+D GENES KO
#
KEGG Orthology (KO) - Rickettsia typhi TH1527
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rtt00010]
D RTTH1527_02335 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RTTH1527_01225 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RTTH1527_01230 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RTTH1527_02505 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00020 Citrate cycle (TCA cycle) [PATH:rtt00020]
D RTTH1527_03995 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RTTH1527_03780 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RTTH1527_01245 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RTTH1527_00830 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RTTH1527_00825 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02060 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RTTH1527_02065 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RTTH1527_00575 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RTTH1527_00420 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RTTH1527_00565 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RTTH1527_00570 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RTTH1527_03160 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RTTH1527_01785 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RTTH1527_01225 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RTTH1527_01230 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RTTH1527_02505 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway
D RTTH1527_01410 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00040 Pentose and glucuronate interconversions
D RTTH1527_03685 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00051 Fructose and mannose metabolism [PATH:rtt00051]
D RTTH1527_02410 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RTTH1527_01410 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism
D RTTH1527_01575 sugar epimerase K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2]
C 00053 Ascorbate and aldarate metabolism
D RTTH1527_03685 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:rtt00500]
D RTTH1527_03360 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rtt00520]
D RTTH1527_02165 UDP-N-acetylglucosamine pyrophosphorylase K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23]
D RTTH1527_02740 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RTTH1527_01165 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RTTH1527_01580 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RTTH1527_03685 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RTTH1527_01575 sugar epimerase K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RTTH1527_02410 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:rtt00620]
D RTTH1527_01225 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RTTH1527_01230 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RTTH1527_02505 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_00120 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RTTH1527_00125 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RTTH1527_01765 bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RTTH1527_01785 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RTTH1527_03160 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RTTH1527_02335 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rtt00630]
D RTTH1527_01785 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RTTH1527_03995 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RTTH1527_03780 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RTTH1527_00465 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RTTH1527_02925 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RTTH1527_02930 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RTTH1527_02350 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RTTH1527_03500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:rtt00640]
D RTTH1527_00120 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RTTH1527_00125 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RTTH1527_02925 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RTTH1527_02930 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RTTH1527_02065 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RTTH1527_02060 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:rtt00650]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RTTH1527_03880 poly(3-hydroxyalkanoate) synthetase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RTTH1527_03475 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RTTH1527_03240 poly-beta-hydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RTTH1527_00465 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RTTH1527_00575 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RTTH1527_00420 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RTTH1527_00565 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RTTH1527_00570 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
C 00660 C5-Branched dibasic acid metabolism
D RTTH1527_02065 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RTTH1527_02060 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:rtt00562]
D RTTH1527_01120 extragenic suppressor protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rtt00190]
D RTTH1527_01695 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RTTH1527_01690 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RTTH1527_01685 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RTTH1527_01680 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RTTH1527_01675 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RTTH1527_00095 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RTTH1527_03770 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RTTH1527_03765 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RTTH1527_03760 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RTTH1527_03735 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RTTH1527_03740 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RTTH1527_03745 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RTTH1527_03750 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RTTH1527_02545 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RTTH1527_00575 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RTTH1527_00420 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RTTH1527_00565 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RTTH1527_00570 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RTTH1527_01270 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RTTH1527_01275 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RTTH1527_01280 cytochrome c1, heme protein precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RTTH1527_01005 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RTTH1527_01010 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RTTH1527_01190 cytochrome c K08738 CYC; cytochrome c
D RTTH1527_03800 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RTTH1527_03790 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RTTH1527_03795 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RTTH1527_03805 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RTTH1527_03785 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RTTH1527_00515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RTTH1527_00525 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RTTH1527_00530 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RTTH1527_00520 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RTTH1527_02785 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rtt00680]
D RTTH1527_03500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RTTH1527_01785 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RTTH1527_00120 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RTTH1527_00125 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
C 00910 Nitrogen metabolism [PATH:rtt00910]
D RTTH1527_03580 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RTTH1527_02350 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00920 Sulfur metabolism
D RTTH1527_01400 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rtt00061]
D RTTH1527_03605 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RTTH1527_03465 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RTTH1527_03650 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RTTH1527_03610 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RTTH1527_03600 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RTTH1527_00035 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RTTH1527_01725 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rtt00071]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RTTH1527_02940 acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism
D RTTH1527_02235 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:rtt00564]
D RTTH1527_02110 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RTTH1527_02235 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RTTH1527_03875 hypothetical protein K17717 pld; phospholipase D [EC:3.1.4.4]
D RTTH1527_02940 acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D RTTH1527_02020 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RTTH1527_01135 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RTTH1527_01130 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RTTH1527_03535 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RTTH1527_00395 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D RTTH1527_03875 hypothetical protein K17717 pld; phospholipase D [EC:3.1.4.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rtt01040]
D RTTH1527_00450 Acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rtt00230]
D RTTH1527_01025 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RTTH1527_02345 putative cytoplasmic protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RTTH1527_00365 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RTTH1527_03620 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RTTH1527_02435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RTTH1527_02430 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RTTH1527_00320 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D RTTH1527_01385 guanosine pentaphosphate phosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RTTH1527_03035 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:rtt00240]
D RTTH1527_00705 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RTTH1527_00365 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RTTH1527_03855 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RTTH1527_01795 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RTTH1527_02470 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RTTH1527_00295 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RTTH1527_02435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RTTH1527_02430 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RTTH1527_03255 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RTTH1527_01890 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RTTH1527_01420 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rtt00250]
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RTTH1527_03580 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RTTH1527_02350 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00260 Glycine, serine and threonine metabolism [PATH:rtt00260]
