+D GENES KO
#
KEGG Orthology (KO) - Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:seb00010]
D STM474_2504 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D STM474_4415 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D STM474_2892 putative cytoplasmic protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D STM474_4244 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D STM474_1331 pfkB; 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D STM474_4612 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D STM474_4267 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D STM474_2228 fbaB; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D STM474_3215 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D STM474_4263 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D STM474_1294 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D STM474_3216 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D STM474_0797 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D STM474_4791 gpmB; phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D STM474_3877 pmgI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D STM474_3096 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D STM474_1382 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D STM474_1920 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D STM474_1354 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D STM474_0160 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D STM474_0161 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_1663 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D STM474_1639 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D STM474_1766 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D STM474_1580 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D STM474_4224 putative alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D STM474_4684 yjgB; putative alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D STM474_2564 eutG; putative transport protein K04022 eutG; alcohol dehydrogenase
D STM474_3852 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D STM474_4471 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D STM474_0798 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D STM474_4197 yihR; putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D STM474_1110 agp; glucose-1-phosphatase/inositol phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D STM474_4203 yihX; phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D STM474_0719 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D STM474_1293 yeaD; aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D STM474_3667 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D STM474_1321 celF; phospho-beta-glucosidase/cellobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D STM474_3949 putative glycosyl hydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D STM474_3198 bglA; 6-phospho-beta-glucosidase A K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D STM474_2536 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D STM474_1200 ptgcb; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D STM474_2893 putative phosphotransferase system IIC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:seb00020]
D STM474_0753 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D STM474_1727 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D STM474_0167 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D STM474_1236 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D STM474_0759 sucA; alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D STM474_0760 sucB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_0762 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D STM474_0761 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D STM474_0757 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D STM474_0758 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D STM474_0755 sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D STM474_0756 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D STM474_4540 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D STM474_4539 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D STM474_4538 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D STM474_4537 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D STM474_1475 fumA; fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D STM474_4496 fumB; fumarase B K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D STM474_0787 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D STM474_0786 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D STM474_1476 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D STM474_1393 ydhz; Uncharacterized protein ydhZ K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D STM474_3519 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D STM474_3667 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D STM474_0160 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D STM474_0161 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D STM474_1663 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:seb00030]
D STM474_4415 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D STM474_2892 putative cytoplasmic protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D STM474_1918 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D STM474_0810 ybhE; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D STM474_2166 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D STM474_3650 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D STM474_4262 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D STM474_2577 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D STM474_3223 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D STM474_2437 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D STM474_2438 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D STM474_0007 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D STM474_2576 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2]
D STM474_3210 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D STM474_2890 putative hexulose 6 phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D STM474_2891 hxlB; 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D STM474_4772 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D STM474_3967 putative carbohydrate kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D STM474_4064 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D STM474_4774 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D STM474_0719 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D STM474_1799 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D STM474_1917 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D STM474_1916 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D STM474_3941 putative cytoplasmic protein K17463 dgaF; 2-dehydro-3-deoxy-phosphogluconate aldolase [EC:4.1.2.14]
D STM474_0178 gcd; glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D STM474_3818 yiaE; 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D STM474_4683 idnK; D-gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D STM474_3708 gluconate kinase 1 K00851 idnK; gluconokinase [EC:2.7.1.12]
D STM474_3781 kdgK; ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D STM474_3946 PTS system fructose IIA component K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203]
D STM474_3945 putative PTS system protein K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D STM474_3944 putative PTS system protein K17466 dgaC; D-glucosaminate PTS system EIIC component
D STM474_3943 putative PTS system protein K17467 dgaD; D-glucosaminate PTS system EIID component
D STM474_3942 putative selenocysteine synthase K17468 dgaE; D-glucosaminate-6-phosphate ammonia-lyase [EC:4.3.1.29]
D STM474_2228 fbaB; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D STM474_3215 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D STM474_4612 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D STM474_4267 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D STM474_4244 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D STM474_1331 pfkB; 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:seb00040]
D STM474_0811 ybhC; putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D STM474_3165 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D STM474_3164 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D STM474_3287 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D STM474_0670 Putative hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D STM474_0671 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D STM474_3285 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D STM474_1515 rspA; putative dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D STM474_3286 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D STM474_1519 ydfI; putative mannitol dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D STM474_1516 rspB; putative dehydrogenase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D STM474_2165 udg; UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D STM474_1769 galU; UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_2183 galF; UTP--glucose-1-phosphate uridylyltransferase subunit GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_3840 yiaK; 2,3-diketo-L-gulonate reductase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D STM474_3846 lyxK; L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D STM474_4583 ulad; 3-keto-L-gulonate-6-phosphate decarboxylase ulaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D STM474_3847 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D STM474_4584 sgaU; L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D STM474_3848 sgbU; putative L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D STM474_4585 sgaE; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D STM474_0104 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D STM474_3849 sgbE; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D STM474_3650 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D STM474_4262 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D STM474_0105 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D STM474_0106 araB; ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D STM474_3832 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D STM474_3833 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D STM474_4227 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D STM474_4225 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D STM474_3699 putative dihydrodipicolinate synthetase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
D STM474_3122 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D STM474_3123 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D STM474_3119 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:seb00051]
D STM474_0410 yajF; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D STM474_1474 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D STM474_2168 rfbK; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D STM474_2189 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D STM474_2190 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D STM474_2169 rfbM; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D STM474_2194 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D STM474_2193 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D STM474_3122 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D STM474_3123 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D STM474_3119 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D STM474_2387 yfaW; putative galactonate dehydratase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D STM474_2385 putative aldolase K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53]
D STM474_4226 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D STM474_4227 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D STM474_4225 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D STM474_2017 yedP; mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D STM474_4244 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D STM474_1331 pfkB; 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D STM474_4612 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D STM474_4267 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D STM474_3858 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D STM474_2973 srlD; sorbitol-6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D STM474_2296 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D STM474_3833 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D STM474_2228 fbaB; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D STM474_3215 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D STM474_4263 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D STM474_2295 fruA; fructose-specific PTS system IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_3412 putative phosphotransferase system fructose-specific component IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_4037 putative phosphotransferase system fructose-specific component IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_0597 putative PTS system mannose-specific enzyme IIAB K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D STM474_1852 manX; mannose-specific enzyme IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D STM474_1853 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D STM474_1854 manZ; mannose-specific PTS system protein IID K02796 manZ; mannose PTS system EIID component
D STM474_3857 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D STM474_2431 yfbT; putative phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D STM474_1327 yniC; 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D STM474_2972 slrB; glucitol/sorbitol-specific PTS system component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D STM474_2886 putative glucitol-specific PTS enzyme III K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D STM474_2887 putative glucitol-specific PTS enzyme III K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D STM474_2971 srlE; glucitol/sorbitol-specific enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D STM474_2885 putative PTS system glucitol/sorbitol-specific enzyme II K02783 srlA; glucitol/sorbitol PTS system EIIC component
D STM474_2970 srlA; PTS system, glucitol/sorbitol-specific IIBC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:seb00052]
D STM474_0798 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D STM474_4197 yihR; putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D STM474_0799 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D STM474_0800 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D STM474_0801 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D STM474_1769 galU; UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_2183 galF; UTP--glucose-1-phosphate uridylyltransferase subunit GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_0719 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D STM474_2504 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D STM474_4494 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D STM474_3958 beta-lactamase K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_3415 galactitol-specific PTS system component IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_1628 putative phosphotransferase enzyme K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_3957 putative PTS system IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_3416 galactitol-specific PTS system component IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_1625 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_3417 PTS family galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component
D STM474_3956 putative PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D STM474_1626 putative PTS system enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D STM474_3418 galactitol-1-phosphate dehydrogenase K00094 E1.1.1.251; galactitol-1-phosphate 5-dehydrogenase [EC:1.1.1.251]
D STM474_3408 putative sugar kinase K21621 fk; tagatose kinase [EC:2.7.1.101]
D STM474_4244 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D STM474_1331 pfkB; 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D STM474_3410 gatY; tagatose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D STM474_3414 putative tagatose 6-phosphate kinase 1 K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D STM474_4005 dgoA; 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D STM474_2369 putative dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D STM474_4007 dgoK; 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D STM474_4006 dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D STM474_0420 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:seb00053]
D STM474_2165 udg; UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D STM474_4582 ptxA; L-ascorbate-specific enzyme IIA component of PTS K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D STM474_2441 putative sugar phosphotransferase component II A K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D STM474_0909 putative inner membrane protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_4581 sgaB; L-ascorbate-specific enzyme IIB component of PTS K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_2440 putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_0908 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_4580 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_2439 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_4579 ulag; putative L-ascorbate-6-phosphate lactonase ulaG K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D STM474_4583 ulad; 3-keto-L-gulonate-6-phosphate decarboxylase ulaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D STM474_3847 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D STM474_4584 sgaU; L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D STM474_3848 sgbU; putative L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D STM474_4585 sgaE; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D STM474_0104 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D STM474_3849 sgbE; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D STM474_3840 yiaK; 2,3-diketo-L-gulonate reductase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D STM474_3846 lyxK; L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D STM474_3105 gudD; d-glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D STM474_3406 garL; alpha-dehydro-beta-deoxy-D-glucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D STM474_3407 garD; galactarate dehydrogenase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D STM474_3870 putative mandelate racemase K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:seb00500]
D STM474_2675 putative phosphotransferase system IIB component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D STM474_0420 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D STM474_1769 galU; UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_2183 galF; UTP--glucose-1-phosphate uridylyltransferase subunit GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_2255 bglX; periplasmic beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D STM474_3788 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D STM474_1319 celC; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D STM474_1317 celA; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D STM474_1318 celB; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D STM474_1321 celF; phospho-beta-glucosidase/cellobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D STM474_3949 putative glycosyl hydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D STM474_3198 bglA; 6-phospho-beta-glucosidase A K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D STM474_2177 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D STM474_3703 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D STM474_3702 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D STM474_3705 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D STM474_3682 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D STM474_3701 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D STM474_3704 glgX; glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D STM474_3836 malS; periplasmic alpha-amylase precursor K01176 AMY; alpha-amylase [EC:3.2.1.1]
D STM474_1995 amyA; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D STM474_3681 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D STM474_2536 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D STM474_1570 putative glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68]
D STM474_1571 putative glycosyl hydrolase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D STM474_1572 3-oxoacyl-(acyl carrier protein) synthase III K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D STM474_1960 otsA; trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D STM474_1961 otsB; trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D STM474_1817 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D STM474_3771 treF; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D STM474_4650 treC; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D STM474_0719 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D STM474_2504 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D STM474_4415 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D STM474_2892 putative cytoplasmic protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D STM474_0410 yajF; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:seb00520]
D STM474_1206 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D STM474_2536 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D STM474_0706 nagE; N-acetyl glucosamine specific PTS system components IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D STM474_1217 ycfX; N-acetyl-D-glucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D STM474_0704 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D STM474_0705 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D STM474_0410 yajF; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D STM474_4040 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D STM474_3452 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D STM474_4041 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D STM474_2676 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D STM474_1453 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D STM474_3467 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D STM474_4321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D STM474_3496 nanK; N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D STM474_3497 nanE; N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D STM474_1123 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D STM474_3499 nanA; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D STM474_4098 wecB; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D STM474_4099 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D STM474_2395 yfbG; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D STM474_2393 yfbE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D STM474_2394 pmrF; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D STM474_2396 putative cytoplasmic protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D STM474_1200 ptgcb; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D STM474_2893 putative phosphotransferase system IIC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D STM474_2504 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D STM474_0719 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D STM474_1769 galU; UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_2183 galF; UTP--glucose-1-phosphate uridylyltransferase subunit GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_2165 udg; UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D STM474_0799 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D STM474_0800 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D STM474_0801 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D STM474_0597 putative PTS system mannose-specific enzyme IIAB K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D STM474_1852 manX; mannose-specific enzyme IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D STM474_1853 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D STM474_1854 manZ; mannose-specific PTS system protein IID K02796 manZ; mannose PTS system EIID component
D STM474_4415 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D STM474_2892 putative cytoplasmic protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D STM474_1474 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D STM474_2168 rfbK; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D STM474_2189 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D STM474_2190 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D STM474_2169 rfbM; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D STM474_2194 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D STM474_2193 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D STM474_2177 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D STM474_2176 rfbG; CDP glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D STM474_2175 rfbH; CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D STM474_2178 rfbI; CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D STM474_2174 rfbJ; CDP-abequose synthase K12455 rfbJ; CDP-abequose synthase [EC:1.1.1.341]
D STM474_3703 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:seb00620]
D STM474_4471 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D STM474_1663 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D STM474_0160 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D STM474_0161 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_3395 tdcE; pyruvate formate-lyase 4/2-ketobutyrate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D STM474_0959 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D STM474_1766 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D STM474_2566 eutE; putative aldehyde oxidoreductase K04021 eutE; aldehyde dehydrogenase
D STM474_1580 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D STM474_4224 putative alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D STM474_1639 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D STM474_4684 yjgB; putative alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D STM474_2564 eutG; putative transport protein K04022 eutG; alcohol dehydrogenase
D STM474_2434 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D STM474_2435 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D STM474_2569 eutD; phosphotransacetylase K04020 eutD; phosphotransacetylase
D STM474_1382 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D STM474_1920 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D STM474_0241 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D STM474_3541 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D STM474_3542 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D STM474_2465 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D STM474_1075 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D STM474_3852 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D STM474_3866 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D STM474_0922 poxB; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D STM474_1659 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D STM474_2256 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D STM474_1442 gloA; glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D STM474_0272 putative periplasmic fimbrial chaperone K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D STM474_0983 ycbL; putative metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D STM474_1130 ycdW; putative oxidoreductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D STM474_3818 yiaE; 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D STM474_1579 sfcA; malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D STM474_2575 maeB; malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D STM474_0058 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D STM474_3512 oadA; oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D STM474_0792 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D STM474_0057 putative oxalacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_0793 putative oxalacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_3511 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_0059 oag3; oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D STM474_3513 oadG; oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D STM474_0791 dcoC; oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D STM474_3519 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D STM474_1475 fumA; fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D STM474_4496 fumB; fumarase B K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D STM474_0787 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D STM474_0786 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D STM474_1476 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D STM474_1393 ydhz; Uncharacterized protein ydhZ K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D STM474_4540 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D STM474_4539 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D STM474_4538 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D STM474_4537 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D STM474_4303 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D STM474_3667 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D STM474_1354 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D STM474_4372 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_0119 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:seb00630]
D STM474_4373 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D STM474_4471 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D STM474_4372 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D STM474_3519 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D STM474_0753 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D STM474_1727 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D STM474_0167 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_1323 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6]
D STM474_1130 ycdW; putative oxidoreductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D STM474_3818 yiaE; 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D STM474_3649 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D STM474_4185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D STM474_2659 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D STM474_3200 gcvP; glycine cleavage complex protein P, glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D STM474_3202 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_3201 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D STM474_0538 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D STM474_0539 gip; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D STM474_0540 glxR; tartronic semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D STM474_3405 garR; tartronate semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D STM474_0546 glxK; glycerate kinase II K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_3104 putative glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_3404 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_3118 fucO; L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D STM474_3515 tartrate dehydratase subunit alpha K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D STM474_3514 L(+)-tartrate dehydratase subunit beta K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D STM474_1916 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D STM474_4216 fdoG; formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D STM474_4215 fdoH; formate dehydrogenase-O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D STM474_4214 fdoI; formate dehydrogenase-O subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D STM474_1773 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:seb00640]
D STM474_4471 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D STM474_0386 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D STM474_2434 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D STM474_3396 tdcD; propionate/acetate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15]
D STM474_2142 pduW; propionate kinase K19697 pduW; propionate kinase [EC:2.7.2.15]
D STM474_2435 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D STM474_2132 pduL; propanediol utilization protein K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_3395 tdcE; pyruvate formate-lyase 4/2-ketobutyrate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D STM474_0959 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D STM474_3538 yhdH; oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_0241 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D STM474_3541 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D STM474_3542 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D STM474_2465 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D STM474_2927 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D STM474_0761 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D STM474_0762 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D STM474_4619 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D STM474_0384 prpC; methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D STM474_0385 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D STM474_0167 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D STM474_0383 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D STM474_1068 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D STM474_3315 yqhD; putative alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D STM474_3696 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D STM474_4293 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D STM474_3118 fucO; L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D STM474_2125 pduC; propanediol utilization dehydratase, large subunit K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D STM474_2126 pduD; propanediol dehydratase medium subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D STM474_2127 pduE; propanediol dehydratase small subunit K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D STM474_2137 pduQ; propanol dehydrogenase K13921 pduQ; 1-propanol dehydrogenase
D STM474_2136 pduP; CoA-dependent propionaldehyde dehydrogenase K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:seb00650]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_1362 ydiF; coenzyme A transferase domain protein K19709 ydiF; acetate CoA-transferase [EC:2.8.3.8]
D STM474_1766 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D STM474_0057 putative oxalacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_0793 putative oxalacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_3511 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_0757 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D STM474_0758 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D STM474_0755 sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D STM474_0756 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D STM474_4540 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D STM474_4539 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D STM474_4538 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D STM474_4537 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D STM474_2927 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D STM474_4723 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_2926 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_1535 yneI; putative succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D STM474_4200 yihU; 3-hydroxyisobutyrate dehydrogenase family protein K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373]
D STM474_3395 tdcE; pyruvate formate-lyase 4/2-ketobutyrate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D STM474_0959 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D STM474_1663 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D STM474_0122 ilvI; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_3970 ilvB; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_4079 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_0123 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D STM474_3969 ilvN; acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D STM474_4080 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:seb00660]
D STM474_0122 ilvI; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_3970 ilvB; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_4079 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_0123 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D STM474_3969 ilvN; acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D STM474_4080 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D STM474_3267 putative acetyl-CoA hydrolase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D STM474_0761 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D STM474_0762 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D STM474_3268 putative monoamine oxidase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D STM474_3269 cilB; LysR family transcriptional regulator K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D STM474_0117 leuC; isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D STM474_0116 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D STM474_0345 putative 3-isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D STM474_0118 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:seb00562]
D STM474_2650 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D STM474_4622 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D STM474_4629 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D STM474_4624 putative endonuclease K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D STM474_4631 putative cytoplasmic protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D STM474_4621 iolE; 2-keto-myo-inositol dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D STM474_4628 putative malonic semialdehyde oxidative decarboxylase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D STM474_4618 putative inner membrane protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D STM474_4626 putative carbohydrate kinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D STM474_4619 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D STM474_4263 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:seb00190]
D STM474_2425 nuoA; NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D STM474_2424 nuoB; NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D STM474_2423 nuoC; bifunctional NADH:ubiquinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D STM474_2422 nuoE; NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D STM474_2421 nuoF; NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D STM474_2420 nuoG; NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D STM474_2419 nuoH; NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D STM474_2418 nuoI; NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D STM474_2417 nuoJ; NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D STM474_2416 nuoK; NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D STM474_2415 nuoL; NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D STM474_2414 nuoM; NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D STM474_2413 nuoN; NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D STM474_1208 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D STM474_0757 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D STM474_0758 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D STM474_0755 sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D STM474_0756 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D STM474_4540 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D STM474_4539 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D STM474_4538 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D STM474_4537 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D STM474_0459 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D STM474_0460 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D STM474_0461 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D STM474_0462 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D STM474_0463 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D STM474_1812 cytochrome D ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D STM474_0374 cytochrome BD2 subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D STM474_0765 cydA; cytochrome d terminal oxidase polypeptide subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D STM474_1813 putative cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D STM474_0375 hypothetical protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D STM474_0766 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D STM474_0767 ybgT; Cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D STM474_1814 putative periplasmic protein K22501 appX; cytochrome bd-II ubiquinol oxidase subunit AppX [EC:7.1.1.7]
D STM474_4046 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D STM474_4044 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D STM474_4045 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D STM474_4047 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D STM474_4043 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D STM474_4050 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D STM474_4048 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D STM474_4049 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D STM474_4611 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D STM474_2604 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:seb00680]
D STM474_1639 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D STM474_2283 yeiG; putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D STM474_4216 fdoG; formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D STM474_4215 fdoH; formate dehydrogenase-O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D STM474_4214 fdoI; formate dehydrogenase-O subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D STM474_4481 fdhF; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D STM474_2659 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D STM474_3096 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D STM474_4303 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D STM474_3519 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D STM474_2228 fbaB; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D STM474_3215 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D STM474_4612 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D STM474_4267 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D STM474_4244 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D STM474_1331 pfkB; 6-phosphofructokinase 2 K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D STM474_2891 hxlB; 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D STM474_2890 putative hexulose 6 phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D STM474_3999 torA; trimethylamine N-oxide reductase subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D STM474_4000 torC; trimethylamine N-oxide reductase cytochrome c-like subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D STM474_3998 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D STM474_2434 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D STM474_2435 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D STM474_4471 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D STM474_1354 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D STM474_0797 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D STM474_4791 gpmB; phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D STM474_3877 pmgI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D STM474_3209 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D STM474_0963 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D STM474_4784 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:seb00910]
