+D GENES KO
#
KEGG Orthology (KO) - Roseiflexus sp. RS-1
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rrs00010]
D RoseRS_2512 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_3170 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_2764 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_4356 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RoseRS_2734 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RoseRS_1831 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_1829 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_4187 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RoseRS_4129 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RoseRS_2049 D-fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D RoseRS_3813 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RoseRS_1851 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RoseRS_0387 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RoseRS_1473 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RoseRS_1012 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RoseRS_0822 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RoseRS_4532 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RoseRS_1428 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RoseRS_1064 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RoseRS_2952 Transketolase, central region K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RoseRS_1728 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RoseRS_1727 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RoseRS_1726 Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_1213 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RoseRS_1370 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1369 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_1552 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_0752 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RoseRS_3921 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_2004 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_2003 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_4534 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RoseRS_2311 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RoseRS_2496 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RoseRS_4113 glycoside hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:rrs00020]
D RoseRS_3488 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RoseRS_0235 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RoseRS_0785 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RoseRS_3396 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RoseRS_3397 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_1370 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1369 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_1552 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_1368 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RoseRS_1371 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RoseRS_3250 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RoseRS_3930 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RoseRS_2399 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RoseRS_2398 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RoseRS_2400 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RoseRS_3341 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RoseRS_0253 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RoseRS_2496 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RoseRS_2952 Transketolase, central region K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RoseRS_1728 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RoseRS_1727 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RoseRS_1726 Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RoseRS_1213 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:rrs00030]
D RoseRS_4356 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RoseRS_2562 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RoseRS_4286 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RoseRS_1777 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RoseRS_4614 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RoseRS_4615 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RoseRS_2910 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RoseRS_1083 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RoseRS_3216 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RoseRS_3280 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RoseRS_1580 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D RoseRS_4537 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RoseRS_4394 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RoseRS_0965 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RoseRS_4253 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D RoseRS_2498 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RoseRS_3585 carbohydrate kinase, FGGY K25031 gntK; gluconokinase [EC:2.7.1.12]
D RoseRS_3696 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RoseRS_4359 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D RoseRS_1997 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RoseRS_2049 D-fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D RoseRS_4187 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RoseRS_4129 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RoseRS_2734 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RoseRS_1831 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_1829 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rrs00040]
D RoseRS_2268 Cupin 2, conserved barrel domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D RoseRS_0498 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D RoseRS_1617 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RoseRS_1229 Xylose isomerase domain protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RoseRS_1777 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RoseRS_2596 carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D RoseRS_2886 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RoseRS_4551 carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D RoseRS_2884 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RoseRS_2732 carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RoseRS_1581 Rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D RoseRS_0888 protein of unknown function DUF1498 K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D RoseRS_4454 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RoseRS_0829 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D RoseRS_4193 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:rrs00051]
D RoseRS_3455 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RoseRS_3802 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RoseRS_2652 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_4124 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_0222 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_4397 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D RoseRS_1852 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RoseRS_3884 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RoseRS_3928 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RoseRS_3434 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D RoseRS_2815 Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D RoseRS_2730 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D RoseRS_2732 carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RoseRS_1581 Rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D RoseRS_2734 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RoseRS_1831 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_1829 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_4187 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RoseRS_4129 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RoseRS_4454 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RoseRS_2884 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RoseRS_2049 D-fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D RoseRS_3813 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RoseRS_1853 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RoseRS_3655 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RoseRS_4076 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00052 Galactose metabolism [PATH:rrs00052]
D RoseRS_2311 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RoseRS_3819 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RoseRS_2890 UTP-hexose-1-phosphate uridylyltransferase / UDP-glucose-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RoseRS_3828 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RoseRS_1509 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_2395 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_4100 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_0081 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_3869 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_2512 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_3170 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_2764 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_2714 beta-galactosidase. Glycosyl Hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RoseRS_2891 alpha-galactosidase. Glycosyl Hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RoseRS_1356 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RoseRS_1360 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RoseRS_2734 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RoseRS_1831 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_1829 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_1830 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D RoseRS_3310 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RoseRS_1931 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rrs00053]
D RoseRS_1617 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RoseRS_2498 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RoseRS_3434 Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D RoseRS_3581 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RoseRS_0359 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RoseRS_1229 Xylose isomerase domain protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rrs00500]
D RoseRS_3310 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RoseRS_1931 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RoseRS_3480 glycoside hydrolase, family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RoseRS_3614 beta-glucosidase. Glycosyl Hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RoseRS_2967 glycoside hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RoseRS_4113 glycoside hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RoseRS_2384 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RoseRS_3699 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RoseRS_3698 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RoseRS_1081 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D RoseRS_3472 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_0506 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_0846 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_1065 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_1630 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_3734 glycoside hydrolase, family 57 K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RoseRS_4181 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RoseRS_0014 alpha amylase, catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RoseRS_1712 alpha amylase, catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D RoseRS_1575 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RoseRS_3111 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RoseRS_0138 alpha amylase, catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D RoseRS_0827 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RoseRS_2512 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_3170 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_2764 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_4356 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RoseRS_3455 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rrs00520]
D RoseRS_3616 glycoside hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RoseRS_3455 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RoseRS_4064 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RoseRS_2367 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RoseRS_4393 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RoseRS_0212 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RoseRS_3790 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RoseRS_1977 N-acylglucosamine 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D RoseRS_1131 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RoseRS_2396 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D RoseRS_2681 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RoseRS_1724 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D RoseRS_4429 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D RoseRS_4430 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D RoseRS_3514 Alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RoseRS_2512 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_3170 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_2764 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_1617 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RoseRS_0861 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RoseRS_3819 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RoseRS_2890 UTP-hexose-1-phosphate uridylyltransferase / UDP-glucose-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RoseRS_3828 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RoseRS_1509 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_2395 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_4100 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_0081 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_3869 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_3581 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RoseRS_0359 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RoseRS_4356 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RoseRS_3802 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RoseRS_2652 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_4124 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_0222 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_4397 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D RoseRS_1852 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RoseRS_3884 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RoseRS_3928 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RoseRS_1853 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RoseRS_3655 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RoseRS_4076 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RoseRS_3652 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RoseRS_4166 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RoseRS_2384 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RoseRS_3699 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RoseRS_3698 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rrs00620]
D RoseRS_2004 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_2003 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_1213 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RoseRS_1370 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1369 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_1552 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_2952 Transketolase, central region K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RoseRS_1728 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RoseRS_1727 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RoseRS_1726 Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_2572 Semialdehyde dehydrogenase, NAD - binding K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D RoseRS_0752 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RoseRS_3921 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RoseRS_1428 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RoseRS_0393 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RoseRS_3200 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RoseRS_3172 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RoseRS_3203 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RoseRS_2908 biotin carboxylase domain protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RoseRS_3199 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RoseRS_0392 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RoseRS_3603 acetyl-CoA carboxylase, biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RoseRS_0311 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_4534 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RoseRS_4355 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D RoseRS_1612 D-lactate dehydrogenase (cytochrome) K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RoseRS_3957 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RoseRS_2738 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RoseRS_3215 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D RoseRS_2286 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RoseRS_3704 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RoseRS_3692 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RoseRS_0253 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RoseRS_3341 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RoseRS_2753 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RoseRS_3110 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RoseRS_2496 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RoseRS_1064 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RoseRS_4165 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_1965 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RoseRS_1963 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rrs00630]
D RoseRS_4164 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RoseRS_2004 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_2003 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_4165 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RoseRS_0253 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RoseRS_3488 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RoseRS_0235 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_0480 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RoseRS_4172 MaoC domain protein dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D RoseRS_4173 L-erythro-3-methylmalyl-CoA lyase / L-malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RoseRS_3603 acetyl-CoA carboxylase, biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RoseRS_0545 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_0544 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_2024 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RoseRS_0214 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RoseRS_3360 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RoseRS_3362 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RoseRS_4473 protein of unknown function DUF224, cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RoseRS_3607 protein of unknown function DUF224, cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RoseRS_0216 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D RoseRS_3764 Haloacid dehalogenase domain protein hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RoseRS_2985 glutamate synthase (NADPH) large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D RoseRS_1047 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2715 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2983 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_0389 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RoseRS_1524 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RoseRS_1522 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RoseRS_1526 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_1525 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RoseRS_1997 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:rrs00640]
D RoseRS_2004 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_2003 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_4534 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RoseRS_2415 branched-chain alpha-keto acid dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RoseRS_2416 branched-chain alpha-keto acid dehydrogenase E1 component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RoseRS_1675 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_3205 Alcohol dehydrogenase, zinc-binding domain protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RoseRS_0393 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RoseRS_3200 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RoseRS_3172 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RoseRS_3203 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RoseRS_2908 biotin carboxylase domain protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RoseRS_3199 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RoseRS_0392 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RoseRS_3603 acetyl-CoA carboxylase, biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RoseRS_3201 malonyl-coenzyme A reductase (NADP) / malonate semialdehyde reductase K14468 mcr; malonyl-CoA reductase / 3-hydroxypropionate dehydrogenase (NADP+) [EC:1.2.1.75 1.1.1.298]
D RoseRS_1738 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_3926 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_4570 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RoseRS_0480 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RoseRS_0545 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_0544 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_2024 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RoseRS_0214 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RoseRS_3930 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RoseRS_3250 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RoseRS_1706 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:rrs00650]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_2970 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RoseRS_2302 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RoseRS_3886 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D RoseRS_2572 Semialdehyde dehydrogenase, NAD - binding K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D RoseRS_4553 alpha/beta hydrolase fold K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RoseRS_3692 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RoseRS_3693 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RoseRS_2399 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RoseRS_2398 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RoseRS_2400 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RoseRS_1738 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_3926 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_4570 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RoseRS_0911 acetyl-CoA hydrolase/transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]
D RoseRS_1213 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RoseRS_1370 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1369 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_1552 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_0430 putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D RoseRS_4162 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RoseRS_1953 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RoseRS_2777 beta-lactamase K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114]
D RoseRS_1968 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RoseRS_1967 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rrs00660]
D RoseRS_1968 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RoseRS_1967 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RoseRS_3930 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RoseRS_3250 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RoseRS_4176 succinyl-CoA:L-malate CoA transferase subunit A K14471 smtA1; succinyl-CoA:(S)-malate CoA-transferase subunit A [EC:2.8.3.22]
D RoseRS_4175 succinyl-CoA:L-malate CoA transferase subunit B K14472 smtB; succinyl-CoA:(S)-malate CoA-transferase subunit B [EC:2.8.3.22]
D RoseRS_4173 L-erythro-3-methylmalyl-CoA lyase / L-malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RoseRS_4172 MaoC domain protein dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D RoseRS_1961 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RoseRS_1960 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RoseRS_1958 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rrs00562]
D RoseRS_1153 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RoseRS_3316 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RoseRS_0382 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RoseRS_0499 Myo-inositol catabolism IolB domain protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D RoseRS_3813 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rrs00190]
D RoseRS_2989 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RoseRS_3678 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RoseRS_3677 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RoseRS_2990 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RoseRS_2991 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RoseRS_3676 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RoseRS_3675 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RoseRS_2992 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RoseRS_3674 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RoseRS_2238 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RoseRS_2237 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RoseRS_2994 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RoseRS_2236 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RoseRS_2235 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RoseRS_2993 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RoseRS_2995 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RoseRS_2234 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RoseRS_2233 NADH-ubiquinone oxidoreductase, chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RoseRS_2996 NADH-ubiquinone oxidoreductase, chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RoseRS_2232 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RoseRS_2997 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RoseRS_2998 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RoseRS_2999 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RoseRS_2231 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RoseRS_2230 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RoseRS_3000 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RoseRS_3543 NADH dehydrogenase (ubiquinone), 24 kDa subunit K05586 hoxE; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D RoseRS_3542 NADH dehydrogenase (quinone) K05587 hoxF; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D RoseRS_3541 ferredoxin K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D RoseRS_2399 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RoseRS_2398 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RoseRS_2400 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RoseRS_0224 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RoseRS_2266 caa(3)-type oxidase, subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D RoseRS_2265 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RoseRS_2264 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RoseRS_0934 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RoseRS_2263 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RoseRS_0933 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RoseRS_4134 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D RoseRS_2484 cytochrome c, class I K08738 CYC; cytochrome c
D RoseRS_1498 cytochrome c, class I K08738 CYC; cytochrome c
D RoseRS_0514 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RoseRS_0512 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RoseRS_0513 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RoseRS_0515 H+-transporting two-sector ATPase, delta (OSCP) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RoseRS_0511 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RoseRS_0518 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RoseRS_0516 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RoseRS_0517 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RoseRS_3220 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RoseRS_3717 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes [PATH:rrs00720]
D RoseRS_1213 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RoseRS_1064 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RoseRS_2753 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RoseRS_3110 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RoseRS_0253 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RoseRS_3341 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RoseRS_2399 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RoseRS_2398 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RoseRS_2400 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RoseRS_3250 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RoseRS_3930 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_1370 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RoseRS_1369 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_1552 thiamine pyrophosphate enzyme domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RoseRS_1368 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RoseRS_1371 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RoseRS_0785 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RoseRS_0235 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RoseRS_0393 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RoseRS_3200 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RoseRS_3172 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RoseRS_3203 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RoseRS_2908 biotin carboxylase domain protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RoseRS_3199 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RoseRS_0392 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RoseRS_3201 malonyl-coenzyme A reductase (NADP) / malonate semialdehyde reductase K14468 mcr; malonyl-CoA reductase / 3-hydroxypropionate dehydrogenase (NADP+) [EC:1.2.1.75 1.1.1.298]
D RoseRS_3202 acrylyl-CoA reductase (NADPH) / 3-hydroxypropionyl-CoA dehydratase / 3-hydroxypropionyl-CoA synthetase K14469 K14469; acrylyl-CoA reductase (NADPH) / 3-hydroxypropionyl-CoA dehydratase / 3-hydroxypropionyl-CoA synthetase [EC:1.3.1.84 4.2.1.116 6.2.1.36]
D RoseRS_4173 L-erythro-3-methylmalyl-CoA lyase / L-malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RoseRS_4172 MaoC domain protein dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D RoseRS_4174 acyl-CoA transferase/carnitine dehydratase-like protein K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3]
D RoseRS_4177 conserved hypothetical protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D RoseRS_3827 Propionyl-CoA carboxylase K15052 K15052; propionyl-CoA carboxylase [EC:6.4.1.3 2.1.3.15]
D RoseRS_0480 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RoseRS_0545 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_0544 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_0214 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RoseRS_2024 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RoseRS_4176 succinyl-CoA:L-malate CoA transferase subunit A K14471 smtA1; succinyl-CoA:(S)-malate CoA-transferase subunit A [EC:2.8.3.22]
D RoseRS_4175 succinyl-CoA:L-malate CoA transferase subunit B K14472 smtB; succinyl-CoA:(S)-malate CoA-transferase subunit B [EC:2.8.3.22]
D RoseRS_0219 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RoseRS_4392 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RoseRS_4575 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RoseRS_2032 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RoseRS_2004 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_2003 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:rrs00680]