D RTTH1527_03550 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RTTH1527_01490 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RTTH1527_03500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RTTH1527_03980 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_01135 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:rtt00270]
D RTTH1527_03675 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RTTH1527_02345 putative cytoplasmic protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RTTH1527_03550 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RTTH1527_01490 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RTTH1527_02040 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RTTH1527_01785 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00280 Valine, leucine and isoleucine degradation [PATH:rtt00280]
D RTTH1527_02040 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RTTH1527_02925 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RTTH1527_02930 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rtt00290]
D RTTH1527_02040 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:rtt00300]
D RTTH1527_03550 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RTTH1527_01490 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RTTH1527_02045 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RTTH1527_00670 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RTTH1527_00900 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RTTH1527_04145 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RTTH1527_01975 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RTTH1527_02820 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RTTH1527_02815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rtt00310]
D RTTH1527_00825 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:rtt00220]
D RTTH1527_02350 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RTTH1527_03580 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00360 Phenylalanine metabolism
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism [PATH:rtt00380]
D RTTH1527_00825 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rtt00400]
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:rtt00430]
D RTTH1527_03580 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RTTH1527_00125 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RTTH1527_00120 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D RTTH1527_04125 phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rtt00450]
D RTTH1527_02125 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RTTH1527_02440 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RTTH1527_03250 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rtt00460]
D RTTH1527_03360 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RTTH1527_03500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rtt00470]
D RTTH1527_00195 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RTTH1527_01170 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RTTH1527_01950 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RTTH1527_01975 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:rtt00480]
D RTTH1527_00640 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RTTH1527_02325 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RTTH1527_01245 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rtt00540]
D RTTH1527_00030 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RTTH1527_01195 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RTTH1527_00040 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RTTH1527_03435 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RTTH1527_01515 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RTTH1527_03380 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RTTH1527_02390 sugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RTTH1527_00330 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RTTH1527_01800 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RTTH1527_00225 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RTTH1527_03375 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rtt00541]
D RTTH1527_01575 sugar epimerase K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RTTH1527_03685 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RTTH1527_01570 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RTTH1527_02410 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RTTH1527_01580 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:rtt00550]
D RTTH1527_02740 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RTTH1527_01165 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RTTH1527_01160 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RTTH1527_01950 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RTTH1527_02820 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RTTH1527_01170 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RTTH1527_02815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RTTH1527_02025 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RTTH1527_02810 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RTTH1527_01960 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RTTH1527_03820 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RTTH1527_00905 bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RTTH1527_02670 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RTTH1527_02680 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RTTH1527_01840 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rtt00730]
D RTTH1527_02310 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_02315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_03035 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
D RTTH1527_02565 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:rtt00760]
D RTTH1527_02100 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RTTH1527_04085 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RTTH1527_04090 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RTTH1527_00270 NAD(p) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:rtt00770]
D RTTH1527_03440 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RTTH1527_02730 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RTTH1527_02040 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:rtt00780]
D RTTH1527_03610 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RTTH1527_03600 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RTTH1527_00035 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RTTH1527_01725 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RTTH1527_02525 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rtt00785]
D RTTH1527_04155 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RTTH1527_03495 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_01225 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RTTH1527_01230 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RTTH1527_02505 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RTTH1527_00830 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RTTH1527_00825 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:rtt00790]
D RTTH1527_01810 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RTTH1527_02540 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RTTH1527_00820 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RTTH1527_02870 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RTTH1527_03305 trans-regulatory protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RTTH1527_00280 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:rtt00670]
D RTTH1527_02445 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RTTH1527_03500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RTTH1527_00975 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RTTH1527_01420 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RTTH1527_02200 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rtt00860]
D RTTH1527_03980 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RTTH1527_01540 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_02955 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_02555 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RTTH1527_02225 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RTTH1527_04200 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RTTH1527_04185 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RTTH1527_04190 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RTTH1527_04195 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rtt00130]
D RTTH1527_03265 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RTTH1527_03885 3-polyprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RTTH1527_02565 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RTTH1527_02950 bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RTTH1527_02645 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RTTH1527_03235 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RTTH1527_00875 ubiquinone biosynthesis protein coq7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rtt00900]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RTTH1527_02565 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RTTH1527_02160 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RTTH1527_02285 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RTTH1527_02025 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:rtt00907]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D RTTH1527_01570 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rtt00946]
D RTTH1527_03360 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:rtt00261]
D RTTH1527_03550 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RTTH1527_01490 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RTTH1527_02045 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RTTH1527_00670 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rtt00521]
D RTTH1527_01120 extragenic suppressor protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RTTH1527_01570 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D RTTH1527_03465 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RTTH1527_03600 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RTTH1527_01725 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RTTH1527_03605 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rtt00999]
D RTTH1527_03675 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RTTH1527_03360 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rtt00362]
D RTTH1527_01875 protocatechuate-3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D RTTH1527_02565 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:rtt00930]
D RTTH1527_02640 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
D RTTH1527_01875 protocatechuate-3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rtt03020]
D RTTH1527_00630 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RTTH1527_00635 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RTTH1527_03020 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RTTH1527_02735 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rtt03010]