D STM474_1782 narK; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D STM474_1589 narU; nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D STM474_1590 narZ; nitrate reductase 2 alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1781 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1591 narY; nitrate reductase 2 beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1780 narH; nitrate reductase 1 beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1593 narV; nitrate reductase 2 gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1778 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D STM474_2355 napA; nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D STM474_2352 napB; cytochrome c-type protein NapB precursor K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D STM474_3641 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D STM474_3642 nirD; nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D STM474_4473 nrfA; cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D STM474_0924 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D STM474_1815 putative glutamic dehyrogenase-like protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D STM474_1303 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D STM474_4185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D STM474_3490 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D STM474_3491 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D STM474_0553 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D STM474_4663 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D STM474_p1066 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D STM474_0180 yadF; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:seb00920]
D STM474_2547 cysP; thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D STM474_4245 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D STM474_2546 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D STM474_2545 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D STM474_2544 cysA; sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D STM474_3074 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D STM474_3075 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D STM474_3073 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D STM474_4601 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D STM474_3088 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D STM474_3090 cysJ; sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D STM474_3089 cysI; sulfite reductase subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D STM474_2652 asrA; anaerobic sulfide reductase K16950 asrA; anaerobic sulfite reductase subunit A
D STM474_2653 asrB; anaerobic sulfite reductase subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D STM474_2654 asrC; anaerobic sulfite reductase subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D STM474_1388 ttrA; tetrathionate reductase complex subunit A K08357 ttrA; tetrathionate reductase subunit A
D STM474_1390 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D STM474_1389 ttrC; tetrathionate reductase complex subunit C K08359 ttrC; tetrathionate reductase subunit C
D STM474_2150 phsA; thiosulfate reductase precursor K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D STM474_2149 phsB; thiosulfate reductase electron transport protein PhsB K08353 phsB; thiosulfate reductase electron transport protein
D STM474_2148 phsC; thiosulfate reductase cytochrome B subunit K08354 phsC; thiosulfate reductase cytochrome b subunit
D STM474_2635 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D STM474_3692 glpE; thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D STM474_3872 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D STM474_0479 putative lyase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D STM474_2532 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D STM474_4371 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D STM474_4284 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D STM474_4501 putative anaerobic dimethylsulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D STM474_0951 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D STM474_4502 putative anaerobic dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D STM474_0952 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D STM474_1507 dmsb; Anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D STM474_4503 dmsC; dmso reductase anchor subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D STM474_0953 dmsC; anaerobic dimethyl sulfoxide reductase, C subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:seb00061]
D STM474_0241 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D STM474_3541 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D STM474_3542 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D STM474_2465 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D STM474_3020 iacP; acyl carrier protein K02078 acpP; acyl carrier protein
D STM474_1193 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D STM474_1191 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D STM474_1190 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D STM474_2477 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D STM474_1194 fabf; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D STM474_1192 fabg; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D STM474_1059 fabA; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D STM474_0236 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D STM474_1714 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D STM474_1840 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:seb00071]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_2488 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_4160 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_0883 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D STM474_0324 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D STM474_1840 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D STM474_3157 aas; Bifunctional protein aas K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D STM474_1639 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D STM474_1766 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D STM474_1580 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D STM474_4224 putative alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:seb00561]
D STM474_0546 glxK; glycerate kinase II K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_3104 putative glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_3404 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_3696 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D STM474_4293 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D STM474_4268 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D STM474_4429 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D STM474_1189 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D STM474_3361 ygiH; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D STM474_3326 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D STM474_4430 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D STM474_4494 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:seb00564]
D STM474_3873 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D STM474_3693 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D STM474_2380 glpA; sn-glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D STM474_2381 glpB; anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D STM474_2382 glpC; sn-glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D STM474_4429 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D STM474_3361 ygiH; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D STM474_3326 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D STM474_4430 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D STM474_4135 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D STM474_4139 pldB; lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D STM474_3720 ugpQ; cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D STM474_2378 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D STM474_3157 aas; Bifunctional protein aas K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D STM474_2562 eutA; reactivating factor for ethanolamine ammonia lyase K04019 eutA; ethanolamine utilization protein EutA
D STM474_2561 eutB; ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D STM474_2560 eutC; ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D STM474_4246 ushB; CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D STM474_0231 cdsA; CDP-diglyceride synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D STM474_2765 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D STM474_4545 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D STM474_1977 pgsA; phosphatidylglycerophosphate synthetase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D STM474_0440 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D STM474_1725 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D STM474_2674 yfhb; Uncharacterized protein yfhB K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D STM474_1757 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D STM474_0837 ybhO; cardiolipin synthase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D STM474_1143 ymdC; putative phospholipase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:seb00565]
D STM474_4135 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:seb00600]
D STM474_4623 srfJ; lysosomal glucosyl ceramidase-like protein K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D STM474_4494 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D STM474_4135 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D STM474_4135 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:seb00592]
D STM474_4135 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D STM474_2488 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_4160 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:seb01040]
D STM474_0527 tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D STM474_0485 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D STM474_1753 yciA; acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:seb00230]
D STM474_3339 nudF; ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D STM474_3661 nudE; ADP-ribose diphosphatase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D STM474_4774 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D STM474_0719 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D STM474_1799 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D STM474_2460 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D STM474_4361 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D STM474_2603 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D STM474_1915 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D STM474_2670 purG; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D STM474_2602 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D STM474_0554 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D STM474_0555 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D STM474_2590 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D STM474_1230 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D STM474_4362 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D STM474_0503 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D STM474_0515 ushA; protein UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D STM474_3067 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D STM474_0702 nagD; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D STM474_3663 yrfG; putative hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D STM474_0512 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D STM474_2524 xapA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D STM474_4775 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D STM474_0408 yaie; UPF0345 protein yaiE K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D STM474_2774 yfih; UPF0124 protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D STM474_0179 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D STM474_2612 imdH; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D STM474_2628 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D STM474_4790 yjjX; NTPase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D STM474_3251 yggV; putative deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D STM474_0332 gpt; xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D STM474_2611 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D STM474_2540 yfeJ; glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D STM474_0149 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D STM474_3914 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D STM474_2373 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D STM474_2945 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D STM474_2374 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D STM474_2946 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D STM474_4648 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D STM474_0217 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D STM474_2429 yfbR; 5'-nucleotidase YfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D STM474_2075 phage protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D STM474_3916 spoT; (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D STM474_2605 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D STM474_4091 gppA; guanosine pentaphosphate phosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D STM474_3101 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D STM474_4117 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D STM474_4563 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D STM474_1470 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D STM474_2092 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D STM474_3114 ygdh; LOG family protein ygdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D STM474_4600 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D STM474_0508 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D STM474_3098 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D STM474_3337 icc; cyclic 3',5'-adenosine monophosphate phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D STM474_0092 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D STM474_3073 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D STM474_3074 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D STM474_3075 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D STM474_1089 hiuh; 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D STM474_0544 allB; allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D STM474_0548 allC; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D STM474_0547 putative allantoin catabolism protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D STM474_0536 allA; ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D STM474_0549 allD; ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D STM474_0553 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D STM474_4663 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:seb00240]
D STM474_0070 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D STM474_0069 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D STM474_4658 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D STM474_4657 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D STM474_4641 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D STM474_1159 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D STM474_1050 pyrD; dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D STM474_3906 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D STM474_1722 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D STM474_0227 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D STM474_2628 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D STM474_3098 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D STM474_3532 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D STM474_3375 ygiP; putative metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D STM474_3097 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D STM474_0966 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D STM474_1305 nudg; CTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D STM474_2207 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D STM474_0515 ushA; protein UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D STM474_3067 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D STM474_0702 nagD; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D STM474_4763 nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D STM474_4147 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D STM474_0408 yaie; UPF0345 protein yaiE K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D STM474_2601 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D STM474_4600 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D STM474_0682 rihA; ribonucleoside hydrolase 1 K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-]
D STM474_0054 rihC; ribonucleoside hydrolase RihC K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-]
D STM474_3114 ygdh; LOG family protein ygdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D STM474_2272 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D STM474_3494 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D STM474_4648 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D STM474_2206 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D STM474_2373 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D STM474_2945 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D STM474_2374 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D STM474_2946 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D STM474_2429 yfbR; 5'-nucleotidase YfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D STM474_2075 phage protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D STM474_1197 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D STM474_3904 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D STM474_4773 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D STM474_1767 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D STM474_3147 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D STM474_2275 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D STM474_2276 yeiA; dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D STM474_1522 ydfG; 3-hydroxy acid dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:seb00250]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D STM474_2754 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D STM474_4712 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D STM474_3766 putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D STM474_3254 ansB; L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D STM474_1298 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D STM474_0872 ybiK; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D STM474_4056 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D STM474_0701 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D STM474_0323 yafv; UPF0012 hydrolase yafV K13566 NIT2; omega-amidase [EC:3.5.1.3]
D STM474_2428 yfbQ; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D STM474_4523 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D STM474_3448 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D STM474_4307 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D STM474_4563 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D STM474_1230 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D STM474_4658 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D STM474_4657 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D STM474_2927 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D STM474_4723 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_2926 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_1535 yneI; putative succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D STM474_3490 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D STM474_3491 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D STM474_1815 putative glutamic dehyrogenase-like protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D STM474_1303 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D STM474_1118 puta; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D STM474_4185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D STM474_0070 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D STM474_0069 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D STM474_1536 yneH; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D STM474_4040 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D STM474_2460 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:seb00260]
D STM474_4414 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D STM474_0002 thrA; Bifunctional aspartokinase/homoserine dehydrogenase 1 K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D STM474_4285 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D STM474_3706 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D STM474_0003 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D STM474_0004 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D STM474_0921 ltaA; L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D STM474_2659 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D STM474_1130 ycdW; putative oxidoreductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D STM474_3818 yiaE; 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D STM474_0546 glxK; glycerate kinase II K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_3104 putative glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_3404 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D STM474_0797 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D STM474_4791 gpmB; phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D STM474_3877 pmgI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D STM474_3209 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D STM474_0963 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D STM474_4784 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D STM474_1522 ydfG; 3-hydroxy acid dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D STM474_3882 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D STM474_3881 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D STM474_3200 gcvP; glycine cleavage complex protein P, glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D STM474_3202 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_3201 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D STM474_2765 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D STM474_1848 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D STM474_3116 sdaB; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D STM474_2285 putative L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D STM474_3394 tdcG; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D STM474_4083 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D STM474_3398 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D STM474_3977 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D STM474_3162 ygeA; putative racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D STM474_1744 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D STM474_1743 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:seb00270]
D STM474_3872 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D STM474_0479 putative lyase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D STM474_2532 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D STM474_3312 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D STM474_1569 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D STM474_4378 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D STM474_4143 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D STM474_3238 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D STM474_0174 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D STM474_0175 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D STM474_0216 pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D STM474_2774 yfih; UPF0124 protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D STM474_4442 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D STM474_1870 yebR; putative nucleotide-binding protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D STM474_2023 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D STM474_2955 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D STM474_4414 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D STM474_0002 thrA; Bifunctional aspartokinase/homoserine dehydrogenase 1 K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D STM474_4285 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D STM474_3706 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D STM474_4371 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D STM474_4284 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D STM474_4081 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D STM474_2956 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D STM474_3243 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D STM474_2635 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D STM474_3162 ygeA; putative racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D STM474_1984 yedO; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D STM474_3519 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D STM474_1848 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D STM474_3116 sdaB; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D STM474_2285 putative L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D STM474_3394 tdcG; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D STM474_2543 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D STM474_3209 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D STM474_0963 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:seb00280]
D STM474_4081 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_0883 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_2488 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_4160 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_4619 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D STM474_2927 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:seb00290]
D STM474_4083 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D STM474_3398 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D STM474_0117 leuC; isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D STM474_0116 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D STM474_0345 putative 3-isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D STM474_0118 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D STM474_0122 ilvI; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_3970 ilvB; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_4079 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_0123 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D STM474_3969 ilvN; acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D STM474_4080 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D STM474_4087 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D STM474_3698 Putative dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D STM474_4082 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D STM474_4081 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D STM474_3837 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D STM474_2428 yfbQ; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D STM474_0119 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:seb00300]
D STM474_4414 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D STM474_0002 thrA; Bifunctional aspartokinase/homoserine dehydrogenase 1 K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D STM474_4285 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D STM474_3706 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D STM474_2592 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D STM474_0067 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D STM474_0222 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D STM474_3635 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D STM474_2586 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D STM474_4124 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D STM474_3160 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D STM474_0129 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D STM474_0130 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:seb00310]
D STM474_0760 sucB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_3162 ygeA; putative racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D STM474_2664 cadA; lysine decarboxylase 1 K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D STM474_0243 ldcC; lysine decarboxylase 2 K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D STM474_2458 putative diaminopimelate decarboxylase K23385 dokD; D-ornithine/D-lysine decarboxylase [EC:4.1.1.116]
D STM474_3372 oat; putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D STM474_1610 ydcW; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D STM474_2927 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D STM474_4723 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_2926 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_2924 protein CsiD K15737 csiD; glutarate dioxygenase [EC:1.14.11.64]
D STM474_2925 ygaF; hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D STM474_1636 putative cytoplasmic protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D STM474_1369 ydiJ; putative oxidase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:seb00220]
D STM474_4662 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D STM474_4666 argI; ornithine carbamoyltransferase subunit I K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D STM474_3448 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D STM474_4307 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D STM474_4664 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D STM474_1536 yneH; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D STM474_4185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D STM474_1815 putative glutamic dehyrogenase-like protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D STM474_1303 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D STM474_0553 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D STM474_4663 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D STM474_2428 yfbQ; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D STM474_3138 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D STM474_4306 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D STM474_4305 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D STM474_3635 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D STM474_4304 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:seb00330]
D STM474_3494 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D STM474_4492 adiA; arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D STM474_3234 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D STM474_3225 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D STM474_3262 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D STM474_0722 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D STM474_0175 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D STM474_0174 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D STM474_3372 oat; putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D STM474_1610 ydcW; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D STM474_1512 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D STM474_1308 astA; arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D STM474_1310 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D STM474_1307 argD; bifunctional succinylornithine transaminase/acetylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D STM474_1309 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D STM474_1311 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D STM474_3277 putative oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D STM474_0402 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D STM474_1118 puta; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D STM474_0337 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D STM474_0338 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D STM474_1385 putative proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:seb00340]
D STM474_2156 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D STM474_2163 hisI; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D STM474_2161 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D STM474_2160 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D STM474_2162 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D STM474_2159 hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D STM474_2158 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D STM474_2157 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D STM474_0816 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D STM474_0815 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D STM474_0812 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D STM474_0813 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:seb00350]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D STM474_2158 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D STM474_4442 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D STM474_2265 putative glutathione S-transferase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D STM474_3278 putative NAD-dependent aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D STM474_1639 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D STM474_1766 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D STM474_1580 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D STM474_4224 putative alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D STM474_1091 hpaB; 4-hydroxyphenylacetate catabolism K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D STM474_1090 hpaC; 4-hydroxyphenylacetate catabolism K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D STM474_1095 hpaD; 4-hydroxyphenylacetate catabolism K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D STM474_1094 hpaE; 4-hydroxyphenylacetate catabolism K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D STM474_1096 hpcD; 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D STM474_1093 hpaG; 4-hydroxyphenylacetate catabolism K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D STM474_1097 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D STM474_1098 hpaI; 4-hydroxyphenylacetate catabolism K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D STM474_4723 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_2926 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_2267 putative gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D STM474_2266 FAA-hydrolase-family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:seb00360]
D STM474_3278 putative NAD-dependent aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D STM474_2158 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D STM474_4442 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D STM474_3712 yhhY; putative acetyltransferase YhhY K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D STM474_1824 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D STM474_4291 katG; hydroperoxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:seb00380]
D STM474_0760 sucB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_2506 indolepyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D STM474_1323 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6]
D STM474_4291 katG; hydroperoxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:seb00400]
D STM474_2783 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D STM474_1351 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D STM474_0785 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D STM474_3653 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D STM474_1363 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D STM474_3566 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D STM474_1364 aroE; quinate/shikimate dehydrogenase K05887 ydiB; quinate/shikimate dehydrogenase [EC:1.1.1.282]
D STM474_3654 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D STM474_0405 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D STM474_0964 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D STM474_2483 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D STM474_1740 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D STM474_1741 trpD; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D STM474_1742 trpC; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D STM474_1744 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D STM474_1743 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D STM474_2782 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D STM474_1270 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D STM474_2780 pheA; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D STM474_2158 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D STM474_4442 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:seb00410]
D STM474_0189 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D STM474_2927 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D STM474_1610 ydcW; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D STM474_0190 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D STM474_2275 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D STM474_2276 yeiA; dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_4619 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:seb00430]
D STM474_3718 ggt; gamma-glutamyltranspeptidase periplasmic precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D STM474_2435 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D STM474_2434 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:seb00440]
D STM474_0452 phnX; phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D STM474_0451 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D STM474_4483 phnO; aminoalkylphosphonic acid N-acetyltransferase K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280]
C 00450 Selenocompound metabolism [PATH:seb00450]
D STM474_4284 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D STM474_3312 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D STM474_1569 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D STM474_4378 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D STM474_4143 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D STM474_1377 sufS; bifunctional cysteine desulfurase/selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D STM474_0945 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D STM474_1509 ynfe; Putative dimethyl sulfoxide reductase chain ynfE K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9]
D STM474_1508 ynff; putative dimethyl sulfoxide reductase chain ynfF K07310 ynfF; Tat-targeted selenate reductase subunit YnfF [EC:1.97.1.9]
D STM474_3074 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D STM474_3075 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D STM474_1301 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D STM474_4642 putative selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D STM474_3855 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D STM474_2242 metG; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:seb00460]
D STM474_2255 bglX; periplasmic beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D STM474_3718 ggt; gamma-glutamyltranspeptidase periplasmic precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D STM474_3766 putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D STM474_3254 ansB; L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D STM474_1298 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D STM474_0872 ybiK; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D STM474_4056 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D STM474_2659 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:seb00470]
D STM474_1823 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D STM474_4441 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D STM474_0136 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D STM474_0395 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D STM474_3162 ygeA; putative racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D STM474_1536 yneH; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D STM474_4314 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D STM474_0132 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D STM474_1694 aeep; L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D STM474_4712 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D STM474_3977 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D STM474_1984 yedO; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D STM474_4124 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D STM474_3160 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D STM474_2458 putative diaminopimelate decarboxylase K23385 dokD; D-ornithine/D-lysine decarboxylase [EC:4.1.1.116]
D STM474_2456 putative cytoplasmic protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D STM474_1824 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:seb00480]