D RoseRS_0389 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RoseRS_1997 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RoseRS_4532 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RoseRS_2753 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RoseRS_3110 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RoseRS_0253 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RoseRS_4173 L-erythro-3-methylmalyl-CoA lyase / L-malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RoseRS_2049 D-fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D RoseRS_4187 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RoseRS_4129 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RoseRS_2734 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RoseRS_1831 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_1829 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RoseRS_2964 NADH:flavin oxidoreductase/NADH oxidase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D RoseRS_2004 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_2003 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_1012 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RoseRS_0822 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RoseRS_0271 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RoseRS_2214 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RoseRS_3902 phosphoserine:homoserine phosphotransferase / homoserine kinase / phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D RoseRS_1699 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D RoseRS_4350 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D RoseRS_1139 protein of unknown function DUF121 K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D RoseRS_1138 LPPG:FO 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D RoseRS_1136 coenzyme F420-0 gamma-glutamyl ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
D RoseRS_1053 homoaconitase large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D RoseRS_1056 homoaconitase small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
C 00910 Nitrogen metabolism [PATH:rrs00910]
D RoseRS_1199 nitrogenase component I, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RoseRS_1198 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RoseRS_1201 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D RoseRS_1722 Glu/Leu/Phe/Val dehydrogenase, C terminal K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RoseRS_4385 glutamate dehydrogenase (NADP) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RoseRS_1047 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2715 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2983 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2985 glutamate synthase (NADPH) large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D RoseRS_3687 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rrs00920]
D RoseRS_3336 sulfate adenylyltransferase / adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RoseRS_3754 phosphoesterase, RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D RoseRS_0739 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RoseRS_3958 Uncharacterized NAD(FAD)-dependent dehydrogenase-like protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RoseRS_0717 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_1488 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_0726 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_3035 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RoseRS_1506 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RoseRS_1759 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RoseRS_4472 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RoseRS_1055 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rrs00061]
D RoseRS_0393 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RoseRS_3200 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RoseRS_3172 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RoseRS_3203 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RoseRS_2908 biotin carboxylase domain protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RoseRS_3199 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RoseRS_0392 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RoseRS_3603 acetyl-CoA carboxylase, biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RoseRS_0984 acyl carrier protein K02078 acpP; acyl carrier protein
D RoseRS_3469 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RoseRS_2614 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RoseRS_4603 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_3468 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_3590 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_0750 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_0479 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_2882 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_0987 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1126 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_4552 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_4347 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_2289 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1807 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_3122 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RoseRS_1555 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RoseRS_2094 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0623 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_1007 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_2084 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_4612 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0228 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_3648 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rrs00071]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_2545 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_2969 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_2970 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RoseRS_2971 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RoseRS_2972 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RoseRS_2850 acyl-CoA dehydrogenase domain protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D RoseRS_2094 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0623 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_1007 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_2084 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_4612 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0228 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_3648 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0752 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RoseRS_3921 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rrs00561]
D RoseRS_1997 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_1766 dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D RoseRS_3297 dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D RoseRS_3298 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D RoseRS_1767 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D RoseRS_3302 PTS system fructose subfamily IIA component K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D RoseRS_1768 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RoseRS_3809 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RoseRS_2831 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RoseRS_3595 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RoseRS_2761 Diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RoseRS_2456 Diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RoseRS_2527 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RoseRS_0861 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RoseRS_2891 alpha-galactosidase. Glycosyl Hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RoseRS_1356 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RoseRS_1360 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rrs00564]
D RoseRS_3299 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RoseRS_3300 Glycerol-3-phosphate dehydrogenase K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D RoseRS_3301 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D RoseRS_3809 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RoseRS_2831 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RoseRS_3595 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RoseRS_4126 Glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RoseRS_2014 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RoseRS_1290 Phosphatidylserine decarboxylase-like protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RoseRS_0105 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RoseRS_0118 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RoseRS_2955 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RoseRS_4112 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D RoseRS_3669 UbiA prenyltransferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D RoseRS_3719 transferase hexapeptide repeat containing protein K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:rrs00600]
D RoseRS_2597 Pyridoxal-dependent decarboxylase K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
D RoseRS_1072 Pyridoxal-dependent decarboxylase K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
D RoseRS_2714 beta-galactosidase. Glycosyl Hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RoseRS_2891 alpha-galactosidase. Glycosyl Hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RoseRS_1356 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RoseRS_1360 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RoseRS_3616 glycoside hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rrs00592]
D RoseRS_2545 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_2969 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rrs00230]
D RoseRS_2429 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RoseRS_4537 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RoseRS_4394 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RoseRS_0965 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RoseRS_3743 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RoseRS_2692 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RoseRS_0351 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RoseRS_2693 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RoseRS_1845 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RoseRS_2622 phosphoribosylformylglycinamidine synthase II K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D RoseRS_2554 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RoseRS_1820 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RoseRS_1821 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RoseRS_2552 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RoseRS_0043 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RoseRS_0206 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RoseRS_0741 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RoseRS_0843 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RoseRS_1299 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RoseRS_0321 hypoxanthine phosphoribosyltransferase K15780 tilS-hprT; bifunctional protein TilS/HprT [EC:6.3.4.19 2.4.2.8]
D RoseRS_0697 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RoseRS_0772 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RoseRS_2249 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RoseRS_2132 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RoseRS_3599 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RoseRS_1973 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RoseRS_0289 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RoseRS_4122 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RoseRS_0819 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RoseRS_2694 putative PAS/PAC sensor protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RoseRS_1638 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RoseRS_4214 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RoseRS_0487 PfkB domain protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D RoseRS_0778 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D RoseRS_2867 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RoseRS_1164 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RoseRS_1214 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RoseRS_3336 sulfate adenylyltransferase / adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:rrs00240]
D RoseRS_4057 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RoseRS_4055 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RoseRS_2863 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RoseRS_2862 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RoseRS_4254 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RoseRS_2557 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RoseRS_0764 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D RoseRS_2861 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D RoseRS_1785 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D RoseRS_2860 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RoseRS_1721 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RoseRS_0190 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RoseRS_2017 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RoseRS_0772 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RoseRS_1634 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RoseRS_3115 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RoseRS_0324 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RoseRS_0843 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RoseRS_2457 purine or other phosphorylase, family 1 K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D RoseRS_0581 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RoseRS_2864 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RoseRS_1375 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D RoseRS_4396 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RoseRS_4201 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RoseRS_1973 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RoseRS_0778 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D RoseRS_3232 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RoseRS_3804 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rrs00250]
D RoseRS_0437 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RoseRS_2187 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RoseRS_0104 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RoseRS_2044 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_2461 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_3649 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_4419 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_4439 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_1560 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RoseRS_0909 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RoseRS_4058 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RoseRS_2403 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RoseRS_4214 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RoseRS_0043 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RoseRS_2863 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RoseRS_1738 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_3926 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_4570 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RoseRS_1722 Glu/Leu/Phe/Val dehydrogenase, C terminal K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RoseRS_4385 glutamate dehydrogenase (NADP) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RoseRS_1548 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D RoseRS_1047 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2715 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2983 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_4057 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RoseRS_4055 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RoseRS_1845 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RoseRS_4064 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RoseRS_2367 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RoseRS_3743 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rrs00260]
D RoseRS_2031 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RoseRS_3079 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RoseRS_3078 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RoseRS_2987 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RoseRS_1971 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RoseRS_1892 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D RoseRS_3902 phosphoserine:homoserine phosphotransferase / homoserine kinase / phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D RoseRS_3080 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RoseRS_0389 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RoseRS_1997 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RoseRS_1012 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RoseRS_0822 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RoseRS_0271 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RoseRS_2214 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RoseRS_1699 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D RoseRS_2925 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_2594 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_1524 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RoseRS_1522 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RoseRS_1526 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_1525 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RoseRS_2528 Sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D RoseRS_3319 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RoseRS_1970 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RoseRS_4405 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RoseRS_2950 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RoseRS_2521 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RoseRS_1459 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rrs00270]
D RoseRS_3035 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RoseRS_1506 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RoseRS_0703 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RoseRS_0064 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RoseRS_2516 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RoseRS_0489 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RoseRS_0919 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RoseRS_4588 Spermidine synthase-like protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D RoseRS_3618 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RoseRS_1363 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RoseRS_3664 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D RoseRS_0485 translation initiation factor 2B subunit I family (IF-2BI) K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D RoseRS_4038 Cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D RoseRS_4109 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RoseRS_0488 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RoseRS_2031 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RoseRS_3079 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RoseRS_3078 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RoseRS_2987 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RoseRS_1971 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RoseRS_1759 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RoseRS_4472 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RoseRS_1055 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RoseRS_1758 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RoseRS_1962 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_2544 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_0717 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_1488 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_0726 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_0253 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RoseRS_0720 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D RoseRS_0271 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RoseRS_2214 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rrs00280]
D RoseRS_1962 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_2544 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_2415 branched-chain alpha-keto acid dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RoseRS_2416 branched-chain alpha-keto acid dehydrogenase E1 component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RoseRS_1675 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_2971 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RoseRS_2972 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RoseRS_2545 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_2969 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_3603 acetyl-CoA carboxylase, biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RoseRS_0480 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RoseRS_0545 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_0544 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_2024 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RoseRS_0214 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RoseRS_3990 6-phosphogluconate dehydrogenase, NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RoseRS_1237 6-phosphogluconate dehydrogenase, NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_4570 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RoseRS_0434 3-methylcrotonoyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RoseRS_3825 Enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RoseRS_4162 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RoseRS_1953 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_0430 putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rrs00290]
D RoseRS_3319 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RoseRS_1970 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RoseRS_4405 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RoseRS_1961 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RoseRS_1960 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RoseRS_1958 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RoseRS_1968 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RoseRS_1967 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RoseRS_1966 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RoseRS_3155 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RoseRS_1962 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_2544 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_1560 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RoseRS_1965 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RoseRS_1963 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rrs00300]
D RoseRS_2987 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RoseRS_1971 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RoseRS_2031 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RoseRS_3079 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RoseRS_3078 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RoseRS_3604 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RoseRS_0842 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RoseRS_1704 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RoseRS_0406 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RoseRS_1053 homoaconitase large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D RoseRS_1056 homoaconitase small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
D RoseRS_1057 homoisocitrate dehydrogenase K05824 LYS12; homoisocitrate dehydrogenase [EC:1.1.1.87]
D RoseRS_2027 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RoseRS_0924 aromatic amino acid aminotransferase / 2-aminoadipate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RoseRS_1089 transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RoseRS_1058 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D RoseRS_1049 hypothetical protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D RoseRS_1059 L-2-aminoadipate N-acetyltransferase K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43]
D RoseRS_1062 N-acetylglutamate kinase / N2-acetyl-L-aminoadipate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D RoseRS_1060 N2-acetyl-L-aminoadipate semialdehyde dehydrogenase / N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D RoseRS_2722 acetylornithine aminotransferase / N2-acetyl-L-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D RoseRS_2723 acetylornithine deacetylase / N2-acetyl-L-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
D RoseRS_0794 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RoseRS_3781 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RoseRS_2981 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:rrs00310]
D RoseRS_3397 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4570 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rrs00220]
D RoseRS_2405 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RoseRS_4058 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RoseRS_2403 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RoseRS_4137 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RoseRS_1433 Arginase/agmatinase/formiminoglutamase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RoseRS_1845 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RoseRS_1047 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2715 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2983 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_1722 Glu/Leu/Phe/Val dehydrogenase, C terminal K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RoseRS_4385 glutamate dehydrogenase (NADP) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RoseRS_1560 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RoseRS_4054 N-acetylglutamate synthase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RoseRS_0886 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RoseRS_4059 glutamate N-acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RoseRS_4053 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RoseRS_4052 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RoseRS_0842 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RoseRS_4522 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D RoseRS_1058 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D RoseRS_1049 hypothetical protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D RoseRS_1062 N-acetylglutamate kinase / N2-acetyl-L-aminoadipate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D RoseRS_1060 N2-acetyl-L-aminoadipate semialdehyde dehydrogenase / N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D RoseRS_2722 acetylornithine aminotransferase / N2-acetyl-L-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D RoseRS_2723 acetylornithine deacetylase / N2-acetyl-L-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:rrs00330]
D RoseRS_4325 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RoseRS_2708 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D RoseRS_2839 Orn/DAP/Arg decarboxylase 2 K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RoseRS_3007 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RoseRS_2742 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D RoseRS_2741 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D RoseRS_4588 Spermidine synthase-like protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D RoseRS_3618 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RoseRS_1363 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_2925 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_2594 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_1254 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RoseRS_4137 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RoseRS_1433 Arginase/agmatinase/formiminoglutamase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RoseRS_0390 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RoseRS_1548 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D RoseRS_0762 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RoseRS_0763 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RoseRS_0642 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00340 Histidine metabolism [PATH:rrs00340]
D RoseRS_3180 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RoseRS_0207 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D RoseRS_3192 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RoseRS_3191 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RoseRS_3194 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RoseRS_1120 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RoseRS_3872 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RoseRS_3700 histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D RoseRS_3179 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_2925 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_2594 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:rrs00350]
D RoseRS_3872 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RoseRS_2925 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_2594 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_0752 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RoseRS_3921 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RoseRS_2569 4-hydroxyphenylacetate 3-hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D RoseRS_0320 tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism [PATH:rrs00360]
D RoseRS_2925 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_2594 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_3872 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RoseRS_1254 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RoseRS_0716 Rieske (2Fe-2S) domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D RoseRS_2578 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RoseRS_2573 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RoseRS_2572 Semialdehyde dehydrogenase, NAD - binding K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:rrs00380]
D RoseRS_4470 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D RoseRS_2577 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D RoseRS_3397 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_2925 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_2594 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_1254 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rrs00400]
D RoseRS_2785 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RoseRS_2359 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RoseRS_4545 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RoseRS_3243 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RoseRS_4543 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RoseRS_3657 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RoseRS_1952 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RoseRS_1455 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RoseRS_1454 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RoseRS_1452 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RoseRS_3444 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RoseRS_1252 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RoseRS_2950 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RoseRS_2521 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RoseRS_1459 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RoseRS_2360 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D RoseRS_2023 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RoseRS_1964 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RoseRS_3872 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rrs00410]
D RoseRS_1738 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_3926 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_4570 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_0744 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:rrs00430]
D RoseRS_2169 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RoseRS_3730 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RoseRS_0909 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:rrs00440]