D RTTH1527_02465 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RTTH1527_00235 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RTTH1527_03110 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RTTH1527_01635 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RTTH1527_03055 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RTTH1527_00445 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RTTH1527_00590 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RTTH1527_03070 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RTTH1527_01100 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RTTH1527_03145 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RTTH1527_03025 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RTTH1527_00585 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RTTH1527_03030 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RTTH1527_03075 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RTTH1527_02380 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RTTH1527_04160 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RTTH1527_03095 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RTTH1527_00440 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RTTH1527_03120 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RTTH1527_03010 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RTTH1527_02910 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RTTH1527_00615 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RTTH1527_03125 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RTTH1527_03140 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RTTH1527_03135 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RTTH1527_03080 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RTTH1527_03065 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RTTH1527_00625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RTTH1527_00435 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RTTH1527_00620 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RTTH1527_00610 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RTTH1527_01095 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RTTH1527_03090 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RTTH1527_03045 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RTTH1527_03105 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RTTH1527_03015 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RTTH1527_03060 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RTTH1527_00110 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RTTH1527_02880 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RTTH1527_03540 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RTTH1527_03115 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RTTH1527_03130 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RTTH1527_03085 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RTTH1527_02865 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RTTH1527_03545 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RTTH1527_00175 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RTTH1527_03100 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RTTH1527_03050 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RTTH1527_00170 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RTTH1527_03655 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RTTH1527_04165 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RTTH1527_02885 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RTTH1527_02875 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RTTH1527_02175 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RTTH1527_r04275 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RTTH1527_r04277 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RTTH1527_r04273 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rtt00970]
D RTTH1527_t04245 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RTTH1527_t04239 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RTTH1527_t04233 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RTTH1527_t04243 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RTTH1527_t04267 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RTTH1527_t04221 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RTTH1527_t04237 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RTTH1527_t04223 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RTTH1527_t04235 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RTTH1527_t04209 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RTTH1527_t04249 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RTTH1527_t04253 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RTTH1527_t04259 tRNA-His K14226 tRNA-His; tRNA His
D RTTH1527_t04227 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RTTH1527_t04247 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RTTH1527_t04269 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RTTH1527_t04257 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RTTH1527_t04225 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RTTH1527_t04263 tRNA-Met K14230 tRNA-Met; tRNA Met
D RTTH1527_t04211 tRNA-Met K14230 tRNA-Met; tRNA Met
D RTTH1527_t04219 tRNA-Met K14230 tRNA-Met; tRNA Met
D RTTH1527_t04207 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RTTH1527_t04265 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RTTH1527_t04261 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RTTH1527_t04229 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RTTH1527_t04231 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RTTH1527_t04217 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RTTH1527_t04271 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RTTH1527_t04213 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RTTH1527_t04215 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RTTH1527_t04255 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RTTH1527_t04241 tRNA-Val K14237 tRNA-Val; tRNA Val
D RTTH1527_t04251 tRNA-Val K14237 tRNA-Val; tRNA Val
D RTTH1527_01540 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_02955 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_00690 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RTTH1527_00685 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RTTH1527_00695 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RTTH1527_04055 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RTTH1527_00655 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RTTH1527_04025 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RTTH1527_04020 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RTTH1527_01035 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RTTH1527_03705 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RTTH1527_00240 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RTTH1527_03250 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RTTH1527_00975 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RTTH1527_03270 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RTTH1527_02005 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RTTH1527_02920 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RTTH1527_01755 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RTTH1527_00315 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RTTH1527_01815 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RTTH1527_01450 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RTTH1527_01985 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RTTH1527_01990 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RTTH1527_02630 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RTTH1527_02230 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rtt03060]
D RTTH1527_03040 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RTTH1527_00600 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RTTH1527_00250 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RTTH1527_02765 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RTTH1527_00100 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RTTH1527_02760 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RTTH1527_00400 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RTTH1527_02720 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RTTH1527_00290 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D RTTH1527_00795 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RTTH1527_03665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RTTH1527_03530 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D RTTH1527_03700 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RTTH1527_00090 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RTTH1527_01940 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rtt04122]
D RTTH1527_02310 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_02315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_01440 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rtt03018]
D RTTH1527_01105 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RTTH1527_01205 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RTTH1527_02385 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RTTH1527_03180 ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RTTH1527_02485 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RTTH1527_02105 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RTTH1527_00855 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RTTH1527_02970 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RTTH1527_00065 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rtt03030]
D RTTH1527_03445 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RTTH1527_03680 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RTTH1527_04100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RTTH1527_00790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RTTH1527_00870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RTTH1527_04140 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RTTH1527_01995 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RTTH1527_02570 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RTTH1527_04070 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RTTH1527_03960 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RTTH1527_03425 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RTTH1527_00945 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RTTH1527_03390 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rtt03410]
D RTTH1527_03515 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RTTH1527_01665 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RTTH1527_04000 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RTTH1527_01220 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RTTH1527_03220 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RTTH1527_02495 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RTTH1527_03390 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rtt03420]
D RTTH1527_02825 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RTTH1527_03955 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RTTH1527_00950 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RTTH1527_02705 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RTTH1527_02135 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RTTH1527_03390 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rtt03430]