D STM474_3718 ggt; gamma-glutamyltranspeptidase periplasmic precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D STM474_0736 ybgl; UPF0271 protein ybgL K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D STM474_0734 ybgJ; putative carboxylase K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D STM474_0735 ybgK; putative carboxylase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D STM474_0603 site-specific recombinase, phage integrase family K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D STM474_2956 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D STM474_3243 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D STM474_4675 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D STM474_2640 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D STM474_1049 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D STM474_0331 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D STM474_1458 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D STM474_4462 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D STM474_0888 yliJ; glutathione s-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D STM474_2445 yfcF; putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D STM474_3765 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D STM474_1236 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D STM474_2166 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D STM474_1918 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D STM474_1345 btuE; putative glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D STM474_3262 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D STM474_0722 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D STM474_0175 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D STM474_3289 gsp; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D STM474_4623 srfJ; lysosomal glucosyl ceramidase-like protein K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:seb00540]
D STM474_0237 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D STM474_0140 lpxc; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D STM474_0235 lpxd; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D STM474_0556 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D STM474_0238 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D STM474_0971 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D STM474_3475 yrbH; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D STM474_1789 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D STM474_3476 yrbI; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D STM474_0974 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D STM474_3897 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D STM474_1150 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D STM474_1921 msbb; Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D STM474_4482 lpxO; putative dioxygenase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D STM474_1333 putative outer membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D STM474_2306 yeiU; putative permease K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D STM474_4489 yjdB; putative cell division protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D STM474_3807 yhjW; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D STM474_0649 pagP; palmitoyl transferase for Lipid A K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D STM474_2397 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D STM474_2341 putative outer membrane protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D STM474_2501 ddg; lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D STM474_0325 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D STM474_3354 rfaE; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D STM474_0257 yaeD; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D STM474_3883 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D STM474_3885 rfaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D STM474_3884 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D STM474_3894 rfaP; lipopolysaccharide core biosynthetic protein K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D STM474_4302 yijP; membrane protein YijP K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D STM474_3896 rfaQ; lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D STM474_3880 yibD; glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D STM474_3889 rfaY; lipopolysaccharide core biosynthesis protein K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D STM474_3888 rfaZ; lipopolysaccharide core biosynthesis protein K12981 waaZ; KDO transferase III [EC:2.4.99.-]
D STM474_3895 rfaG; glucosyltransferase I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D STM474_3892 rfab; Lipopolysaccharide 1,6-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
D STM474_3887 rfaK; putative hexose transferase K03280 waaK; UDP-N-acetylglucosamine:(glucosyl)LPS alpha-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.56]
D STM474_3891 rfaI; lipopolysaccharide-alpha-1,3-D-galactosyltransferase K03278 waaI; UDP-D-galactose:(glucosyl)LPS alpha-1,3-D-galactosyltransferase [EC:2.4.1.44]
D STM474_3890 rfaJ; lipopolysaccharide glucosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58]
D STM474_3886 rfaL; O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:seb00542]
D STM474_4096 rfe; undecaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:seb00541]
D STM474_1769 galU; UTP--glucose-1-phosphate uridylyltransferase subunit GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_2183 galF; UTP--glucose-1-phosphate uridylyltransferase subunit GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D STM474_0801 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D STM474_2165 udg; UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D STM474_2180 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D STM474_4100 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D STM474_2182 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D STM474_2179 rfbC; dTDP-4,deoxyrhamnose 3,5 epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D STM474_2181 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D STM474_4103 wecE; TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D STM474_4102 wecD; lipopolysaccharide biosynthesis protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D STM474_2177 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D STM474_2176 rfbG; CDP glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D STM474_2175 rfbH; CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D STM474_2178 rfbI; CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D STM474_2174 rfbJ; CDP-abequose synthase K12455 rfbJ; CDP-abequose synthase [EC:1.1.1.341]
D STM474_1474 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D STM474_2168 rfbK; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D STM474_2189 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D STM474_2190 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D STM474_2169 rfbM; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D STM474_2194 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D STM474_2193 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D STM474_4041 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D STM474_4098 wecB; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D STM474_4099 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:seb00550]
D STM474_3467 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D STM474_4321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D STM474_0135 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D STM474_0132 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D STM474_0129 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D STM474_0136 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D STM474_0395 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D STM474_0130 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D STM474_0230 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D STM474_3359 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D STM474_0891 ybjG; putative undecaprenyl-diphosphatase YbjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D STM474_0131 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D STM474_0134 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D STM474_3486 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D STM474_3660 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D STM474_0199 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D STM474_2633 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D STM474_1943 putative penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D STM474_0661 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D STM474_0128 ftsI; penicillin-binding protein 3 precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D STM474_1858 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D STM474_2147 dacD; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_0889 dacC; D-alanyl-D-alanine carboxypeptidase fraction C K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_0658 dacA; D-alanyl-D-alanine carboxypeptidase fraction A K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_3459 dacB; D-alanyl-D-alanine carboxypeptidase/endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D STM474_2581 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:seb00552]
D STM474_3359 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D STM474_0891 ybjG; putative undecaprenyl-diphosphatase YbjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D STM474_4096 rfe; undecaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:seb00543]
D STM474_2188 wcaJ; putative UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D STM474_2191 wcaI; glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D STM474_2195 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D STM474_2196 wcaE; putative glycosyl transferase K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-]
D STM474_2198 wcaC; glycosyl transferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
D STM474_2199 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-]
D STM474_2200 wcaA; putative glycosyl transferase K25875 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA
D STM474_2185 wcaL; putative glycosyl transferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
D STM474_2186 wcaK; putative pyruvyl transferase K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ
D STM474_4096 rfe; undecaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D STM474_4107 wecG; putative UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D STM474_4105 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D STM474_3872 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:seb00730]
D STM474_4350 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D STM474_2233 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D STM474_4348 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D STM474_2647 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D STM474_0445 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D STM474_4345 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D STM474_0442 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D STM474_4346 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D STM474_2234 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D STM474_4349 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D STM474_0439 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D STM474_4546 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D STM474_1205 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D STM474_0508 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:seb00740]
D STM474_1726 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D STM474_0436 ribd; Riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D STM474_0893 ybji; Phosphatase ybjI K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D STM474_4127 yigB; flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D STM474_3349 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D STM474_0437 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D STM474_1432 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D STM474_0048 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D STM474_4443 aphA; acid phosphatase/phosphotransferase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2]
D STM474_4514 phoN; non-specific acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D STM474_1090 hpaC; 4-hydroxyphenylacetate catabolism K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D STM474_4158 fre; FMN reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D STM474_2234 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D STM474_3339 nudF; ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D STM474_1233 ymfB; putative MutT-like protein K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D STM474_2454 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D STM474_3061 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:seb00750]
D STM474_1455 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D STM474_1457 pdxY; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D STM474_2538 pdxK; pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D STM474_3217 epd; erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D STM474_2469 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D STM474_0963 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D STM474_0095 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D STM474_2683 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D STM474_0004 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:seb00760]
D STM474_2754 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D STM474_0781 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D STM474_0153 nadC; NadC protein K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D STM474_0991 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D STM474_2524 xapA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D STM474_4775 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D STM474_4786 nadR; nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D STM474_0515 ushA; protein UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D STM474_3067 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D STM474_0702 nagD; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D STM474_0666 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D STM474_3098 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D STM474_4352 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D STM474_1314 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D STM474_2968 ygaD; competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D STM474_1297 pncA; nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D STM474_1218 cobB; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D STM474_2806 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D STM474_4309 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D STM474_1486 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D STM474_1487 pntB; pyridine nucleotide transhydrogenase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D STM474_4723 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_2926 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D STM474_1535 yneI; putative succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:seb00770]
D STM474_0122 ilvI; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_3970 ilvB; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_4079 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D STM474_0123 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D STM474_3969 ilvN; acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D STM474_4080 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D STM474_4087 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D STM474_3698 Putative dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D STM474_4082 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D STM474_0191 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D STM474_2678 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D STM474_0454 apbA; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D STM474_0190 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D STM474_4323 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D STM474_3903 dfp; flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D STM474_3098 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D STM474_3898 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D STM474_0147 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D STM474_2682 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D STM474_3750 acpT; holo-(acyl carrier protein) synthase 2 K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D STM474_0422 yajB; acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D STM474_4081 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D STM474_2275 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D STM474_2276 yeiA; dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D STM474_0189 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:seb00780]
D STM474_0822 bioC; biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D STM474_2477 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D STM474_1194 fabf; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D STM474_1192 fabg; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D STM474_0236 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D STM474_1714 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D STM474_3677 bioH; carboxylesterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D STM474_0821 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D STM474_0819 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D STM474_0823 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D STM474_1499 bioD; putative dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D STM474_0820 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D STM474_4322 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D STM474_3816 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:seb00785]
D STM474_0656 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D STM474_0654 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D STM474_4781 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_0160 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D STM474_0161 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D STM474_0759 sucA; alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D STM474_0760 sucB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D STM474_3200 gcvP; glycine cleavage complex protein P, glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D STM474_3202 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D STM474_3201 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:seb00790]
D STM474_2282 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D STM474_1933 nudB; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D STM474_3360 folB; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D STM474_0192 folK; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D STM474_3453 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D STM474_p301 folP; Dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D STM474_0091 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D STM474_2464 folC; tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D STM474_1726 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D STM474_3636 pabA; para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D STM474_1846 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D STM474_1195 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D STM474_3091 ptpS; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D STM474_3095 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D STM474_0476 ybaX; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D STM474_3113 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D STM474_3092 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D STM474_0827 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D STM474_0829 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D STM474_0831 moaE; molybdopterin synthase large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D STM474_0008 mogA; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D STM474_0828 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D STM474_0871 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D STM474_4173 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:seb00670]
D STM474_0091 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D STM474_0563 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D STM474_2659 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D STM474_2603 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D STM474_4362 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D STM474_3572 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D STM474_3202 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D STM474_4378 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D STM474_3147 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D STM474_1773 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D STM474_4290 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D STM474_3208 ygfA; putative ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:seb00860]
D STM474_2516 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D STM474_1794 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D STM474_0211 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D STM474_0387 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D STM474_4116 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D STM474_4115 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D STM474_4353 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D STM474_2554 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D STM474_4182 hemN; coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D STM474_4189 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D STM474_4165 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D STM474_0510 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D STM474_4114 hemX; putative uroporphyrinogen III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D STM474_3644 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D STM474_0459 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D STM474_2110 cbiK; vitamin B12 biosynthetic protein K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D STM474_2109 cobI; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D STM474_2112 cbiH; precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D STM474_2114 cbiF; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D STM474_2113 cbiG; cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D STM474_2111 cbiJ; cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D STM474_2117 cbiD; cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D STM474_2115 cbiT; cobalt-precorrin-6Y C(15)-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D STM474_2116 cbiE; cobalt-precorrin-6Y C(5)-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D STM474_2118 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D STM474_2120 cbiA; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D STM474_1735 btuR; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D STM474_2104 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D STM474_2119 cbiB; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D STM474_2103 cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D STM474_2102 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D STM474_2101 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D STM474_0664 cobC; alpha ribazole-5'-P phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D STM474_2143 pduX; propanediol utilization protein K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D STM474_0665 cobD; threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D STM474_2570 eutT; putative cobalamin adenosyltransferase K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
D STM474_3608 bfr; bacterioferritin, iron storage and detoxification protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:seb00130]
D STM474_4427 ubiC; chorismate pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D STM474_4428 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D STM474_4157 yigC; 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D STM474_2454 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D STM474_3061 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D STM474_3203 visC; protein VisC K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D STM474_2372 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D STM474_3204 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D STM474_4149 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D STM474_0692 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D STM474_2406 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D STM474_0615 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D STM474_2405 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D STM474_2404 yfbB; acyl-CoA thioester hydrolase YfbB K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D STM474_2402 menC; o-succinylbenzoic acid (OSB) synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D STM474_2401 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D STM474_2403 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D STM474_1370 ydiI; esterase YdiI K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D STM474_4273 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D STM474_1112 wraB; TrpR binding protein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D STM474_4598 ytfG; putative reductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:seb00900]
D STM474_0442 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D STM474_0229 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D STM474_3070 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D STM474_1797 ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D STM474_3069 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D STM474_2625 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D STM474_0052 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_2454 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D STM474_3061 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D STM474_3186 idi; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D STM474_0443 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D STM474_3465 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D STM474_0230 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:seb00907]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_4684 yjgB; putative alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D STM474_2488 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_4160 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D STM474_2577 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D STM474_3223 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D STM474_2437 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D STM474_2438 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:seb00523]
D STM474_2180 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D STM474_4100 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D STM474_2182 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D STM474_2179 rfbC; dTDP-4,deoxyrhamnose 3,5 epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D STM474_2181 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:seb01054]
D STM474_4712 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:seb01053]
D STM474_2406 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D STM474_0615 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D STM474_0617 entB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D STM474_0618 entA; 2,3-dihydroxybenzoate-2,3-dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D STM474_0604 entD; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D STM474_0616 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D STM474_0608 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D STM474_0619 ybdb; Esterase ybdB K24147 entH; proofreading thioesterase EntH
C 01055 Biosynthesis of vancomycin group antibiotics
D STM474_4100 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D STM474_2182 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:seb00946]
D STM474_2255 bglX; periplasmic beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:seb00332]
D STM474_0337 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D STM474_0338 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:seb00261]
D STM474_3074 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D STM474_3075 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D STM474_4414 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D STM474_0002 thrA; Bifunctional aspartokinase/homoserine dehydrogenase 1 K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D STM474_4285 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D STM474_3706 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D STM474_2592 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D STM474_0067 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:seb00521]
D STM474_2504 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D STM474_0719 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D STM474_2650 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D STM474_4622 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D STM474_4629 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D STM474_2180 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D STM474_4100 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D STM474_2182 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D STM474_2179 rfbC; dTDP-4,deoxyrhamnose 3,5 epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D STM474_2181 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D STM474_2504 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:seb00525]
D STM474_2180 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D STM474_4100 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D STM474_2182 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:seb00401]
D STM474_2782 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D STM474_2158 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D STM474_4442 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D STM474_1740 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D STM474_1191 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D STM474_1192 fabg; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D STM474_1714 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D STM474_3020 iacP; acyl carrier protein K02078 acpP; acyl carrier protein
D STM474_1193 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:seb00999]
D STM474_3238 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D STM474_3566 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D STM474_2255 bglX; periplasmic beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D STM474_2456 putative cytoplasmic protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:seb00362]
D STM474_2488 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_4160 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_2264 salicylate hydroxylase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_0057 putative oxalacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_0793 putative oxalacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_3511 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:seb00627]
D STM474_1075 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D STM474_3062 putative 3-polyprenyl-4-hydroxybenzoate decarboxylase K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61]
D STM474_3063 putative cytoplasmic protein K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61]
D STM474_2454 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D STM474_3061 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D STM474_1362 ydiF; coenzyme A transferase domain protein K19709 ydiF; acetate CoA-transferase [EC:2.8.3.8]
C 00364 Fluorobenzoate degradation [PATH:seb00364]
D STM474_4146 dlhH; dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:seb00625]
D STM474_1580 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D STM474_4224 putative alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D STM474_1639 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D STM474_1766 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D STM474_0347 putative hydrolase or acyltransferase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:seb00361]
D STM474_4146 dlhH; dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D STM474_0347 putative hydrolase or acyltransferase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:seb00623]
D STM474_4146 dlhH; dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:seb00633]
D STM474_0598 nfnB; dihydropteridine reductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D STM474_1443 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D STM474_1807 hydrogenase 1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D STM474_1548 putative hydrogenase-1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D STM474_3297 hybC; hydrogenase-2, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D STM474_1806 mbhs; Hydrogenase-1 small chain K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D STM474_1549 putative hydrogenase-1 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D STM474_3300 hypO; hydrogenase 2 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D STM474_2488 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D STM474_4160 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:seb00643]
D STM474_3278 putative NAD-dependent aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D STM474_2265 putative glutathione S-transferase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:seb00930]
D STM474_4161 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D STM474_2487 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:seb00626]
D STM474_1580 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D STM474_4224 putative alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D STM474_1639 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D STM474_1766 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:seb03020]
D STM474_4338 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D STM474_4339 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D STM474_3580 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D STM474_3915 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:seb03010]
D STM474_0967 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D STM474_0225 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D STM474_3599 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D STM474_3581 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D STM474_3588 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D STM474_4588 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D STM474_3613 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D STM474_3591 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D STM474_3504 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D STM474_3606 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D STM474_3582 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D STM474_3614 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D STM474_3583 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D STM474_3592 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D STM474_3441 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D STM474_2800 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D STM474_3596 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D STM474_4590 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D STM474_3601 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D STM474_0046 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D STM474_3363 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D STM474_4335 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D STM474_3602 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D STM474_3605 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D STM474_3604 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D STM474_3593 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D STM474_3590 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D STM474_4337 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D STM474_4591 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D STM474_4336 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D STM474_4334 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D STM474_3505 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D STM474_3595 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D STM474_3586 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D STM474_3598 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D STM474_3579 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D STM474_3589 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D STM474_2797 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D STM474_1340 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D STM474_3464 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D STM474_3600 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D STM474_3603 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D STM474_3594 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D STM474_2317 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D STM474_3463 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D STM474_3901 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D STM474_3597 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D STM474_3587 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D STM474_0489 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D STM474_4279 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D STM474_1188 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D STM474_3900 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D STM474_4017 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D STM474_1339 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D STM474_0490 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D STM474_3584 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D STM474_r2772 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4166 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4068 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r3562 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4364 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r0259 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r3559 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4366 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4169 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4318 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r0262 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r2770 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r0264 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4320 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r2769 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4171 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4072 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r3556 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r3558 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4368 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:seb00970]
D STM474_t2512 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t2513 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t0261 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t4168 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t4317 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t1263 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t4109 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2493 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2959 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2962 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2961 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t1245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2082 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D STM474_t2083 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D STM474_t2099 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D STM474_t2097 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D STM474_t0265 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D STM474_t4073 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D STM474_t0276 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D STM474_t1975 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D STM474_t0694 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D STM474_t0695 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D STM474_t0697 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D STM474_t0698 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D STM474_t2771 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D STM474_t4365 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D STM474_t3561 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D STM474_t4069 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D STM474_t3184 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4329 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t1976 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4549 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4551 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4110 tRNA-His K14226 tRNA-His; tRNA His