D RoseRS_3836 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D RoseRS_1589 phosphonate metabolism K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D RoseRS_1591 hypothetical protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D RoseRS_1590 Uncharacterized enzyme of phosphonate metabolism-like protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D RoseRS_1586 ABC transporter related K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D RoseRS_1585 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RoseRS_1588 phosphonate metabolism PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:rrs00450]
D RoseRS_4472 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RoseRS_1055 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RoseRS_0703 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RoseRS_0064 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RoseRS_2516 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RoseRS_4038 Cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D RoseRS_0710 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RoseRS_0097 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RoseRS_1191 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RoseRS_3336 sulfate adenylyltransferase / adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RoseRS_2037 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rrs00460]
D RoseRS_3480 glycoside hydrolase, family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RoseRS_3614 beta-glucosidase. Glycosyl Hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RoseRS_2967 glycoside hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RoseRS_2169 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RoseRS_3730 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RoseRS_2187 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RoseRS_0104 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RoseRS_0389 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rrs00470]
D RoseRS_2559 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RoseRS_2981 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D RoseRS_3791 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RoseRS_1845 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RoseRS_1521 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RoseRS_3783 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RoseRS_0406 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RoseRS_0642 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00480 Glutathione metabolism [PATH:rrs00480]
D RoseRS_2169 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RoseRS_3730 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RoseRS_2615 glutamate--cysteine ligase, GCS2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RoseRS_0699 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RoseRS_0785 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RoseRS_4286 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RoseRS_2562 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RoseRS_3106 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RoseRS_4588 Spermidine synthase-like protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D RoseRS_3618 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RoseRS_1363 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rrs00511]
D RoseRS_2714 beta-galactosidase. Glycosyl Hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RoseRS_3616 glycoside hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RoseRS_1434 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RoseRS_1576 beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D RoseRS_1740 glycoside hydrolase family 2, sugar binding K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D RoseRS_2814 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RoseRS_3943 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:rrs00540]
D RoseRS_1655 hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RoseRS_2381 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RoseRS_3171 sugar isomerase (SIS) K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RoseRS_4218 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RoseRS_1374 GHMP kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D RoseRS_4217 GHMP kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D RoseRS_0952 GHMP kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D RoseRS_4268 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:rrs00542]
D RoseRS_4524 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rrs00541]
D RoseRS_1509 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_2395 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_4100 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_0081 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_3869 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RoseRS_1617 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RoseRS_3581 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RoseRS_0359 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RoseRS_4128 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RoseRS_0881 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RoseRS_1611 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RoseRS_3579 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RoseRS_4097 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RoseRS_1416 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RoseRS_4601 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RoseRS_2384 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RoseRS_3802 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RoseRS_2652 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_4124 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_0222 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RoseRS_3928 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RoseRS_1853 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RoseRS_3655 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RoseRS_4076 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RoseRS_3652 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RoseRS_4166 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RoseRS_4393 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RoseRS_1131 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RoseRS_2396 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D RoseRS_2681 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RoseRS_1724 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D RoseRS_4429 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D RoseRS_4430 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:rrs00550]
D RoseRS_0212 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RoseRS_3790 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RoseRS_3788 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RoseRS_3783 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RoseRS_0794 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RoseRS_3791 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RoseRS_3781 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RoseRS_2981 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D RoseRS_2015 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RoseRS_3591 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RoseRS_3782 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RoseRS_3786 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RoseRS_1280 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RoseRS_3780 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RoseRS_1118 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D RoseRS_3840 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D RoseRS_0500 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D RoseRS_3477 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D RoseRS_3975 Methicillin resistance protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
C 00552 Teichoic acid biosynthesis [PATH:rrs00552]
D RoseRS_3591 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RoseRS_4524 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RoseRS_1978 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RoseRS_1714 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RoseRS_4519 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RoseRS_0131 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RoseRS_0249 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RoseRS_2527 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rrs00543]
D RoseRS_4524 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RoseRS_3594 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RoseRS_4233 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RoseRS_1339 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RoseRS_1340 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RoseRS_3035 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rrs00730]
D RoseRS_1921 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RoseRS_0168 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RoseRS_1926 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RoseRS_1927 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RoseRS_2475 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RoseRS_1990 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RoseRS_3933 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D RoseRS_1164 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RoseRS_1214 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RoseRS_1028 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:rrs00740]
D RoseRS_0970 Riboflavin synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D RoseRS_0969 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RoseRS_3756 riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RoseRS_1926 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RoseRS_2429 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rrs00750]
D RoseRS_0423 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RoseRS_2214 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RoseRS_3080 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RoseRS_3236 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RoseRS_3235 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rrs00760]
D RoseRS_0437 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RoseRS_0438 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RoseRS_0439 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RoseRS_1316 Nicotinic acid phosphoribosyltransferase-like protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RoseRS_1299 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RoseRS_0843 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RoseRS_2217 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RoseRS_3650 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RoseRS_2679 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RoseRS_3344 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RoseRS_1260 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RoseRS_1261 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RoseRS_4289 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RoseRS_0048 isochorismatase hydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
C 00770 Pantothenate and CoA biosynthesis [PATH:rrs00770]
D RoseRS_1968 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RoseRS_1967 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RoseRS_1966 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RoseRS_3155 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RoseRS_0745 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RoseRS_4344 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RoseRS_0328 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RoseRS_0744 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RoseRS_2186 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RoseRS_1561 Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RoseRS_2610 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RoseRS_4316 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RoseRS_1045 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RoseRS_2906 Phosphopantetheinyl transferase-like protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RoseRS_1962 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_2544 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rrs00780]
D RoseRS_4603 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_3468 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_3590 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_0750 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_0479 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_2882 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_0987 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1126 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_4552 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_4347 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_2289 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1807 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_3122 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RoseRS_1555 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RoseRS_4051 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rrs00785]
D RoseRS_1043 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RoseRS_1042 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RoseRS_3413 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_2952 Transketolase, central region K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RoseRS_1728 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RoseRS_1727 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RoseRS_1726 Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RoseRS_3396 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RoseRS_3397 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RoseRS_2415 branched-chain alpha-keto acid dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RoseRS_2416 branched-chain alpha-keto acid dehydrogenase E1 component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RoseRS_1675 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RoseRS_1524 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RoseRS_1522 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RoseRS_1526 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RoseRS_1525 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rrs00790]
D RoseRS_0705 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RoseRS_1990 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RoseRS_2866 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RoseRS_4541 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RoseRS_0704 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RoseRS_0192 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RoseRS_3546 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RoseRS_0542 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D RoseRS_2897 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D RoseRS_2110 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RoseRS_0543 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RoseRS_3195 molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D RoseRS_3916 molybdenum cofactor synthesis domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RoseRS_0825 molybdenum cofactor cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D RoseRS_0284 Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rrs00670]
D RoseRS_0219 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RoseRS_4392 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RoseRS_4575 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RoseRS_0389 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RoseRS_2693 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RoseRS_0206 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RoseRS_3920 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RoseRS_1526 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RoseRS_0064 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RoseRS_2032 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rrs00860]
D RoseRS_1695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RoseRS_1746 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RoseRS_1753 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RoseRS_2608 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RoseRS_1752 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RoseRS_1750 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RoseRS_1751 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RoseRS_0866 Uroporphyrinogen decarboxylase (URO-D) K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RoseRS_1748 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RoseRS_4171 Flavodoxin-like protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D RoseRS_1744 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D RoseRS_1749 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RoseRS_4065 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RoseRS_0573 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RoseRS_0941 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D RoseRS_0224 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RoseRS_4134 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D RoseRS_0565 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RoseRS_4477 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RoseRS_0570 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RoseRS_0572 precorrin-3 methyltransferase / precorrin-2 dehydrogenase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D RoseRS_0571 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RoseRS_0568 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RoseRS_0569 precorrin-6Y C5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RoseRS_0567 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RoseRS_0574 cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RoseRS_0558 hydrogenobyrinic acid a,c-diamide cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RoseRS_3099 hydrogenobyrinic acid a,c-diamide cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RoseRS_1980 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RoseRS_0557 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RoseRS_0577 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RoseRS_0564 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RoseRS_0575 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RoseRS_4584 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RoseRS_0559 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RoseRS_4586 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RoseRS_1904 hydrogenobyrinic acid a,c-diamide cobaltochelatase K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RoseRS_2525 hydrogenobyrinic acid a,c-diamide cobaltochelatase K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RoseRS_2823 protoporphyrin IX magnesium-chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RoseRS_1902 protoporphyrin IX magnesium-chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RoseRS_1907 magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D RoseRS_0942 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D RoseRS_1905 Mg-protoporphyrin IX monomethyl ester (oxidative) cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D RoseRS_0940 bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D RoseRS_1908 light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D RoseRS_1910 light-independent protochlorophyllide reductase, N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D RoseRS_1909 light-independent protochlorophyllide reductase, B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D RoseRS_3266 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D RoseRS_3260 chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D RoseRS_3257 chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D RoseRS_3256 chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D RoseRS_3262 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D RoseRS_3261 Alcohol dehydrogenase, zinc-binding domain protein K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D RoseRS_3265 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RoseRS_2721 pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rrs00130]
D RoseRS_2185 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RoseRS_0026 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D RoseRS_0025 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D RoseRS_4115 alpha/beta hydrolase fold K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D RoseRS_2859 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RoseRS_0023 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D RoseRS_0024 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RoseRS_2446 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D RoseRS_1492 1,4-Dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RoseRS_0566 Multimeric flavodoxin WrbA-like protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rrs00900]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_0430 putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D RoseRS_0431 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D RoseRS_2135 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D RoseRS_4285 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D RoseRS_2247 aspartate/glutamate/uridylate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26]
D RoseRS_2437 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RoseRS_0533 Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RoseRS_2015 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RoseRS_3265 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rrs00906]
D RoseRS_2117 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RoseRS_2155 Phytoene dehydrogenase-related protein K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RoseRS_0943 Phytoene dehydrogenase-related protein K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RoseRS_1811 UDP-galactopyranose mutase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rrs00907]
D RoseRS_4162 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RoseRS_2545 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_2969 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RoseRS_4614 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics [PATH:rrs01059]
D RoseRS_2893 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
D RoseRS_4077 Nucleotidyl transferase K21210 ncsC; NDP-mannose synthase
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rrs00523]
D RoseRS_4128 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RoseRS_0881 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RoseRS_1611 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RoseRS_3579 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RoseRS_4097 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RoseRS_1416 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RoseRS_4601 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RoseRS_0026 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D RoseRS_1611 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RoseRS_3579 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rrs00946]
D RoseRS_3480 glycoside hydrolase, family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RoseRS_3614 beta-glucosidase. Glycosyl Hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RoseRS_2967 glycoside hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RoseRS_2735 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:rrs00311]
D RoseRS_1377 aminotransferase, class V K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D RoseRS_0796 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D RoseRS_1297 peptidase S45, penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:rrs00332]
D RoseRS_0762 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RoseRS_0763 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rrs00261]
D RoseRS_3336 sulfate adenylyltransferase / adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RoseRS_2031 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RoseRS_3079 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RoseRS_3078 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RoseRS_3604 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rrs00521]
D RoseRS_2512 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_3170 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_2764 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_0382 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RoseRS_1153 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RoseRS_3316 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RoseRS_4128 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RoseRS_0881 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RoseRS_1611 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RoseRS_3579 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RoseRS_4097 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RoseRS_1416 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RoseRS_4601 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RoseRS_2512 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_3170 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RoseRS_2764 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rrs00525]
D RoseRS_4128 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RoseRS_0881 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RoseRS_1611 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RoseRS_3579 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rrs00401]
D RoseRS_2023 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RoseRS_3872 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RoseRS_1455 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RoseRS_1454 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RoseRS_3469 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RoseRS_0479 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_2882 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_0987 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1126 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_4552 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_4347 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_2289 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1807 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1555 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RoseRS_0984 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rrs00999]
D RoseRS_0489 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RoseRS_0919 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RoseRS_3480 glycoside hydrolase, family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RoseRS_3614 beta-glucosidase. Glycosyl Hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RoseRS_2967 glycoside hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rrs00362]
D RoseRS_2225 alpha/beta hydrolase fold K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RoseRS_2545 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_2969 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_2578 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RoseRS_2573 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RoseRS_2572 Semialdehyde dehydrogenase, NAD - binding K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D RoseRS_2577 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D RoseRS_2575 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RoseRS_2970 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RoseRS_2300 acyl-CoA dehydrogenase domain protein K16173 acd; glutaryl-CoA dehydrogenase (non-decarboxylating) [EC:1.3.99.32]
D RoseRS_3692 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RoseRS_3693 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rrs00627]
D RoseRS_2413 FAD dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-]
D RoseRS_1254 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RoseRS_0311 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation [PATH:rrs00364]
D RoseRS_2684 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rrs00625]
D RoseRS_0752 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RoseRS_3921 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RoseRS_0265 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RoseRS_1198 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RoseRS_1201 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D RoseRS_1199 nitrogenase component I, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RoseRS_3822 alpha/beta hydrolase fold K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D RoseRS_3515 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rrs00361]
D RoseRS_2684 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RoseRS_3515 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RoseRS_3822 alpha/beta hydrolase fold K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:rrs00623]
D RoseRS_2684 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:rrs00622]
D RoseRS_2577 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D RoseRS_2575 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RoseRS_2578 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RoseRS_2573 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RoseRS_2572 Semialdehyde dehydrogenase, NAD - binding K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation
D RoseRS_2320 nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RoseRS_2319 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D RoseRS_2545 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RoseRS_2969 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rrs00643]
D RoseRS_1254 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D RoseRS_2498 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:rrs00621]
D RoseRS_2575 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RoseRS_2578 4-oxalocrotonate decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RoseRS_2573 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RoseRS_2572 Semialdehyde dehydrogenase, NAD - binding K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:rrs00626]
D RoseRS_0752 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RoseRS_3921 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rrs03020]
D RoseRS_1265 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RoseRS_1264 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RoseRS_1158 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rrs03010]