D RTTH1527_01405 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RTTH1527_04170 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D RTTH1527_02135 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RTTH1527_03215 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RTTH1527_01660 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RTTH1527_02495 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RTTH1527_03960 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RTTH1527_03680 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RTTH1527_01995 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RTTH1527_04100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RTTH1527_00870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RTTH1527_00790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RTTH1527_03445 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RTTH1527_04140 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RTTH1527_03390 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rtt03440]
D RTTH1527_02495 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RTTH1527_03960 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RTTH1527_00490 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D RTTH1527_02595 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RTTH1527_02090 recR; recombination protein RecR K06187 recR; recombination protein RecR
D RTTH1527_03595 recA; recombinase A K03553 recA; recombination protein RecA
D RTTH1527_01825 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RTTH1527_01830 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RTTH1527_00075 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RTTH1527_02805 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RTTH1527_03680 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RTTH1527_01995 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RTTH1527_04100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RTTH1527_00870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RTTH1527_00790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RTTH1527_03445 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RTTH1527_04140 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RTTH1527_02560 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rtt02010]
D RTTH1527_00200 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RTTH1527_03415 ABC transporter substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RTTH1527_00190 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RTTH1527_00185 ribonucleotide ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RTTH1527_00060 zinc/manganese ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein
D RTTH1527_02945 zinc/manganese ABC transporter permease protein K09816 znuB; zinc transport system permease protein
D RTTH1527_03950 metal transport ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RTTH1527_01535 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D RTTH1527_00020 O-antigen export system permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D RTTH1527_00015 O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RTTH1527_03325 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D RTTH1527_03330 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RTTH1527_03930 heme exporter protein C K02195 ccmC; heme exporter protein C
D RTTH1527_01260 heme exporter protein B K02194 ccmB; heme exporter protein B
D RTTH1527_03755 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RTTH1527_04135 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D RTTH1527_03640 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D RTTH1527_02405 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RTTH1527_01835 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RTTH1527_00960 ABC transporter ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RTTH1527_01485 alkaline proteinase secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:rtt03070]
D RTTH1527_01050 outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D RTTH1527_02765 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RTTH1527_00100 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RTTH1527_00600 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RTTH1527_00250 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RTTH1527_03040 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RTTH1527_02760 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RTTH1527_00400 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RTTH1527_02720 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RTTH1527_03665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RTTH1527_00290 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D RTTH1527_00795 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RTTH1527_03530 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D RTTH1527_03700 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RTTH1527_00160 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3
D RTTH1527_01345 VirB9-like conjugal transfer protein precursor K03204 virB9; type IV secretion system protein VirB9
D RTTH1527_01365 VirB9 protein precursor of the type IV secretion system K03204 virB9; type IV secretion system protein VirB9
D RTTH1527_00130 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_00135 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_00140 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_00145 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_00150 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_01350 VirB8-like protein of type IV secretion system K03203 virB8; type IV secretion system protein VirB8
D RTTH1527_01360 VirB8-like protein of the Type IV secretion system K03203 virB8; type IV secretion system protein VirB8
D RTTH1527_01370 VirB10 protein of the type IV secretion system K03195 virB10; type IV secretion system protein VirB10
D RTTH1527_03710 VirB4 protein precursor K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D RTTH1527_00155 type IV secretion system ATPase VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D RTTH1527_01375 type IV secretion system ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D RTTH1527_01380 type IV secretion system component VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rtt02020]
D RTTH1527_02030 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RTTH1527_02035 response regulator protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RTTH1527_00555 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RTTH1527_02840 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RTTH1527_02350 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RTTH1527_02905 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RTTH1527_02655 nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RTTH1527_01075 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D RTTH1527_01110 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RTTH1527_00285 transcriptional activator protein CzcR K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RTTH1527_01270 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RTTH1527_01275 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RTTH1527_01280 cytochrome c1, heme protein precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RTTH1527_01190 cytochrome c K08738 CYC; cytochrome c
D RTTH1527_01005 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RTTH1527_01010 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RTTH1527_01050 outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D RTTH1527_01580 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D RTTH1527_01270 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rtt02024]
D RTTH1527_00400 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RTTH1527_00600 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RTTH1527_00250 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RTTH1527_03040 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RTTH1527_02760 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RTTH1527_02720 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RTTH1527_03665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RTTH1527_00290 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D RTTH1527_00795 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D RTTH1527_04065 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rtt01501]
D RTTH1527_02265 murein peptide permease protein AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RTTH1527_01050 outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D RTTH1527_03820 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RTTH1527_02670 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RTTH1527_02680 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rtt01502]
D RTTH1527_01170 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RTTH1527_00195 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RTTH1527_02815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RTTH1527_02810 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RTTH1527_01960 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rtt01503]
D RTTH1527_00555 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RTTH1527_01050 outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D RTTH1527_00030 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rtt01000]
C 01001 Protein kinases [BR:rtt01001]
D RTTH1527_02030 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RTTH1527_02905 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RTTH1527_01075 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rtt01009]
D RTTH1527_03975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:rtt01002]
D RTTH1527_01940 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RTTH1527_01915 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D RTTH1527_00640 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RTTH1527_04145 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RTTH1527_03900 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RTTH1527_02290 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RTTH1527_00835 carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RTTH1527_00425 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RTTH1527_00735 membrane associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RTTH1527_00555 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RTTH1527_00800 post-proline cleaving enzyme K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RTTH1527_01320 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D RTTH1527_01840 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RTTH1527_02460 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RTTH1527_02150 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RTTH1527_00090 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RTTH1527_01070 tail specific periplasmic protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RTTH1527_02480 endopeptidase IV K04773 sppA; protease IV [EC:3.4.21.-]
D RTTH1527_01905 carboxypeptidase IIW K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RTTH1527_01505 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RTTH1527_02635 large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin
D RTTH1527_00550 protease activity modulator protein HflC K04087 hflC; modulator of FtsH protease HflC
D RTTH1527_00545 protease activity modulator protein HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rtt01003]
D RTTH1527_00905 bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RTTH1527_03820 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rtt01005]