D STM474_t0260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D STM474_t4316 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D STM474_t4167 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D STM474_t0699 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t3450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4685 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t1974 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4111 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4757 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4759 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4758 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t0776 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t0779 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t2520 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t0780 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t0778 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t3135 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t3136 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t3447 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t3367 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t0696 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t0700 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t3265 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D STM474_t4518 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D STM474_t2322 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D STM474_t3806 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D STM474_t4112 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D STM474_t2080 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t1078 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t2963 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t0936 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t1128 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t3557 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D STM474_t4330 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D STM474_t4326 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D STM474_t0339 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D STM474_t4074 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D STM474_t4327 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D STM474_t1775 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D STM474_t1774 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D STM474_t1429 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t0777 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t2517 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t2518 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t2519 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t1430 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t3925 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D STM474_2516 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D STM474_0707 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D STM474_2965 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D STM474_1934 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D STM474_0987 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D STM474_3828 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D STM474_3827 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D STM474_1337 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D STM474_0950 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D STM474_4642 putative selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D STM474_3855 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D STM474_0558 cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D STM474_2242 metG; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D STM474_3572 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D STM474_4673 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D STM474_0669 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D STM474_0049 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D STM474_3187 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D STM474_1942 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D STM474_0251 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D STM474_2624 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D STM474_1341 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D STM474_1342 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D STM474_1456 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D STM474_4709 trpS2; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D STM474_3648 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:seb03060]
D STM474_3585 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D STM474_4332 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D STM474_3451 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D STM474_0426 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D STM474_0427 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D STM474_0425 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D STM474_4020 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D STM474_0142 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D STM474_3874 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D STM474_0141 yacA; SecA regulator SecM K13301 secM; secretion monitor
D STM474_2801 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D STM474_3738 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D STM474_4152 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D STM474_4153 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D STM474_4154 tatC; TatABCE protein translocation system subunit K03118 tatC; sec-independent protein translocase protein TatC
D STM474_0653 tatE; twin arginine translocase protein E K03425 tatE; sec-independent protein translocase protein TatE
D STM474_2687 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D STM474_0050 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:seb04122]
D STM474_2647 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D STM474_2635 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D STM474_3745 yhhP; sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D STM474_3615 yheL; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D STM474_3616 yheM; sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D STM474_3617 yheN; sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D STM474_1076 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D STM474_1232 mnma; tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D STM474_0831 moaE; molybdopterin synthase large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D STM474_0827 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D STM474_0830 moaD; molybdopterin synthase small subunit K03636 moaD; sulfur-carrier protein
D STM474_0870 moeB; molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D STM474_0829 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D STM474_0008 mogA; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D STM474_0828 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D STM474_0445 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D STM474_4347 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D STM474_4348 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:seb03018]
D STM474_3150 ygdP; dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D STM474_1181 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D STM474_4092 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D STM474_3096 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D STM474_3440 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D STM474_0846 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D STM474_4565 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D STM474_3438 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D STM474_4136 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D STM474_4095 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D STM474_4244 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D STM474_0013 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D STM474_4527 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D STM474_4558 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D STM474_2604 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D STM474_0193 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:seb03030]
D STM474_1908 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_p1044 putative inner membrane protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_0275 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_p204 yacC; YacC protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_0240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D STM474_0504 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D STM474_1198 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D STM474_0667 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D STM474_4761 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D STM474_4674 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D STM474_4015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D STM474_4440 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D STM474_3364 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D STM474_4450 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p1043 ssbB; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p228 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D STM474_0274 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D STM474_0239 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D STM474_4178 yjcD; putative xanthine/uracil permeases family protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_2529 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:seb03410]
D STM474_1460 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D STM474_2760 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D STM474_3258 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D STM474_3899 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D STM474_0751 nei; endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D STM474_2210 alkA; 3-methyl-adenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D STM474_3814 tag; 3-methyl-adenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D STM474_3366 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D STM474_1306 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D STM474_2294 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D STM474_4178 yjcD; putative xanthine/uracil permeases family protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D STM474_3189 recJ; ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_2529 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:seb03420]
D STM474_1213 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D STM474_4448 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D STM474_0824 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D STM474_1978 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D STM474_4128 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D STM474_4178 yjcD; putative xanthine/uracil permeases family protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_2529 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:seb03430]
D STM474_3049 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D STM474_4556 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D STM474_3152 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D STM474_4128 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D STM474_2152 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D STM474_2613 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D STM474_0444 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D STM474_1910 exoX; exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D STM474_3189 recJ; ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D STM474_4450 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p1043 ssbB; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p228 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D STM474_0240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D STM474_4015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D STM474_0504 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D STM474_0667 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D STM474_1198 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D STM474_0275 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_p204 yacC; YacC protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_1908 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_p1044 putative inner membrane protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_4674 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D STM474_4761 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_2529 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_2855 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STM474_3651 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:seb03440]
D STM474_3189 recJ; ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D STM474_4450 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p1043 ssbB; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p228 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D STM474_4014 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D STM474_2684 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D STM474_0506 recR; recombination protein RecR K06187 recR; recombination protein RecR
D STM474_2967 recA; recombinase A K03553 recA; recombination protein RecA
D STM474_4178 yjcD; putative xanthine/uracil permeases family protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D STM474_1927 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D STM474_1926 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D STM474_1931 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D STM474_3918 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D STM474_3140 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D STM474_3142 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D STM474_3139 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D STM474_0240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D STM474_4015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D STM474_0504 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D STM474_0667 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D STM474_1198 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D STM474_0275 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_p204 yacC; YacC protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_1908 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_p1044 putative inner membrane protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_4674 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D STM474_4761 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D STM474_4278 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D STM474_4589 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D STM474_0501 priC; primosomal replication protein N K04067 priC; primosomal replication protein N''
D STM474_4748 dnaI; primosomal protein DnaI K02317 dnaT; DNA replication protein DnaT
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:seb03250]
D STM474_3639 ppia; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda [PATH:seb03258]
D STM474_2700 prophage tail assembly protein K26975 K; Enterobacteria phage tail tip assembly protein K
D STM474_2699 vtai; Tail assembly protein I K26976 I; Enterobacteria phage tail tip assembly protein I
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:seb02010]
D STM474_2547 cysP; thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D STM474_4245 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D STM474_2546 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D STM474_2545 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D STM474_2544 cysA; sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D STM474_0806 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D STM474_3291 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D STM474_0807 modB; molybdate ABC transporter permease protein K02018 modB; molybdate transport system permease protein
D STM474_0808 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D STM474_0803 modf; Putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D STM474_0111 tbpA; thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D STM474_0110 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein
D STM474_0109 thiQ; thiamine transporter ATP-binding subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D STM474_1219 potD; spermidine/putrescine ABC transporter periplasmic substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D STM474_1220 potC; PotC protein K11070 potC; spermidine/putrescine transport system permease protein
D STM474_1222 potB; spermidine/putrescine ABC transporter membrane protein K11071 potB; spermidine/putrescine transport system permease protein
D STM474_1223 potA; putrescine/spermidine ABC transporter ATPase protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D STM474_0902 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein
D STM474_0905 potI; putrescine ABC transporter membrane protein K11074 potI; putrescine transport system permease protein
D STM474_0904 potH; putrescine ABC transporter membrane protein K11075 potH; putrescine transport system permease protein
D STM474_0903 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D STM474_0449 phnS; 2-aminoethylphosphonate transporter K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D STM474_0446 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D STM474_0447 phnU; 2-aminoethylphosphonate transporter K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D STM474_0448 phnT; 2-aminoethylphosphonate transporter K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D STM474_2949 proX; glycine betaine transporter periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D STM474_2948 proW; glycine betaine transporter membrane protein K02001 proW; glycine betaine/proline transport system permease protein
D STM474_2947 proV; glycine betaine transporter ATP-binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D STM474_2253 yehZ; putative transport protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D STM474_1503 putative ABC transporter periplasmic component K05845 opuC; osmoprotectant transport system substrate-binding protein
D STM474_2250 yehW; putative permease transmembrane component K05846 opuBD; osmoprotectant transport system permease protein
D STM474_2252 yehY; putative ABC-type proline/glycine betaine transport system permease component K05846 opuBD; osmoprotectant transport system permease protein
D STM474_1502 putative ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein
D STM474_1504 putative transport system permease component K05846 opuBD; osmoprotectant transport system permease protein
D STM474_2251 yehX; ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D STM474_1501 ABC-type proline/glycine betaine transport system K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D STM474_4423 malE; maltose ABC transporter periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D STM474_4422 malF; maltose transporter membrane protein K10109 malF; maltose/maltodextrin transport system permease protein
D STM474_4421 malG; maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D STM474_4424 malK; maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D STM474_3470 yrbC; putative transport protein K07323 mlaC; phospholipid transport system substrate-binding protein
D STM474_3471 yrbD; putative transport protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D STM474_3472 yrbE; putative transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D STM474_3469 anti-sigma factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D STM474_3473 yrbF; putative ABC transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D STM474_4063 rbsB; D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D STM474_4062 rbsC; ribose ABC transporter permease protein K10440 rbsC; ribose transport system permease protein
D STM474_4061 rbsA; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D STM474_4060 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D STM474_2279 mglB; galactose transport protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D STM474_2277 mglC; beta-methylgalactoside transporter inner membrane component K10541 mglC; methyl-galactoside transport system permease protein
D STM474_2278 mglA; galactose/methyl galaxtoside transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D STM474_3724 ugpB; glycerol-3-phosphate transporter periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D STM474_3723 ugpA; glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D STM474_3722 ugpE; glycerol-3-phosphate transporter membrane protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D STM474_3721 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D STM474_4036 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D STM474_4035 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D STM474_4034 pstA; phosphate transporter permease subunit K02038 pstA; phosphate transport system permease protein
D STM474_4033 pstB; phosphate transporter subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D STM474_2452 argT; lysine/arginine/ornithine transport protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D STM474_2449 hisM; histidine transport system permease K10015 hisM; histidine transport system permease protein
D STM474_2450 hisQ; histidine transport system permease protein K10016 hisQ; histidine transport system permease protein
D STM474_2448 hisP; histidine/lysine/arginine/ornithine transporter subunit K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D STM474_2451 hisJ; histidine ABC transporter ATP-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D STM474_0855 glnH; glutamine ABC transporter periplasmic protein K10036 glnH; glutamine transport system substrate-binding protein
D STM474_0854 glnP; glutamine ABC transporter permease protein K10037 glnP; glutamine transport system permease protein
D STM474_0853 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D STM474_4548 putative arginine-binding periplasmic protein K09996 artJ; arginine transport system substrate-binding protein
D STM474_0911 artJ; arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein
D STM474_0914 artI; arginine-binding periplasmic protein 1precursor K09997 artI; arginine transport system substrate-binding protein
D STM474_0912 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D STM474_0913 artQ; arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein
D STM474_0915 artP; arginine transporter ATP-binding subunit K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D STM474_0686 gltI; glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D STM474_0684 gltK; glutamate/aspartate transporter K10002 gltK; glutamate/aspartate transport system permease protein
D STM474_0685 gltJ; glutamate/aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D STM474_0683 gltL; glutamate/aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D STM474_1985 fliY; cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein
D STM474_1983 yecS; putative ABC transporter membrane protein K10009 tcyB; L-cystine transport system permease protein
D STM474_1982 yecC; putative amino-acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D STM474_3731 livK; leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D STM474_3734 livJ; Leu/Ile/Val/Thr-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D STM474_3730 livH; branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein
D STM474_3729 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D STM474_3728 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D STM474_3727 livF; leucine/isoleucine/valine transporter ATP-binding subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D STM474_0254 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D STM474_0531 sfbA; putative ABC-type transport system ATPase component K02073 metQ; D-methionine transport system substrate-binding protein
D STM474_0255 yaeE; DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein
D STM474_0533 sfbC; ABC transporter integral membrane protein K02072 metI; D-methionine transport system permease protein
D STM474_0256 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D STM474_0532 sfbB; putative ABC-type transport system ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D STM474_1764 oppa; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D STM474_1692 mppA; periplasmic murein tripeptide transport protein K15580 oppA; oligopeptide transport system substrate-binding protein
D STM474_1763 oppB; oligopeptide permease ABC transporter membrane component K15581 oppB; oligopeptide transport system permease protein
D STM474_1762 oppC; oligopeptide transport protein K15582 oppC; oligopeptide transport system permease protein
D STM474_1761 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D STM474_1760 oppF; oligopeptide transport protein K10823 oppF; oligopeptide transport system ATP-binding protein
D STM474_3802 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D STM474_3801 dppB; dipeptide transporter permease DppB K12369 dppB; dipeptide transport system permease protein
D STM474_3800 dppC; dipeptide transporter K12370 dppC; dipeptide transport system permease protein
D STM474_3799 dppD; dipeptide transporter ATP-binding subunit K12371 dppD; dipeptide transport system ATP-binding protein
D STM474_3798 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein
D STM474_1705 sapA; peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D STM474_1706 sapB; peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D STM474_1707 sapC; peptide transport protein K19228 sapC; cationic peptide transport system permease protein
D STM474_1708 sapD; peptide transport protein K19229 sapD; cationic peptide transport system ATP-binding protein
D STM474_1709 sapF; peptide transport protein K19230 sapF; cationic peptide transport system ATP-binding protein
D STM474_0874 yliB; putative ABC transporter periplasmic binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D STM474_0875 yliC; putative ABC transporter periplasmic binding protein K13890 gsiC; glutathione transport system permease protein
D STM474_0876 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D STM474_0873 yliA; glutathione transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D STM474_2309 yejA; putative ABC transporter periplasmic binding protein K13893 yejA; microcin C transport system substrate-binding protein
D STM474_2310 yejB; putative binding-protein-dependent transporter K13894 yejB; microcin C transport system permease protein
D STM474_2311 yejE; putative ABC-type dipeptide/oligopeptide/nickel transport system permease component K13895 yejE; microcin C transport system permease protein
D STM474_2312 yejF; putative ABC-type transport system ATPase component K13896 yejF; microcin C transport system ATP-binding protein
D STM474_0614 fepB; iron-enterobactin transporter periplasmic binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D STM474_0612 fepD; iron-enterobactin transporter membrane protein K23186 fepD; iron-siderophore transport system permease protein
D STM474_0611 fepG; iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein
D STM474_0610 fepC; iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D STM474_0202 fhuD; iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D STM474_0203 fhuB; ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D STM474_0201 fhuC; iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D STM474_0215 btuF; vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D STM474_1344 btuC; Vitamin B12 transport system permease protein btuC K06073 btuC; vitamin B12 transport system permease protein
D STM474_1346 btuD; vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D STM474_1923 znuA; zinc ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D STM474_1925 znuB; high-affinity zinc transporter membrane component K09816 znuB; zinc transport system permease protein
D STM474_1924 znuC; ABC superfamily high affinity Zn transport protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D STM474_3000 sitA; iron transporter: fur regulated K11604 sitA; manganese/iron transport system substrate-binding protein
D STM474_3002 sitC; putative permease K11605 sitC; manganese/iron transport system permease protein
D STM474_3003 sitD; putative permease K11606 sitD; manganese/iron transport system permease protein
D STM474_3001 sitB; putative ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D STM474_2107 cbiN; cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D STM474_2108 cbiM; cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D STM474_2106 cbiQ; vitamin B12 biosynthetic protein K02008 cbiQ; cobalt/nickel transport system permease protein
D STM474_2105 cbiO; cobalt transporter ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D STM474_3220 putative membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D STM474_3221 putative ABC-type cobalt transport system ATP-binding component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D STM474_3222 cysA; putative ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D STM474_4259 yneA; putative sugar transport protein K10555 lsrB; AI-2 transport system substrate-binding protein
D STM474_4257 ydeY; putative sugar transport protein K10556 lsrC; AI-2 transport system permease protein
D STM474_4258 ydeZ; putative ABC transporter, membrane component K10557 lsrD; AI-2 transport system permease protein
D STM474_4256 ego; putative ABC-type aldose transport system ATPase component K10558 lsrA; AI-2 transport system ATP-binding protein
D STM474_0745 putative ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D STM474_0746 putative ABC-type polysaccharide/polyol phosphate transport system ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D STM474_1214 lolC; outer membrane-specific lipoprotein transporter subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D STM474_1216 lolE; outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D STM474_1215 lolD; lipoprotein transporter ATP-binding subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D STM474_3993 ccmD; heme exporter protein C K02196 ccmD; heme exporter protein D
D STM474_2347 ccmD; heme exporter protein C K02196 ccmD; heme exporter protein D
D STM474_3994 ccmC; heme exporter protein K02195 ccmC; heme exporter protein C
D STM474_2348 ccmC; heme exporter protein K02195 ccmC; heme exporter protein C
D STM474_3995 ccmB; heme exporter protein K02194 ccmB; heme exporter protein B
D STM474_2349 ccmB; heme exporter protein K02194 ccmB; heme exporter protein B
D STM474_3996 ccmA; cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D STM474_2350 ccmA; cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D STM474_4677 yjgP; putative permease K07091 lptF; lipopolysaccharide export system permease protein
D STM474_4678 yjgQ; putative permease K11720 lptG; lipopolysaccharide export system permease protein
D STM474_3479 yhbG; putative ABC transporter ATP-binding protein YhbG K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D STM474_3736 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D STM474_3737 ftsE; cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D STM474_0970 msbA; lipid transporter ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D STM474_0481 mdla; Multidrug resistance-like ATP-binding protein mdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D STM474_0482 mdlb; Multidrug resistance-like ATP-binding protein mdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D STM474_2909 iroC; iron transporter: fur regulated K18895 iroC; ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
D STM474_2814 putative ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D STM474_4457 putative ABC-type bacteriocin/lantibiotic exporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D STM474_0943 cydC; cysteine/glutathione ABC transporter membrane/ATP-binding component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D STM474_0944 cydD; cysteine/glutathione ABC transporter membrane/ATP-binding component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D STM474_0929 ybjZ; macrolide transporter ATP-binding/permease protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D STM474_2360 yojI; multidrug transporter membrane component/ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:seb02060]
D STM474_2535 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D STM474_3413 phosphotransferase system mannitol/fructose-specific IIA component K02784 ptsH; phosphocarrier protein HPr
D STM474_3953 putative PTS system phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D STM474_2534 ptsH; phosphocarrier protein ptsH K02784 ptsH; phosphocarrier protein HPr
D STM474_2893 putative phosphotransferase system IIC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D STM474_2536 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D STM474_1200 ptgcb; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D STM474_0706 nagE; N-acetyl glucosamine specific PTS system components IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D STM474_2675 putative phosphotransferase system IIB component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D STM474_3857 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D STM474_1319 celC; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D STM474_1317 celA; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D STM474_1318 celB; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D STM474_0597 putative PTS system mannose-specific enzyme IIAB K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D STM474_1852 manX; mannose-specific enzyme IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D STM474_1853 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D STM474_1854 manZ; mannose-specific PTS system protein IID K02796 manZ; mannose PTS system EIID component
D STM474_4739 putative PTS permease K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D STM474_4740 putative PTS permease K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D STM474_0596 putative PTS system mannose-specific enzyme IIAB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D STM474_4741 putative PTS permease K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D STM474_0595 phosphotransferase system PTS, sorbose-specific IIC subunit K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D STM474_0594 putative PTS system mannose-specific enzyme IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D STM474_4742 ptnD; putative PTS permease K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D STM474_3946 PTS system fructose IIA component K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203]
D STM474_3945 putative PTS system protein K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D STM474_3944 putative PTS system protein K17466 dgaC; D-glucosaminate PTS system EIIC component
D STM474_3943 putative PTS system protein K17467 dgaD; D-glucosaminate PTS system EIID component
D STM474_2972 slrB; glucitol/sorbitol-specific PTS system component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D STM474_2886 putative glucitol-specific PTS enzyme III K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D STM474_2887 putative glucitol-specific PTS enzyme III K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D STM474_2971 srlE; glucitol/sorbitol-specific enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D STM474_2885 putative PTS system glucitol/sorbitol-specific enzyme II K02783 srlA; glucitol/sorbitol PTS system EIIC component
D STM474_2970 srlA; PTS system, glucitol/sorbitol-specific IIBC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D STM474_3958 beta-lactamase K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_3415 galactitol-specific PTS system component IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_1628 putative phosphotransferase enzyme K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_3957 putative PTS system IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_3416 galactitol-specific PTS system component IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_1625 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_3417 PTS family galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component
D STM474_3956 putative PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D STM474_1626 putative PTS system enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D STM474_4582 ptxA; L-ascorbate-specific enzyme IIA component of PTS K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D STM474_2441 putative sugar phosphotransferase component II A K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D STM474_0909 putative inner membrane protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_4581 sgaB; L-ascorbate-specific enzyme IIB component of PTS K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_2440 putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_0908 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_4580 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_2439 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_2297 fruF; bifunctional fructose-specific PTS IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D STM474_2295 fruA; fructose-specific PTS system IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_3412 putative phosphotransferase system fructose-specific component IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_4037 putative phosphotransferase system fructose-specific component IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_2296 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D STM474_3149 ptsP; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D STM474_3484 ptsO; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) K08485 ptsO; phosphocarrier protein NPr
D STM474_3482 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:seb03070]
D STM474_3340 tolC; outer membrane channel K12340 tolC; outer membrane protein
D STM474_3012 prgI; needle complex major subunit K03221 yscF; type III secretion protein F
D STM474_1412 ssaG; secretion system apparatus SsaG K03221 yscF; type III secretion protein F
D STM474_1400 ssaC; outer membrane secretin precursor K03219 yscC; type III secretion protein C
D STM474_1415 ssaJ; needle complex inner membrane lipoprotein K03222 yscJ; type III secretion protein J
D STM474_1425 ssaR; type III secretion system protein K03226 yscR; type III secretion protein R
D STM474_1426 ssaS; type III secretion system apparatus protein K03227 yscS; type III secretion protein S
D STM474_1427 ssaT; type III secretion system apparatus protein K03228 yscT; type III secretion protein T
D STM474_1428 ssaU; secretion system apparatus protein SsaU K03229 yscU; type III secretion protein U
D STM474_1420 ssaV; secretion system apparatus protein SsaV K03230 yscV; type III secretion protein V
D STM474_3036 inva; Invasion protein invA K03230 yscV; type III secretion protein V
D STM474_1421 ssaN; type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D STM474_1424 ssaQ; type III secretion system protein K03225 yscQ; type III secretion protein Q
D STM474_3030 spaO; surface presentation of antigens protein SpaO K03225 yscQ; type III secretion protein Q
D STM474_p277 pilQ; ATP-binding protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D STM474_p273 pilU; prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D STM474_0426 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D STM474_0427 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D STM474_4332 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D STM474_3451 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D STM474_3585 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D STM474_0425 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D STM474_4020 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D STM474_0142 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D STM474_0141 yacA; SecA regulator SecM K13301 secM; secretion monitor
D STM474_3738 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D STM474_3874 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D STM474_2801 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D STM474_4152 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D STM474_4153 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D STM474_4154 tatC; TatABCE protein translocation system subunit K03118 tatC; sec-independent protein translocase protein TatC
D STM474_0653 tatE; twin arginine translocase protein E K03425 tatE; sec-independent protein translocase protein TatE
D STM474_0301 Rhs-family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D STM474_0288 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D STM474_0291 putative cytoplasmic protein K11903 hcp; type VI secretion system secreted protein Hcp
D STM474_3280 putative cytoplasmic protein K11903 hcp; type VI secretion system secreted protein Hcp
D STM474_0292 putative outer membrane lipoprotein K11906 vasD; type VI secretion system protein VasD
D STM474_0297 sciS; SciS protein K11891 impL; type VI secretion system protein ImpL
D STM474_0294 Putative outer membrane protein, OmpA family K11892 impK; type VI secretion system protein ImpK
D STM474_0283 putative chaperone ATPase K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:seb02020]
D STM474_0416 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D STM474_0415 phoB; transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D STM474_4036 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D STM474_1228 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D STM474_1229 phoP; DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D STM474_p1109 rck; resistance to complement killing K07804 pagC; putatice virulence related protein PagC
D STM474_1244 pagC; virulence membrane protein PagC K07804 pagC; putatice virulence related protein PagC
D STM474_1888 pagO; integral membrane protein K07790 pagO; putative membrane protein PagO
D STM474_1242 pagD; virulence protein PAGD precursor K07805 pagD; putative membrane protein PagD
D STM474_2693 PagK-like protein K07801 pagK; PhoPQ-activated protein
D STM474_1894 pagK; PagK K07801 pagK; PhoPQ-activated protein
D STM474_2494 pgtE; outer membrane protease K08477 pgtE; outer membrane protease E [EC:3.4.21.-]
D STM474_4514 phoN; non-specific acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D STM474_3668 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D STM474_3669 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D STM474_2364 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C
D STM474_0985 ompF; outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D STM474_4240 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D STM474_4241 cpxR; DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D STM474_3381 yqjB; putative exported protein K25864 mzrA; modulator protein MzrA
D STM474_1478 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D STM474_1482 rstA; DNA-binding transcriptional regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D STM474_0218 htrA; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D STM474_4795 creC; sensor protein CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D STM474_4794 creB; DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D STM474_2217 baeS; signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D STM474_2218 baeR; DNA-binding transcriptional regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D STM474_2213 multidrug efflux system subunit MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D STM474_2214 yegN; multidrug efflux system subunit MdtB K07788 mdtB; multidrug efflux pump
D STM474_2215 yegO; multidrug efflux system subunit MdtC K07789 mdtC; multidrug efflux pump
D STM474_2216 yegB; multidrug efflux system protein MdtE K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D STM474_2584 acrD; aminoglycoside/multidrug efflux system K18324 acrD; multidrug efflux pump
D STM474_4487 basS; sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D STM474_4488 basR; DNA-binding transcriptional regulator BasR K07771 basR; two-component system, OmpR family, response regulator BasR
D STM474_2393 yfbE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D STM474_3331 ygiY; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D STM474_3330 ygiX; DNA-binding transcriptional regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D STM474_1958 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D STM474_1957 flhC; transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D STM474_1990 fliC; flagellin K02406 fliC; flagellin
D STM474_2906 fljB; flagellin K02406 fliC; flagellin
D STM474_1987 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D STM474_1956 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D STM474_0725 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D STM474_0724 kdpE; DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D STM474_0728 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D STM474_0727 kdpB; potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D STM474_0726 kdpC; potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D STM474_0729 potassium-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit
D STM474_4003 torS; hybrid sensory histidine kinase TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D STM474_4001 torR; DNA-binding transcriptional regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D STM474_4000 torC; trimethylamine N-oxide reductase cytochrome c-like subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D STM474_3999 torA; trimethylamine N-oxide reductase subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D STM474_3998 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D STM474_3488 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D STM474_4804 arcA; two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D STM474_2918 tctE; tricarboxylic transport: regulatory protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D STM474_2919 tctD; regulatory protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D STM474_2922 tricarboxylic transport K07793 tctA; putative tricarboxylic transport membrane protein
D STM474_2921 tricarboxylic transport K07794 tctB; putative tricarboxylic transport membrane protein
D STM474_2920 tricarboxylic transport K07795 tctC; putative tricarboxylic transport membrane protein
D STM474_4016 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D STM474_1612 pcgL; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D STM474_2912 iroN; outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor
D STM474_0605 fepA; ferrienterobactin receptor K19611 fepA; ferric enterobactin receptor
D STM474_0056 sensor kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D STM474_0646 dpiB; sensory histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D STM474_0055 putative transcriptional regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D STM474_0647 dpiA; two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D STM474_0061 citC2; putative citrate lyase synthetase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D STM474_0645 citC; citrate lyase synthetase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D STM474_0062 citD2; citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D STM474_0644 citD; citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D STM474_0063 cite; Citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D STM474_0643 citE; citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D STM474_0064 citF2; putative citrate lyase alpha chain/citrate-ACP transferase K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D STM474_0642 citF; citrate lyase alpha chain/citrate-ACP transferase K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D STM474_0065 citX2; putative cytoplasmic protein K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D STM474_0641 citx; Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D STM474_0066 citG; CitG protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D STM474_0640 citG; triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D STM474_0639 citT; citrate/succinate transport antiport protein K09477 citT; citrate:succinate antiporter
D STM474_4500 dcuS; sensory histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D STM474_4499 dcuR; DNA-binding transcriptional activator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR
D STM474_3767 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D STM474_4497 dcuB; anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D STM474_1579 sfcA; malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D STM474_1783 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D STM474_1784 narL; transcriptional regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D STM474_2583 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D STM474_2342 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D STM474_1590 narZ; nitrate reductase 2 alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1781 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1591 narY; nitrate reductase 2 beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1780 narH; nitrate reductase 1 beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1593 narV; nitrate reductase 2 gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1778 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1592 narW; nitrate reductase 2 delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D STM474_1779 narJ; nitrate reductase 1 delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D STM474_1583 fdnG; formate dehydorgenase-N alpha subunit K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D STM474_1582 fdnH; formate dehydrogenase-N beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D STM474_1581 fdnI; formate dehydrogenase-N subunit gamma K08350 fdnI; formate dehydrogenase-N, gamma subunit
D STM474_4540 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D STM474_4539 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D STM474_4538 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D STM474_4537 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D STM474_2287 putative regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D STM474_3962 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D STM474_3963 uhpB; sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D STM474_3964 uhpA; DNA-binding transcriptional activator UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D STM474_3961 uhpT; sugar phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D STM474_0253 rcsF; outer membrane lipoprotein K06080 rcsF; RcsF protein
D STM474_2367 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D STM474_2365 yojN; phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D STM474_2014 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D STM474_2366 rcsB; transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D STM474_3103 barA; hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D STM474_1979 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D STM474_1981 sdiA; DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D STM474_2964 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D STM474_0570 fimZ; transcriptional regulator FimZ K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D STM474_0566 fimC; chaperone protein FimC K07346 fimC; fimbrial chaperone protein
D STM474_3811 lpfB; long polar fimbrial chaperone precursor K07346 fimC; fimbrial chaperone protein
D STM474_2237 stcC; putative outer membrane protein K07347 fimD; outer membrane usher protein
D STM474_4799 sthB; outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D STM474_0024 bcfC; fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_0184 stiC; putativie fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_3810 lpfC; long polar fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D STM474_0353 stbC; outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D STM474_0567 fimD; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
D STM474_0315 safC; putative fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_0223 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D STM474_2666 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D STM474_4184 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D STM474_4183 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D STM474_4185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D STM474_4359 zraS; sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D STM474_4360 zraR; transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG
D STM474_4358 zraP; zinc resistance protein K07803 zraP; zinc resistance-associated protein
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_2497 pgtC; phosphoglycerate transporter K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D STM474_2496 pgtB; phosphoglycerate transport system sensor protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D STM474_2495 pgtA; activator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D STM474_2498 pgtP; transporter K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D STM474_3783 dctA; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D STM474_3480 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D STM474_2669 yfhK; putative sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D STM474_2667 yfhA; putative transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D STM474_1806 mbhs; Hydrogenase-1 small chain K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D STM474_1549 putative hydrogenase-1 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D STM474_3300 hypO; hydrogenase 2 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D STM474_1807 hydrogenase 1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D STM474_1548 putative hydrogenase-1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D STM474_3297 hybC; hydrogenase-2, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D STM474_1808 hydrogenase 1 b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D STM474_1547 putative Ni/Fe hydrogenase 1 b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D STM474_1951 cheR; chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D STM474_3744 tcp; methyl-accepting transmembrane citrate/phenol chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein
D STM474_3303 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D STM474_4737 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D STM474_1952 cheM; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D STM474_3370 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D STM474_1638 trg; methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D STM474_3371 aer; aerotaxis sensor receptor K03776 aer; aerotaxis receptor
D STM474_1953 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D STM474_1954 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D STM474_1949 cheY; chemotaxis regulatory protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D STM474_1950 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D STM474_2410 putative chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D STM474_1391 ttrS; sensory histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D STM474_1392 ttrR; response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D STM474_1388 ttrA; tetrathionate reductase complex subunit A K08357 ttrA; tetrathionate reductase subunit A
D STM474_1390 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D STM474_1389 ttrC; tetrathionate reductase complex subunit C K08359 ttrC; tetrathionate reductase subunit C
D STM474_1398 ssrA; sensor kinase K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D STM474_1397 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D STM474_0683 gltL; glutamate/aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D STM474_0684 gltK; glutamate/aspartate transporter K10002 gltK; glutamate/aspartate transport system permease protein
D STM474_0685 gltJ; glutamate/aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D STM474_0686 gltI; glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D STM474_3633 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D STM474_1536 yneH; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D STM474_1812 cytochrome D ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D STM474_0374 cytochrome BD2 subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D STM474_0765 cydA; cytochrome d terminal oxidase polypeptide subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D STM474_1813 putative cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D STM474_0375 hypothetical protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D STM474_0766 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D STM474_0767 ybgT; Cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D STM474_1814 putative periplasmic protein K22501 appX; cytochrome bd-II ubiquinol oxidase subunit AppX [EC:7.1.1.7]
D STM474_3340 tolC; outer membrane channel K12340 tolC; outer membrane protein
D STM474_2203 wza; putative outer membrane polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D STM474_2202 wzb; tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D STM474_2201 wzc; tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D STM474_4098 wecB; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D STM474_4099 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D STM474_0811 ybhC; putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D STM474_1168 flgM; anti-sigma28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D STM474_3262 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D STM474_0722 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:seb02024]
D STM474_2955 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D STM474_4558 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D STM474_1740 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D STM474_2783 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D STM474_1351 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D STM474_0785 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D STM474_3331 ygiY; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D STM474_3330 ygiX; DNA-binding transcriptional regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D STM474_2669 yfhK; putative sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D STM474_2667 yfhA; putative transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D STM474_1958 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D STM474_1957 flhC; transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D STM474_0724 kdpE; DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D STM474_1981 sdiA; DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D STM474_2457 putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D STM474_4259 yneA; putative sugar transport protein K10555 lsrB; AI-2 transport system substrate-binding protein
D STM474_4257 ydeY; putative sugar transport protein K10556 lsrC; AI-2 transport system permease protein
D STM474_4258 ydeZ; putative ABC transporter, membrane component K10557 lsrD; AI-2 transport system permease protein
D STM474_4256 ego; putative ABC-type aldose transport system ATPase component K10558 lsrA; AI-2 transport system ATP-binding protein
D STM474_4254 lsrk; Autoinducer 2 kinase lsrK K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D STM474_4255 ydeW; putative transcriptional repressor K11531 lsrR; lsr operon transcriptional repressor
D STM474_4260 yneB; aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D STM474_4261 lsrg; Autoinducer 2-degrading protein lsrG K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D STM474_3731 livK; leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D STM474_3734 livJ; Leu/Ile/Val/Thr-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D STM474_3730 livH; branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein
D STM474_3729 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D STM474_3728 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D STM474_3727 livF; leucine/isoleucine/valine transporter ATP-binding subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D STM474_2014 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D STM474_1717 yciR; RNase II stability modulator K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
D STM474_2812 VCBS repeat-containing protein K20276 bapA; large repetitive protein
D STM474_1840 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D STM474_3633 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D STM474_4435 zur; zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D STM474_1726 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D STM474_0436 ribd; Riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D STM474_3716 putative inner membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D STM474_1604 ydcZ; putative inner membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D STM474_0364 Putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D STM474_1764 oppa; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D STM474_1692 mppA; periplasmic murein tripeptide transport protein K15580 oppA; oligopeptide transport system substrate-binding protein
D STM474_1763 oppB; oligopeptide permease ABC transporter membrane component K15581 oppB; oligopeptide transport system permease protein
D STM474_1762 oppC; oligopeptide transport protein K15582 oppC; oligopeptide transport system permease protein
D STM474_1761 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D STM474_1760 oppF; oligopeptide transport protein K10823 oppF; oligopeptide transport system ATP-binding protein
D STM474_1255 putative ABC transporter periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D STM474_1256 putative inner membrane transport protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D STM474_1257 putative inner membrane transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D STM474_1258 putative ABC-type transport system ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D STM474_1259 putative ABC-type transport system ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D STM474_4020 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D STM474_4332 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D STM474_3451 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D STM474_3585 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D STM474_0425 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D STM474_0142 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D STM474_3738 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D STM474_3874 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D STM474_2801 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:seb02030]
D STM474_3744 tcp; methyl-accepting transmembrane citrate/phenol chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein
D STM474_3303 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D STM474_4737 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D STM474_1952 cheM; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D STM474_3370 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D STM474_1638 trg; methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D STM474_3371 aer; aerotaxis sensor receptor K03776 aer; aerotaxis receptor
D STM474_4423 malE; maltose ABC transporter periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D STM474_4063 rbsB; D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D STM474_2279 mglB; galactose transport protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D STM474_3802 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D STM474_1954 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D STM474_1953 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D STM474_1949 cheY; chemotaxis regulatory protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D STM474_1948 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D STM474_1950 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D STM474_2410 putative chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D STM474_1951 cheR; chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D STM474_2002 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D STM474_2008 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D STM474_2009 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D STM474_1956 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D STM474_1955 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:seb02040]
D STM474_1999 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D STM474_2001 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D STM474_2002 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D STM474_2003 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D STM474_2004 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D STM474_2005 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D STM474_2006 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D STM474_2007 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D STM474_2008 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D STM474_2009 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D STM474_2010 fliO; flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D STM474_2011 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D STM474_2012 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D STM474_2013 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D STM474_1945 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE
D STM474_1946 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D STM474_1947 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D STM474_1169 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D STM474_1170 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D STM474_1171 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D STM474_1172 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D STM474_1173 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D STM474_1174 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D STM474_1175 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D STM474_1176 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D STM474_1177 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D STM474_1178 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D STM474_1179 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D STM474_1180 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D STM474_1990 fliC; flagellin K02406 fliC; flagellin
D STM474_2906 fljB; flagellin K02406 fliC; flagellin
D STM474_1992 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D STM474_1993 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D STM474_1994 fliT; flagellar biosynthesis protein FliT K02423 fliT; flagellar protein FliT
D STM474_1956 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D STM474_1955 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D STM474_1168 flgM; anti-sigma28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D STM474_1167 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D STM474_1985 fliY; cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein
D STM474_1986 fliZ; flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D STM474_3365 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D STM474_1958 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D STM474_1957 flhC; transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D STM474_3480 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D STM474_1987 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D STM474_3096 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D STM474_4378 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection [PATH:seb05132]
D STM474_1083 sopB; secreted effector protein K13085 ipgD; phosphatidylinositol-4,5-bisphosphate 4-phosphatase [EC:3.1.3.78]
D STM474_1221 sifA; secreted effector protein K15347 sifA; secreted effector protein SifA
D STM474_0958 SopD-like protein K23936 sopD2; secreted effector protein SopD2
D STM474_2914 pipB2; effector protein pipB2 K15352 pipB2; secreted effector protein PipB2
D STM474_1410 sseF; secreted effector protein K15350 sseF; secreted effector protein SseF
D STM474_1411 sseG; secreted effector protein K15351 sseG; secreted effector protein SseG
D STM474_1643 sseJ; secreted effector protein K15349 sseJ; secreted effector protein SseJ
D STM474_2336 sspH2; leucine-rich repeat-containing protein K15353 sspH2; E3 ubiquitin-protein ligase SspH2
D STM474_1043 sseI; secreted effector protein K15354 sseI; secreted effector protein SseI
D STM474_p1077 spvB; virulence protein K15366 spvB; salmonella plasmid virulence protein B
D STM474_3023 sipC; translocation machinery component K13286 sipC; invasin C
D STM474_3021 sipA; secreted effector protein K13284 sipA; invasin A
D STM474_2826 invasion-associated secreted protein K13741 sopE; guanine nucleotide exchange factor SopE
D STM474_1879 sopE2; type III-secreted effector protein K13741 sopE; guanine nucleotide exchange factor SopE
D STM474_3017 sptP; protein tyrosine phosphatase/GTPase activating protein K13740 sptP; secreted effector protein SptP
D STM474_1990 fliC; flagellin K02406 fliC; flagellin
D STM474_2906 fljB; flagellin K02406 fliC; flagellin
D STM474_0507 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
D STM474_p1080 spvD; virulence protein K19557 spvD; salmonella plasmid virulence protein D
D STM474_1017 PipA protein K23941 pipA; PipA/GogA/GtgA family effector protease
D STM474_1079 pipA; pathogenicity island-encoded protein A K23941 pipA; PipA/GogA/GtgA family effector protease
D STM474_2723 putative bacteriophage encoded virulence protein K23941 pipA; PipA/GogA/GtgA family effector protease
D STM474_2689 gogB; leucine-rich repeat-containing protein K23942 gogB; Gifsy-1 prophage leucine-rich repeat protein
D STM474_3004 avrA; AvrA K08598 yopJ; YopJ protease family
D STM474_2383 sseL; deubiquitinase K18015 elaD; deubiquitinase [EC:3.4.22.-]
D STM474_p1078 spvC; SpvC K13450 ospF; phosphothreonine lyase [EC:4.2.3.-]
D STM474_1294 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D STM474_2032 hypothetical protein K23943 sseK3; type III secretion system effector arginine glycosyltransferase
D STM474_4343 NleB protein K23944 sseK1; type III secretion system effector arginine glycosyltransferase
D STM474_2223 putative cytoplasmic protein K23945 sseK2; type III secretion system effector
D STM474_0825 slrP; leucine-rich repeat-containing protein K23946 slrP; E3 ubiquitin-protein ligase SlrP [EC:2.3.2.27]
D STM474_4093 trxA; thioredoxin K03671 TXN; thioredoxin
D STM474_3011 prgJ; needle complex minor subunit K22487 prgJ; type III secretion system protein
D STM474_3012 prgI; needle complex major subunit K03221 yscF; type III secretion protein F
D STM474_1412 ssaG; secretion system apparatus SsaG K03221 yscF; type III secretion protein F
D STM474_3024 sipB; cell invasion protein K13285 sipB; invasin B
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells [PATH:seb05100]
D STM474_2619 sinH; intimin-like protein K13735 yeeJ; adhesin/invasin
D STM474_3022 sipD; translocation machinery component K13287 sipD; invasin D
D STM474_3023 sipC; translocation machinery component K13286 sipC; invasin C
D STM474_3024 sipB; cell invasion protein K13285 sipB; invasin B
D STM474_3087 sopD; Sop effector protein SopD K13739 sopD; secreted effector protein SopD
D STM474_3021 sipA; secreted effector protein K13284 sipA; invasin A
D STM474_3017 sptP; protein tyrosine phosphatase/GTPase activating protein K13740 sptP; secreted effector protein SptP
D STM474_2826 invasion-associated secreted protein K13741 sopE; guanine nucleotide exchange factor SopE
D STM474_1879 sopE2; type III-secreted effector protein K13741 sopE; guanine nucleotide exchange factor SopE
D STM474_1083 sopB; secreted effector protein K13085 ipgD; phosphatidylinositol-4,5-bisphosphate 4-phosphatase [EC:3.1.3.78]
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:seb01501]
D STM474_0985 ompF; outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D STM474_2364 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C
D STM474_0465 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D STM474_1206 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D STM474_1764 oppa; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D STM474_1692 mppA; periplasmic murein tripeptide transport protein K15580 oppA; oligopeptide transport system substrate-binding protein
D STM474_1763 oppB; oligopeptide permease ABC transporter membrane component K15581 oppB; oligopeptide transport system permease protein
D STM474_1762 oppC; oligopeptide transport protein K15582 oppC; oligopeptide transport system permease protein
D STM474_1761 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D STM474_1760 oppF; oligopeptide transport protein K10823 oppF; oligopeptide transport system ATP-binding protein
D STM474_0496 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D STM474_0495 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump
D STM474_0364 Putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D STM474_3340 tolC; outer membrane channel K12340 tolC; outer membrane protein
D STM474_3660 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D STM474_1943 putative penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D STM474_0661 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D STM474_0128 ftsI; penicillin-binding protein 3 precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D STM474_1858 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D STM474_3911 putative Zn-dependent hydrolase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:seb01502]
D STM474_1612 pcgL; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D STM474_0136 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D STM474_0395 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D STM474_1823 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D STM474_4441 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D STM474_0130 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D STM474_0131 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D STM474_0134 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:seb01503]
D STM474_1228 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D STM474_1229 phoP; DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D STM474_3807 yhjW; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D STM474_0649 pagP; palmitoyl transferase for Lipid A K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D STM474_2393 yfbE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D STM474_2394 pmrF; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D STM474_2395 yfbG; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D STM474_2396 putative cytoplasmic protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D STM474_2397 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D STM474_2398 putative inner membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D STM474_2399 hypothetical protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D STM474_2400 pmrD; polymyxin resistance protein B K19238 pmrD; signal transduction protein PmrD
D STM474_4487 basS; sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D STM474_4488 basR; DNA-binding transcriptional regulator BasR K07771 basR; two-component system, OmpR family, response regulator BasR
D STM474_4489 yjdB; putative cell division protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D STM474_1705 sapA; peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D STM474_1706 sapB; peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D STM474_1707 sapC; peptide transport protein K19228 sapC; cationic peptide transport system permease protein
D STM474_1708 sapD; peptide transport protein K19229 sapD; cationic peptide transport system ATP-binding protein
D STM474_1709 sapF; peptide transport protein K19230 sapF; cationic peptide transport system ATP-binding protein
D STM474_2494 pgtE; outer membrane protease K08477 pgtE; outer membrane protease E [EC:3.4.21.-]
D STM474_0250 cutF; copper homeostasis protein CutF K06079 cutF; copper homeostasis protein (lipoprotein)
D STM474_4240 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D STM474_4241 cpxR; DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D STM474_3137 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_2553 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_4555 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_1212 ycfS; putative periplasmic protein K19236 ycfS; L,D-transpeptidase YcfS
D STM474_0218 htrA; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D STM474_4176 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D STM474_3639 ppia; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D STM474_1530 marA; DNA-binding transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D STM474_0496 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D STM474_0495 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump
D STM474_3340 tolC; outer membrane channel K12340 tolC; outer membrane protein
D STM474_0237 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:seb01000]
C 01001 Protein kinases [BR:seb01001]
D STM474_2201 wzc; tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D STM474_0416 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D STM474_1228 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D STM474_3668 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D STM474_1478 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D STM474_4240 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D STM474_4795 creC; sensor protein CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D STM474_2217 baeS; signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D STM474_4487 basS; sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D STM474_3331 ygiY; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D STM474_0725 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D STM474_4003 torS; hybrid sensory histidine kinase TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D STM474_3488 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D STM474_2918 tctE; tricarboxylic transport: regulatory protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D STM474_1087 copS; copper resistance protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D STM474_1783 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D STM474_2583 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D STM474_3963 uhpB; sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D STM474_2365 yojN; phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D STM474_2367 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D STM474_3103 barA; hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D STM474_0056 sensor kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D STM474_0646 dpiB; sensory histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D STM474_4500 dcuS; sensory histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D STM474_2247 yehU; putative sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D STM474_4184 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D STM474_4359 zraS; sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D STM474_2669 yfhK; putative sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D STM474_2496 pgtB; phosphoglycerate transport system sensor protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D STM474_1954 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D STM474_1391 ttrS; sensory histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D STM474_1398 ssrA; sensor kinase K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
C 01009 Protein phosphatases and associated proteins [BR:seb01009]
D STM474_4244 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D STM474_0507 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
D STM474_4784 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:seb01002]
D STM474_0050 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D STM474_p273 pilU; prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D STM474_3607 hopD; leader peptidase HopD K02506 hofD; leader peptidase HopD [EC:3.4.23.43]
D STM474_2494 pgtE; outer membrane protease K08477 pgtE; outer membrane protease E [EC:3.4.21.-]
D STM474_1809 hyaD; hydrogenase 1 maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D STM474_3296 hybD; hydrogenase 2 maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D STM474_1546 putative hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D STM474_2983 hycI; hydrogenase 3 maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D STM474_2611 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D STM474_2540 yfeJ; glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D STM474_2307 spr; putative outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D STM474_1438 ydhO; putative cell wall-associated hydrolase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D STM474_1347 nlpC; lipoprotein K13695 nlpC; probable lipoprotein NlpC
D STM474_2460 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D STM474_3490 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D STM474_4040 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D STM474_0701 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D STM474_3004 avrA; AvrA K08598 yopJ; YopJ protease family
D STM474_3427 yhbO; putative intracellular proteinase K05520 yhbO; deglycase [EC:3.5.1.124]
D STM474_0453 thij; Protein thiJ K03152 thiJ; protein deglycase [EC:3.5.1.124]
D STM474_2383 sseL; deubiquitinase K18015 elaD; deubiquitinase [EC:3.4.22.-]
D STM474_2100 erfK; protein ErfK/srfK K16291 erfK; L,D-transpeptidase ErfK/SrfK
D STM474_1379 ynhg; putative L,D-transpeptidase YnhG K19234 ynhG; L,D-transpeptidase YnhG
D STM474_0862 ybis; putative L,D-transpeptidase YbiS K19235 ybiS; L,D-transpeptidase YbiS
D STM474_1212 ycfS; putative periplasmic protein K19236 ycfS; L,D-transpeptidase YcfS
D STM474_0981 ycbb; putative L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D STM474_2476 putative inner membrane protein K07052 K07052; CAAX protease family protein
D STM474_1049 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D STM474_3762 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D STM474_1523 dcp; dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D STM474_1612 pcgL; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D STM474_3141 ptr; protease III K01407 ptrA; protease III [EC:3.4.24.55]
D STM474_4675 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D STM474_2640 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D STM474_2586 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D STM474_1224 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D STM474_0331 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D STM474_0548 allC; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D STM474_1922 yeba; Uncharacterized metalloprotease yebA K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D STM474_0224 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D STM474_4162 proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D STM474_3205 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D STM474_3076 iap; alkaline phosphatase isozyme conversion aminopeptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D STM474_4714 iadA; isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D STM474_3455 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D STM474_1624 putative cellulase protein K20609 sgcX; putative aminopeptidase [EC:3.4.11.-]
D STM474_1867 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D STM474_3224 yggG; putative Zn-dependent protease K07387 K07387; metalloprotease [EC:3.4.24.-]
D STM474_0965 ycaL; putative Zn-dependent protease K07387 K07387; metalloprotease [EC:3.4.24.-]
D STM474_2597 yfgC; TPR repeat-containing protein YfgC K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D STM474_0232 yaeL; zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D STM474_2482 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D STM474_1017 PipA protein K23941 pipA; PipA/GogA/GtgA family effector protease
D STM474_1079 pipA; pathogenicity island-encoded protein A K23941 pipA; PipA/GogA/GtgA family effector protease
D STM474_2723 putative bacteriophage encoded virulence protein K23941 pipA; PipA/GogA/GtgA family effector protease
D STM474_2081 yeeI; putative inner membrane protein K09933 mtfA; MtfA peptidase
D STM474_1492 putative secreted protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D STM474_0218 htrA; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D STM474_3508 degQ; serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D STM474_3509 degS; serine endoprotease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D STM474_1911 ptrB; protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D STM474_2147 dacD; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_0889 dacC; D-alanyl-D-alanine carboxypeptidase fraction C K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_0658 dacA; D-alanyl-D-alanine carboxypeptidase fraction A K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_2257 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D STM474_0390 ampH; beta-lactamase K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D STM474_2581 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D STM474_3459 dacB; D-alanyl-D-alanine carboxypeptidase/endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D STM474_0469 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D STM474_0471 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D STM474_4689 putative ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D STM474_1060 lonH; putative protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D STM474_4431 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D STM474_p1053 samA; mutagenesis protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D STM474_2030 umuD; DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D STM474_2323 DNA polymerase V subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D STM474_2687 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D STM474_1385 putative proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D STM474_1868 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D STM474_1299 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D STM474_1733 sohB; putative periplasmic protease K04774 sohB; serine protease SohB [EC:3.4.21.-]
D STM474_4380 pepE; peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D STM474_3691 glpG; intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D STM474_1821 ldcA; L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D STM474_2052 Pro-head protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D STM474_2330 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D STM474_4275 hslV; ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D STM474_0872 ybiK; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D STM474_3718 ggt; gamma-glutamyltranspeptidase periplasmic precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D STM474_2222 yegQ; putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D STM474_1616 ydcP; putative collagenase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D STM474_3433 yhbV; putative protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D STM474_3432 yhbU; putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D STM474_4634 pmba; Protein pmbA K03592 pmbA; PmbA protein
D STM474_3529 tldD; suppresses inhibitory activity of CsrA K03568 tldD; TldD protein
D STM474_2359 eco; ecotin precursor K08276 eco; ecotin
D STM474_2634 putative inner membrane lipoprotein K06894 yfhM; alpha-2-macroglobulin
D STM474_4561 hflC; FtsH protease regulator HflC K04087 hflC; modulator of FtsH protease HflC
D STM474_4560 hflK; FtsH protease regulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:seb01003]
D STM474_3702 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D STM474_3788 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D STM474_3486 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D STM474_2633 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D STM474_0199 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D STM474_3660 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D STM474_2196 wcaE; putative glycosyl transferase K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-]
D STM474_2198 wcaC; glycosyl transferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
D STM474_4107 wecG; putative UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D STM474_4105 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D STM474_4096 rfe; undecaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D STM474_1146 mdoH; glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D STM474_1960 otsA; trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D STM474_2185 wcaL; putative glycosyl transferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:seb01005]