D RoseRS_1730 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D RoseRS_3968 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D RoseRS_4287 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D RoseRS_2019 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D RoseRS_1179 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D RoseRS_1159 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D RoseRS_1168 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D RoseRS_3402 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D RoseRS_1189 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D RoseRS_1171 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D RoseRS_1154 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D RoseRS_1186 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D RoseRS_1160 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D RoseRS_1190 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D RoseRS_1161 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D RoseRS_1172 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D RoseRS_0948 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D RoseRS_1287 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D RoseRS_1176 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D RoseRS_3400 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D RoseRS_0600 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D RoseRS_1181 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D RoseRS_3076 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D RoseRS_3327 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D RoseRS_1182 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D RoseRS_1185 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D RoseRS_1184 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D RoseRS_1173 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D RoseRS_1170 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D RoseRS_3329 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D RoseRS_1150 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D RoseRS_3328 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D RoseRS_3326 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D RoseRS_1155 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D RoseRS_1175 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D RoseRS_1166 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D RoseRS_1178 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D RoseRS_1157 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D RoseRS_1169 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D RoseRS_2781 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D RoseRS_1034 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D RoseRS_2695 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D RoseRS_1180 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D RoseRS_1183 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D RoseRS_1174 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D RoseRS_0426 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D RoseRS_2696 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D RoseRS_3523 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D RoseRS_0601 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RoseRS_1177 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D RoseRS_1167 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D RoseRS_2697 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D RoseRS_2613 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D RoseRS_1008 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D RoseRS_3967 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D RoseRS_1033 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D RoseRS_1162 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D RoseRS_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RoseRS_R0032 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RoseRS_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RoseRS_R0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RoseRS_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RoseRS_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rrs00970]
D RoseRS_R0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RoseRS_R0037 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RoseRS_R0036 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RoseRS_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0051 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0031 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RoseRS_R0013 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RoseRS_R0052 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RoseRS_R0056 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RoseRS_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RoseRS_R0014 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RoseRS_R0020 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RoseRS_R0057 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RoseRS_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RoseRS_R0001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RoseRS_R0007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RoseRS_R0053 tRNA-His K14226 tRNA-His; tRNA His
D RoseRS_R0022 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RoseRS_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0026 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RoseRS_R0029 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RoseRS_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D RoseRS_R0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D RoseRS_R0019 tRNA-Met K14230 tRNA-Met; tRNA Met
D RoseRS_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D RoseRS_R0011 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RoseRS_R0038 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RoseRS_R0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RoseRS_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RoseRS_R0050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RoseRS_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RoseRS_R0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RoseRS_R0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RoseRS_R0005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RoseRS_R0046 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RoseRS_R0047 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RoseRS_R0042 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RoseRS_R0045 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RoseRS_R0010 tRNA-Val K14237 tRNA-Val; tRNA Val
D RoseRS_R0023 tRNA-Val K14237 tRNA-Val; tRNA Val
D RoseRS_R0003 tRNA-Val K14237 tRNA-Val; tRNA Val
D RoseRS_1695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RoseRS_2947 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RoseRS_3083 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RoseRS_1111 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RoseRS_1143 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RoseRS_3223 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RoseRS_1979 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RoseRS_0232 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RoseRS_0862 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RoseRS_2026 metal dependent phosphohydrolase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RoseRS_0110 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RoseRS_3466 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RoseRS_3036 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RoseRS_2037 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RoseRS_3920 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RoseRS_0129 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RoseRS_4535 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RoseRS_0727 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RoseRS_0078 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RoseRS_1309 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RoseRS_2277 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RoseRS_1775 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RoseRS_4574 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RoseRS_3187 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RoseRS_1036 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RoseRS_1038 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RoseRS_2069 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RoseRS_1456 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rrs03060]
D RoseRS_1165 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RoseRS_3324 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RoseRS_0724 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D RoseRS_3982 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RoseRS_3983 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D RoseRS_3965 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RoseRS_0823 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RoseRS_1286 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RoseRS_R0002 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D RoseRS_1050 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RoseRS_0928 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RoseRS_3342 ATPase involved in chromosome partitioning-like protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RoseRS_3576 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RoseRS_0983 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D RoseRS_0982 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D RoseRS_2149 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RoseRS_0255 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rrs04122]
D RoseRS_0168 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RoseRS_0717 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_1488 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_0726 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RoseRS_0815 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RoseRS_2136 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RoseRS_2110 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RoseRS_0722 thiamineS protein K03636 moaD; sulfur-carrier protein
D RoseRS_3195 molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D RoseRS_0723 UBA/THIF-type NAD/FAD binding protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D RoseRS_0543 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RoseRS_3916 molybdenum cofactor synthesis domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rrs03018]
D RoseRS_3445 protein of unknown function DUF88 K08300 rne; ribonuclease E [EC:3.1.26.12]
D RoseRS_4532 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RoseRS_0949 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RoseRS_3701 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RoseRS_3222 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RoseRS_0330 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RoseRS_0875 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RoseRS_2734 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RoseRS_3246 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_3460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_4131 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_1077 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_3717 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rrs03030]
D RoseRS_1899 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_2006 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_0091 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RoseRS_1535 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RoseRS_3588 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RoseRS_3075 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RoseRS_4406 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RoseRS_1149 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RoseRS_0288 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RoseRS_3401 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0828 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_1771 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_1014 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RoseRS_3014 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RoseRS_2783 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RoseRS_3415 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RoseRS_4515 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RoseRS_0056 AAA ATPase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
C 03410 Base excision repair [PATH:rrs03410]
D RoseRS_2523 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RoseRS_3189 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RoseRS_1946 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RoseRS_0318 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RoseRS_0873 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RoseRS_0614 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RoseRS_3415 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RoseRS_2008 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RoseRS_4515 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rrs03420]
D RoseRS_3660 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RoseRS_3848 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RoseRS_3438 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RoseRS_3705 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D RoseRS_3154 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RoseRS_0142 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_2224 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_0060 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_3415 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RoseRS_4515 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rrs03430]
D RoseRS_3706 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RoseRS_4014 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D RoseRS_4548 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RoseRS_0142 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_2224 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_0060 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_3173 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RoseRS_3174 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RoseRS_2008 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RoseRS_3401 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0828 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_1771 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0091 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RoseRS_4406 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RoseRS_1535 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RoseRS_3075 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RoseRS_3588 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RoseRS_1899 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_2006 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_4515 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RoseRS_0233 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_3043 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rrs03440]
D RoseRS_2008 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RoseRS_3401 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0828 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_1771 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_2436 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RoseRS_1301 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RoseRS_1533 recombination protein RecR K06187 recR; recombination protein RecR
D RoseRS_3118 recA protein K03553 recA; recombination protein RecA
D RoseRS_3415 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RoseRS_3772 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RoseRS_2425 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RoseRS_4363 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RoseRS_3518 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RoseRS_2125 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RoseRS_1735 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RoseRS_0091 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RoseRS_4406 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RoseRS_1535 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RoseRS_3075 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RoseRS_3588 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RoseRS_1899 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_2006 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_1240 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rrs02010]
D RoseRS_1798 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RoseRS_1797 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D RoseRS_1796 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RoseRS_2294 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D RoseRS_2293 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D RoseRS_0795 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RoseRS_1645 extracellular solute-binding protein, family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RoseRS_1644 Ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein
D RoseRS_1642 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D RoseRS_1641 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RoseRS_1816 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D RoseRS_1814 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D RoseRS_1817 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D RoseRS_1815 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RoseRS_0525 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RoseRS_2896 extracellular solute-binding protein, family 1 K10240 cebE; cellobiose transport system substrate-binding protein
D RoseRS_2895 binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein
D RoseRS_2894 binding-protein-dependent transport systems inner membrane component K10242 cebG; cellobiose transport system permease protein
D RoseRS_1320 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RoseRS_1319 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D RoseRS_1318 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D RoseRS_1317 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D RoseRS_0803 extracellular solute-binding protein, family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RoseRS_0802 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D RoseRS_0801 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D RoseRS_3058 ABC-type sugar transport system periplasmic component-like protein K10439 rbsB; ribose transport system substrate-binding protein
D RoseRS_4489 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D RoseRS_3055 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D RoseRS_3056 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D RoseRS_3057 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RoseRS_2726 Monosaccharide-transporting ATPase K10560 rhaP; rhamnose transport system permease protein
D RoseRS_2727 Monosaccharide-transporting ATPase K10561 rhaQ; rhamnose transport system permease protein
D RoseRS_2725 ABC transporter related K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D RoseRS_4566 extracellular solute-binding protein, family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RoseRS_4568 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RoseRS_4567 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RoseRS_4152 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_3610 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_4157 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_4151 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D RoseRS_4156 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D RoseRS_4150 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D RoseRS_4155 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D RoseRS_4148 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RoseRS_4154 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RoseRS_4149 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RoseRS_1595 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RoseRS_1592 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RoseRS_1593 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RoseRS_1594 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RoseRS_4005 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RoseRS_1420 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RoseRS_4004 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein
D RoseRS_4003 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D RoseRS_4002 ABC transporter related K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RoseRS_2975 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_0626 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_1544 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_4104 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_2976 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_0624 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_1543 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_4107 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_2977 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_0625 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_4108 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_2978 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_0622 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1540 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_4105 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_2979 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_0627 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1539 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_4106 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1093 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D RoseRS_1094 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D RoseRS_1095 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D RoseRS_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D RoseRS_3070 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RoseRS_3068 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein
D RoseRS_3067 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein
D RoseRS_3069 ABC transporter related K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RoseRS_0561 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D RoseRS_0174 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D RoseRS_0560 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D RoseRS_0562 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RoseRS_0170 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RoseRS_0563 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RoseRS_0169 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RoseRS_1923 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RoseRS_4523 BioY protein K03523 bioY; biotin transport system substrate-specific component
D RoseRS_3451 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D RoseRS_3101 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D RoseRS_4096 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D RoseRS_3367 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D RoseRS_4089 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RoseRS_0858 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RoseRS_0755 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D RoseRS_3568 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D RoseRS_0754 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D RoseRS_0753 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RoseRS_3830 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein
D RoseRS_3831 ABC-2 type transporter K16906 K16906; fluoroquinolone transport system permease protein
D RoseRS_3832 ABC transporter related K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D RoseRS_1216 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RoseRS_0495 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RoseRS_0494 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RoseRS_2719 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RoseRS_2717 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RoseRS_0040 ABC transporter related K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:rrs02060]
D RoseRS_3304 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RoseRS_3303 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D RoseRS_1770 phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
C 03070 Bacterial secretion system [PATH:rrs03070]
D RoseRS_3982 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RoseRS_3983 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D RoseRS_3324 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RoseRS_0724 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D RoseRS_1165 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RoseRS_3965 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RoseRS_0823 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RoseRS_1050 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RoseRS_1286 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RoseRS_3576 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RoseRS_0983 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D RoseRS_0982 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rrs02020]
D RoseRS_3817 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RoseRS_2295 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RoseRS_0805 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RoseRS_3737 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RoseRS_4483 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RoseRS_0114 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RoseRS_1990 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RoseRS_4049 two component transcriptional regulator, winged helix family K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RoseRS_4152 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_3610 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_4157 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_0798 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D RoseRS_0195 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RoseRS_0761 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RoseRS_4134 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D RoseRS_0035 response regulator receiver protein K07668 vicR; two-component system, OmpR family, response regulator VicR
D RoseRS_2290 two component transcriptional regulator, winged helix family K07669 mprA; two-component system, OmpR family, response regulator MprA
D RoseRS_1527 response regulator receiver protein K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RoseRS_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RoseRS_4161 two component transcriptional regulator, winged helix family K07672 trcR; two-component system, OmpR family, response regulator TrcR
D RoseRS_4041 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D RoseRS_2286 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RoseRS_3704 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RoseRS_3511 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D RoseRS_3762 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RoseRS_0939 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RoseRS_3601 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RoseRS_3354 SAF domain K02279 cpaB; pilus assembly protein CpaB
D RoseRS_1273 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_3353 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_4620 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_1876 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_1274 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_3352 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_2200 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_2202 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_1275 type II secretion system protein K12510 tadB; tight adherence protein B
D RoseRS_3351 type II secretion system protein K12510 tadB; tight adherence protein B
D RoseRS_1276 type II secretion system protein K12511 tadC; tight adherence protein C
D RoseRS_1399 type II secretion system protein K12511 tadC; tight adherence protein C
D RoseRS_3350 type II secretion system protein K12511 tadC; tight adherence protein C
D RoseRS_1047 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2715 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2983 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4482 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D RoseRS_1618 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D RoseRS_2319 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RoseRS_2320 nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RoseRS_2321 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D RoseRS_0033 Protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RoseRS_0993 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RoseRS_0995 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_1000 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_0039 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_0998 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0036 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0034 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RoseRS_0994 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RoseRS_0205 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D RoseRS_3612 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D RoseRS_2028 GAF sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_2844 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_4039 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_0244 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_0292 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_3727 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_2627 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_4027 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_3268 photosynthetic reaction center, M subunit K08928 pufL; photosynthetic reaction center L subunit
D RoseRS_3270 antenna complex, alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D RoseRS_2484 cytochrome c, class I K08738 CYC; cytochrome c
D RoseRS_1498 cytochrome c, class I K08738 CYC; cytochrome c
D RoseRS_3252 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RoseRS_1131 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D RoseRS_4137 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RoseRS_1433 Arginase/agmatinase/formiminoglutamase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rrs02024]
D RoseRS_1455 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RoseRS_1454 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RoseRS_2785 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RoseRS_0195 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RoseRS_0761 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RoseRS_0793 ABC-type Fe3+ transport system periplasmic component-like protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RoseRS_0791 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RoseRS_0792 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RoseRS_0790 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RoseRS_2975 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_0626 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_1544 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_4104 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_2976 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_0624 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_1543 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_4107 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_2977 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_0625 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_4108 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_2978 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_0622 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1540 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_4105 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_2979 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_0627 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1539 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_4106 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1673 FHA domain containing protein K20276 bapA; large repetitive protein
D RoseRS_1702 hypothetical protein K20276 bapA; large repetitive protein
D RoseRS_1068 conserved repeat domain K20276 bapA; large repetitive protein
D RoseRS_2094 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0623 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_1007 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_2084 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_4612 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0228 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_3648 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0244 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_0292 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_3727 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_2627 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_4027 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_0904 protein of unknown function DUF323 K20333 toxD; toxoflavin biosynthesis protein ToxD