D RTTH1527_00030 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RTTH1527_01515 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RTTH1527_01195 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RTTH1527_00040 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RTTH1527_03435 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RTTH1527_03380 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RTTH1527_03375 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RTTH1527_00225 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RTTH1527_00330 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RTTH1527_01800 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RTTH1527_02390 sugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rtt01011]
D RTTH1527_02740 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RTTH1527_01165 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RTTH1527_01160 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RTTH1527_01950 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RTTH1527_02820 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RTTH1527_01170 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RTTH1527_00195 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RTTH1527_01905 carboxypeptidase IIW K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RTTH1527_02810 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RTTH1527_01960 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RTTH1527_02790 MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D RTTH1527_03820 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RTTH1527_00905 bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RTTH1527_02670 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RTTH1527_02680 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RTTH1527_01840 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RTTH1527_01895 soluble lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RTTH1527_01520 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RTTH1527_01845 rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:rtt01004]
D RTTH1527_03465 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RTTH1527_03650 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RTTH1527_03610 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RTTH1527_03600 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RTTH1527_00035 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RTTH1527_01725 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RTTH1527_00450 Acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RTTH1527_02235 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rtt01006]
D RTTH1527_02285 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RTTH1527_02025 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RTTH1527_02415 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RTTH1527_03265 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:rtt01007]
D RTTH1527_01755 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RTTH1527_01540 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_02955 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_02630 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RTTH1527_02230 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RTTH1527_00240 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RTTH1527_00315 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RTTH1527_03250 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RTTH1527_02920 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RTTH1527_03270 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RTTH1527_02005 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RTTH1527_00655 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RTTH1527_01450 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RTTH1527_04025 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RTTH1527_04020 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RTTH1527_03705 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RTTH1527_01815 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RTTH1527_01035 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RTTH1527_04055 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RTTH1527_01985 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RTTH1527_01990 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RTTH1527_00215 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RTTH1527_03980 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RTTH1527_02040 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rtt00194]
D RTTH1527_03785 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RTTH1527_03790 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RTTH1527_03795 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RTTH1527_03800 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RTTH1527_03805 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RTTH1527_00525 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RTTH1527_00530 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RTTH1527_00520 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RTTH1527_00515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RTTH1527_00510 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rtt03000]
D RTTH1527_02525 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RTTH1527_01150 BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RTTH1527_00345 Chromosome partitioning protein ParB (Spo0J protein) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RTTH1527_00500 hypothetical protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RTTH1527_00480 hypothetical protein K07735 algH; putative transcriptional regulator
D RTTH1527_03860 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RTTH1527_02695 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rtt03021]
D RTTH1527_03020 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RTTH1527_00630 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RTTH1527_00635 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RTTH1527_02735 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RTTH1527_04065 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RTTH1527_01430 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D RTTH1527_02615 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RTTH1527_00740 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D RTTH1527_00605 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RTTH1527_03860 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RTTH1527_04080 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RTTH1527_02485 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rtt03019]
D RTTH1527_01205 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RTTH1527_00085 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RTTH1527_02105 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RTTH1527_03180 ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RTTH1527_02385 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RTTH1527_02485 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RTTH1527_00855 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RTTH1527_02970 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RTTH1527_00065 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RTTH1527_01105 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
C 03041 Spliceosome
C 03011 Ribosome [BR:rtt03011]
D RTTH1527_02465 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RTTH1527_00235 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RTTH1527_03110 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RTTH1527_01635 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RTTH1527_03055 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RTTH1527_00445 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RTTH1527_00590 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RTTH1527_03070 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RTTH1527_01100 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RTTH1527_03145 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RTTH1527_03025 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RTTH1527_00585 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RTTH1527_03030 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RTTH1527_03075 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RTTH1527_02380 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RTTH1527_04160 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RTTH1527_03095 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RTTH1527_00440 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RTTH1527_03120 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RTTH1527_03010 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RTTH1527_02910 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RTTH1527_00615 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RTTH1527_03125 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RTTH1527_03140 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RTTH1527_03135 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RTTH1527_03080 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RTTH1527_03065 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RTTH1527_00435 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RTTH1527_00620 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RTTH1527_00610 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RTTH1527_00625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RTTH1527_01095 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RTTH1527_03090 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RTTH1527_03045 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RTTH1527_03105 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RTTH1527_03015 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RTTH1527_03060 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RTTH1527_00110 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RTTH1527_02880 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RTTH1527_03540 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RTTH1527_03115 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RTTH1527_03130 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RTTH1527_03085 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RTTH1527_03545 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RTTH1527_00175 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RTTH1527_03100 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RTTH1527_03050 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RTTH1527_00170 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RTTH1527_03655 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RTTH1527_04165 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RTTH1527_02885 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RTTH1527_02875 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RTTH1527_02175 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RTTH1527_02865 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RTTH1527_r04273 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RTTH1527_r04275 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RTTH1527_r04277 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rtt03009]
D RTTH1527_00085 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RTTH1527_00080 era; GTPase Era K03595 era; GTPase
