APBS1_3222 SET domain-containing protein K07117 K07117; uncharacterized protein
D R2APBS1_0096 putative NADH-flavin reductase K07118 K07118; uncharacterized protein
D R2APBS1_1703 putative NADH-flavin reductase K07118 K07118; uncharacterized protein
D R2APBS1_3280 putative lipoprotein K07121 K07121; uncharacterized protein
D R2APBS1_2130 short-chain dehydrogenase of unknown substrate specificity K07124 K07124; uncharacterized protein
D R2APBS1_2342 TonB family protein K07126 K07126; uncharacterized protein
D R2APBS1_3514 FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D R2APBS1_0379 peptidase S16, lon domain protein K07157 K07157; uncharacterized protein
D R2APBS1_1197 hypothetical protein K08998 K08998; uncharacterized protein
D R2APBS1_0387 hypothetical protein K09005 K09005; uncharacterized protein
D R2APBS1_0292 hypothetical protein K09117 K09117; uncharacterized protein
D R2APBS1_2747 hypothetical protein K09137 K09137; uncharacterized protein
D R2APBS1_0403 hypothetical protein K09158 K09158; uncharacterized protein
D R2APBS1_2584 hypothetical protein K09164 K09164; uncharacterized protein
D R2APBS1_0201 hypothetical protein K09701 K09701; uncharacterized protein
D R2APBS1_1673 hypothetical protein K09780 K09780; uncharacterized protein
D R2APBS1_0456 hypothetical protein K09790 K09790; uncharacterized protein
D R2APBS1_0481 hypothetical protein K09793 K09793; uncharacterized protein
D R2APBS1_0564 hypothetical protein K09794 K09794; uncharacterized protein
D R2APBS1_1831 hypothetical protein K09801 K09801; uncharacterized protein
D R2APBS1_1133 hypothetical protein K09857 K09857; uncharacterized protein
D R2APBS1_3373 hypothetical protein K09895 K09895; uncharacterized protein
D R2APBS1_0270 hypothetical protein K09902 K09902; uncharacterized protein
D R2APBS1_1282 hypothetical protein K09912 K09912; uncharacterized protein
D R2APBS1_2244 hypothetical protein K09912 K09912; uncharacterized protein
D R2APBS1_2180 hypothetical protein K09919 K09919; uncharacterized protein
D R2APBS1_2252 hypothetical protein K09920 K09920; uncharacterized protein
D R2APBS1_3952 hypothetical protein K09921 K09921; uncharacterized protein
D R2APBS1_2573 hypothetical protein K09924 K09924; uncharacterized protein
D R2APBS1_2669 hypothetical protein K09927 K09927; uncharacterized protein
D R2APBS1_1858 hypothetical protein K09930 K09930; uncharacterized protein
D R2APBS1_3810 hypothetical protein K09930 K09930; uncharacterized protein
D R2APBS1_2069 hypothetical protein K09930 K09930; uncharacterized protein
D R2APBS1_2103 hypothetical protein K09930 K09930; uncharacterized protein
D R2APBS1_3818 hypothetical protein K09931 K09931; uncharacterized protein
D R2APBS1_1564 hypothetical protein K09937 K09937; uncharacterized protein
D R2APBS1_3122 hypothetical protein K09938 K09938; uncharacterized protein
D R2APBS1_1019 hypothetical protein K09940 K09940; uncharacterized protein
D R2APBS1_2427 hypothetical protein K09941 K09941; uncharacterized protein
D R2APBS1_0544 hypothetical protein K09943 K09943; uncharacterized protein
D R2APBS1_0041 hypothetical protein K09954 K09954; uncharacterized protein
D R2APBS1_3108 hypothetical protein K09964 K09964; uncharacterized protein
D R2APBS1_2754 hypothetical protein K09973 K09973; uncharacterized protein
D R2APBS1_3518 hypothetical protein K09975 K09975; uncharacterized protein
D R2APBS1_2229 hypothetical protein K09978 K09978; uncharacterized protein
D R2APBS1_3512 hypothetical protein K09983 K09983; uncharacterized protein
D R2APBS1_1796 hypothetical protein K09990 K09990; uncharacterized protein
D R2APBS1_3116 phosphate transport regulator related to PhoU K07220 K07220; uncharacterized protein
D R2APBS1_0351 putative nucleoside-diphosphate-sugar epimerase K07276 K07276; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024