D RoseRS_1093 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D RoseRS_1094 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D RoseRS_1095 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D RoseRS_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D RoseRS_3050 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_2770 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_4599 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_2808 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0093 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0937 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0725 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0354 ABC-type dipeptide transport system periplasmic component-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0413 ABC-type dipeptide transport system periplasmic component-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0414 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RoseRS_2809 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RoseRS_4598 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RoseRS_3049 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RoseRS_3048 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RoseRS_4597 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RoseRS_0415 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RoseRS_2810 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RoseRS_2318 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RoseRS_2811 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RoseRS_0416 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RoseRS_2812 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RoseRS_0417 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RoseRS_1830 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D RoseRS_3965 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RoseRS_3324 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RoseRS_0724 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D RoseRS_1165 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RoseRS_0823 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RoseRS_1050 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RoseRS_1286 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RoseRS_4041 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rrs02030]
D RoseRS_3058 ABC-type sugar transport system periplasmic component-like protein K10439 rbsB; ribose transport system substrate-binding protein
D RoseRS_4489 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D RoseRS_0998 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0036 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0995 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_1000 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_0039 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_0034 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RoseRS_0994 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RoseRS_0033 Protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RoseRS_0993 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
C 02040 Flagellar assembly
D RoseRS_0287 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_0191 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_4616 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_3114 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_3157 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_2257 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RoseRS_4532 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rrs04980]
D RoseRS_1980 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RoseRS_2025 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D RoseRS_0546 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D RoseRS_0545 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_0544 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RoseRS_0064 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rrs01501]
D RoseRS_3511 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D RoseRS_1093 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D RoseRS_1094 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D RoseRS_1095 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D RoseRS_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D RoseRS_1280 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RoseRS_3780 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rrs01502]
D RoseRS_3791 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RoseRS_2559 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RoseRS_2981 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D RoseRS_3781 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RoseRS_3782 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RoseRS_3786 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D RoseRS_0798 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rrs01000]
C 01001 Protein kinases [BR:rrs01001]
D RoseRS_1674 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_1671 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_1670 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_3659 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_1669 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_0666 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_2631 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_3845 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_1465 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_1529 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_2229 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_3378 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_3305 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_3498 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_2600 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_4596 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_4604 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_1844 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_3625 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_3893 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_1259 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_4032 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_1519 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RoseRS_0162 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RoseRS_2297 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RoseRS_0030 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_3290 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_3289 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_3766 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_2161 anti-sigma-factor antagonist K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_2767 protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D RoseRS_4042 Non-specific protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RoseRS_4270 Non-specific protein-tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D RoseRS_4219 lipopolysaccharide biosynthesis protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D RoseRS_3817 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RoseRS_2295 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RoseRS_3188 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RoseRS_3762 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RoseRS_0939 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RoseRS_4482 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D RoseRS_1618 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D RoseRS_2364 GAF sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RoseRS_1897 GAF sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RoseRS_0208 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RoseRS_0317 response regulator receiver sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RoseRS_0998 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0036 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_2028 GAF sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_2844 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_4039 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_4627 GAF sensor signal transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D RoseRS_1308 multi-sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rrs01009]
D RoseRS_0488 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RoseRS_2734 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RoseRS_4301 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RoseRS_2765 protein phosphatase 2C domain protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RoseRS_4547 protein phosphatase 2C domain protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RoseRS_2766 protein phosphatase 2C domain protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RoseRS_3377 protein phosphatase 2C domain protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RoseRS_3499 PASTA domain containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RoseRS_1464 protein phosphatase 2C domain protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rrs01002]
D RoseRS_0255 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RoseRS_1565 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RoseRS_2322 hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D RoseRS_2733 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D RoseRS_1774 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RoseRS_2132 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RoseRS_4207 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D RoseRS_1822 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D RoseRS_2428 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D RoseRS_3502 CHAP domain containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RoseRS_3743 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RoseRS_2985 glutamate synthase (NADPH) large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D RoseRS_4064 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RoseRS_2367 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RoseRS_2044 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_2461 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_3649 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_4419 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_4439 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RoseRS_2580 ThiJ/PfpI domain protein K05520 yhbO; deglycase [EC:3.5.1.124]
D RoseRS_1742 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D RoseRS_4170 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D RoseRS_1003 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D RoseRS_3119 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D RoseRS_4016 Abortive infection protein K07052 K07052; CAAX protease family protein
D RoseRS_1880 Abortive infection protein K07052 K07052; CAAX protease family protein
D RoseRS_1918 Abortive infection protein K07052 K07052; CAAX protease family protein
D RoseRS_3747 Abortive infection protein K07052 K07052; CAAX protease family protein
D RoseRS_0951 Abortive infection protein K07052 K07052; CAAX protease family protein
D RoseRS_1255 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RoseRS_0158 Peptidase M16C associated domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D RoseRS_2273 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RoseRS_2274 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RoseRS_0699 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RoseRS_3883 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RoseRS_1704 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RoseRS_1343 peptidase M23B K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RoseRS_3795 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RoseRS_1789 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D RoseRS_4628 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D RoseRS_0616 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RoseRS_2644 peptidase M29, aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D RoseRS_1549 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RoseRS_4361 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RoseRS_1848 AAA ATPase, central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RoseRS_1928 HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RoseRS_1982 peptidase M48, Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RoseRS_2601 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RoseRS_2624 cyclic nucleotide-binding protein K16922 yydH; putative peptide zinc metalloprotease protein
D RoseRS_2739 membrane protein-like protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D RoseRS_0798 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D RoseRS_0797 PDZ/DHR/GLGF domain protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RoseRS_1379 peptidase S8 and S53, subtilisin, kexin, sedolisin K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D RoseRS_0664 peptidase S8 and S53, subtilisin, kexin, sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RoseRS_0678 peptidase S8 and S53, subtilisin, kexin, sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RoseRS_3989 peptidase S8 and S53, subtilisin, kexin, sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-]
D RoseRS_1579 Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D RoseRS_3662 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RoseRS_1553 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RoseRS_2778 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RoseRS_1605 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RoseRS_1469 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RoseRS_3815 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RoseRS_0427 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RoseRS_2149 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RoseRS_2857 alpha/beta hydrolase fold K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-]
D RoseRS_3039 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RoseRS_0582 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RoseRS_1251 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RoseRS_1119 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RoseRS_1092 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D RoseRS_2312 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D RoseRS_1297 peptidase S45, penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RoseRS_1819 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D RoseRS_2394 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D RoseRS_3784 Rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D RoseRS_3096 Rhomboid family protein K07059 K07059; rhomboid family protein
D RoseRS_0104 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RoseRS_2169 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RoseRS_3730 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RoseRS_2870 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
D RoseRS_2190 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
D RoseRS_1097 Large extracellular alpha-helical protein-like protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:rrs01003]
D RoseRS_3761 glycosyl transferase, family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RoseRS_1130 glycosyl transferase, family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RoseRS_4579 glycosyl transferase, group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D RoseRS_4446 glycosyl transferase, group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D RoseRS_2527 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RoseRS_2339 glycosyl transferase, group 1 K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D RoseRS_3472 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_0506 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_0846 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_1065 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_1630 glycosyl transferase, group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RoseRS_1081 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D RoseRS_3594 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RoseRS_4233 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RoseRS_1339 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RoseRS_1340 glycosyl transferase, group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D RoseRS_1978 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RoseRS_4524 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RoseRS_2507 membrane protein-like protein K14340 K14340; mannosyltransferase [EC:2.4.1.-]
D RoseRS_2737 glycosyltransferase 36 K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D RoseRS_4605 glycosyl transferase, family 2 K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D RoseRS_4607 glycosyl transferase, family 2 K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D RoseRS_0907 Sterol 3-beta-glucosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rrs01005]
D RoseRS_1655 hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RoseRS_4268 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D RoseRS_2381 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RoseRS_3171 sugar isomerase (SIS) K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RoseRS_4218 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RoseRS_4447 glycosyl transferase, family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RoseRS_3414 Ribonuclease III K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RoseRS_4081 glycosyl transferase, family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RoseRS_4524 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rrs01011]
D RoseRS_0212 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RoseRS_3790 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RoseRS_3788 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RoseRS_3783 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RoseRS_0794 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RoseRS_2981 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D RoseRS_3791 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RoseRS_3975 Methicillin resistance protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D RoseRS_2559 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RoseRS_1521 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RoseRS_3782 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RoseRS_3786 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RoseRS_3591 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RoseRS_3077 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RoseRS_0132 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RoseRS_0865 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D RoseRS_1280 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RoseRS_3780 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RoseRS_1118 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D RoseRS_3840 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D RoseRS_3502 CHAP domain containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RoseRS_1343 peptidase M23B K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RoseRS_4170 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D RoseRS_1003 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D RoseRS_3119 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D RoseRS_2641 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RoseRS_1563 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:rrs01004]
D RoseRS_3469 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RoseRS_2614 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RoseRS_4603 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_3468 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_3590 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_0750 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RoseRS_0479 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_2882 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_0987 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1126 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_4552 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_4347 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_2289 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_1807 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RoseRS_3122 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RoseRS_1555 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RoseRS_2004 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_2003 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RoseRS_1953 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RoseRS_4534 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RoseRS_2094 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0623 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_1007 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_2084 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_4612 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0228 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_3648 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_4613 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RoseRS_3809 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RoseRS_2831 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rrs01008]
D RoseRS_2893 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
D RoseRS_1377 aminotransferase, class V K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 01006 Prenyltransferases [BR:rrs01006]
D RoseRS_0533 Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RoseRS_2015 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RoseRS_2117 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RoseRS_3334 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RoseRS_1492 1,4-Dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RoseRS_0224 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RoseRS_3266 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rrs01007]
D RoseRS_1695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RoseRS_2069 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RoseRS_1456 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RoseRS_3036 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RoseRS_1309 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RoseRS_2037 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RoseRS_0727 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RoseRS_0129 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RoseRS_4535 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RoseRS_0078 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RoseRS_1979 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RoseRS_0232 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RoseRS_4574 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RoseRS_3187 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RoseRS_0862 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RoseRS_2026 metal dependent phosphohydrolase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RoseRS_3466 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RoseRS_2277 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RoseRS_1775 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RoseRS_0110 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RoseRS_3223 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RoseRS_1036 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RoseRS_1038 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RoseRS_1560 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RoseRS_3240 aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D RoseRS_3872 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RoseRS_0703 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RoseRS_0842 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RoseRS_2722 acetylornithine aminotransferase / N2-acetyl-L-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D RoseRS_4570 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RoseRS_1738 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_3926 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RoseRS_1753 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RoseRS_2608 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RoseRS_1962 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_2544 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RoseRS_2214 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RoseRS_3652 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RoseRS_4166 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rrs00194]
D RoseRS_0511 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RoseRS_0512 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RoseRS_0513 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RoseRS_0514 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RoseRS_0515 H+-transporting two-sector ATPase, delta (OSCP) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RoseRS_0516 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RoseRS_0517 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RoseRS_0518 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RoseRS_3268 photosynthetic reaction center, M subunit K08928 pufL; photosynthetic reaction center L subunit
D RoseRS_3267 hypothetical protein K13992 pufC; photosynthetic reaction center cytochrome c subunit
D RoseRS_3270 antenna complex, alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rrs03000]
D RoseRS_4109 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RoseRS_3960 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D RoseRS_3623 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RoseRS_2856 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RoseRS_0524 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D RoseRS_1355 transcriptional regulator, GntR family K07978 plmA; GntR family transcriptional regulator
D RoseRS_1940 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RoseRS_1647 putative transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D RoseRS_3095 hypothetical protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D RoseRS_2116 regulatory protein, MerR K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RoseRS_3271 putative transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RoseRS_0593 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RoseRS_1293 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RoseRS_0244 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_0292 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_3727 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_2627 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_4027 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RoseRS_0595 transcriptional regulator, Crp/Fnr family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D RoseRS_0295 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D RoseRS_1223 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RoseRS_1227 protein tyrosine phosphatase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RoseRS_1228 transcriptional regulator, ArsR family K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RoseRS_4549 iron dependent repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D RoseRS_3986 FeoA family protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RoseRS_4512 iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RoseRS_0550 FeoA family protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RoseRS_3574 iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RoseRS_4051 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RoseRS_0021 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RoseRS_0379 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D RoseRS_0464 transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D RoseRS_4103 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D RoseRS_3295 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RoseRS_0141 transcriptional regulator, CdaR family K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D RoseRS_0117 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RoseRS_0831 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RoseRS_2821 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RoseRS_3462 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RoseRS_1028 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RoseRS_2350 phage shock protein C, PspC K03973 pspC; phage shock protein C
D RoseRS_2455 phage shock protein C, PspC K03973 pspC; phage shock protein C
D RoseRS_3932 phage shock protein C, PspC K03973 pspC; phage shock protein C
D RoseRS_0522 phage shock protein C, PspC K03973 pspC; phage shock protein C
D RoseRS_2864 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RoseRS_0256 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RoseRS_0989 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D RoseRS_3777 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rrs03021]
D RoseRS_1158 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RoseRS_1265 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RoseRS_1264 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RoseRS_0287 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_0191 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_4616 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_3114 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_3157 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_2257 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor
D RoseRS_0309 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RoseRS_1760 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RoseRS_0090 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RoseRS_1471 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RoseRS_4389 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RoseRS_3810 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RoseRS_3749 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D RoseRS_0985 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D RoseRS_3325 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D RoseRS_0162 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RoseRS_2297 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RoseRS_0163 anti-sigma-factor antagonist K17762 rsbS; rsbT antagonist protein RsbS
D RoseRS_1710 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_2851 putative PAS/PAC sensor protein K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0135 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_4199 putative PAS/PAC sensor protein K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_1935 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_1936 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_3800 putative PAS/PAC sensor protein K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_2635 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_2646 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_2716 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_3508 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_3473 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_3476 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_2503 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_2566 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_2509 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_4490 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0053 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0092 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0221 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0409 putative PAS/PAC sensor protein K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0604 putative PAS/PAC sensor protein K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0787 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_4158 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0350 anti-sigma-factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR
D RoseRS_0032 Stage II sporulation E family protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RoseRS_3770 response regulator receiver protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RoseRS_2499 protein serine phosphatase with GAF(s) sensor(s) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RoseRS_2296 Stage II sporulation E family protein K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
D RoseRS_2160 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D RoseRS_3767 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D RoseRS_3288 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D RoseRS_0030 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_3290 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_3289 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_3766 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_2161 anti-sigma-factor antagonist K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RoseRS_0256 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RoseRS_0077 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RoseRS_3222 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rrs03019]
D RoseRS_3445 protein of unknown function DUF88 K08300 rne; ribonuclease E [EC:3.1.26.12]