D RTTH1527_03990 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RTTH1527_03860 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RTTH1527_02615 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RTTH1527_00740 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D RTTH1527_00605 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RTTH1527_03200 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RTTH1527_02580 methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RTTH1527_00770 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RTTH1527_00355 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RTTH1527_02690 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RTTH1527_03520 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RTTH1527_02625 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RTTH1527_03155 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RTTH1527_00745 rRNA (uridine-2'-O-)-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RTTH1527_02575 ribosomal large subunit pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RTTH1527_01210 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RTTH1527_04005 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RTTH1527_01650 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RTTH1527_01205 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RTTH1527_01565 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RTTH1527_03180 ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RTTH1527_03225 GTP-binding protein Der K03977 engA; GTPase
D RTTH1527_04015 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RTTH1527_02075 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RTTH1527_02620 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D RTTH1527_03840 hypothetical protein K09710 ybeB; ribosome-associated protein
D RTTH1527_03490 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor
D RTTH1527_02855 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rtt03016]
D RTTH1527_01540 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_02955 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_01815 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RTTH1527_02920 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RTTH1527_02005 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RTTH1527_03250 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RTTH1527_00315 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RTTH1527_00655 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RTTH1527_04055 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RTTH1527_01035 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RTTH1527_03705 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RTTH1527_00240 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RTTH1527_03270 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RTTH1527_01450 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RTTH1527_01985 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RTTH1527_01990 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RTTH1527_02630 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RTTH1527_02230 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RTTH1527_01495 protein kinase C inhibitor 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RTTH1527_04060 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RTTH1527_02375 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RTTH1527_02310 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_02315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_04015 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RTTH1527_02415 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RTTH1527_03585 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RTTH1527_00360 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RTTH1527_01400 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RTTH1527_02890 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RTTH1527_02985 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RTTH1527_02010 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RTTH1527_02205 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RTTH1527_00340 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D RTTH1527_01755 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RTTH1527_04025 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RTTH1527_04020 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RTTH1527_03935 cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RTTH1527_00045 NifR3-like protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RTTH1527_03825 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RTTH1527_01980 tRNA-methylthiotransferase (MiaB protein) K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RTTH1527_00115 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RTTH1527_01440 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RTTH1527_02300 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D RTTH1527_02215 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D RTTH1527_00990 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RTTH1527_03305 trans-regulatory protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RTTH1527_00820 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RTTH1527_02870 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RTTH1527_00280 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RTTH1527_04030 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D RTTH1527_03395 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RTTH1527_00430 cell cycle ATPase MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RTTH1527_02600 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RTTH1527_00455 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RTTH1527_00055 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RTTH1527_02385 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rtt03012]
D RTTH1527_02610 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RTTH1527_02510 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RTTH1527_00230 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D RTTH1527_03150 elongation factor Tu K02358 tuf; elongation factor Tu
D RTTH1527_00595 elongation factor G K02355 fusA; elongation factor G
D RTTH1527_02500 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RTTH1527_00700 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D RTTH1527_04010 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RTTH1527_02860 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RTTH1527_03850 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RTTH1527_01115 elongation factor P K02356 efp; elongation factor P
D RTTH1527_01290 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rtt03110]
D RTTH1527_00460 ATP-binding ClpB chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RTTH1527_03295 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RTTH1527_01510 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RTTH1527_03975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D RTTH1527_00855 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RTTH1527_00935 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D RTTH1527_02970 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RTTH1527_00850 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RTTH1527_00940 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D RTTH1527_02990 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RTTH1527_02975 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D RTTH1527_00555 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RTTH1527_00425 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RTTH1527_00515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RTTH1527_00290 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D RTTH1527_02710 copper(I)-binding protein K09796 pccA; periplasmic copper chaperone A
D RTTH1527_00010 thioredoxin K03671 TXN; thioredoxin
D RTTH1527_00955 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D RTTH1527_03510 glutaredoxin 3 K07390 grxD; monothiol glutaredoxin
C 04131 Membrane trafficking [BR:rtt04131]
D RTTH1527_00365 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RTTH1527_03975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rtt03051]
D RTTH1527_03975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rtt03032]
D RTTH1527_03425 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RTTH1527_00785 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RTTH1527_03370 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RTTH1527_02475 integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RTTH1527_02840 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RTTH1527_02570 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RTTH1527_04070 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RTTH1527_03960 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RTTH1527_03680 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RTTH1527_01995 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RTTH1527_04140 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RTTH1527_00870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RTTH1527_00790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RTTH1527_03445 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RTTH1527_04100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RTTH1527_00945 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RTTH1527_03390 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RTTH1527_00965 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RTTH1527_02745 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RTTH1527_00305 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RTTH1527_01065 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RTTH1527_01545 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rtt03036]
D RTTH1527_00085 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RTTH1527_00785 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RTTH1527_03370 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RTTH1527_02475 integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RTTH1527_02840 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RTTH1527_03815 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein
D RTTH1527_01180 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RTTH1527_02680 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RTTH1527_03895 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RTTH1527_02685 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RTTH1527_01175 cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ
D RTTH1527_01955 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RTTH1527_03165 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RTTH1527_00985 ATPase K06916 zapE; cell division protein ZapE
D RTTH1527_03635 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RTTH1527_03630 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RTTH1527_01315 rod shape-determining protein rodA K05837 rodA; rod shape determining protein RodA
D RTTH1527_00350 Chromosome partitioning protein ParA (Soj protein) K03496 parA; chromosome partitioning protein
D RTTH1527_00645 hypothetical protein K03496 parA; chromosome partitioning protein
D RTTH1527_00345 Chromosome partitioning protein ParB (Spo0J protein) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RTTH1527_00305 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RTTH1527_01065 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RTTH1527_00360 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RTTH1527_00355 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RTTH1527_03865 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RTTH1527_01710 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RTTH1527_00540 ATP-binding protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RTTH1527_00165 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rtt03400]