D STM474_0237 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D STM474_0238 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D STM474_0140 lpxc; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D STM474_0235 lpxd; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D STM474_0556 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D STM474_0971 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D STM474_1150 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D STM474_1921 msbb; Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D STM474_4482 lpxO; putative dioxygenase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D STM474_2501 ddg; lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D STM474_2306 yeiU; putative permease K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D STM474_1333 putative outer membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D STM474_3897 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D STM474_2397 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D STM474_2341 putative outer membrane protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D STM474_0649 pagP; palmitoyl transferase for Lipid A K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D STM474_4489 yjdB; putative cell division protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D STM474_3807 yhjW; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D STM474_1789 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D STM474_0974 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D STM474_3476 yrbI; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D STM474_3475 yrbH; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D STM474_3892 rfab; Lipopolysaccharide 1,6-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
D STM474_3885 rfaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D STM474_3884 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D STM474_3895 rfaG; glucosyltransferase I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D STM474_3880 yibD; glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D STM474_3891 rfaI; lipopolysaccharide-alpha-1,3-D-galactosyltransferase K03278 waaI; UDP-D-galactose:(glucosyl)LPS alpha-1,3-D-galactosyltransferase [EC:2.4.1.44]
D STM474_3890 rfaJ; lipopolysaccharide glucosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58]
D STM474_3887 rfaK; putative hexose transferase K03280 waaK; UDP-N-acetylglucosamine:(glucosyl)LPS alpha-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.56]
D STM474_3886 rfaL; O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D STM474_3894 rfaP; lipopolysaccharide core biosynthetic protein K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D STM474_3896 rfaQ; lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D STM474_3889 rfaY; lipopolysaccharide core biosynthesis protein K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D STM474_3888 rfaZ; lipopolysaccharide core biosynthesis protein K12981 waaZ; KDO transferase III [EC:2.4.99.-]
D STM474_4302 yijP; membrane protein YijP K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D STM474_0325 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D STM474_0257 yaeD; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D STM474_3354 rfaE; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D STM474_3883 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D STM474_2170 rfbN; rhamnosyl transferase K12992 rfbN; O-antigen biosynthesis alpha-1,3-rhamnosyltransferase [EC:2.4.1.377]
D STM474_2171 rfbU; mannosyl transferase K25195 rfbU; O-antigen biosynthesis alpha-1,4-mannosyltransferase [EC:2.4.1.378]
D STM474_2172 rfbV; abequosyltransferase K13005 rfbV; O-antigen biosynthesis alpha-1,3-abequosyltransferase [EC:2.4.1.60]
D STM474_1336 rfc; O-antigen polymerase K26859 rfc; O-antigen polymerase [EC:2.4.99.27]
D STM474_4106 wzyE; putative common antigen polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D STM474_2164 wzzB; lipopolysaccharide O-antigen chain length regulator K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D STM474_4397 putative phage glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D STM474_0577 yfdH; putative glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D STM474_2167 rfbP; undecaprenol-phosphate galactosephosphotransferase/O-antigen transferase K00996 rfbP; undecaprenyl-phosphate galactose phosphotransferase [EC:2.7.8.6]
D STM474_4096 rfe; undecaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:seb01011]
D STM474_3467 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D STM474_4321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D STM474_0135 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D STM474_0132 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D STM474_0129 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D STM474_0136 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D STM474_0395 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D STM474_1823 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D STM474_4441 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D STM474_4314 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D STM474_1821 ldcA; L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D STM474_0131 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D STM474_0134 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D STM474_3359 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D STM474_0891 ybjG; putative undecaprenyl-diphosphatase YbjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D STM474_1166 mviN; putative virulence protein K03980 murJ; putative peptidoglycan lipid II flippase
D STM474_3660 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D STM474_0199 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D STM474_2633 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D STM474_1943 putative penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D STM474_0661 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D STM474_0128 ftsI; penicillin-binding protein 3 precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D STM474_1858 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D STM474_2147 dacD; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_0889 dacC; D-alanyl-D-alanine carboxypeptidase fraction C K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_0658 dacA; D-alanyl-D-alanine carboxypeptidase fraction A K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D STM474_3459 dacB; D-alanyl-D-alanine carboxypeptidase/endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D STM474_0390 ampH; beta-lactamase K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D STM474_2581 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D STM474_2257 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D STM474_3486 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D STM474_2100 erfK; protein ErfK/srfK K16291 erfK; L,D-transpeptidase ErfK/SrfK
D STM474_1379 ynhg; putative L,D-transpeptidase YnhG K19234 ynhG; L,D-transpeptidase YnhG
D STM474_0862 ybis; putative L,D-transpeptidase YbiS K19235 ybiS; L,D-transpeptidase YbiS
D STM474_1212 ycfS; putative periplasmic protein K19236 ycfS; L,D-transpeptidase YcfS
D STM474_0981 ycbb; putative L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D STM474_1612 pcgL; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D STM474_2482 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D STM474_1438 ydhO; putative cell wall-associated hydrolase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D STM474_2307 spr; putative outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D STM474_1922 yeba; Uncharacterized metalloprotease yebA K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D STM474_4788 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D STM474_3134 mltA; murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D STM474_2969 mltB; murein hydrolase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D STM474_3260 mltC; murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D STM474_0271 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D STM474_1820 emtA; membrane-bound lytic murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D STM474_2672 yfhD; lytic transglycosylase, catalytic K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D STM474_1196 yceg; UPF0755 protein yceG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D STM474_0659 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D STM474_3137 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_2553 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_4555 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_0918 N-acetylmuramoyl-L-alanine amidase AmiD K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_0154 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_1380 lppB; putative methyl-accepting chemotaxis protein K06078 lpp; murein lipoprotein
D STM474_1381 lppA; major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:seb01004]
D STM474_1191 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D STM474_1190 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D STM474_2477 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D STM474_1194 fabf; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D STM474_1192 fabg; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D STM474_1059 fabA; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D STM474_0236 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D STM474_1714 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D STM474_0527 tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D STM474_0485 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D STM474_1753 yciA; acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D STM474_0475 long-chain acyl-CoA thioesterase III K12500 tesC; thioesterase III [EC:3.1.2.-]
D STM474_4471 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D STM474_0386 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D STM474_1355 ydiD; short-chain-fatty-acid--CoA ligase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D STM474_1840 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D STM474_4429 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D STM474_1189 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D STM474_3361 ygiH; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D STM474_3326 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:seb01008]
D STM474_0617 entB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D STM474_0604 entD; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D STM474_0616 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D STM474_0608 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D STM474_0619 ybdb; Esterase ybdB K24147 entH; proofreading thioesterase EntH
D STM474_4712 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:seb01006]
D STM474_0443 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D STM474_3465 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D STM474_0230 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D STM474_4557 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D STM474_4273 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D STM474_4428 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D STM474_0459 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:seb01007]
D STM474_2516 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D STM474_0707 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D STM474_0194 yadB; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D STM474_1456 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D STM474_4709 trpS2; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D STM474_3648 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D STM474_0558 cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D STM474_1942 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D STM474_2242 metG; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D STM474_0049 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D STM474_4673 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D STM474_0669 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D STM474_3187 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D STM474_1934 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D STM474_0987 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D STM474_2624 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D STM474_3828 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D STM474_3827 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D STM474_0950 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D STM474_0251 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D STM474_1337 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D STM474_2965 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D STM474_1341 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D STM474_1342 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D STM474_0984 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D STM474_3837 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D STM474_2428 yfbQ; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D STM474_2502 yfdZ; aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D STM474_4442 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D STM474_0623 ybdL; putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D STM474_2158 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D STM474_3882 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D STM474_0821 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D STM474_1569 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D STM474_3635 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D STM474_1307 argD; bifunctional succinylornithine transaminase/acetylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D STM474_2927 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D STM474_3372 oat; putrescine--2-oxoglutarate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D STM474_0819 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D STM474_0211 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D STM474_4081 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D STM474_0451 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D STM474_0963 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D STM474_2393 yfbE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D STM474_4103 wecE; TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:seb00194]
D STM474_4043 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D STM474_4044 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D STM474_4045 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D STM474_4046 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D STM474_4047 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D STM474_4048 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D STM474_4049 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D STM474_4050 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D STM474_4051 atpI; F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:seb03000]
D STM474_2023 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D STM474_0107 araC; DNA-binding transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D STM474_1100 hpaA; 4-hydroxyphenylacetate catabolism K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D STM474_4229 rhaR; transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D STM474_4228 rhaS; transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D STM474_1320 celD; DNA-binding transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D STM474_4491 adiY; transcriptional activator K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D STM474_2557 eutR; transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D STM474_4460 soxS; DNA-binding transcriptional regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D STM474_1530 marA; DNA-binding transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D STM474_4792 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D STM474_0601 putative regulatory protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D STM474_0583 putative transcriptional regulator K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D STM474_p1110 srgC; putative bacterial regulatory protein K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D STM474_4493 melR; DNA-binding transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D STM474_1282 yeaM; putative regulatory protein K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D STM474_2121 pocR; transcriptional regulator K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D STM474_3328 putative regulatory protein K13652 K13652; AraC family transcriptional regulator
D STM474_2362 ada; O6-methylguanine-DNA methyltransferase/transcription activator/repressor K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D STM474_3128 gcvA; DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D STM474_4086 ilvY; DNA-binding transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D STM474_4142 metR; trans-activator of metE and metH K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D STM474_0043 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D STM474_4308 oxyR; DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D STM474_3211 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D STM474_0121 leuO; putative HTH-type transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D STM474_3399 tdcA; DNA-binding transcriptional activator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D STM474_0535 ybbS; DNA-binding transcriptional activator AllS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D STM474_1730 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D STM474_3975 dsdC; DNA-binding transcriptional regulator DsdC K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D STM474_0713 putative transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D STM474_0348 putative transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D STM474_p1072 spvR; virulence lysR family regulator K19555 spvR; LysR family transcriptional regulator, spv operon transcriptional activator
D STM474_4713 yjiE; putative DNA-binding transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D STM474_0789 transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D STM474_3528 yhcS; putative DNA-binding transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D STM474_4075 yifA; transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D STM474_0890 deoR; DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D STM474_3968 DeoR family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D STM474_3690 glpR; DNA-binding transcriptional repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D STM474_3419 galactitol utilization operon transcriptional repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D STM474_3125 fucR; DNA-binding transcriptional activator FucR K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D STM474_2975 srlL; DNA-bindng transcriptional repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D STM474_4578 yjfQ; transcriptional repressor UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D STM474_4202 yihW; putative glycerol-3-phosphate regulon repressor K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
D STM474_3834 xylR; xylose operon regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D STM474_2280 galS; DNA-binding transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D STM474_3158 galR; DNA-binding transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D STM474_1567 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D STM474_4065 rbsR; transcriptional repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D STM474_4277 cytR; DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D STM474_0124 fruR; DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D STM474_4652 treR; trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D STM474_1436 purR; DNA-binding transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D STM474_3869 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D STM474_3709 gntR; transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D STM474_4679 idnR; L-idonate regulator K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D STM474_0814 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D STM474_3770 putative regulatory protein K03710 K03710; GntR family transcriptional regulator
D STM474_1826 fadR; fatty acid metabolism regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D STM474_0159 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D STM474_4708 Uxu operon transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D STM474_3865 lldR; DNA-binding transcriptional repressor LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D STM474_4008 dgoR; galactonate operon transcriptional repressor K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D STM474_3500 nanR; transcriptional regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D STM474_2940 putative regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D STM474_1601 yncC; putative DNA-binding transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D STM474_2929 ygaE; DNA-binding transcriptional regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D STM474_1521 ydfH; putative regulatory protein K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D STM474_0497 acrR; DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D STM474_3905 slmA; nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator
D STM474_1116 ycdC; putative transcriptional repressor K09017 rutR; TetR/AcrR family transcriptional regulator
D STM474_1444 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D STM474_3551 envR; DNA-binding transcriptional regulator EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D STM474_1687 putative regulatory protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D STM474_1210 ycfQ; putative transcriptional repressor K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D STM474_4310 yijC; DNA-binding transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D STM474_0845 ybiH; putative DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D STM474_0895 putative regulatory protein K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D STM474_4055 asnC; DNA-binding transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D STM474_0946 lrp; leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D STM474_0480 ybaO; putative transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D STM474_1981 sdiA; DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D STM474_2014 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D STM474_1137 csgD; DNA-binding transcriptional regulator CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D STM474_4752 bglJ; DNA-binding transcriptional activator BglJ K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D STM474_3683 malT; transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D STM474_1531 marR; DNA-binding transcriptional repressor MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D STM474_1451 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D STM474_2951 mprA; transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D STM474_3060 putative transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D STM474_0520 cueR; DNA-binding transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D STM474_4517 putative regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D STM474_3577 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D STM474_4461 soxR; SoxR protein K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D STM474_0368 putative transcriptional regulator K19592 golS; MerR family transcriptional regulator, gold-responsive activator of gol and ges genes
D STM474_2248 yehV; putative transcriptional repressor K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D STM474_1396 transcriptional regulator, MerR family protein K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D STM474_0714 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D STM474_4435 zur; zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D STM474_4377 iclR; acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D STM474_0537 allR; DNA-binding transcriptional repressor AllR K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D STM474_1865 kdgR; putative transcriptional repressor K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D STM474_3839 yiaJ; transcriptional repressor K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D STM474_3633 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D STM474_1673 fnr; Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D STM474_2648 yfhP; DNA-binding transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D STM474_4564 nsrR; transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D STM474_1617 ydcN; putative repressor K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D STM474_0860 manganese transport regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D STM474_1919 yebK; DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D STM474_4322 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D STM474_3547 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D STM474_4789 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D STM474_0382 prpR; prp operon regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D STM474_3466 nlp; DNA-binding transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator
D STM474_2884 putative cytoplasmic protein K07724 ner; Ner family transcriptional regulator
D STM474_0113 sgrR; sugar transport-related sRNA regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D STM474_4786 nadR; nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D STM474_1000 regulatory protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D STM474_4207 putative cytoplasmic protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D STM474_3947 sigma-54 dependent transcription regulator K17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
D STM474_4738 putative transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D STM474_2977 ygaA; anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D STM474_2998 fhlA; formate hydrogenlyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D STM474_0219 cdaR; carbohydrate diacid transcriptional activator CdaR K02647 cdaR; carbohydrate diacid regulator
D STM474_2459 putative regulatory protein K06714 rocR; arginine utilization regulatory protein
D STM474_0804 modE; DNA-binding transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D STM474_3820 yiaG; putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D STM474_3952 putative DNA-binding protein K07726 K07726; putative transcriptional regulator
D STM474_4212 putative regulatory protein K07726 K07726; putative transcriptional regulator
D STM474_3751 nikR; nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D STM474_4283 metJ; transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D STM474_1118 puta; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D STM474_4645 relB; bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D STM474_1640 putative cytoplasmic protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D STM474_3170 yohL; putative cytoplasmic protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D STM474_0467 bolA; transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D STM474_p1055 parB; plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D STM474_p1041 putative ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D STM474_4156 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D STM474_3520 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D STM474_0703 nagC; N-acetylglucosamine operon transcriptional repressor K02565 nagC; N-acetylglucosamine repressor
D STM474_1498 mlc; pts operon transcriptional repressor K15545 mlc; transcriptional regulator of PTS gene
D STM474_3859 mtlR; mannitol repressor protein K02562 mtlR; mannitol operon repressor
D STM474_1696 DNA-binding transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D STM474_2662 cadC; DNA-binding transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon
D STM474_3015 hila; Transcriptional regulator hilA K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D STM474_2593 gcvR; transcriptional repressor of gcv operon K03567 gcvR; glycine cleavage system transcriptional repressor
D STM474_1704 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D STM474_1701 pspC; DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D STM474_4255 ydeW; putative transcriptional repressor K11531 lsrR; lsr operon transcriptional repressor
D STM474_0637 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D STM474_2869 phage DNA binding protein K07733 alpA; prophage regulatory protein
D STM474_3244 yqgE; Protein yqgE K07735 algH; putative transcriptional regulator
D STM474_0071 caiF; DNA-binding transcriptional activator CaiF K08277 caiF; transcriptional activator CaiF
D STM474_0195 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D STM474_0435 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D STM474_0334 crI; DNA-binding transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
D STM474_3689 rtcR; sigma N K14414 rtcR; transcriptional regulatory protein RtcR
D STM474_0125 yabB; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
D STM474_0571 fimY; putative regulatory protein K08088 fimY; fimbrial regulator
C 03021 Transcription machinery [BR:seb03021]
D STM474_3580 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D STM474_4338 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D STM474_4339 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D STM474_3915 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D STM474_3365 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D STM474_3064 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D STM474_2753 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D STM474_3735 rpoH; RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D STM474_3480 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D STM474_1987 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D STM474_0100 hepA; ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D STM474_3445 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D STM474_0438 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D STM474_4333 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D STM474_3502 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D STM474_3501 sspB; ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D STM474_2752 rseA; anti-RNA polymerase sigma factor SigE K03597 rseA; sigma-E factor negative regulatory protein RseA
D STM474_2751 rseB; periplasmic negative regulator of sigmaE K03598 rseB; sigma-E factor negative regulatory protein RseB
D STM474_2750 rseC; SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D STM474_0195 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D STM474_3458 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D STM474_3670 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D STM474_4095 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D STM474_0246 rof; Rho-binding antiterminator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:seb03019]
D STM474_1181 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D STM474_3531 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D STM474_2686 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D STM474_4565 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D STM474_4547 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D STM474_4092 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D STM474_0846 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D STM474_3438 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D STM474_4136 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D STM474_3096 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D STM474_3440 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D STM474_4095 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D STM474_4244 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D STM474_0013 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D STM474_4527 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D STM474_4558 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D STM474_2604 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D STM474_0193 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D STM474_3150 ygdP; dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D STM474_2964 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D STM474_3537 yhdA; regulatory protein CsrD K18765 csrD; RNase E specificity factor CsrD
D STM474_4272 menG; ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A
D STM474_4667 yjgD; hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D STM474_3483 yhbJ; nucleotide-binding protein yhbJ K06958 rapZ; RNase adapter protein RapZ
D STM474_1653 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D STM474_0198 hrpB; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:seb03011]
D STM474_0967 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D STM474_0225 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D STM474_3599 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D STM474_3581 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D STM474_3588 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D STM474_4588 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D STM474_3613 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D STM474_3591 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D STM474_3504 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D STM474_3606 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D STM474_3582 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D STM474_3614 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D STM474_3583 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D STM474_3592 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D STM474_3441 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D STM474_2800 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D STM474_3596 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D STM474_4590 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D STM474_3601 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D STM474_0046 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D STM474_3363 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D STM474_4335 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D STM474_3602 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D STM474_3605 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D STM474_3604 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D STM474_3593 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D STM474_3590 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D STM474_4591 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D STM474_4336 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D STM474_4334 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D STM474_4337 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D STM474_3505 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D STM474_3595 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D STM474_3586 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D STM474_3598 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D STM474_3579 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D STM474_3589 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D STM474_2797 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D STM474_1340 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D STM474_3464 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D STM474_3600 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D STM474_3603 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D STM474_3594 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D STM474_3463 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D STM474_3901 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D STM474_3597 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D STM474_3587 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D STM474_0489 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D STM474_4279 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D STM474_1188 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D STM474_3900 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D STM474_4017 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D STM474_1339 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D STM474_0490 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D STM474_3584 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D STM474_2317 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D STM474_r0264 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4320 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r2769 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4171 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4072 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r3556 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r3558 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4368 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r2772 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4166 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4068 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r3562 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4364 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r0259 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r3559 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4366 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4169 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4318 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r0262 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r2770 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:seb03009]
D STM474_2686 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D STM474_4547 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D STM474_2685 era; GTP-binding protein Era K03595 era; GTPase
D STM474_3461 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D STM474_0195 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D STM474_3445 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D STM474_0438 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D STM474_4333 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D STM474_2315 rsuA; 16S rRNA pseudouridylate synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D STM474_0094 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D STM474_3573 sun; 16S rRNA methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D STM474_4760 rsmc; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D STM474_3739 rsmD; RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D STM474_3242 yggJ; protein YggJ K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D STM474_1873 yebU; ribosomal RNA small subunit methyltransferase F K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D STM474_4052 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D STM474_0126 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D STM474_3420 yraL; putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D STM474_3761 yhiQ; putative methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D STM474_1857 rrmA; 23S rRNA methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D STM474_4566 rlmb; 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D STM474_3456 rrmJ; 23S rRNA methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D STM474_0851 ybiN; putative SAM-dependent methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D STM474_3374 ygjO; putative methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D STM474_0662 ybeA; rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D STM474_1072 yccW; putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D STM474_3764 yhiR; putative cytoplasmic protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D STM474_1053 rlml; Ribosomal RNA large subunit methyltransferase L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D STM474_3126 ygdE; putative RNA 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D STM474_2627 yfgB; radical SAM superfamily protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D STM474_3102 rumA; 23S rRNA 5-methyluridine methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D STM474_0907 rumb; 23S rRNA (uracil-5-)-methyltransferase rumB K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D STM474_0099 rluA; 23S rRNA/tRNA pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D STM474_1736 yciL; 23S rRNA pseudouridylate synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D STM474_1183 rluC; 23S rRNA pseudouridylate synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D STM474_2775 rluD; 23S rRNA pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D STM474_1235 putative RNA pseudouridylate synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D STM474_4383 yjbC; 23S rRNA pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D STM474_2761 yfiF; putative RNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D STM474_4762 rimi; Ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D STM474_1163 rimJ; ribosomal-protein-S5-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D STM474_0900 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D STM474_1623 rimL; ribosomal-protein-L7/L12-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D STM474_2799 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D STM474_0877 hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D STM474_0961 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D STM474_3545 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D STM474_2484 yfcB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D STM474_1227 ycfD; putative cytoplasmic protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D STM474_1181 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D STM474_3531 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D STM474_3245 yqgF; Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D STM474_1668 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D STM474_3438 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D STM474_2756 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D STM474_4546 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D STM474_2621 engA; GTP-binding protein EngA K03977 engA; GTPase
D STM474_4559 hflX; putative GTPase HflX K03665 hflX; GTPase
D STM474_3567 yrdC; putative ribosome maturation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D STM474_3916 spoT; (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D STM474_3443 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D STM474_3446 Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D STM474_0562 ybcj; Uncharacterized protein ybcJ K14761 rlbA; ribosome-associated protein
D STM474_0663 ybeb; Uncharacterized protein ybeB K09710 ybeB; ribosome-associated protein
D STM474_0689 ybeY; putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D STM474_3457 yhbY; RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D STM474_3861 yibl; Uncharacterized protein yibL K14762 yibL; ribosome-associated protein