D RoseRS_4602 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RoseRS_0875 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RoseRS_0330 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RoseRS_3701 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RoseRS_4532 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RoseRS_0949 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RoseRS_3222 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RoseRS_2734 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RoseRS_3246 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_3460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_4131 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_1077 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_3717 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 03041 Spliceosome
C 03011 Ribosome [BR:rrs03011]
D RoseRS_1730 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D RoseRS_3968 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D RoseRS_4287 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D RoseRS_2019 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D RoseRS_1179 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D RoseRS_1159 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D RoseRS_1168 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D RoseRS_3402 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D RoseRS_1189 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D RoseRS_1171 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D RoseRS_1154 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D RoseRS_1186 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D RoseRS_1160 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D RoseRS_1190 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D RoseRS_1161 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D RoseRS_1172 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D RoseRS_0948 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D RoseRS_1287 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D RoseRS_1176 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D RoseRS_3400 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D RoseRS_0600 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D RoseRS_1181 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D RoseRS_3076 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D RoseRS_3327 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D RoseRS_1182 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D RoseRS_1185 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D RoseRS_1184 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D RoseRS_1173 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D RoseRS_1170 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D RoseRS_1150 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D RoseRS_3328 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D RoseRS_3326 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D RoseRS_3329 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D RoseRS_1155 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D RoseRS_1175 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D RoseRS_1166 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D RoseRS_1178 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D RoseRS_1157 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D RoseRS_1169 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D RoseRS_2781 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D RoseRS_1034 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D RoseRS_2695 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D RoseRS_1180 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D RoseRS_1183 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D RoseRS_1174 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D RoseRS_2696 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D RoseRS_3523 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D RoseRS_0601 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RoseRS_1177 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D RoseRS_1167 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D RoseRS_2697 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D RoseRS_2613 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D RoseRS_1008 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D RoseRS_3967 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D RoseRS_1033 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D RoseRS_1162 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D RoseRS_0426 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D RoseRS_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RoseRS_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RoseRS_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RoseRS_R0032 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RoseRS_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RoseRS_R0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rrs03009]
D RoseRS_4602 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RoseRS_2181 GTP-binding protein Era K03595 era; GTPase
D RoseRS_3577 GTP1/OBG sub domain protein K03979 obgE; GTPase [EC:3.6.5.-]
D RoseRS_0256 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RoseRS_3749 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D RoseRS_0985 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D RoseRS_3325 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D RoseRS_0251 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RoseRS_3753 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D RoseRS_2609 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RoseRS_3038 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RoseRS_2216 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RoseRS_3778 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RoseRS_2029 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RoseRS_1981 ribosomal RNA methyltransferase K18845 rmt; 16S rRNA (guanine(1405)-N(7))-methyltransferase [EC:2.1.1.179]
D RoseRS_3862 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RoseRS_3458 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RoseRS_0887 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RoseRS_1376 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RoseRS_0352 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RoseRS_4592 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RoseRS_0254 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RoseRS_2639 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RoseRS_0876 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RoseRS_2427 GCN5-related N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RoseRS_1289 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RoseRS_0531 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RoseRS_3037 LSU ribosomal protein L11P methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RoseRS_3445 protein of unknown function DUF88 K08300 rne; ribonuclease E [EC:3.1.26.12]
D RoseRS_3225 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RoseRS_2475 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RoseRS_2146 small GTP-binding protein K03977 engA; GTPase
D RoseRS_4511 small GTP-binding protein K03977 engA; GTPase
D RoseRS_2334 small GTP-binding protein K03665 hflX; GTPase
D RoseRS_4321 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RoseRS_4122 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RoseRS_3752 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RoseRS_3248 iojap-like protein K09710 ybeB; ribosome-associated protein
D RoseRS_3596 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D RoseRS_2411 sigma 54 modulation protein / SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor
D RoseRS_1305 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D RoseRS_2612 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rrs03016]
D RoseRS_0588 beta-lactamase domain protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RoseRS_2847 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RoseRS_1930 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RoseRS_4508 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D RoseRS_1695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RoseRS_2277 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RoseRS_1775 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RoseRS_0727 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RoseRS_4535 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RoseRS_2037 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RoseRS_1309 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RoseRS_0078 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RoseRS_1979 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RoseRS_3223 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RoseRS_0232 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RoseRS_0862 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RoseRS_0110 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RoseRS_3466 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RoseRS_3036 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RoseRS_0129 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RoseRS_4574 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RoseRS_3187 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RoseRS_1036 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RoseRS_1038 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RoseRS_2069 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RoseRS_1456 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RoseRS_2445 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RoseRS_0075 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RoseRS_1156 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RoseRS_3755 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RoseRS_0168 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RoseRS_4321 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RoseRS_3334 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RoseRS_3161 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RoseRS_3168 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RoseRS_3966 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RoseRS_R0004 RNA component of RNaseP K01978 rnpB; M1 RNA
D RoseRS_2001 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RoseRS_3716 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RoseRS_1806 Phosphate acetyltransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D RoseRS_2495 ABC transporter related K06020 ettA; energy-dependent translational throttle protein EttA
D RoseRS_2026 metal dependent phosphohydrolase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RoseRS_2070 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D RoseRS_0864 putative TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RoseRS_1881 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RoseRS_3894 (Uracil-5)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D RoseRS_3686 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RoseRS_2801 putative RNA methylase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D RoseRS_1035 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D RoseRS_2337 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D RoseRS_2136 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RoseRS_0815 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RoseRS_2111 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D RoseRS_0704 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RoseRS_1302 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RoseRS_1988 tRNA-guanine transglycosylase, various specificities K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RoseRS_0321 hypoxanthine phosphoribosyltransferase K15780 tilS-hprT; bifunctional protein TilS/HprT [EC:6.3.4.19 2.4.2.8]
D RoseRS_4358 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RoseRS_3985 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RoseRS_4357 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RoseRS_0949 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RoseRS_3905 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:rrs03012]
D RoseRS_3027 initiation factor 2B related K03680 EIF2B4; translation initiation factor eIF-2B subunit delta
D RoseRS_3751 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D RoseRS_1032 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D RoseRS_1233 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RoseRS_2018 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D RoseRS_3323 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RoseRS_1187 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RoseRS_4540 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D RoseRS_1188 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D RoseRS_2868 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D RoseRS_2016 ribosome recycling factor K02838 frr; ribosome recycling factor
D RoseRS_3525 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RoseRS_1001 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RoseRS_1163 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D RoseRS_3411 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D RoseRS_3345 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rrs03110]
D RoseRS_0187 ATPase AAA-2 domain protein K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RoseRS_4294 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RoseRS_1731 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RoseRS_4070 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RoseRS_3375 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RoseRS_3663 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RoseRS_4301 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RoseRS_3246 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_3460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_4131 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_1077 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_3001 hypothetical protein K19373 DNAJC28; DnaJ homolog subfamily C member 28
D RoseRS_3459 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RoseRS_1646 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D RoseRS_3094 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D RoseRS_3461 GrpE protein K03687 GRPE; molecular chaperone GrpE
D RoseRS_1929 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D RoseRS_0197 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D RoseRS_2779 Molecular chaperone (small heat shock protein)-like protein K13993 HSP20; HSP20 family protein
D RoseRS_4130 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RoseRS_1076 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RoseRS_1322 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RoseRS_1345 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RoseRS_0798 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D RoseRS_4361 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RoseRS_1848 AAA ATPase, central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RoseRS_0518 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RoseRS_3482 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D RoseRS_0967 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RoseRS_0972 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RoseRS_1794 Uncharacterized component of anaerobic dehydrogenase-like protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D RoseRS_1379 peptidase S8 and S53, subtilisin, kexin, sedolisin K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D RoseRS_0664 peptidase S8 and S53, subtilisin, kexin, sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RoseRS_0678 peptidase S8 and S53, subtilisin, kexin, sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RoseRS_3616 glycoside hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RoseRS_3720 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RoseRS_1333 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RoseRS_1006 thioredoxin K03671 TXN; thioredoxin
D RoseRS_3294 thioredoxin K03671 TXN; thioredoxin
D RoseRS_1818 thioredoxin K05838 ybbN; putative thioredoxin
D RoseRS_1323 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
D RoseRS_1344 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
D RoseRS_0760 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D RoseRS_0325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rrs04131]
D RoseRS_0772 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RoseRS_0928 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RoseRS_3342 ATPase involved in chromosome partitioning-like protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RoseRS_1434 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RoseRS_1851 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RoseRS_0387 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RoseRS_1012 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RoseRS_1428 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RoseRS_4301 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RoseRS_2301 Permease of the major facilitator superfamily-like protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rrs04121]
C 03051 Proteasome [BR:rrs03051]
D RoseRS_4301 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rrs03032]
D RoseRS_1014 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RoseRS_3014 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RoseRS_0056 AAA ATPase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D RoseRS_4109 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RoseRS_4008 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D RoseRS_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RoseRS_1149 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RoseRS_1147 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D RoseRS_0288 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RoseRS_3401 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0828 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_1771 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0091 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RoseRS_4406 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RoseRS_3075 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RoseRS_3588 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RoseRS_1899 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_2006 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_1535 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RoseRS_2783 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RoseRS_3415 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RoseRS_4515 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RoseRS_0233 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_3043 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_0729 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RoseRS_0047 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RoseRS_1430 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rrs03036]
D RoseRS_4109 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RoseRS_4602 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RoseRS_4008 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D RoseRS_1646 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D RoseRS_3094 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D RoseRS_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RoseRS_2466 Ferritin, Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RoseRS_0800 Ferritin, Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RoseRS_0331 condensin subunit Smc K03529 smc; chromosome segregation protein
D RoseRS_0194 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D RoseRS_4629 condensin subunit ScpB K06024 scpB; segregation and condensation protein B
D RoseRS_3793 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RoseRS_3780 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RoseRS_3495 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RoseRS_0820 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RoseRS_3792 Polypeptide-transport-associated domain protein, FtsQ-type K03589 ftsQ; cell division protein FtsQ
D RoseRS_3785 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RoseRS_3794 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RoseRS_1559 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RoseRS_1558 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RoseRS_1557 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RoseRS_0510 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RoseRS_1283 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RoseRS_1282 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RoseRS_2349 cell cycle protein K05837 rodA; rod shape determining protein RodA
D RoseRS_0116 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D RoseRS_4216 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RoseRS_0117 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RoseRS_0831 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RoseRS_2821 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RoseRS_3168 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RoseRS_2216 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RoseRS_0863 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D RoseRS_0860 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D RoseRS_1334 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D RoseRS_2109 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RoseRS_0276 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:rrs03400]
D RoseRS_3679 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RoseRS_0011 Deoxyribodipyrimidine photolyase-like protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RoseRS_3446 Deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RoseRS_3189 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RoseRS_2523 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RoseRS_3465 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RoseRS_0145 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RoseRS_3773 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RoseRS_3464 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RoseRS_4202 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RoseRS_0009 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RoseRS_0318 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RoseRS_0873 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RoseRS_1946 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RoseRS_0614 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RoseRS_2758 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D RoseRS_2008 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RoseRS_4515 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RoseRS_3415 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RoseRS_3848 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RoseRS_3438 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RoseRS_3705 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D RoseRS_3154 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RoseRS_0142 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_2224 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_0060 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RoseRS_1265 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RoseRS_1264 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RoseRS_1158 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RoseRS_3660 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RoseRS_3706 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RoseRS_4014 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D RoseRS_4548 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RoseRS_3173 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RoseRS_3174 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RoseRS_0091 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RoseRS_4406 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RoseRS_3075 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RoseRS_3588 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RoseRS_1899 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_2006 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RoseRS_1535 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RoseRS_3401 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0828 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_1771 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0233 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_3043 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_4111 T/G mismatch-specific endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D RoseRS_3118 recA protein K03553 recA; recombination protein RecA
D RoseRS_3772 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RoseRS_2425 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RoseRS_4363 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RoseRS_1240 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RoseRS_0905 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D RoseRS_2193 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D RoseRS_1732 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RoseRS_2436 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RoseRS_3518 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RoseRS_2125 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RoseRS_1735 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RoseRS_1301 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RoseRS_1533 recombination protein RecR K06187 recR; recombination protein RecR
D RoseRS_0119 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RoseRS_1870 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RoseRS_4330 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RoseRS_3012 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RoseRS_0645 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RoseRS_0729 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RoseRS_0047 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RoseRS_1430 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RoseRS_4008 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D RoseRS_0427 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RoseRS_3117 regulatory protein RecX K03565 recX; regulatory protein
D RoseRS_0076 PHP C-terminal domain protein K02347 polX; DNA polymerase (family X)
D RoseRS_3430 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RoseRS_4563 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D RoseRS_1973 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RoseRS_3754 phosphoesterase, RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rrs03029]
D RoseRS_3751 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D RoseRS_1032 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D RoseRS_2018 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D RoseRS_3323 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RoseRS_1187 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RoseRS_4540 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D RoseRS_1188 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D RoseRS_2181 GTP-binding protein Era K03595 era; GTPase
D RoseRS_2069 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RoseRS_4535 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RoseRS_1979 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RoseRS_0862 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RoseRS_1309 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RoseRS_2947 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RoseRS_3083 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RoseRS_1111 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RoseRS_1143 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RoseRS_3401 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_0828 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_1771 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RoseRS_3246 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_3460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_3461 GrpE protein K03687 GRPE; molecular chaperone GrpE
D RoseRS_4131 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_1077 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_4130 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RoseRS_1076 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RoseRS_1322 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RoseRS_1345 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RoseRS_3459 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RoseRS_0168 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RoseRS_2109 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RoseRS_0224 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RoseRS_4134 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D RoseRS_3965 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RoseRS_4071 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D RoseRS_2912 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D RoseRS_0931 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D RoseRS_2924 SPFH domain, Band 7 family protein K17081 PHB2; prohibitin 2
D RoseRS_4301 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rrs02000]
D RoseRS_1216 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RoseRS_0495 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RoseRS_0494 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RoseRS_2719 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RoseRS_2717 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RoseRS_2272 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RoseRS_0661 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RoseRS_2541 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RoseRS_2270 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RoseRS_0041 ABC transporter, transmembrane region, type 1 K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RoseRS_0040 ABC transporter related K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RoseRS_3935 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits K21397 K21397; ABC transport system ATP-binding/permease protein
D RoseRS_1798 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RoseRS_1797 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D RoseRS_1796 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RoseRS_2294 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D RoseRS_2293 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D RoseRS_0795 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RoseRS_1645 extracellular solute-binding protein, family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RoseRS_1644 Ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein
D RoseRS_1642 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D RoseRS_1641 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RoseRS_0793 ABC-type Fe3+ transport system periplasmic component-like protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RoseRS_0791 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RoseRS_0792 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RoseRS_0790 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RoseRS_1816 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D RoseRS_1814 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D RoseRS_1817 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D RoseRS_1815 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RoseRS_2762 membrane lipoprotein lipid attachment site K24985 ribY; putative riboflavin transport system substrate-binding protein
D RoseRS_2763 binding-protein-dependent transport systems inner membrane component K24986 ribX; putative riboflavin transport system permease protein
D RoseRS_0670 Substrate-binding region of ABC-type glycine betaine transport system K24987 thiY; putative thiamine transport system substrate-binding protein
D RoseRS_0669 binding-protein-dependent transport systems inner membrane component K24988 thiX; putative thiamine transport system permease protein
D RoseRS_0671 ABC transporter related K24989 thiZ; putative thiamine transport system ATP-binding protein
D RoseRS_4593 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RoseRS_4556 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RoseRS_4562 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RoseRS_4594 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RoseRS_0525 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RoseRS_0803 extracellular solute-binding protein, family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RoseRS_0802 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D RoseRS_0801 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D RoseRS_2896 extracellular solute-binding protein, family 1 K10240 cebE; cellobiose transport system substrate-binding protein