D RTTH1527_01665 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RTTH1527_03515 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RTTH1527_01890 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RTTH1527_04000 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RTTH1527_01220 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RTTH1527_03220 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RTTH1527_02495 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RTTH1527_03390 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RTTH1527_03955 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RTTH1527_00950 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RTTH1527_02705 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RTTH1527_02135 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RTTH1527_00630 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RTTH1527_00635 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RTTH1527_03020 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RTTH1527_02735 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RTTH1527_02825 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RTTH1527_01405 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RTTH1527_04170 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D RTTH1527_03215 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RTTH1527_01660 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RTTH1527_03680 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RTTH1527_01995 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RTTH1527_04140 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RTTH1527_00870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RTTH1527_00790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RTTH1527_03445 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RTTH1527_04100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RTTH1527_03960 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RTTH1527_03595 recA; recombinase A K03553 recA; recombination protein RecA
D RTTH1527_01825 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RTTH1527_01830 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RTTH1527_00075 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RTTH1527_02560 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RTTH1527_02585 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RTTH1527_00490 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D RTTH1527_02805 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RTTH1527_02595 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RTTH1527_02090 recR; recombination protein RecR K06187 recR; recombination protein RecR
D RTTH1527_00840 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RTTH1527_03460 ATP-dependent helicase/nuclease K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RTTH1527_01910 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RTTH1527_00965 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RTTH1527_02745 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RTTH1527_01545 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RTTH1527_00785 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RTTH1527_03370 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RTTH1527_02475 integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RTTH1527_02435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RTTH1527_02430 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rtt03029]
D RTTH1527_01275 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RTTH1527_02610 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RTTH1527_02510 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RTTH1527_00230 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D RTTH1527_03150 elongation factor Tu K02358 tuf; elongation factor Tu
D RTTH1527_00595 elongation factor G K02355 fusA; elongation factor G
D RTTH1527_00080 era; GTPase Era K03595 era; GTPase
D RTTH1527_02630 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RTTH1527_02005 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RTTH1527_00655 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RTTH1527_00315 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RTTH1527_00690 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RTTH1527_00685 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RTTH1527_00695 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RTTH1527_03960 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RTTH1527_00730 outer membrane protein omp1 K07277 SAM50; outer membrane protein insertion porin family
D RTTH1527_00855 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RTTH1527_02990 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RTTH1527_02970 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RTTH1527_02975 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D RTTH1527_00850 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RTTH1527_02310 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_02315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_00940 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D RTTH1527_03510 glutaredoxin 3 K07390 grxD; monothiol glutaredoxin
D RTTH1527_00540 ATP-binding protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RTTH1527_00400 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RTTH1527_02770 Sco2 protein precursor K07152 SCO1; protein SCO1
D RTTH1527_03975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rtt02000]
D RTTH1527_01835 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RTTH1527_00960 ABC transporter ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RTTH1527_03310 lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RTTH1527_00995 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RTTH1527_01485 alkaline proteinase secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RTTH1527_03415 ABC transporter substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RTTH1527_00190 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RTTH1527_00185 ribonucleotide ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RTTH1527_00200 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RTTH1527_01735 ABC-type transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RTTH1527_01740 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RTTH1527_01745 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RTTH1527_00680 glutamine-binding periplasmic protein GlnH K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RTTH1527_00580 glutamine transport system permease protein GlnP K02029 ABC.PA.P; polar amino acid transport system permease protein
D RTTH1527_04120 glutamine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RTTH1527_00060 zinc/manganese ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein
D RTTH1527_02945 zinc/manganese ABC transporter permease protein K09816 znuB; zinc transport system permease protein
D RTTH1527_03950 metal transport ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RTTH1527_01535 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D RTTH1527_00020 O-antigen export system permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D RTTH1527_00015 O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RTTH1527_04135 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D RTTH1527_03640 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D RTTH1527_02405 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RTTH1527_03325 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D RTTH1527_03330 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RTTH1527_03930 heme exporter protein C K02195 ccmC; heme exporter protein C
D RTTH1527_01260 heme exporter protein B K02194 ccmB; heme exporter protein B
D RTTH1527_03755 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RTTH1527_04035 proline/betaine transporter ProP6 K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D RTTH1527_04180 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D RTTH1527_00370 glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D RTTH1527_02265 murein peptide permease protein AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RTTH1527_03320 bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RTTH1527_02850 bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RTTH1527_00715 multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RTTH1527_02325 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RTTH1527_00405 hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel
D RTTH1527_02755 magnesium transporter K06213 mgtE; magnesium transporter
D RTTH1527_01455 TolQ protein K03562 tolQ; biopolymer transport protein TolQ
D RTTH1527_01460 TolR protein K03560 tolR; biopolymer transport protein TolR
D RTTH1527_03340 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RTTH1527_01050 outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D RTTH1527_00730 outer membrane protein omp1 K07277 SAM50; outer membrane protein insertion porin family
D RTTH1527_00845 lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D RTTH1527_02400 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D RTTH1527_02395 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D RTTH1527_03210 organic solvent tolerance protein OstA K04744 lptD; LPS-assembly protein
D RTTH1527_03485 hemolysin C K06189 corC; hemolysin (HlyC) family protein
D RTTH1527_03940 p34 protein/cation transporter K13283 fieF; ferrous-iron efflux pump FieF
D RTTH1527_00260 hypothetical protein K15270 sam; S-adenosylmethionine uptake transporter
D RTTH1527_03835 glutathione-regulated potassium-efflux system K03455 KEA1_2_3; K+:H+ antiporter
D RTTH1527_01255 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D RTTH1527_01340 putative monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RTTH1527_01325 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RTTH1527_01330 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RTTH1527_01335 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RTTH1527_00710 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RTTH1527_01250 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RTTH1527_02790 MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D RTTH1527_01760 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D RTTH1527_02115 hypothetical protein K24180 mleP; malate permease and related proteins
D RTTH1527_01955 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RTTH1527_01860 hypothetical protein K07243 FTR; high-affinity iron transporter
D RTTH1527_03645 peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein
D RTTH1527_01425 tolB; translocation protein TolB K03641 tolB; TolB protein
D RTTH1527_01140 multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D RTTH1527_01480 alkaline proteinase secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D RTTH1527_03345 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:rtt02044]
D RTTH1527_01050 outer membrane protein tolC precursor K12340 tolC; outer membrane protein
D RTTH1527_01485 alkaline proteinase secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RTTH1527_01480 alkaline proteinase secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D RTTH1527_00160 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3
