+C Peptidases and inhibitors KO
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Peptidases and Inhibitors - Cupriavidus metallidurans
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AAspartic peptidases
B Family A1: pepsin family
B Family A2: retropepsin family
B Family A5: thermopsin family
B Family A8: signal peptidase II family
C Rmet_2304 pbrC2; prolipoprotein signal peptidase (signal peptidase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
C Rmet_2886 lspA; prolipoprotein signal peptidase (signal peptidase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
C Rmet_5948 pbrB_C; undecaprenyl pyrophosphate phosphatase/lipoprotein signal peptidase involved in Pb(II) resistance PbrB/C K03101 lspA; signal peptidase II [EC:3.4.23.36]
B Family A22: presenilin family
B Family A24: type IV prepilin peptidase family
C Rmet_3110 pilD; Type IV pilus prepilin leader peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C Rmet_0650 cpaA1; flp pilus assembly leader peptidase CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
B Family A25: gpr protease family
B Family A26: omptin family
B Family A28
B Family A31: HybD endopeptidase family
C Rmet_1293 hoxM; HoxM protein involved in processing of HyaA and HyaB proteins Hydrolase; Nickel Metalloprotease; (belongs to CMGI-2)Protease Absolutely required for hydrogenase activity K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
B Family A36
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ACysteine peptidases
B Family C1: papain family
B Family C2: calpain family
B Family C3: picornain family
B Family C4: NIa protease family
B Family C5
B Family C9
B Family C10: streptopain family
B Family C11: clostripain family
B Family C12: ubiquitin C-terminal hydrolase family
B Family C13: legumain family
B Family C14: caspase family
B Family C15: pyroglutamyl peptidase I family
C Rmet_0067 pcp1; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
B Family C16
B Family C19: ubiquitin-specific protease family
B Family C25: gingipain family
B Family C26: gamma-glutamyl hydrolase family
C Rmet_1463 guaA; GMP synthetase (glutamine aminotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
C Rmet_1579 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
C Rmet_5760 peptidase C26 K07010 K07010; putative glutamine amidotransferase
B Family C27
B Family C30
B Family C37
B Family C39
B Family C40
B Family C44
C Rmet_2460 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C Rmet_3263 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
C Rmet_0187 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
B Family C45
B Family C46: hedgehog family
B Family C47: staphopain family
B Family C48: Ulp1 endopeptidase family
B Family C50: separase family
B Family C54: Aut2 peptidase family
B Family C55: YopJ protease family
B Family C56: PfpI endopeptidase family
C Rmet_0310 putative intracellular protease/amidase/DJ-1/PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
B Family C57: vaccinia virus I7 peptidase family
B Family C58
B Family C59
B Family C60
B Family C63
B Family C64
B Family C65
B Family C67
B Family C69
B Family C70
B Family C75
B Family C76
B Family C78
B Family C79
B Family C82
C Rmet_3815 conserved hypothetical protein (peptidoglycan-binding domain) K21470 ycbB; L,D-transpeptidase YcbB
B Family C83
B Family C85
B Family C86
B Family C88
B Family C89
B Family C97
B Family C98
B Family C110
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AGlutamic peptidases
B Family G1
B Family G4
B Family G5: prenyl protease 2 family
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AMetallo peptidases
B Family M1
C Rmet_0876 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
B Family M2
B Family M3
C Rmet_1191 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
B Family M4: thermolysin family
B Family M5: mycolysin family
B Family M6: immune inhibitor A family
B Family M7: snapalysin family
B Family M8: leishmanolysin family
B Family M9
B Family M10
B Family M12: astacin/adamalysin family
B Family M13: neprilysin family
B Family M14: carboxypeptidase A family
B Family M15: zinc D-Ala-D-Ala carboxypeptidase family
B Family M16: pitrilysin family
C Rmet_5911 peptidase M16-like protein, possible Zn-dependent K07263 pqqL; zinc protease [EC:3.4.24.-]
C Rmet_0282 Peptidase M16-like protein (Zn-dependent peptidase) K07263 pqqL; zinc protease [EC:3.4.24.-]
C Rmet_0283 Peptidase M16-like protein (Probable peptidase signal peptide protein) K07263 pqqL; zinc protease [EC:3.4.24.-]
B Family M17: leucyl aminopeptidase family
C Rmet_2807 pepA; aminopeptidase A, a cyteinylglycinase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B Family M18
B Family M19: membrane dipeptidase family
B Family M20
C Rmet_0024 Carboxypeptidase G2 precursor (CPDG2) K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
C Rmet_4870 glutamate carboxypeptidase, metallopeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
C Rmet_1420 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C Rmet_3696 peptidase M20 K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
C Rmet_4507 hipO; Hippurate hydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
C Rmet_5222 hipO; Hippurate hydrolase (Hippuricase) (Benzoylglycine amidohydrolase) K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
C Rmet_0021 putative peptidase, M20D subfamily K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
C Rmet_3443 N-carbamoyl-L-amino-acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
C Rmet_1945 amidase, hydantoinase/carbamoylase (family) K02083 allC; allantoate deiminase [EC:3.5.3.9]
B Family M23
B Family M24
C Rmet_1434 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
C Rmet_5054 putative metalloprotease/Xaa-Pro dipeptidase type M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
C Rmet_0432 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
B Family M26
B Family M27
B Family M28: aminopeptidase Y family
B Family M29: aminopeptidase T family
B Family M32: carboxypeptidase Taq family
B Family M34: anthrax lethal factor family
B Family M35: deuterolysin family
B Family M36: fungalysin family
B Family M38: beta-aspartyl dipeptidase family
B Family M41: FtsH endopeptidase family
C Rmet_2188 ftsH; protease, ATP-dependent zinc-metallo K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
B Family M42: glutamyl aminopeptidase family
B Family M43: cytophagalysin family
B Family M44
B Family M48: Ste24 endopeptidase family