D RoseRS_2895 binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein
D RoseRS_2894 binding-protein-dependent transport systems inner membrane component K10242 cebG; cellobiose transport system permease protein
D RoseRS_2726 Monosaccharide-transporting ATPase K10560 rhaP; rhamnose transport system permease protein
D RoseRS_2727 Monosaccharide-transporting ATPase K10561 rhaQ; rhamnose transport system permease protein
D RoseRS_2725 ABC transporter related K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D RoseRS_3058 ABC-type sugar transport system periplasmic component-like protein K10439 rbsB; ribose transport system substrate-binding protein
D RoseRS_4489 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D RoseRS_3055 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D RoseRS_3056 Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D RoseRS_3057 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RoseRS_4566 extracellular solute-binding protein, family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RoseRS_4568 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RoseRS_4567 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RoseRS_1320 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RoseRS_1319 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D RoseRS_1318 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D RoseRS_1317 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D RoseRS_3149 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RoseRS_2818 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RoseRS_0263 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RoseRS_3619 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RoseRS_4248 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RoseRS_1359 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RoseRS_1357 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D RoseRS_3621 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D RoseRS_2819 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D RoseRS_4249 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D RoseRS_1358 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RoseRS_3620 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RoseRS_2820 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RoseRS_4250 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RoseRS_4152 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_3610 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_4157 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RoseRS_4151 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D RoseRS_4156 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D RoseRS_4150 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D RoseRS_4155 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D RoseRS_4148 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RoseRS_4154 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RoseRS_4149 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RoseRS_1595 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RoseRS_1592 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RoseRS_1593 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RoseRS_1594 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RoseRS_4005 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RoseRS_1420 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RoseRS_4004 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein
D RoseRS_4003 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D RoseRS_4002 ABC transporter related K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RoseRS_2975 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_0626 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_1544 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_4104 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RoseRS_2976 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_0624 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_1543 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_4107 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RoseRS_2977 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_0625 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_4108 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RoseRS_2978 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_0622 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1540 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_4105 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RoseRS_2979 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_0627 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1539 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_4106 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RoseRS_1803 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RoseRS_1800 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D RoseRS_1802 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D RoseRS_1801 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RoseRS_1093 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D RoseRS_1094 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D RoseRS_1095 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D RoseRS_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D RoseRS_3050 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_2770 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_4599 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_2808 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0093 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0937 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0725 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0354 ABC-type dipeptide transport system periplasmic component-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0413 ABC-type dipeptide transport system periplasmic component-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RoseRS_0414 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RoseRS_2809 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RoseRS_4598 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RoseRS_3049 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RoseRS_3048 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RoseRS_4597 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RoseRS_0415 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RoseRS_2810 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RoseRS_2318 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RoseRS_2811 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RoseRS_0416 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RoseRS_2812 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RoseRS_0417 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RoseRS_3565 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein
D RoseRS_3566 transport system permease protein K25133 hmuU; heme transport system permease protein
D RoseRS_3564 ABC transporter related K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D RoseRS_3093 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RoseRS_3571 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D RoseRS_3086 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D RoseRS_3088 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D RoseRS_3089 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D RoseRS_3070 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RoseRS_3068 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein
D RoseRS_3067 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein
D RoseRS_3069 ABC transporter related K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RoseRS_1258 periplasmic solute binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D RoseRS_1256 ABC-3 protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D RoseRS_1257 ABC transporter related K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D RoseRS_0561 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D RoseRS_0562 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RoseRS_0170 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RoseRS_0174 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D RoseRS_0560 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D RoseRS_0563 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RoseRS_0169 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RoseRS_1923 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RoseRS_4523 BioY protein K03523 bioY; biotin transport system substrate-specific component
D RoseRS_3452 signal transduction histidine kinase, LytS K16923 qrtT; energy-coupling factor transport system substrate-specific component
D RoseRS_3102 hypothetical protein K16929 K16929; energy-coupling factor transport system substrate-specific component
D RoseRS_3451 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D RoseRS_3101 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D RoseRS_3100 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RoseRS_3450 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RoseRS_1924 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RoseRS_4096 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D RoseRS_3367 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D RoseRS_4089 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RoseRS_0858 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RoseRS_2479 ABC-2 type transporter K25181 ybhS; drug efflux transport system permease protein
D RoseRS_2108 ABC transporter related K25182 ybhF; drug efflux transport system ATP-binding protein
D RoseRS_2106 ABC transporter related K25182 ybhF; drug efflux transport system ATP-binding protein
D RoseRS_2104 secretion protein HlyD family protein K25183 ybhG; membrane fusion protein YbhG
D RoseRS_3830 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein
D RoseRS_3831 ABC-2 type transporter K16906 K16906; fluoroquinolone transport system permease protein
D RoseRS_3832 ABC transporter related K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D RoseRS_0755 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D RoseRS_3568 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D RoseRS_0754 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D RoseRS_0753 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RoseRS_2477 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RoseRS_3208 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RoseRS_4256 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RoseRS_3741 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RoseRS_4618 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RoseRS_1114 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RoseRS_2418 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RoseRS_3279 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RoseRS_3209 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_2666 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_1236 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_2419 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_1284 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_2474 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_4255 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_4617 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_1113 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_3742 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RoseRS_3757 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RoseRS_2317 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RoseRS_2585 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RoseRS_0269 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RoseRS_3419 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RoseRS_0178 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RoseRS_1075 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RoseRS_1203 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RoseRS_0268 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RoseRS_0180 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RoseRS_2431 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RoseRS_3212 cyclic nucleotide-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RoseRS_0810 ABC transporter related K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RoseRS_0708 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RoseRS_2034 hypothetical protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D RoseRS_2243 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D RoseRS_1225 major facilitator superfamily MFS_1 K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D RoseRS_2242 major facilitator superfamily MFS_1 K23677 SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter
D RoseRS_1903 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RoseRS_3165 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RoseRS_3432 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RoseRS_1912 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RoseRS_1063 major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D RoseRS_4401 major facilitator superfamily MFS_1 K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D RoseRS_2877 major facilitator superfamily MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RoseRS_0398 major facilitator superfamily MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RoseRS_2928 drug resistance transporter, EmrB/QacA subfamily K27247 K27247; MFS transporter, DHA2 family, triacylglyceride efflux pump
D RoseRS_1066 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RoseRS_2301 Permease of the major facilitator superfamily-like protein K06902 UMF1; MFS transporter, UMF1 family
D RoseRS_3304 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RoseRS_3303 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D RoseRS_1770 phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D RoseRS_3302 PTS system fructose subfamily IIA component K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D RoseRS_1765 MIP family channel protein K02440 glpF; glycerol uptake facilitator
D RoseRS_2984 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RoseRS_3380 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_2799 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_2768 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_2796 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_3349 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_2520 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_1843 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_1396 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_1463 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D RoseRS_2342 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D RoseRS_2408 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D RoseRS_4557 Mg2+ transporter protein, CorA family protein K03284 corA; magnesium transporter
D RoseRS_4560 Mg2+ transporter protein, CorA family protein K03284 corA; magnesium transporter
D RoseRS_4558 Mg2+ and Co2+ transporter-like protein K03284 corA; magnesium transporter
D RoseRS_2493 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D RoseRS_3197 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RoseRS_4395 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RoseRS_1640 polymorphic outer membrane protein K07279 yfaL; autotransporter family porin
D RoseRS_3282 LrgA family protein K06518 cidA; holin-like protein
D RoseRS_4585 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D RoseRS_1614 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D RoseRS_2067 L-lactate transport K03303 lutP; lactate permease
D RoseRS_2285 C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein
D RoseRS_1975 sodium/calcium exchanger membrane region K07300 chaA; Ca2+:H+ antiporter
D RoseRS_1116 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D RoseRS_3609 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter
D RoseRS_0112 Na+/solute symporter K14393 actP; cation/acetate symporter
D RoseRS_1628 Na+/solute symporter K14393 actP; cation/acetate symporter
D RoseRS_0407 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D RoseRS_4527 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D RoseRS_2088 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein
D RoseRS_3062 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D RoseRS_3063 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D RoseRS_2406 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D RoseRS_2407 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D RoseRS_2087 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D RoseRS_2449 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D RoseRS_4186 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D RoseRS_0812 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D RoseRS_0928 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RoseRS_3342 ATPase involved in chromosome partitioning-like protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RoseRS_1917 arsenical-resistance protein K03325 ACR3; arsenite transporter
D RoseRS_2102 NADH dehydrogenase (quinone) K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D RoseRS_2671 hypothetical protein K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D RoseRS_2101 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D RoseRS_2100 NADH-ubiquinone oxidoreductase, chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RoseRS_2099 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RoseRS_2098 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RoseRS_2097 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D RoseRS_2096 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RoseRS_3077 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RoseRS_0132 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RoseRS_0865 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D RoseRS_0121 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D RoseRS_3176 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D RoseRS_0523 protein of unknown function DUF165 K09125 yhhQ; queuosine precursor transporter
D RoseRS_3785 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RoseRS_4468 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D RoseRS_1915 WD40 domain protein beta Propeller K03641 tolB; TolB protein
D RoseRS_1631 WD40 domain protein beta Propeller K03641 tolB; TolB protein
D RoseRS_2262 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RoseRS_3692 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RoseRS_3693 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RoseRS_4042 Non-specific protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RoseRS_4043 lipopolysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D RoseRS_4270 Non-specific protein-tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D RoseRS_4219 lipopolysaccharide biosynthesis protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D RoseRS_2417 conserved hypothetical protein 374 K20468 K20468; putative heme transporter
D RoseRS_0552 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RoseRS_0553 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RoseRS_0555 Ferrous iron transport protein B domain protein K04759 feoB; ferrous iron transport protein B
D RoseRS_4510 Ferrous iron transport B domain protein K04759 feoB; ferrous iron transport protein B
D RoseRS_0758 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D RoseRS_4564 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D RoseRS_1501 copper resistance protein CopC K07156 copC; copper resistance protein C
D RoseRS_3152 O-antigen polymerase K18814 ictB; putative inorganic carbon (hco3(-)) transporter
D RoseRS_1500 copper resistance protein CopC K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:rrs02044]
D RoseRS_1565 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RoseRS_3354 SAF domain K02279 cpaB; pilus assembly protein CpaB
D RoseRS_1273 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_3353 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_4620 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_1876 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_1274 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_3352 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_2200 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_2202 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_1275 type II secretion system protein K12510 tadB; tight adherence protein B
D RoseRS_3351 type II secretion system protein K12510 tadB; tight adherence protein B
D RoseRS_1276 type II secretion system protein K12511 tadC; tight adherence protein C
D RoseRS_1399 type II secretion system protein K12511 tadC; tight adherence protein C
D RoseRS_3350 type II secretion system protein K12511 tadC; tight adherence protein C
D RoseRS_3601 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RoseRS_3178 protein of unknown function YGGT K02221 yggT; YggT family protein
D RoseRS_0210 hypothetical protein K02221 yggT; YggT family protein
D RoseRS_1429 helix-hairpin-helix motif K02237 comEA; competence protein ComEA
D RoseRS_1609 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D RoseRS_1640 polymorphic outer membrane protein K07279 yfaL; autotransporter family porin
D RoseRS_0823 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RoseRS_3982 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RoseRS_3324 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RoseRS_3983 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D RoseRS_0724 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D RoseRS_1165 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RoseRS_1286 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RoseRS_1050 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RoseRS_3965 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RoseRS_3576 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RoseRS_0983 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D RoseRS_0982 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rrs02042]
D RoseRS_3197 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RoseRS_4395 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rrs02022]
D RoseRS_3817 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RoseRS_2295 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RoseRS_0805 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RoseRS_3737 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RoseRS_4483 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RoseRS_0114 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RoseRS_4049 two component transcriptional regulator, winged helix family K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RoseRS_0195 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RoseRS_0761 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RoseRS_0035 response regulator receiver protein K07668 vicR; two-component system, OmpR family, response regulator VicR
D RoseRS_2290 two component transcriptional regulator, winged helix family K07669 mprA; two-component system, OmpR family, response regulator MprA
D RoseRS_1527 response regulator receiver protein K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RoseRS_4161 two component transcriptional regulator, winged helix family K07672 trcR; two-component system, OmpR family, response regulator TrcR
D RoseRS_3188 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RoseRS_2305 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RoseRS_3355 two component transcriptional regulator, Fis family K02483 K02483; two-component system, OmpR family, response regulator
D RoseRS_2902 response regulator receiver protein K02483 K02483; two-component system, OmpR family, response regulator
D RoseRS_2709 response regulator receiver protein K02483 K02483; two-component system, OmpR family, response regulator
D RoseRS_0612 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RoseRS_3762 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RoseRS_0939 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RoseRS_4041 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D RoseRS_4482 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D RoseRS_1618 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D RoseRS_2364 GAF sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RoseRS_1897 GAF sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RoseRS_0208 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RoseRS_0317 response regulator receiver sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RoseRS_0998 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0036 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0034 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RoseRS_0994 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RoseRS_0205 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D RoseRS_3612 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D RoseRS_2028 GAF sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_2844 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_4039 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RoseRS_4627 GAF sensor signal transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D RoseRS_2361 response regulator receiver and ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR
D RoseRS_4102 response regulator receiver and ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR
D RoseRS_1308 multi-sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:rrs02035]
D RoseRS_0998 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0036 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RoseRS_0995 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_1000 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_0039 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RoseRS_0033 Protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RoseRS_0993 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RoseRS_0034 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RoseRS_0994 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RoseRS_1565 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RoseRS_3601 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RoseRS_3354 SAF domain K02279 cpaB; pilus assembly protein CpaB
D RoseRS_1273 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_3353 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_4620 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D RoseRS_1876 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_1274 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_3352 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_2200 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RoseRS_2202 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rrs04812]
D RoseRS_2409 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein
D RoseRS_3955 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein
D RoseRS_0510 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RoseRS_1283 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RoseRS_3794 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RoseRS_3793 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RoseRS_1559 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RoseRS_1558 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RoseRS_1557 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RoseRS_0116 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D RoseRS_4216 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RoseRS_0117 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RoseRS_0831 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RoseRS_2821 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rrs04147]
D RoseRS_4301 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RoseRS_4532 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RoseRS_1851 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RoseRS_0387 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RoseRS_1473 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RoseRS_1428 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RoseRS_3883 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RoseRS_4131 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_1077 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RoseRS_3246 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_3460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RoseRS_4356 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RoseRS_2498 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RoseRS_0697 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RoseRS_3323 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RoseRS_1187 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RoseRS_0075 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RoseRS_2094 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0623 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_1007 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_2084 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_4612 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_0228 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_3648 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RoseRS_2034 hypothetical protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D RoseRS_0429 Acetyl-CoA acetyltransferase-like protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_4348 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_3911 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RoseRS_0488 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RoseRS_1164 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RoseRS_1214 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RoseRS_0741 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RoseRS_2403 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RoseRS_4058 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RoseRS_4521 amidinotransferase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D RoseRS_2814 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RoseRS_3943 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RoseRS_3819 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RoseRS_1768 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RoseRS_1047 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2715 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_2983 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RoseRS_1752 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RoseRS_0192 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RoseRS_3546 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RoseRS_1990 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RoseRS_0271 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RoseRS_0206 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RoseRS_3003 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RoseRS_2298 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RoseRS_0957 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RoseRS_1722 Glu/Leu/Phe/Val dehydrogenase, C terminal K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RoseRS_4385 glutamate dehydrogenase (NADP) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RoseRS_2562 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RoseRS_2924 SPFH domain, Band 7 family protein K17081 PHB2; prohibitin 2
D RoseRS_3813 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RoseRS_1012 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rrs02048]
D RoseRS_1870 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RoseRS_4330 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RoseRS_3012 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RoseRS_0645 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D RoseRS_3010 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D RoseRS_4329 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D RoseRS_1871 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D RoseRS_0651 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RoseRS_1868 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RoseRS_4335 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RoseRS_1865 CRISPR-associated protein, Cst1 family K19088 cst1; CRISPR-associated protein Cst1
D RoseRS_1866 CRISPR-associated autoregulator, Cst2 family K19075 cst2; CRISPR-associated protein Cst2
D RoseRS_1872 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RoseRS_2603 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RoseRS_4331 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RoseRS_1867 CRISPR-associated protein, Cas5t family K19090 cas5t; CRISPR-associated protein Cas5t