D RTTH1527_03710 VirB4 protein precursor K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D RTTH1527_00155 type IV secretion system ATPase VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D RTTH1527_00130 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_00135 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_00140 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_00145 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_00150 VirB6-like protein of the type IV secretion system K03201 virB6; type IV secretion system protein VirB6
D RTTH1527_01350 VirB8-like protein of type IV secretion system K03203 virB8; type IV secretion system protein VirB8
D RTTH1527_01360 VirB8-like protein of the Type IV secretion system K03203 virB8; type IV secretion system protein VirB8
D RTTH1527_01345 VirB9-like conjugal transfer protein precursor K03204 virB9; type IV secretion system protein VirB9
D RTTH1527_01365 VirB9 protein precursor of the type IV secretion system K03204 virB9; type IV secretion system protein VirB9
D RTTH1527_01370 VirB10 protein of the type IV secretion system K03195 virB10; type IV secretion system protein VirB10
D RTTH1527_01375 type IV secretion system ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D RTTH1527_01380 type IV secretion system component VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RTTH1527_02720 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RTTH1527_00290 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D RTTH1527_02765 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RTTH1527_00600 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RTTH1527_00100 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RTTH1527_00250 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RTTH1527_03040 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RTTH1527_00795 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RTTH1527_03665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RTTH1527_02760 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RTTH1527_00400 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RTTH1527_03530 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D RTTH1527_03700 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rtt02042]
D RTTH1527_03340 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rtt02022]
D RTTH1527_02030 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RTTH1527_02035 response regulator protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RTTH1527_02905 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RTTH1527_02655 nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RTTH1527_01075 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D RTTH1527_01110 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RTTH1527_00285 transcriptional activator protein CzcR K13584 ctrA; two-component system, cell cycle response regulator CtrA
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rtt04812]
D RTTH1527_03635 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RTTH1527_03165 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RTTH1527_01180 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RTTH1527_00350 Chromosome partitioning protein ParA (Soj protein) K03496 parA; chromosome partitioning protein
D RTTH1527_00645 hypothetical protein K03496 parA; chromosome partitioning protein
D RTTH1527_00345 Chromosome partitioning protein ParB (Spo0J protein) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rtt04147]
D RTTH1527_03975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D RTTH1527_01550 thioredoxin peroxidase 1 K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RTTH1527_02970 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RTTH1527_00855 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RTTH1527_03150 elongation factor Tu K02358 tuf; elongation factor Tu
D RTTH1527_01495 protein kinase C inhibitor 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RTTH1527_03470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RTTH1527_03035 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RTTH1527_02350 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RTTH1527_02555 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RTTH1527_03810 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RTTH1527_02195 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 02048 Prokaryotic defense system [BR:rtt02048]
D RTTH1527_03165 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RTTH1527_03635 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RTTH1527_00305 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RTTH1527_01065 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RTTH1527_01540 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_02955 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RTTH1527_02830 hypothetical protein K09159 cptB; antitoxin CptB
D RTTH1527_02310 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RTTH1527_02315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rtt01504]
D RTTH1527_01050 outer membrane protein tolC precursor K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rtt03100]
D RTTH1527_t04245 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RTTH1527_t04239 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RTTH1527_t04233 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RTTH1527_t04243 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RTTH1527_t04267 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RTTH1527_t04221 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RTTH1527_t04237 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RTTH1527_t04223 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RTTH1527_t04235 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RTTH1527_t04209 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RTTH1527_t04249 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RTTH1527_t04253 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RTTH1527_t04259 tRNA-His K14226 tRNA-His; tRNA His
D RTTH1527_t04227 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RTTH1527_t04247 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RTTH1527_t04269 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RTTH1527_t04257 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RTTH1527_t04225 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RTTH1527_t04263 tRNA-Met K14230 tRNA-Met; tRNA Met
D RTTH1527_t04211 tRNA-Met K14230 tRNA-Met; tRNA Met
D RTTH1527_t04219 tRNA-Met K14230 tRNA-Met; tRNA Met
D RTTH1527_t04207 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RTTH1527_t04265 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RTTH1527_t04261 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RTTH1527_t04229 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RTTH1527_t04231 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RTTH1527_t04217 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RTTH1527_t04271 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RTTH1527_t04213 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RTTH1527_t04215 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RTTH1527_t04255 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RTTH1527_t04241 tRNA-Val K14237 tRNA-Val; tRNA Val
D RTTH1527_t04251 tRNA-Val K14237 tRNA-Val; tRNA Val
D RTTH1527_r04275 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RTTH1527_r04277 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RTTH1527_r04273 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RTTH1527_01730 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RTTH1527_00410 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RTTH1527_00005 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RTTH1527_03245 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RTTH1527_00970 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RTTH1527_02145 threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RTTH1527_00930 (2Fe-2S) ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D RTTH1527_03925 ferredoxin K05524 fdxA; ferredoxin
D RTTH1527_02305 scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D RTTH1527_03230 ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D RTTH1527_02915 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D RTTH1527_00760 oligoketide cyclase/lipid transport protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D RTTH1527_03505 serine esterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RTTH1527_03185 cold shock-like protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D RTTH1527_03985 tig; trigger factor K03545 tig; trigger factor
D RTTH1527_02050 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D RTTH1527_03285 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
C 99979 Viral proteins
C 99998 Others
D RTTH1527_04110 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RTTH1527_01445 cationic amino acid transporter-1 K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RTTH1527_02295 putrescine-ornithine antiporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RTTH1527_00780 acriflavin resistance protein D K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RTTH1527_00375 ADP/ATP carrier protein 1 K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RTTH1527_02370 ADP/ATP carrier protein 4 K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RTTH1527_03480 ADP/ATP carrier protein 5 K03301 TC.AAA; ATP:ADP antiporter, AAA family
C 99978 Cell growth
D RTTH1527_01855 intracellular septation protein A K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D RTTH1527_01235 GTP-binding protein K06207 typA; GTP-binding protein
C 99992 Structural proteins
D RTTH1527_00205 VacJ lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RTTH1527_00265 OmpW family outer-membrane protein K07275 ompW; outer membrane protein
D RTTH1527_02780 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
C 99994 Others
D RTTH1527_03720 tellurium resistance protein TerC K05794 terC; tellurite resistance protein TerC
D RTTH1527_00815 periplasmic divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D RTTH1527_01525 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RTTH1527_02530 hypothetical protein K07001 K07001; NTE family protein
D RTTH1527_00325 iron-binding protein IscA/HesB K15724 erpA; iron-sulfur cluster insertion protein
D RTTH1527_02355 hypothetical protein K07058 K07058; membrane protein
D RTTH1527_00560 hypothetical protein K07146 K07146; UPF0176 protein
C 99997 Function unknown
D RTTH1527_01060 hypothetical protein K06867 K06867; uncharacterized protein
D RTTH1527_01625 hydrolase K06889 K06889; uncharacterized protein
D RTTH1527_00665 hypothetical protein K06890 K06890; uncharacterized protein
D RTTH1527_02245 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D RTTH1527_00920 hypothetical protein K07080 K07080; uncharacterized protein
D RTTH1527_01670 hypothetical protein K08998 K08998; uncharacterized protein
D RTTH1527_03970 hypothetical protein K09131 K09131; uncharacterized protein
D RTTH1527_00775 hypothetical protein K09779 K09779; uncharacterized protein
D RTTH1527_03430 hypothetical protein K09985 K09985; uncharacterized protein
D RTTH1527_00275 putative cytoplasmic protein K09987 K09987; uncharacterized protein
D RTTH1527_01055 hypothetical protein K09991 K09991; uncharacterized protein
D RTTH1527_00535 putative nucleoside-diphosphate-sugar epimerase K07276 K07276; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 6, 2024