C Rmet_2575 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C Rmet_3464 htpX; membrane-associated Zn-dependent endopeptidase; self-cleaved K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
C Rmet_3563 putative peptidase, heat-shock-like (M48 family) K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
C Rmet_2849 yggG; Peptidase M48, Ste24p K07387 K07387; metalloprotease [EC:3.4.24.-]
C Rmet_0487 zinc metalloprotease, peptidase family M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
B Family M49: dipeptidyl-peptidase III family
B Family M50: S2P protease family
C Rmet_1442 yaeL; zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
C Rmet_5411 putative membrane Zinc metallopeptidase, M50 family K16922 yydH; putative peptide zinc metalloprotease protein
B Family M54
B Family M55: DppA aminopeptidase family
C Rmet_1412 dppA; D-aminopeptidase M55 K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
B Family M56
B Family M67
B Family M72
B Family M73
B Family M74
B Family M80
B Family M82
B Family M85
B Family M88
B Family M90
C Rmet_2136 conserved hypothetical protein K09933 mtfA; MtfA peptidase
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AAsparagine peptide lyases
B Family N1
B Family N8
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AMixed peptidases
B Family P1: DmpA aminopeptidase family
C Rmet_1411 dmpA; D-Aminopeptidase S58 K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
B Family P2
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ASerine peptidases
B Family S1: chymotrypsin family
C Rmet_2422 mucD; Trypsin-like serine protease, typically periplasmic, contains C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
C Rmet_3620 degP; multifunctional enzyme (serine-type endopeptidase / oxidoreductase) (degP / mucD-like) K04771 degP; serine protease Do [EC:3.4.21.107]
C Rmet_3233 Trypsin-like serine protease (contains C-terminal PDZ domain) K04772 degQ; serine protease DegQ [EC:3.4.21.-]
B Family S3: togavirin family
B Family S6
B Family S7: flavivirin family
B Family S8: subtilisin family
C Rmet_0996 Peptidase S8 and S53, subtilisin, kexin, sedolisin precursor K14645 K14645; serine protease [EC:3.4.21.-]
C Rmet_5741 serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-]
B Family S9: prolyl oligopeptidase family
B Family S10
B Family S11: D-Ala-D-Ala carboxypeptidase A family
C Rmet_0225 dac; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C Rmet_1204 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
B Family S12: D-Ala-D-Ala carboxypeptidase B family
B Family S13: D-Ala-D-Ala peptidase C family
C Rmet_0508 dacB; D-Alanyl-D-alanine carboxypeptidase, S13 family K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
B Family S14: ClpP endopeptidase family
C Rmet_1885 clpP; proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
B Family S15
B Family S16: lon protease family
C Rmet_1883 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
B Family S21: assemblin family
B Family S24: LexA family
C Rmet_1981 lexA; DNA-binding transcriptional repressor of SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
B Family S26: signal peptidase I family
C Rmet_2420 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
B Family S28
B Family S31
B Family S32
B Family S33
C Rmet_4027 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C Rmet_4328 alpha/beta hydrolase fold protein K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
B Family S41: C-terminal processing peptidase family
C Rmet_0250 ctpA; C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
B Family S45
C Rmet_5635 penicillin amidase (peptidase S45) K01434 pac; penicillin G amidase [EC:3.5.1.11]
C Rmet_1578 penicillin amidase or acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
B Family S49: protease IV family
C Rmet_2436 sohB; Peptidase S49, periplasmic serine protease (ClpP class) K04773 sppA; protease IV [EC:3.4.21.-]
B Family S50
B Family S51
B Family S53
B Family S54: Rhomboid family
B Family S55: SpoIVB peptidase family
B Family S62
B Family S66
C Rmet_1574 ldcA; L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
B Family S77: phage prohead processing peptidase family
B Family S78
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AThreonine peptidases
B Family T1: proteasome family
C Rmet_0131 hslV; peptidase component of the HslUV protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
C Rmet_1198 Putative 20S proteasome, A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
B Family T2
C Rmet_1406 ansB; isoaspartyl dipeptidase with L-asparaginase activity K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
B Family T3: gamma-glutamyltransferase family
C Rmet_0822 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C Rmet_0970 ggt; Gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C Rmet_1957 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C Rmet_4046 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
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APeptidases of unknown catalytic type
B Family U32
C Rmet_4939 protease; peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
C Rmet_4940 protease; peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
B Family U62
C Rmet_2570 pmbA; peptidase required for the maturation and secretion of the antibiotic peptide MccB17 K03592 pmbA; PmbA protein
C Rmet_0991 tldD; Peptidase K03568 tldD; TldD protein
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APeptidase inhibitors
B Family I1: Kazal family
B Family I2: Kunitz - BPTI family
B Family I4: serpin family
B Family I11: ecotin family
B Family I17: WAP-type family
B Family I25: cystatin family
B Family I27: calpastatin family
B Family I32: IAP family
B Family I34: IA3 family
B Family I35: timp family
B Family I39: alpha2M family
C Rmet_3531 large extracellular alpha-helicalprotein K06894 yfhM; alpha-2-macroglobulin
B Family I47: latexin family
B Family I49: proSAAS family
B Family I51: IC family
B Family I57: staphostatin B family
B Family I63
B Family I80
B Family I87
C Rmet_2098 hflC; modulator for HflB protease specific for phage lambda cII repressor K04087 hflC; modulator of FtsH protease HflC
C Rmet_2099 hflK; modulator for HflB protease specific for phage lambda cII repressor K04088 hflK; modulator of FtsH protease HflK
B Family I93
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: December 13, 2023
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Classification taken and modified from MEROPS