D RoseRS_4333 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D RoseRS_4332 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D RoseRS_4334 CRISPR-associated protein, Csd5d family K19119 cas5d; CRISPR-associated protein Cas5d
D RoseRS_0650 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D RoseRS_0649 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D RoseRS_0648 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D RoseRS_0647 CRISPR-associated protein, Cas5e family K19125 casD; CRISPR system Cascade subunit CasD
D RoseRS_0646 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
D RoseRS_0367 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10
D RoseRS_1860 protein of unknown function DUF324 K19134 csx10; CRISPR-associated protein Csx10
D RoseRS_1446 hypothetical protein K19135 csx14; CRISPR-associated protein Csx14
D RoseRS_2593 CRISPR-associated protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D RoseRS_2591 protein of unknown function DUF324 K19076 cmr2; CRISPR-associated protein Cmr2
D RoseRS_0369 hydrolase of the HD superfamily (permuted catalytic motifs)-like protein K19076 cmr2; CRISPR-associated protein Cmr2
D RoseRS_2589 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D RoseRS_1864 hypothetical protein K19144 csx3; CRISPR-associated protein Csx3
D RoseRS_2687 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RoseRS_0281 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RoseRS_0731 type III restriction enzyme, res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RoseRS_2689 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RoseRS_0735 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RoseRS_0734 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RoseRS_2691 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RoseRS_0736 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RoseRS_0233 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_3043 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RoseRS_2227 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RoseRS_0299 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RoseRS_0375 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RoseRS_4284 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RoseRS_0124 Site-specific DNA-methyltransferase (adenine-specific) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RoseRS_1826 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RoseRS_4184 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RoseRS_4109 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RoseRS_2946 type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D RoseRS_1024 ATPase associated with various cellular activities, AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D RoseRS_4245 restriction endonuclease K07448 mrr; restriction system protein
D RoseRS_0411 restriction endonuclease K07448 mrr; restriction system protein
D RoseRS_1424 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RoseRS_2934 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RoseRS_3307 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RoseRS_3308 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D RoseRS_3416 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D RoseRS_2038 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D RoseRS_2039 prevent-host-death family protein K19159 yefM; antitoxin YefM
D RoseRS_4283 prevent-host-death family protein K19159 yefM; antitoxin YefM
D RoseRS_1435 protein of unknown function UPF0150 K18843 hicB; antitoxin HicB
D RoseRS_2350 phage shock protein C, PspC K03973 pspC; phage shock protein C
D RoseRS_2455 phage shock protein C, PspC K03973 pspC; phage shock protein C
D RoseRS_3932 phage shock protein C, PspC K03973 pspC; phage shock protein C
D RoseRS_0522 phage shock protein C, PspC K03973 pspC; phage shock protein C
D RoseRS_0080 death-on-curing family protein K07341 doc; death on curing protein
D RoseRS_0380 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D RoseRS_0379 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D RoseRS_0021 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RoseRS_3905 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D RoseRS_3906 SpoVT/AbrB domain protein K18829 mvpT; antitoxin VapB
D RoseRS_3794 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RoseRS_0510 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RoseRS_1283 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RoseRS_1695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RoseRS_1601 hypothetical protein K19168 cptA; toxin CptA
D RoseRS_0168 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:rrs04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:rrs04052]
D RoseRS_0103 acyl-coA-binding protein, ACBP K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rrs04090]
C 01504 Antimicrobial resistance genes [BR:rrs01504]
D RoseRS_1604 aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D RoseRS_1981 ribosomal RNA methyltransferase K18845 rmt; 16S rRNA (guanine(1405)-N(7))-methyltransferase [EC:2.1.1.179]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rrs00537]
D RoseRS_1990 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RoseRS_3883 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rrs03100]
D RoseRS_R0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RoseRS_R0037 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RoseRS_R0036 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RoseRS_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0051 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RoseRS_R0031 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RoseRS_R0013 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RoseRS_R0052 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RoseRS_R0056 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RoseRS_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RoseRS_R0014 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RoseRS_R0020 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RoseRS_R0057 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RoseRS_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RoseRS_R0001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RoseRS_R0007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RoseRS_R0053 tRNA-His K14226 tRNA-His; tRNA His
D RoseRS_R0022 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RoseRS_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0026 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RoseRS_R0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RoseRS_R0029 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RoseRS_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D RoseRS_R0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D RoseRS_R0019 tRNA-Met K14230 tRNA-Met; tRNA Met
D RoseRS_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D RoseRS_R0011 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RoseRS_R0038 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RoseRS_R0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RoseRS_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RoseRS_R0050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RoseRS_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RoseRS_R0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RoseRS_R0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RoseRS_R0005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RoseRS_R0046 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RoseRS_R0047 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RoseRS_R0042 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RoseRS_R0045 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RoseRS_R0010 tRNA-Val K14237 tRNA-Val; tRNA Val
D RoseRS_R0023 tRNA-Val K14237 tRNA-Val; tRNA Val
D RoseRS_R0003 tRNA-Val K14237 tRNA-Val; tRNA Val
D RoseRS_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RoseRS_R0032 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RoseRS_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RoseRS_R0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RoseRS_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RoseRS_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RoseRS_R0002 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D RoseRS_R0004 RNA component of RNaseP K01978 rnpB; M1 RNA
D RoseRS_R0048 tmRNA as predicted by Rfam (RF00023), score 106.68 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RoseRS_4595 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RoseRS_1140 luciferase family protein K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D RoseRS_2718 hypothetical protein K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D RoseRS_1226 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D RoseRS_0340 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RoseRS_0342 molybdopterin dehydrogenase, FAD-binding K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RoseRS_0341 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RoseRS_2447 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RoseRS_2904 acyl-CoA dehydrogenase domain protein K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D RoseRS_2460 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RoseRS_3941 reduced coenzyme F420:NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D RoseRS_0958 Electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D RoseRS_4204 FAD dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D RoseRS_1484 Alcohol dehydrogenase, zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RoseRS_3364 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RoseRS_2424 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RoseRS_1505 oxidoreductase, molybdopterin binding K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RoseRS_3631 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RoseRS_1825 alpha/beta hydrolase fold K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RoseRS_3555 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RoseRS_0408 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RoseRS_3539 nickel-dependent hydrogenase, large subunit K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2]
D RoseRS_3540 NADH ubiquinone oxidoreductase, 20 kDa subunit K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2]
D RoseRS_1855 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2]
D RoseRS_0005 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RoseRS_2430 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RoseRS_2148 Pyruvate-formate lyase-activating enzyme-like protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RoseRS_4313 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RoseRS_3811 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RoseRS_2047 GCN5-related N-acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D RoseRS_1238 GCN5-related N-acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D RoseRS_1431 GCN5-related N-acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D RoseRS_1490 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RoseRS_2120 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RoseRS_2637 glycosyl transferase, group 1 K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D RoseRS_1218 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D RoseRS_1341 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D RoseRS_0868 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RoseRS_0326 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RoseRS_3339 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RoseRS_0609 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RoseRS_3363 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182]
D RoseRS_3521 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D RoseRS_1080 Polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D RoseRS_3013 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D RoseRS_1145 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RoseRS_3980 Non-specific serine/threonine protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1]
D RoseRS_0804 integral membrane sensor signal transduction histidine kinase K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3]
D RoseRS_3860 Formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D RoseRS_0050 succinyl-CoA:(R)-citramalate CoA-transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D RoseRS_2355 alpha/beta hydrolase fold K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D RoseRS_4194 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RoseRS_0066 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RoseRS_2271 protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D RoseRS_2131 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RoseRS_3597 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D RoseRS_0702 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RoseRS_0316 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RoseRS_0374 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D RoseRS_0371 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D RoseRS_2835 hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D RoseRS_3665 beta-lactamase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RoseRS_0690 N-acetylmuramoyl-L-alanine amidase, family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RoseRS_1052 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RoseRS_0503 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RoseRS_0663 LmbE family protein K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D RoseRS_3646 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D RoseRS_3950 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D RoseRS_1608 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D RoseRS_4011 polysaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D RoseRS_2960 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RoseRS_3184 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RoseRS_1888 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RoseRS_0692 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RoseRS_1835 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RoseRS_0587 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RoseRS_3530 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D RoseRS_1694 UV-damage endonuclease K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D RoseRS_0049 (R)-citramalyl-CoA lyase K18314 E4.1.3.46; (R)-citramalyl-CoA lyase [EC:4.1.3.46]
D RoseRS_3410 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RoseRS_0175 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D RoseRS_1342 ExsB family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D RoseRS_0590 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D RoseRS_1648 RbsD or FucU transport K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D RoseRS_2729 protein of unknown function DUF718 K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D RoseRS_2438 Peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RoseRS_3331 cysteinyl-tRNA synthetase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D RoseRS_2092 acetone carboxylase, alpha subunit K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6]
D RoseRS_2091 acetone carboxylase, beta subunit K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6]
D RoseRS_2093 acetone carboxylase, gamma subunit K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6]
D RoseRS_0920 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RoseRS_2450 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RoseRS_0463 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D RoseRS_3404 putative signal transduction protein with CBS domains K04767 acuB; acetoin utilization protein AcuB
D RoseRS_4458 protein of unknown function DUF224, cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RoseRS_4459 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RoseRS_2565 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
D RoseRS_1550 Rare lipoprotein A K20628 exlX; expansin
C 99982 Energy metabolism
D RoseRS_4019 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D RoseRS_0711 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D RoseRS_0719 nitrogen-fixing NifU domain protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D RoseRS_1200 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB
D RoseRS_2672 NADH-ubiquinone oxidoreductase, chain 49kDa K14090 echE; ech hydrogenase subunit E
D RoseRS_2668 NADH ubiquinone oxidoreductase, 20 kDa subunit K14105 ehaN; energy-converting hydrogenase A subunit N
D RoseRS_2299 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D RoseRS_0956 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D RoseRS_0959 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D RoseRS_3520 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D RoseRS_3519 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RoseRS_3441 protein of unknown function DUF540 K06203 cysZ; CysZ protein
D RoseRS_3632 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D RoseRS_3251 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RoseRS_0089 conserved hypothetical protein 374 K07027 K07027; glycosyltransferase 2 family protein
D RoseRS_4413 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D RoseRS_3582 conserved hypothetical protein 374 K07027 K07027; glycosyltransferase 2 family protein
D RoseRS_4079 conserved hypothetical protein 374 K07027 K07027; glycosyltransferase 2 family protein
D RoseRS_3900 conserved hypothetical protein 374 K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D RoseRS_0578 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
D RoseRS_4526 Glyoxalase/bleomycin resistance protein/dioxygenase K15975 K15975; glyoxalase family protein
D RoseRS_2931 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
D RoseRS_1582 exonuclease of the beta-lactamase fold involved in RNA processing-like protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D RoseRS_2245 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RoseRS_3661 trigger factor K03545 tig; trigger factor
D RoseRS_1504 Ferric reductase domain protein transmembrane component, N-terminal domain K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RoseRS_0189 SsrA-binding protein K03664 smpB; SsrA-binding protein
D RoseRS_0973 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D RoseRS_0974 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RoseRS_0975 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RoseRS_2556 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D RoseRS_3748 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D RoseRS_2813 OsmC family protein K07397 yhfA; putative redox protein
D RoseRS_1367 conserved hypothetical selenoprotein K07401 K07401; selenoprotein W-related protein
D RoseRS_0501 predicted sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis K07402 xdhC; xanthine dehydrogenase accessory factor
D RoseRS_1336 Nodulation efficiency protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D RoseRS_3624 methylated-DNA-(protein)-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D RoseRS_0239 protein of unknown function DUF1156 K07445 K07445; putative DNA methylase
D RoseRS_0767 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RoseRS_1010 HhH-GPD family protein K07457 K07457; endonuclease III related protein
D RoseRS_1723 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D RoseRS_4590 DNA protecting protein DprA K04096 smf; DNA processing protein
D RoseRS_1215 Translin K07477 K07477; translin
D RoseRS_3807 AAA ATPase, central domain protein K07478 ycaJ; putative ATPase
D RoseRS_0353 hypothetical protein K07484 K07484; transposase
D RoseRS_4455 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2843 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_1737 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_1643 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_1511 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2280 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2281 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2288 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_3125 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_3803 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_3255 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_3309 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2833 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2920 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2558 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2900 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2915 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2941 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_3703 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_4514 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_4517 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_4589 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0072 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0154 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0433 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0619 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0584 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0870 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0925 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_3633 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0821 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0777 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_0788 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_1041 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_3874 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_3882 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_1204 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_1531 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_1627 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_1326 transposase, IS111A/IS1328/IS1533 K07486 K07486; transposase
D RoseRS_2540 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D RoseRS_0733 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D RoseRS_2688 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D RoseRS_4182 phage shock protein A, PspA K03969 pspA; phage shock protein A
D RoseRS_1534 conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RoseRS_1071 Na+/melibiose symporter and related transporter-like protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RoseRS_4303 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RoseRS_2771 putative hydroxymethylpyrimidine transporter CytX K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RoseRS_2711 YidE/YbjL duplication K07085 K07085; putative transport protein
C 99978 Cell growth
D RoseRS_3964 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D RoseRS_3527 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D RoseRS_0329 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
D RoseRS_0200 hypothetical protein K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D RoseRS_0100 GTP-binding protein TypA K06207 typA; GTP-binding protein
D RoseRS_3529 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D RoseRS_0916 CBS domain containing protein K07182 K07182; CBS domain-containing protein
D RoseRS_0917 CBS domain containing protein K07182 K07182; CBS domain-containing protein
D RoseRS_1895 CBS domain containing protein K07182 K07182; CBS domain-containing protein
D RoseRS_2007 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D RoseRS_3358 KaiB domain protein K08481 kaiB; circadian clock protein KaiB
D RoseRS_3359 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D RoseRS_0530 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RoseRS_4067 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D RoseRS_2316 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D RoseRS_3213 Multidrug resistance efflux pump-like protein K02005 ABC.CD.TX; HlyD family secretion protein
D RoseRS_0267 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D RoseRS_3638 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D RoseRS_4231 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D RoseRS_4302 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D RoseRS_0757 hypothetical protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D RoseRS_0529 helix-turn-helix domain protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D RoseRS_0992 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D RoseRS_0310 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D RoseRS_4153 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D RoseRS_4213 Membrane protein TerC possibly involved in tellurium resistance-like protein K05794 terC; tellurite resistance protein TerC
D RoseRS_4624 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D RoseRS_1587 ABC transporter related K05781 phnK; putative phosphonate transport system ATP-binding protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RoseRS_3247 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D RoseRS_2921 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RoseRS_2258 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RoseRS_1623 helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RoseRS_0783 globin K06886 glbN; hemoglobin
D RoseRS_0335 Patatin K07001 K07001; NTE family protein
D RoseRS_2164 Patatin K07001 K07001; NTE family protein
D RoseRS_0250 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D RoseRS_1151 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D RoseRS_3606 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D RoseRS_3977 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D RoseRS_2923 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D RoseRS_0712 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RoseRS_0709 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RoseRS_0915 phosphoribosyltransferase-like protein K07100 K07100; putative phosphoribosyl transferase
D RoseRS_4117 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D RoseRS_0718 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D RoseRS_2267 membrane protein-like protein K02862 ctaG; putative membrane protein
D RoseRS_3547 membrane protein of unknown function K08972 K08972; putative membrane protein
D RoseRS_3873 protein of unknown function DUF368 K08974 K08974; putative membrane protein
C 99997 Function unknown
D RoseRS_0147 Radical SAM domain protein K06871 K06871; uncharacterized protein
D RoseRS_3391 Radical SAM domain protein K06871 K06871; uncharacterized protein
D RoseRS_4533 DRTGG domain protein K06873 K06873; uncharacterized protein
D RoseRS_2279 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D RoseRS_1782 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein K06889 K06889; uncharacterized protein
D RoseRS_2170 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein K06889 K06889; uncharacterized protein
D RoseRS_4242 hypothetical protein K06889 K06889; uncharacterized protein
D RoseRS_1665 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D RoseRS_1657 phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D RoseRS_1976 CoA-binding domain protein K06929 K06929; uncharacterized protein
D RoseRS_2875 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D RoseRS_3915 protein of unknown function, ATP binding K06945 K06945; uncharacterized protein
D RoseRS_2141 small GTP-binding protein K06945 K06945; uncharacterized protein
D RoseRS_4476 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D RoseRS_3549 ICC-like phosphoesterase-like protein K06953 K06953; uncharacterized protein
D RoseRS_1288 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D RoseRS_3314 hypothetical protein K06962 K06962; uncharacterized protein
D RoseRS_0541 photosystem I assembly BtpA K06971 K06971; uncharacterized protein
D RoseRS_3740 peptidase, membrane zinc metallopeptidase, putative K06973 K06973; uncharacterized protein
D RoseRS_2828 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein
D RoseRS_2673 pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07006 K07006; uncharacterized protein
D RoseRS_0811 SufBD protein K07033 K07033; uncharacterized protein
D RoseRS_2838 amidohydrolase 2 K07045 K07045; uncharacterized protein
D RoseRS_2750 amidohydrolase 2 K07045 K07045; uncharacterized protein
D RoseRS_2332 hypothetical protein K07063 K07063; uncharacterized protein
D RoseRS_0428 protein of unknown function DUF35 K07068 K07068; uncharacterized protein
D RoseRS_2118 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein
D RoseRS_2453 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_0900 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_2529 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_2532 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_0274 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_3447 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_3457 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_0547 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_0844 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_3557 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_2568 hypothetical protein K07075 K07075; uncharacterized protein
D RoseRS_3517 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RoseRS_3440 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D RoseRS_1985 protein of unknown function DUF897 K07086 K07086; uncharacterized protein
D RoseRS_1707 permease K07089 K07089; uncharacterized protein
D RoseRS_0592 permease K07089 K07089; uncharacterized protein
D RoseRS_2089 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D RoseRS_1716 protein of unknown function DUF839 K07093 K07093; uncharacterized protein
D RoseRS_2678 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D RoseRS_0537 metallophosphoesterase K07096 K07096; uncharacterized protein
D RoseRS_4338 metallophosphoesterase K07096 K07096; uncharacterized protein
D RoseRS_0248 metallophosphoesterase K07098 K07098; uncharacterized protein
D RoseRS_0730 metallophosphoesterase K07099 K07099; uncharacterized protein
D RoseRS_1489 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein
D RoseRS_3239 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D RoseRS_0746 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RoseRS_0773 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RoseRS_3912 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RoseRS_0181 ATPase (AAA+ superfamily)-like protein K07133 K07133; uncharacterized protein
D RoseRS_0455 protein of unknown function DUF418 K07148 K07148; uncharacterized protein
D RoseRS_0885 peptidase S16, lon domain protein K07157 K07157; uncharacterized protein
D RoseRS_2165 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D RoseRS_0535 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D RoseRS_3917 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D RoseRS_0115 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D RoseRS_1277 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D RoseRS_2760 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D RoseRS_3598 GatB/Yqey domain protein K09117 K09117; uncharacterized protein
D RoseRS_0327 protein of unknown function DUF82 K09122 K09122; uncharacterized protein
D RoseRS_1110 protein of unknown function DUF355 K09129 K09129; uncharacterized protein
D RoseRS_4352 protein of unknown function DUF711 K09157 K09157; uncharacterized protein
D RoseRS_0339 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D RoseRS_0227 amino acid-binding ACT domain protein K09707 K09707; uncharacterized protein
D RoseRS_2113 protein of unknown function DUF309 K09763 K09763; uncharacterized protein
D RoseRS_0884 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D RoseRS_3528 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D RoseRS_0042 protein of unknown function DUF454 K09790 K09790; uncharacterized protein
D RoseRS_3442 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D RoseRS_0832 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D RoseRS_0714 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D RoseRS_3853 conserved hypothetical protein K09822 K09822; uncharacterized protein
D RoseRS_3033 protein of unknown function DUF1006 K09927 K09927; uncharacterized protein
D RoseRS_3545 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D RoseRS_3453 conserved hypothetical protein K09992 K09992; uncharacterized protein
D RoseRS_2632 exonuclease-like protein K07502 yprB; uncharacterized protein
D RoseRS_3750 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024