D STM474_4633 yjgA; YjgA protein K09889 yjgA; ribosome-associated protein
D STM474_1058 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D STM474_3481 yhbH; putative sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D STM474_2778 yfiA; translation inhibitor protein RaiA K05809 raiA; ribosome-associated inhibitor A
D STM474_1577 rpsV; 30S ribosomal subunit S22 K02972 sra; stationary-phase-induced ribosome-associated protein
D STM474_1803 engD; GTP-binding protein EngD K06942 ychF; ribosome-binding ATPase
D STM474_1186 yced; Uncharacterized protein yceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:seb03016]
D STM474_2409 elaC; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D STM474_3358 cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D STM474_3687 rtcB; RtcB protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D STM474_2516 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D STM474_0251 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D STM474_0049 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D STM474_0669 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D STM474_2242 metG; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D STM474_0707 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D STM474_1942 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D STM474_3187 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D STM474_1934 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D STM474_2965 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D STM474_0987 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D STM474_1337 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D STM474_0950 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D STM474_0558 cysS; cysteinyl tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D STM474_4673 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D STM474_2624 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D STM474_1341 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D STM474_1342 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D STM474_1456 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D STM474_4709 trpS2; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D STM474_3648 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D STM474_4205 yihZ; D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D STM474_1202 ycfF; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D STM474_3257 trmb; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D STM474_0252 yaeB; putative regulatory protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D STM474_2467 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D STM474_3442 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D STM474_3068 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D STM474_2647 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D STM474_3567 yrdC; putative ribosome maturation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D STM474_4557 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D STM474_4021 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D STM474_4053 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D STM474_1301 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D STM474_4601 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D STM474_4018 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D STM474_1441 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D STM474_3907 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D STM474_0638 rna; ribonuclease I K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21]
D STM474_1716 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D STM474_1838 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D STM474_0197 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D STM474_4787 yjjK; putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D STM474_3828 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D STM474_3827 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D STM474_0194 yadB; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D STM474_0516 ybak; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D STM474_1285 YbaK/prolyl-tRNA synthetase-associated domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D STM474_2673 yfhC; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D STM474_4437 yjbN; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D STM474_3546 yhdG; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D STM474_2263 yohI; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D STM474_0691 miaB; rRNA modification protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D STM474_1938 yecO; putative SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D STM474_1939 yecP; putative enzyme K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D STM474_0977 smtA; putative metallothionein SmtA K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D STM474_4806 lasT; RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D STM474_4312 trma; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D STM474_2798 trmd; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D STM474_2761 yfiF; putative RNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D STM474_3917 spoU; tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D STM474_2649 putative RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D STM474_3867 yibK; putative tRNA/rRNA methyltransferase YibK K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D STM474_2755 yfiC; putative transferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D STM474_3110 yqcB; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D STM474_0099 rluA; 23S rRNA/tRNA pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D STM474_1232 mnma; tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D STM474_1667 ydaO; C32 tRNA thiolase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D STM474_3745 yhhP; sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D STM474_3615 yheL; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D STM474_3616 yheM; sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D STM474_3617 yheN; sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D STM474_1076 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D STM474_2645 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D STM474_3195 ygfZ; putative global regulator K06980 ygfZ; tRNA-modifying protein YgfZ
D STM474_4668 miaE; hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D STM474_2478 mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D STM474_0423 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D STM474_0476 ybaX; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D STM474_3091 ptpS; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D STM474_3095 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D STM474_3113 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D STM474_4552 yjeS; putative FeS protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D STM474_0534 ybbB; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D STM474_0424 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D STM474_0445 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D STM474_0245 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D STM474_2588 ypfI; putative acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D STM474_1842 yeaz; putative M22 peptidase yeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D STM474_3362 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D STM474_4554 yjeE; putative ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D STM474_3133 ygdL; putative enzyme K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D STM474_4565 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D STM474_3440 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D STM474_3180 plasmid maintenance protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D STM474_p1006 plasmid maintenance protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:seb03012]
D STM474_1721 yciH; translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D STM474_3444 infB; initiation factor IF2-alpha K02519 infB; translation initiation factor IF-2
D STM474_1338 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D STM474_3625 yheS; putative ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D STM474_0226 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D STM474_3610 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D STM474_4331 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D STM474_3612 fusA; elongation factor G K02355 fusA; elongation factor G
D STM474_3854 selB; selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D STM474_1793 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D STM474_0228 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D STM474_1792 hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D STM474_1802 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D STM474_0940 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D STM474_4531 efp; Elongation factor P K02356 efp; elongation factor P
D STM474_2304 yeiP; putative elongation factor K02356 efp; elongation factor P
D STM474_4541 superoxide dismutase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D STM474_4530 yjeK; putative aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D STM474_2480 yfcM; putative cytoplasmic protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D STM474_3188 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D STM474_4764 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D STM474_0330 prfH; peptide chain release factor-like protein K02839 prfH; peptide chain release factor
D STM474_3576 putative cytoplasmic protein K09890 arfA; alternative ribosome-rescue factor
D STM474_0249 yaej; Uncharacterized protein yaeJ K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:seb03110]
D STM474_0932 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D STM474_2773 clpB; protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D STM474_0470 clpX; ATP-dependent protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D STM474_4274 hslU; ATP-dependent protease ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D STM474_0507 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
D STM474_0013 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D STM474_2643 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D STM474_0680 hscC; putative heatshock protein K04045 hscC; molecular chaperone HscC
D STM474_2211 yegD; putative chaperone K04046 yegD; hypothetical chaperone protein
D STM474_4527 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D STM474_0014 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D STM474_1105 cbpA; curved DNA-binding protein CbpA K05516 cbpA; curved DNA-binding protein
D STM474_0098 djlA; Dna-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein
D STM474_2644 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D STM474_3665 hslO; chaperonin HslO K04083 hslO; molecular chaperone Hsp33
D STM474_2805 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D STM474_1251 putative heat shock protein K04080 ibpA; molecular chaperone IbpA
D STM474_3985 ibpA; small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA
D STM474_3984 ibpB; heat shock chaperone IbpB K04081 ibpB; molecular chaperone IbpB
D STM474_3664 yrfH; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D STM474_4526 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D STM474_0218 htrA; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D STM474_3455 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D STM474_4050 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D STM474_0566 fimC; chaperone protein FimC K07346 fimC; fimbrial chaperone protein
D STM474_3811 lpfB; long polar fimbrial chaperone precursor K07346 fimC; fimbrial chaperone protein
D STM474_3874 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D STM474_1312 spy; periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy
D STM474_4242 cpxP; periplasmic repressor CpxP K06006 cpxP; periplasmic protein CpxP/Spy
D STM474_4358 zraP; zinc resistance protein K07803 zraP; zinc resistance-associated protein
D STM474_1574 hdeB; acid-resistance protein K19778 hdeB; acid stress chaperone HdeB
D STM474_2993 hypA; hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D STM474_1541 putative hydrogenase K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D STM474_3294 hybF; hydrogenase nickel incorporation protein HybF K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D STM474_2994 hypB; hydrogenase isoenzyme formation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D STM474_3998 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D STM474_1505 ynfI; twin-argninine leader-binding protein DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D STM474_4504 putative anaerobic dehydrogenase component K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D STM474_0630 putative anaerobic dehydrogenase component K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D STM474_3639 ppia; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D STM474_0557 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D STM474_0473 ppid; Peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D STM474_3619 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D STM474_4594 fklB; peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D STM474_0051 slpA; FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D STM474_3621 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D STM474_4088 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D STM474_0096 surA; peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D STM474_4093 trxA; thioredoxin K03671 TXN; thioredoxin
D STM474_2762 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D STM474_0525 ybbN; thioredoxin domain protein K05838 ybbN; putative thioredoxin
D STM474_0898 grxA; glutaredoxin 1 K03674 grxA; glutaredoxin 1
D STM474_1161 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D STM474_3875 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D STM474_1440 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D STM474_4176 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D STM474_1828 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D STM474_3190 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D STM474_4520 dipZ; thiol:disulfide interchange protein precursor K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D STM474_3990 ccmG; heme lyase disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D STM474_2344 ccmG; heme lyase disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D STM474_0627 dsbG; disulfide isomerase/thiol-disulfide oxidase K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:seb04131]
D STM474_2628 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D STM474_1294 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D STM474_0797 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D STM474_1382 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D STM474_1920 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D STM474_0507 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:seb04121]
C 03051 Proteasome [BR:seb03051]
D STM474_0507 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:seb03032]
D STM474_0274 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D STM474_2023 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D STM474_4356 hupA; transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D STM474_0472 hupB; transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta
D STM474_1343 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D STM474_0968 infB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D STM474_4016 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D STM474_4440 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D STM474_4747 dnaC; DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D STM474_3364 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D STM474_4450 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p1043 ssbB; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p228 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D STM474_0240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D STM474_4015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D STM474_4674 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D STM474_0667 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D STM474_1198 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D STM474_0275 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_p204 yacC; YacC protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_0504 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D STM474_4761 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D STM474_1908 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_p1044 putative inner membrane protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_0239 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D STM474_4178 yjcD; putative xanthine/uracil permeases family protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_2529 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_1477 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D STM474_2855 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STM474_3651 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STM474_0718 seqa; Protein seqA K03645 seqA; negative modulator of initiation of replication
D STM474_2599 yfgE; DNA replication initiation factor K10763 hda; DnaA-homolog protein
D STM474_2368 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D STM474_4013 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D STM474_3327 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D STM474_3335 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D STM474_1731 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D STM474_1302 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:seb03036]
D STM474_2023 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D STM474_2686 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D STM474_1768 hns; global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS
D STM474_2935 DNA binding protein, nucleoid-associated K11685 stpA; DNA-binding protein StpA
D STM474_4356 hupA; transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D STM474_0472 hupB; transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta
D STM474_1343 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D STM474_0968 infB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D STM474_1105 cbpA; curved DNA-binding protein CbpA K05516 cbpA; curved DNA-binding protein
D STM474_1104 cbpM; chaperone-modulator protein CbpM K18997 cbpM; chaperone modulatory protein CbpM
D STM474_4792 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D STM474_4016 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D STM474_3423 yraO; DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein
D STM474_1071 yccV; hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D STM474_0856 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D STM474_3547 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D STM474_4558 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D STM474_3211 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D STM474_0946 lrp; leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D STM474_2319 yejK; nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D STM474_0980 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB
D STM474_0979 mukE; condesin subunit E K03804 mukE; chromosome partition protein MukE
D STM474_0978 mukF; condesin subunit F K03633 mukF; chromosome partition protein MukF
D STM474_0138 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D STM474_3071 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D STM474_3737 ftsE; cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D STM474_0128 ftsI; penicillin-binding protein 3 precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D STM474_1858 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D STM474_0947 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D STM474_0127 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D STM474_4276 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN
D STM474_0137 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D STM474_0133 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D STM474_3736 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D STM474_0139 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D STM474_2530 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D STM474_3207 ygfE; Z-ring-associated protein K09888 zapA; cell division protein ZapA
D STM474_4270 yiiU; putative cytoplasmic protein K09892 zapB; cell division protein ZapB
D STM474_1051 ycbW; putative cytoplasmic protein K18657 zapC; cell division protein ZapC
D STM474_0146 yacf; UPF0289 protein yacF K18778 zapD; cell division protein ZapD
D STM474_3506 yhcM; putative ATPase K06916 zapE; cell division protein ZapE
D STM474_4593 ytfB; putative cell envelope opacity-associated protein A K07269 ytfB; cell division protein YtfB
D STM474_3137 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_2553 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_4555 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D STM474_0496 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D STM474_1835 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D STM474_1836 minD; cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D STM474_1837 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D STM474_1063 sulA; SOS cell division inhibitor K13053 sulA; cell division inhibitor SulA
D STM474_3905 slmA; nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator
D STM474_0718 seqa; Protein seqA K03645 seqA; negative modulator of initiation of replication
D STM474_3535 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D STM474_3534 mreC; cell wall structural complex MreBCD transmembrane component MreC K03570 mreC; rod shape-determining protein MreC
D STM474_3533 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D STM474_0660 mrdB; cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA
D STM474_p216 ParA K03496 parA; chromosome partitioning protein
D STM474_p1056 parA; plasmid partition protein A K03496 parA; chromosome partitioning protein
D STM474_p1055 parB; plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D STM474_p1041 putative ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D STM474_3327 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D STM474_3335 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D STM474_4053 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D STM474_4052 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D STM474_4126 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D STM474_3191 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D STM474_2241 mrp; mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D STM474_3637 fic; cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D STM474_4179 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:seb03400]
D STM474_1672 ogt; O-6-alkylguanine-DNA:cysteine-protein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D STM474_0731 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D STM474_2760 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D STM474_3258 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D STM474_1460 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D STM474_0143 mutT; nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D STM474_3904 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D STM474_2362 ada; O6-methylguanine-DNA methyltransferase/transcription activator/repressor K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D STM474_2361 alkB; DNA repair system protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D STM474_3366 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D STM474_2210 alkA; 3-methyl-adenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D STM474_3814 tag; 3-methyl-adenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D STM474_3899 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D STM474_0751 nei; endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D STM474_1306 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D STM474_2294 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D STM474_4354 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D STM474_3189 recJ; ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_2529 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D STM474_4178 yjcD; putative xanthine/uracil permeases family protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D STM474_4448 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D STM474_0824 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D STM474_1978 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D STM474_1313 nucleotide excision repair endonuclease K05984 cho; excinuclease Cho [EC:3.1.25.-]
D STM474_4128 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D STM474_4338 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D STM474_4339 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D STM474_3580 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D STM474_3915 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D STM474_1213 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D STM474_3049 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D STM474_4556 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D STM474_3152 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D STM474_2152 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D STM474_2613 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D STM474_0444 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D STM474_1910 exoX; exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D STM474_0240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D STM474_4015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D STM474_4674 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D STM474_0667 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D STM474_1198 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D STM474_0275 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_p204 yacC; YacC protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D STM474_0504 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D STM474_4761 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D STM474_1908 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_p1044 putative inner membrane protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D STM474_4450 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p1043 ssbB; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p228 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D STM474_2855 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STM474_3651 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STM474_2022 vsr; DNA mismatch endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D STM474_3140 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D STM474_3142 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D STM474_3139 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D STM474_2967 recA; recombinase A K03553 recA; recombination protein RecA
D STM474_1927 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D STM474_1926 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D STM474_1931 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D STM474_4278 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D STM474_4589 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D STM474_0501 priC; primosomal replication protein N K04067 priC; primosomal replication protein N''
D STM474_4748 dnaI; primosomal protein DnaI K02317 dnaT; DNA replication protein DnaT
D STM474_0412 sbcC; exonuclease subunit SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D STM474_0413 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D STM474_4785 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D STM474_4014 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D STM474_3918 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D STM474_2684 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D STM474_0506 recR; recombination protein RecR K06187 recR; recombination protein RecR
D STM474_2807 recN; recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D STM474_0409 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D STM474_3079 cas1; crispr-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D STM474_2316 yejH; putative helicase K19789 radD; DNA repair protein RadD
D STM474_2368 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D STM474_4013 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D STM474_1731 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D STM474_4356 hupA; transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D STM474_0472 hupB; transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta
D STM474_0995 gifsy-1 prophage RecE K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
D STM474_2745 gifsy-1 prophage RecE K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
D STM474_3547 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D STM474_1343 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D STM474_0968 infB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D STM474_4136 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D STM474_1768 hns; global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS
D STM474_0328 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D STM474_p1054 umuC; mutagenesis protein K03502 umuC; DNA polymerase V
D STM474_2029 umuC; DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V
D STM474_p1053 samA; mutagenesis protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D STM474_2030 umuD; DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D STM474_2323 DNA polymerase V subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D STM474_4431 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D STM474_0101 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D STM474_1158 dinI; DNA damage-inducible protein I, inhibits UmuD processing K12149 dinI; DNA-damage-inducible protein I
D STM474_1008 putative DinI-like DNA damage-inducible protein K12149 dinI; DNA-damage-inducible protein I
D STM474_2733 putative damage-inducible protein K12149 dinI; DNA-damage-inducible protein I
D STM474_2851 Prophage protein K12149 dinI; DNA-damage-inducible protein I
D STM474_2966 recX; recombination regulator RecX K03565 recX; regulatory protein
D STM474_p1058 putative cytoplasmic protein K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
D STM474_3676 putative cytoplasmic protein K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
D STM474_4090 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D STM474_1067 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D STM474_0847 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D STM474_1843 yoaA; putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D STM474_2373 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D STM474_2945 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D STM474_2374 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D STM474_2946 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:seb03029]
D STM474_3444 infB; initiation factor IF2-alpha K02519 infB; translation initiation factor IF-2
D STM474_1338 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D STM474_0226 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D STM474_3610 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D STM474_4331 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D STM474_3612 fusA; elongation factor G K02355 fusA; elongation factor G
D STM474_2685 era; GTP-binding protein Era K03595 era; GTPase
D STM474_1456 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D STM474_0669 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D STM474_1934 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D STM474_1942 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D STM474_1335 putative DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D STM474_4450 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p1043 ssbB; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D STM474_p228 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D STM474_0233 yaeT; outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family
D STM474_0013 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D STM474_2805 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D STM474_4527 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D STM474_4526 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D STM474_0014 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D STM474_2647 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D STM474_2644 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D STM474_1440 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D STM474_2241 mrp; mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D STM474_0459 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D STM474_4020 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D STM474_0507 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:seb02000]
D STM474_0970 msbA; lipid transporter ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D STM474_0481 mdla; Multidrug resistance-like ATP-binding protein mdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D STM474_0482 mdlb; Multidrug resistance-like ATP-binding protein mdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D STM474_2909 iroC; iron transporter: fur regulated K18895 iroC; ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
D STM474_2814 putative ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D STM474_4457 putative ABC-type bacteriocin/lantibiotic exporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D STM474_0943 cydC; cysteine/glutathione ABC transporter membrane/ATP-binding component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D STM474_0944 cydD; cysteine/glutathione ABC transporter membrane/ATP-binding component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D STM474_0929 ybjZ; macrolide transporter ATP-binding/permease protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D STM474_2360 yojI; multidrug transporter membrane component/ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D STM474_1054 uup; ABC transporter ATPase component K15738 uup; ABC transport system ATP-binding/permease protein
D STM474_2547 cysP; thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D STM474_4245 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D STM474_2546 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D STM474_2545 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D STM474_2544 cysA; sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D STM474_0806 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D STM474_3291 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D STM474_0807 modB; molybdate ABC transporter permease protein K02018 modB; molybdate transport system permease protein
D STM474_0808 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D STM474_0803 modf; Putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D STM474_0111 tbpA; thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D STM474_0110 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein
D STM474_0109 thiQ; thiamine transporter ATP-binding subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D STM474_1219 potD; spermidine/putrescine ABC transporter periplasmic substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D STM474_1220 potC; PotC protein K11070 potC; spermidine/putrescine transport system permease protein
D STM474_1222 potB; spermidine/putrescine ABC transporter membrane protein K11071 potB; spermidine/putrescine transport system permease protein
D STM474_1223 potA; putrescine/spermidine ABC transporter ATPase protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D STM474_0902 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein
D STM474_0905 potI; putrescine ABC transporter membrane protein K11074 potI; putrescine transport system permease protein
D STM474_0904 potH; putrescine ABC transporter membrane protein K11075 potH; putrescine transport system permease protein
D STM474_0903 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D STM474_0449 phnS; 2-aminoethylphosphonate transporter K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D STM474_0446 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D STM474_0447 phnU; 2-aminoethylphosphonate transporter K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D STM474_0448 phnT; 2-aminoethylphosphonate transporter K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D STM474_2949 proX; glycine betaine transporter periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D STM474_2948 proW; glycine betaine transporter membrane protein K02001 proW; glycine betaine/proline transport system permease protein
D STM474_2947 proV; glycine betaine transporter ATP-binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D STM474_2253 yehZ; putative transport protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D STM474_1503 putative ABC transporter periplasmic component K05845 opuC; osmoprotectant transport system substrate-binding protein
D STM474_2250 yehW; putative permease transmembrane component K05846 opuBD; osmoprotectant transport system permease protein
D STM474_2252 yehY; putative ABC-type proline/glycine betaine transport system permease component K05846 opuBD; osmoprotectant transport system permease protein
D STM474_1502 putative ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein
D STM474_1504 putative transport system permease component K05846 opuBD; osmoprotectant transport system permease protein
D STM474_2251 yehX; ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D STM474_1501 ABC-type proline/glycine betaine transport system K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D STM474_4423 malE; maltose ABC transporter periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D STM474_4422 malF; maltose transporter membrane protein K10109 malF; maltose/maltodextrin transport system permease protein
D STM474_4421 malG; maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D STM474_4424 malK; maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D STM474_2279 mglB; galactose transport protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D STM474_2277 mglC; beta-methylgalactoside transporter inner membrane component K10541 mglC; methyl-galactoside transport system permease protein
D STM474_2278 mglA; galactose/methyl galaxtoside transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D STM474_4063 rbsB; D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D STM474_4062 rbsC; ribose ABC transporter permease protein K10440 rbsC; ribose transport system permease protein
D STM474_4061 rbsA; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D STM474_3724 ugpB; glycerol-3-phosphate transporter periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D STM474_3723 ugpA; glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D STM474_3722 ugpE; glycerol-3-phosphate transporter membrane protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D STM474_3721 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D STM474_0524 ybbM; putative transport protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D STM474_0523 ybbL; putative ABC transporter ATP-binding protein YbbL K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D STM474_4259 yneA; putative sugar transport protein K10555 lsrB; AI-2 transport system substrate-binding protein
D STM474_4257 ydeY; putative sugar transport protein K10556 lsrC; AI-2 transport system permease protein
D STM474_4258 ydeZ; putative ABC transporter, membrane component K10557 lsrD; AI-2 transport system permease protein
D STM474_4256 ego; putative ABC-type aldose transport system ATPase component K10558 lsrA; AI-2 transport system ATP-binding protein
D STM474_3471 yrbD; putative transport protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D STM474_3472 yrbE; putative transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D STM474_3473 yrbF; putative ABC transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D STM474_3470 yrbC; putative transport protein K07323 mlaC; phospholipid transport system substrate-binding protein
D STM474_3469 anti-sigma factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D STM474_4036 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D STM474_4035 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D STM474_4034 pstA; phosphate transporter permease subunit K02038 pstA; phosphate transport system permease protein
D STM474_4033 pstB; phosphate transporter subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D STM474_2452 argT; lysine/arginine/ornithine transport protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D STM474_2449 hisM; histidine transport system permease K10015 hisM; histidine transport system permease protein
D STM474_2450 hisQ; histidine transport system permease protein K10016 hisQ; histidine transport system permease protein
D STM474_2448 hisP; histidine/lysine/arginine/ornithine transporter subunit K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D STM474_2451 hisJ; histidine ABC transporter ATP-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D STM474_0855 glnH; glutamine ABC transporter periplasmic protein K10036 glnH; glutamine transport system substrate-binding protein
D STM474_0854 glnP; glutamine ABC transporter permease protein K10037 glnP; glutamine transport system permease protein
D STM474_0853 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D STM474_4548 putative arginine-binding periplasmic protein K09996 artJ; arginine transport system substrate-binding protein
D STM474_0911 artJ; arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein
D STM474_0914 artI; arginine-binding periplasmic protein 1precursor K09997 artI; arginine transport system substrate-binding protein
D STM474_0912 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D STM474_0913 artQ; arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein
D STM474_0915 artP; arginine transporter ATP-binding subunit K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D STM474_0686 gltI; glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D STM474_0684 gltK; glutamate/aspartate transporter K10002 gltK; glutamate/aspartate transport system permease protein
D STM474_0685 gltJ; glutamate/aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D STM474_0683 gltL; glutamate/aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D STM474_1985 fliY; cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein
D STM474_1983 yecS; putative ABC transporter membrane protein K10009 tcyB; L-cystine transport system permease protein
D STM474_1982 yecC; putative amino-acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D STM474_3731 livK; leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D STM474_3734 livJ; Leu/Ile/Val/Thr-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D STM474_3730 livH; branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein
D STM474_3729 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D STM474_3728 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D STM474_3727 livF; leucine/isoleucine/valine transporter ATP-binding subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D STM474_0254 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D STM474_0531 sfbA; putative ABC-type transport system ATPase component K02073 metQ; D-methionine transport system substrate-binding protein
D STM474_0255 yaeE; DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein
D STM474_0533 sfbC; ABC transporter integral membrane protein K02072 metI; D-methionine transport system permease protein
D STM474_0256 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D STM474_0532 sfbB; putative ABC-type transport system ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D STM474_1645 putative periplasmic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D STM474_1646 putative ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D STM474_1648 putative ABC-type transport system membrane component K02029 ABC.PA.P; polar amino acid transport system permease protein
D STM474_1647 putative ABC-type polar amino acid transport system ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D STM474_1764 oppa; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D STM474_1692 mppA; periplasmic murein tripeptide transport protein K15580 oppA; oligopeptide transport system substrate-binding protein
D STM474_1763 oppB; oligopeptide permease ABC transporter membrane component K15581 oppB; oligopeptide transport system permease protein
D STM474_1762 oppC; oligopeptide transport protein K15582 oppC; oligopeptide transport system permease protein
D STM474_1761 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D STM474_1760 oppF; oligopeptide transport protein K10823 oppF; oligopeptide transport system ATP-binding protein
D STM474_3802 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D STM474_3801 dppB; dipeptide transporter permease DppB K12369 dppB; dipeptide transport system permease protein
D STM474_3800 dppC; dipeptide transporter K12370 dppC; dipeptide transport system permease protein
D STM474_3799 dppD; dipeptide transporter ATP-binding subunit K12371 dppD; dipeptide transport system ATP-binding protein
D STM474_3798 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein
D STM474_1705 sapA; peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D STM474_1706 sapB; peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D STM474_1707 sapC; peptide transport protein K19228 sapC; cationic peptide transport system permease protein
D STM474_1708 sapD; peptide transport protein K19229 sapD; cationic peptide transport system ATP-binding protein
D STM474_1709 sapF; peptide transport protein K19230 sapF; cationic peptide transport system ATP-binding protein
D STM474_0874 yliB; putative ABC transporter periplasmic binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D STM474_0875 yliC; putative ABC transporter periplasmic binding protein K13890 gsiC; glutathione transport system permease protein
D STM474_0876 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D STM474_0873 yliA; glutathione transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D STM474_1255 putative ABC transporter periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D STM474_1256 putative inner membrane transport protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D STM474_1257 putative inner membrane transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D STM474_1258 putative ABC-type transport system ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D STM474_1259 putative ABC-type transport system ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D STM474_2309 yejA; putative ABC transporter periplasmic binding protein K13893 yejA; microcin C transport system substrate-binding protein
D STM474_2310 yejB; putative binding-protein-dependent transporter K13894 yejB; microcin C transport system permease protein
D STM474_2311 yejE; putative ABC-type dipeptide/oligopeptide/nickel transport system permease component K13895 yejE; microcin C transport system permease protein
D STM474_2312 yejF; putative ABC-type transport system ATPase component K13896 yejF; microcin C transport system ATP-binding protein
D STM474_0202 fhuD; iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D STM474_0203 fhuB; ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D STM474_0201 fhuC; iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D STM474_0614 fepB; iron-enterobactin transporter periplasmic binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D STM474_0612 fepD; iron-enterobactin transporter membrane protein K23186 fepD; iron-siderophore transport system permease protein
D STM474_0611 fepG; iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein
D STM474_0610 fepC; iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D STM474_3292 putative periplasmic ferrichrome-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D STM474_0795 putative ABC transport protein K02015 ABC.FEV.P; iron complex transport system permease protein
D STM474_0796 putative ABC-type cobalamin/Fe3+-siderophore transport component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D STM474_0215 btuF; vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D STM474_1344 btuC; Vitamin B12 transport system permease protein btuC K06073 btuC; vitamin B12 transport system permease protein
D STM474_1346 btuD; vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D STM474_1923 znuA; zinc ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D STM474_1925 znuB; high-affinity zinc transporter membrane component K09816 znuB; zinc transport system permease protein
D STM474_1924 znuC; ABC superfamily high affinity Zn transport protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D STM474_3000 sitA; iron transporter: fur regulated K11604 sitA; manganese/iron transport system substrate-binding protein
D STM474_3002 sitC; putative permease K11605 sitC; manganese/iron transport system permease protein
D STM474_3003 sitD; putative permease K11606 sitD; manganese/iron transport system permease protein
D STM474_3001 sitB; putative ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D STM474_2107 cbiN; cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D STM474_2106 cbiQ; vitamin B12 biosynthetic protein K02008 cbiQ; cobalt/nickel transport system permease protein
D STM474_2108 cbiM; cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D STM474_2105 cbiO; cobalt transporter ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D STM474_3219 signal transduction histidine kinase, LytS K16923 qrtT; energy-coupling factor transport system substrate-specific component
D STM474_3220 putative membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D STM474_3221 putative ABC-type cobalt transport system ATP-binding component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D STM474_3222 cysA; putative ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D STM474_0745 putative ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D STM474_0746 putative ABC-type polysaccharide/polyol phosphate transport system ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D STM474_4677 yjgP; putative permease K07091 lptF; lipopolysaccharide export system permease protein
D STM474_4678 yjgQ; putative permease K11720 lptG; lipopolysaccharide export system permease protein
D STM474_3479 yhbG; putative ABC transporter ATP-binding protein YhbG K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D STM474_0841 ybhR; putative transport protein K25180 ybhR; drug efflux transport system permease protein
D STM474_0842 putative inner membrane protein K25181 ybhS; drug efflux transport system permease protein
D STM474_0843 ybhF; putative ABC-type multidrug transport system ATPase component K25182 ybhF; drug efflux transport system ATP-binding protein
D STM474_0844 ybhG; membrane protein YbhG K25183 ybhG; membrane fusion protein YbhG
D STM474_1214 lolC; outer membrane-specific lipoprotein transporter subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D STM474_1216 lolE; outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D STM474_1215 lolD; lipoprotein transporter ATP-binding subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D STM474_3993 ccmD; heme exporter protein C K02196 ccmD; heme exporter protein D
D STM474_2347 ccmD; heme exporter protein C K02196 ccmD; heme exporter protein D
D STM474_3994 ccmC; heme exporter protein K02195 ccmC; heme exporter protein C
D STM474_2348 ccmC; heme exporter protein K02195 ccmC; heme exporter protein C
D STM474_3995 ccmB; heme exporter protein K02194 ccmB; heme exporter protein B
D STM474_2349 ccmB; heme exporter protein K02194 ccmB; heme exporter protein B
D STM474_3996 ccmA; cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D STM474_2350 ccmA; cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D STM474_3736 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D STM474_3737 ftsE; cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D STM474_0182 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D STM474_3752 yhhJ; putative ABC transport protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D STM474_0181 yadG; putative ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D STM474_0529 ybbP; Putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D STM474_0528 ybbA; putative ABC transporter ATP-binding protein YbbA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D STM474_1375 sufC; cysteine desulfurase ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D STM474_2527 yfeH; putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D STM474_1431 ydhE; multidrug efflux protein K26939 norM; MATE family, multidrug efflux pump
D STM474_2098 Multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump
D STM474_4432 dinF; DNA-damage-inducible SOS response protein K26937 dinF; MATE family, multidrug efflux pump
D STM474_3239 galp; Galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D STM474_3163 araE; L-arabinose isomerase K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D STM474_4615 sugar transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D STM474_4617 sugar transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D STM474_3121 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D STM474_3966 permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D STM474_2299 setB; proton efflux pump K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D STM474_3261 nupG; nucleoside transport K03289 nupG; MFS transporter, NHS family, nucleoside permease
D STM474_2523 xapB; xanthosine permease K11537 xapB; MFS transporter, NHS family, xanthosine permease
D STM474_0710 citA; citrate-proton symporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D STM474_2767 kgtP; alpha-ketoglutarate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D STM474_4486 proP; proline/glycine betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D STM474_2679 major facilitator family transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D STM474_3498 nanT; putative sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D STM474_0370 putative inner membrane protein K08178 JEN; MFS transporter, SHS family, lactate transporter
D STM474_3107 gudT; putative D-glucarate permease K03535 gudP; MFS transporter, ACS family, glucarate transporter
D STM474_3284 hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D STM474_1554 putative transport protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D STM474_4004 dgoT; D-galactonate transport protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D STM474_1099 hpaX; 4-hydroxyphenylacetate catabolism K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D STM474_2386 yfaV; putative transport protein K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D STM474_2268 putative n-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D STM474_1366 ydiM; putative transport protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D STM474_1281 yeaN; inner membrane transport protein YeaN K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D STM474_2658 hcaT; putative 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D STM474_3961 uhpT; sugar phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D STM474_2498 pgtP; transporter K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D STM474_2379 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D STM474_2287 putative regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D STM474_3962 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D STM474_1782 narK; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D STM474_1589 narU; nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D STM474_3156 lplt; Lysophospholipid transporter lplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D STM474_0613 ybdA; enterobactin exporter EntS K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D STM474_0465 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D STM474_2314 bcr; bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D STM474_3973 emrD; multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D STM474_0411 araJ; protein AraJ K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D STM474_1533 ydeA; sugar efflux transporter B K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D STM474_0892 mdfA; multidrug translocase MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D STM474_1149 yceE; drug efflux system protein MdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D STM474_0397 putative permease K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D STM474_1162 yceL; multidrug resistance protein MdtH K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D STM474_4026 yidY; multidrug efflux system protein MdtL K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D STM474_4719 yjiO; putative sugar transport protein K23241 mdtM; MFS transporter, DHA1 family, multidrug resistance protein
D STM474_0268 putative drug efflux protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D STM474_2953 emrB; putative multidrug transport protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D STM474_1587 smvA; methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D STM474_1866 putative membrane transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D STM474_2216 yegB; multidrug efflux system protein MdtE K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D STM474_0514 fsr; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D STM474_1495 putative membrane transport protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D STM474_0954 ycaD; MFS family transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D STM474_3640 tsga; Protein tsgA K06141 tsgA; MFS transporter, TsgA protein
D STM474_0084 yaaU; putative metabolite transport protein YaaU K08368 yaaU; MFS transporter, putative metabolite transport protein
D STM474_2535 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D STM474_3149 ptsP; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D STM474_3413 phosphotransferase system mannitol/fructose-specific IIA component K02784 ptsH; phosphocarrier protein HPr
D STM474_3953 putative PTS system phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D STM474_2534 ptsH; phosphocarrier protein ptsH K02784 ptsH; phosphocarrier protein HPr
D STM474_3484 ptsO; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) K08485 ptsO; phosphocarrier protein NPr
D STM474_4295 ptsA; PEP-protein phosphotransferase K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-]
D STM474_2297 fruF; bifunctional fructose-specific PTS IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D STM474_2536 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D STM474_1200 ptgcb; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D STM474_2893 putative phosphotransferase system IIC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D STM474_0706 nagE; N-acetyl glucosamine specific PTS system components IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D STM474_2675 putative phosphotransferase system IIB component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D STM474_2295 fruA; fructose-specific PTS system IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_3412 putative phosphotransferase system fructose-specific component IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_4037 putative phosphotransferase system fructose-specific component IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D STM474_4297 frwB; putative fructose-like phosphotransferase EIIB subunit 2 K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D STM474_4300 frwD; putative fructose-like phosphotransferase EIIB subunit 3 K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D STM474_4296 frwC; putative fructose-like permease EIIC subunit 2 K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D STM474_3857 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D STM474_1319 celC; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D STM474_1317 celA; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D STM474_1318 celB; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D STM474_2972 slrB; glucitol/sorbitol-specific PTS system component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D STM474_2886 putative glucitol-specific PTS enzyme III K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D STM474_2887 putative glucitol-specific PTS enzyme III K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D STM474_2971 srlE; glucitol/sorbitol-specific enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D STM474_2885 putative PTS system glucitol/sorbitol-specific enzyme II K02783 srlA; glucitol/sorbitol PTS system EIIC component
D STM474_2970 srlA; PTS system, glucitol/sorbitol-specific IIBC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D STM474_3958 beta-lactamase K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_3415 galactitol-specific PTS system component IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_1628 putative phosphotransferase enzyme K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D STM474_3957 putative PTS system IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_3416 galactitol-specific PTS system component IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_1625 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D STM474_3417 PTS family galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component
D STM474_3956 putative PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D STM474_1626 putative PTS system enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D STM474_1852 manX; mannose-specific enzyme IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D STM474_0597 putative PTS system mannose-specific enzyme IIAB K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D STM474_1853 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D STM474_1854 manZ; mannose-specific PTS system protein IID K02796 manZ; mannose PTS system EIID component
D STM474_4739 putative PTS permease K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D STM474_4740 putative PTS permease K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D STM474_0596 putative PTS system mannose-specific enzyme IIAB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D STM474_4741 putative PTS permease K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D STM474_0595 phosphotransferase system PTS, sorbose-specific IIC subunit K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D STM474_0594 putative PTS system mannose-specific enzyme IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D STM474_4742 ptnD; putative PTS permease K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D STM474_3946 PTS system fructose IIA component K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203]
D STM474_3945 putative PTS system protein K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D STM474_3944 putative PTS system protein K17466 dgaC; D-glucosaminate PTS system EIIC component
D STM474_3943 putative PTS system protein K17467 dgaD; D-glucosaminate PTS system EIID component
D STM474_4582 ptxA; L-ascorbate-specific enzyme IIA component of PTS K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D STM474_2441 putative sugar phosphotransferase component II A K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D STM474_0909 putative inner membrane protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_4581 sgaB; L-ascorbate-specific enzyme IIB component of PTS K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_2440 putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D STM474_0908 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_4580 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_2439 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D STM474_3482 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D STM474_4269 glpF; glycerol diffusion K02440 glpF; glycerol uptake facilitator
D STM474_2122 pduF; propanediol diffusion facilitator K27261 pduF; propanediol uptake facilitator
D STM474_1759 putative voltage-gated potassium channel K10716 kch; voltage-gated potassium channel
D STM474_4569 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D STM474_0484 ammonium transporter K03320 amt; ammonium transporter, Amt family
D STM474_1458 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D STM474_4462 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D STM474_0888 yliJ; glutathione s-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D STM474_2445 yfcF; putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D STM474_3502 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D STM474_2411 yfbK; Putative von Willebrand factor, vWF type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D STM474_1077 ycca; Inner membrane protein yccA K19416 yccA; modulator of FtsH protease
D STM474_0960 focA; formate transporter K06212 focA; formate transporter
D STM474_3643 nirC; nitrite transporter NirC K02598 nirC; nitrite transporter
D STM474_3575 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D STM474_0498 aefA; potassium efflux protein KefA K05802 mscK; potassium-dependent mechanosensitive channel
D STM474_4544 mechanosensitive ion channel family protein K22051 mscM; miniconductance mechanosensitive channel
D STM474_3214 yggB; mechanosensitive channel MscS K03442 mscS; small conductance mechanosensitive channel
D STM474_0852 ybio; Uncharacterized mscS family protein ybiO K22044 ybiO; moderate conductance mechanosensitive channel
D STM474_1676 ynaI; putative integral membrane protein K16052 ynaI; MscS family membrane protein
D STM474_0589 ybdg; Uncharacterized protein ybdG K16053 ybdG; miniconductance mechanosensitive channel
D STM474_1956 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D STM474_1955 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D STM474_3310 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D STM474_3309 exbD; biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D STM474_0770 tolQ; colicin uptake protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D STM474_0771 tolR; colicin uptake protein TolR K03560 tolR; biopolymer transport protein TolR
D STM474_4129 corA; magnesium/nickel/cobalt transporter CorA K03284 corA; magnesium transporter
D STM474_1669 zntB; zinc transporter K16074 zntB; zinc transporter
D STM474_0651 crcB; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D STM474_1538 putative inner membrane protein K08994 yneE; ion channel-forming bestrophin family protein
D STM474_4604 ytfL; putative hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D STM474_2803 CBS/transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D STM474_0985 ompF; outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D STM474_0335 phoE; outer membrane phosphoporin protein E K11929 phoE; outer membrane pore protein E
D STM474_2364 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C
D STM474_1585 nmpC; putative outer membrane porin precursor K16076 nmpC; outer membrane porin protein LC
D STM474_1480 ompN; outer membrane protein N precursor K14062 ompN; outer membrane protein N
D STM474_2027 ompS; putative porin K14062 ompN; outer membrane protein N
D STM474_4425 lamB; maltoporin K02024 lamB; maltoporin
D STM474_1062 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D STM474_0858 ompX; outer membrane protein X K11934 ompX; outer membrane protein X
D STM474_2490 fadL; long-chain fatty acid outer membrane transporter K06076 fadL; long-chain fatty acid transport protein
D STM474_0432 tsx; nucleoside channel; receptor of phage T6 and colicin K K05517 tsx; nucleoside-specific channel-forming protein
D STM474_2237 stcC; putative outer membrane protein K07347 fimD; outer membrane usher protein
D STM474_4799 sthB; outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D STM474_0024 bcfC; fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_0184 stiC; putativie fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_3810 lpfC; long polar fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D STM474_0353 stbC; outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D STM474_0567 fimD; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
D STM474_0315 safC; putative fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_3931 misL; putative autotransporter MisL K12678 aidA-I; autotransporter family porin
D STM474_3645 bigA; putative surface-exposed virulence protein BigA K12516 bigA; putative surface-exposed virulence protein
D STM474_0590 apeE; outer membrane esterase K12686 apeE; outer membrane lipase/esterase
D STM474_2912 iroN; outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor
D STM474_0605 fepA; ferrienterobactin receptor K19611 fepA; ferric enterobactin receptor
D STM474_4313 btuB; vitamin B12/cobalamin outer membrane transporter K16092 btuB; vitamin B12 transporter
D STM474_1201 fhuE; ferric-rhodotorulic acid outer membrane transporter K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D STM474_2288 cirA; colicin I receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D STM474_0200 fhuA; ferrichrome outer membrane transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D STM474_0379 foxA; ferrioxamine B receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D STM474_1600 yncD; TonB-dependent receptor domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D STM474_3340 tolC; outer membrane channel K12340 tolC; outer membrane protein
D STM474_2813 putative outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D STM474_4454 putative ABC exporter outer membrane component K12543 lapE; outer membrane protein, adhesin transport system
D STM474_0364 Putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D STM474_2203 wza; putative outer membrane polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D STM474_0233 yaeT; outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family
D STM474_2622 yfgL; outer membrane protein assembly complex subunit YfgL K17713 bamB; outer membrane protein assembly factor BamB
D STM474_2591 nlpB; lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D STM474_2776 yfiO; outer membrane protein assembly complex subunit YfiO K05807 bamD; outer membrane protein assembly factor BamD
D STM474_2808 small membrane protein A K06186 bamE; outer membrane protein assembly factor BamE
D STM474_4606 ytfM; putative outer membrane protein K07278 tamA; translocation and assembly module TamA
D STM474_4607 ytfN; putative periplasmic protein K09800 tamB; translocation and assembly module TamB
D STM474_4233 putative outer membrane protein K22110 kdgM; oligogalacturonate-specific porin family protein
D STM474_1125 putative outer membrane protein K22110 kdgM; oligogalacturonate-specific porin family protein
D STM474_4193 ompL; outer membrane porin L K22110 kdgM; oligogalacturonate-specific porin family protein
D STM474_3863 putative inner membrane protein K21449 ata; trimeric autotransporter adhesin
D STM474_3478 yhbN; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D STM474_3477 lptc; Lipopolysaccharide export system protein lptC K11719 lptC; lipopolysaccharide export system protein LptC
D STM474_0097 imp; LPS-assembly protein K04744 lptD; LPS-assembly protein
D STM474_0668 rlpB; LPS-assembly lipoprotein RplB K03643 lptE; LPS-assembly lipoprotein
D STM474_3785 yhjL; cellulose synthase subunit BcsC K20543 bcsC; cellulose synthase operon protein C
D STM474_3024 sipB; cell invasion protein K13285 sipB; invasin B
D STM474_3022 sipD; translocation machinery component K13287 sipD; invasin D
D STM474_1404 sseB; putative pathogenicity island effector protein K15344 sseB; secreted effector protein SseB
D STM474_1406 sseC; translocation machinery component K15345 sseC; secreted effector protein SseC
D STM474_1407 sseD; translocation machinery component K15346 sseD; secreted effector protein SseD
D STM474_0688 corc; Magnesium and cobalt efflux protein corC K06189 corC; hemolysin (HlyC) family protein
D STM474_2270 yohJ; LrgA family protein K06518 cidA; holin-like protein
D STM474_4467 putative inner membrane protein K06518 cidA; holin-like protein
D STM474_2123 pduA; putative propanediol utilization protein PduA K27260 pduA; bacterial microcompartment shell protein
D STM474_2568 eutM; putative detox protein K04027 eutM; ethanolamine utilization protein EutM
D STM474_4495 melB; melibiose:sodium symporter K11104 melB; melibiose permease
D STM474_0588 pheP; phenylalanine-specific permease K11732 pheP; phenylalanine-specific permease
D STM474_2289 lysP; lysine transporter K11733 lysP; lysine-specific permease
D STM474_0158 aroP; aromatic amino acid transporter K11734 aroP; aromatic amino acid transport protein AroP
D STM474_2928 gabP; gamma-aminobutyrate transporter K11735 gabP; GABA permease
D STM474_0419 proY; proline-specific permease ProY K11736 proY; proline-specific permease ProY
D STM474_4595 cycA; D-alanine/D-serine/glycine permease K11737 cycA; D-serine/D-alanine/glycine transporter
D STM474_1597 ansP; L-asparagine transport protein K11738 ansP; L-asparagine permease
D STM474_2455 putative amino acid transporter K02205 rocE; arginine/ornithine permease
D STM474_0721 potE; putrescine transporter K03756 potE; putrescine:ornithine antiporter
D STM474_2663 cadB; putative cadaverine/lysine antiporter K03757 cadB; cadaverine:lysine antiporter
D STM474_1484 putative amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D STM474_4490 yjdE; arginine:agmatin antiporter K03759 adiC; arginine:agmatine antiporter
D STM474_2457 putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D STM474_4525 yjeH; inner membrane protein YjeH K16263 yjeH; amino acid efflux transporter
D STM474_0783 ybgR; zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein
D STM474_4243 fieF; ferrous iron efflux protein F K13283 fieF; ferrous-iron efflux pump FieF
D STM474_3344 ygiE; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D STM474_0365 putative cation efflux system protein K19594 gesB; gold/copper resistance efflux pump
D STM474_0495 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump
D STM474_2584 acrD; aminoglycoside/multidrug efflux system K18324 acrD; multidrug efflux pump
D STM474_3554 acrF; multidrug transport protein K18142 acrF; multidrug efflux pump
D STM474_2214 yegN; multidrug efflux system subunit MdtB K07788 mdtB; multidrug efflux pump
D STM474_2215 yegO; multidrug efflux system subunit MdtC K07789 mdtC; multidrug efflux pump
D STM474_1665 putative multidrug transporter K03297 emrE; small multidrug resistance pump
D STM474_4535 sugE; quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D STM474_1491 ydgE; multidrug efflux system protein MdtI K11742 mdtI; spermidine export protein MdtI
D STM474_1490 ydgF; multidrug efflux system protein MdtJ K11743 mdtJ; spermidine export protein MdtJ
D STM474_1528 ydeD; O-acetylserine/cysteine export protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D STM474_0857 ybiF; threonine and homoserine efflux system K11939 rhtA; inner membrane transporter RhtA
D STM474_4230 rhaT; rhamnose-proton symporter K02856 rhaT; L-rhamnose-H+ transport protein
D STM474_4133 rarD; chloramphenicol resistance K05786 rarD; chloramphenicol-sensitive protein RarD
D STM474_3132 putative integral membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D STM474_3716 putative inner membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D STM474_1604 ydcZ; putative inner membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D STM474_2398 putative inner membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D STM474_1514 ynfa; UPF0060 membrane protein ynfA K09771 TC.SMR3; small multidrug resistance family-3 protein
D STM474_4680 idnt; Gnt-II system L-idonate transporter K06157 idnT; Gnt-II system L-idonate transporter
D STM474_3680 gntT; high-affinity gluconate permease K06155 gntT; Gnt-I system high-affinity gluconate transporter
D STM474_3976 dsdX; permease DsdX K13629 dsdX; D-serine transporter
D STM474_3707 gntU; low affinity gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter
D STM474_3053 GntP K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D STM474_0170 kdgT; 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D STM474_0672 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D STM474_4522 dcuA; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D STM474_3767 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D STM474_4497 dcuB; anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D STM474_3864 lldP; L-lactate permease K00427 lldP; L-lactate permease
D STM474_0077 caiT; L-carnitine/gamma-butyrobetaine antiporter K05245 caiT; L-carnitine/gamma-butyrobetaine antiporter
D STM474_1621 tehA; potassium-tellurite ethidium and proflavin transporter K03304 tehA; tellurite resistance protein
D STM474_1788 chaA; calcium/sodium:proton antiporter K07300 chaA; Ca2+:H+ antiporter
D STM474_3474 yrbG; putative calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D STM474_3757 pitA; putative low-affinity inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D STM474_3544 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D STM474_1119 putP; major sodium/proline symporter K11928 putP; sodium/proline symporter
D STM474_4469 actP; acetate permease K14393 actP; cation/acetate symporter
D STM474_4479 gltP; glutamate/aspartate:proton symporter K11102 gltP; proton glutamate symport protein
D STM474_3783 dctA; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D STM474_3379 ygiU; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D STM474_3920 gltS; glutamate transport protein K03312 gltS; glutamate:Na+ symporter, ESS family
D STM474_0042 nhaA; pH-dependent sodium/proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D STM474_1827 nhaB; sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D STM474_1568 putative Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D STM474_4465 yjcE; Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D STM474_1822 ycgO; potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D STM474_0090 kefC; glutathione-regulated potassium-efflux system protein KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D STM474_0089 yabF; glutathione-regulated potassium-efflux system ancillary protein KefF K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D STM474_3623 kefB; glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D STM474_3624 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D STM474_0513 ybaL; putative cation:proton antiport protein K26735 KEA4_5_6; K+:H+ antiporter
D STM474_4164 trkH; potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D STM474_3574 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D STM474_3493 codB; cytosine permease K10974 codB; cytosine permease
D STM474_0543 allP; permease, cytosine/purine, uracil, thiamine, allantoin family K10975 allP; allantoin permease
D STM474_2600 uraA; uracil transporter K02824 uraA; uracil permease
D STM474_3921 yicE; putative purine permease K16345 xanP; xanthine permease XanP
D STM474_4464 yjcD; putative xanthine/uracil permeases family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D STM474_4030 yicO; inner membrane protein YicO K06901 pbuG; adenine/guanine/hypoxanthine permease
D STM474_2510 nupC; nucleoside transport K11535 nupC; nucleoside transport protein
D STM474_1969 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D STM474_3437 mtr; tryptophan permease K03835 mtr; tryptophan-specific transport protein
D STM474_3115 sdaC; putative serine transport protein K03837 sdaC; serine transporter
D STM474_3397 tdcC; threonine/serine transporter TdcC K03838 tdcC; threonine transporter
D STM474_3797 yhjV; putative transport protein K26603 yhjV; inner membrane transport protein
D STM474_3393 yhaO; inner membrane transport protein YhaO K26604 cyuP; cysteine uptake transport protein
D STM474_1618 benzoate transporter K05782 benE; benzoate membrane transport protein
D STM474_0639 citT; citrate/succinate transport antiport protein K09477 citT; citrate:succinate antiporter
D STM474_0212 yadQ; chloride transporter, chloride channel family K03281 clcA; chloride channel protein, CIC family
D STM474_1500 putative voltage-gated ClC-type chloride channel ClcB K03281 clcA; chloride channel protein, CIC family
D STM474_2505 Cl-channel, voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D STM474_2917 nixA; putative nickel transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D STM474_1800 ychM; sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D STM474_2509 mntH; manganese transport protein MntH K03322 mntH; manganese transport protein
D STM474_3844 yiaN; 2,3-diketo-l-gulonate trap transporter large permease protein yian K21393 yiaN; TRAP-type transport system large permease protein
D STM474_3843 yiaM; 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM K21394 yiaM; TRAP-type transport system small permease protein
D STM474_3845 yiaO; putative periplasmic dicarboxylate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D STM474_4379 yjbB; putative transport protein K03324 yjbB; phosphate:Na+ symporter
D STM474_0648 dcuC; C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D STM474_4104 wzxE; O-antigen translocase K16693 wzxE; enterobacterial common antigen flippase
D STM474_2187 wzxC; lipopolysaccharide biosynthesis protein WzxC K16695 wzxC; lipopolysaccharide exporter
D STM474_1166 mviN; putative virulence protein K03980 murJ; putative peptidoglycan lipid II flippase
D STM474_4059 trkD; potassium transport protein Kup K03549 kup; KUP system potassium uptake protein
D STM474_3213 yggA; arginine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D STM474_4138 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D STM474_4137 rhtC; threonine efflux system K05835 rhtC; threonine efflux protein
D STM474_0380 yahN; putative transport protein K03329 yahN; amino acid exporter
D STM474_2758 yfiK; neutral amino-acid efflux protein K11249 eamB; cysteine/O-acetylserine efflux protein
D STM474_1271 yeaS; leucine export protein LeuE K11250 leuE; leucine efflux protein
D STM474_4221 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D STM474_4220 putative inner membrane protein K26606 azlD; branched chain amino acid efflux pump
D STM474_2922 tricarboxylic transport K07793 tctA; putative tricarboxylic transport membrane protein
D STM474_2921 tricarboxylic transport K07794 tctB; putative tricarboxylic transport membrane protein
D STM474_2920 tricarboxylic transport K07795 tctC; putative tricarboxylic transport membrane protein
D STM474_3524 yhcP; p-hydroxybenzoic acid efflux subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D STM474_2596 perM; permease PerM K03548 perM; putative permease
D STM474_3746 yhhQ; putative membrane protein K09125 yhhQ; queuosine precursor transporter
D STM474_1532 marC; multiple drug resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D STM474_0133 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D STM474_1856 yebn; UPF0059 membrane protein yebN K23242 mntP; manganese efflux pump family protein
D STM474_3171 yohM; nickel/cobalt efflux system RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D STM474_2655 high-affinity nickel-transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D STM474_4736 yjiY; putative carbon starvation protein K23676 btsT; pyruvate/proton symporter
D STM474_1754 tonB; transport protein TonB K03832 tonB; periplasmic protein TonB
D STM474_0774 pal; peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein
D STM474_0772 tolA; cell envelope integrity inner membrane protein TolA K03646 tolA; colicin import membrane protein
D STM474_0773 tolB; translocation protein TolB K03641 tolB; TolB protein
D STM474_0057 putative oxalacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_0793 putative oxalacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_3511 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D STM474_0058 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D STM474_3512 oadA; oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D STM474_0792 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D STM474_0059 oag3; oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D STM474_3513 oadG; oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D STM474_0791 dcoC; oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D STM474_1107 scsB; suppression of copper sensitivity protein K08344 scsB; suppressor for copper-sensitivity B
D STM474_1590 narZ; nitrate reductase 2 alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1781 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1591 narY; nitrate reductase 2 beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1780 narH; nitrate reductase 1 beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1593 narV; nitrate reductase 2 gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1778 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D STM474_1583 fdnG; formate dehydorgenase-N alpha subunit K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D STM474_1582 fdnH; formate dehydrogenase-N beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D STM474_1581 fdnI; formate dehydrogenase-N subunit gamma K08350 fdnI; formate dehydrogenase-N, gamma subunit
D STM474_1506 putative dimethylsulfoxide reductase K07312 ynfH; Tat-targeted selenate reductase subunit YnfH
D STM474_1509 ynfe; Putative dimethyl sulfoxide reductase chain ynfE K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9]
D STM474_1508 ynff; putative dimethyl sulfoxide reductase chain ynfF K07310 ynfF; Tat-targeted selenate reductase subunit YnfF [EC:1.97.1.9]
D STM474_4501 putative anaerobic dimethylsulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D STM474_0951 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D STM474_4502 putative anaerobic dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D STM474_0952 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D STM474_1507 dmsb; Anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D STM474_4503 dmsC; dmso reductase anchor subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D STM474_0953 dmsC; anaerobic dimethyl sulfoxide reductase, C subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D STM474_3999 torA; trimethylamine N-oxide reductase subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D STM474_4000 torC; trimethylamine N-oxide reductase cytochrome c-like subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D STM474_3998 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D STM474_3816 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D STM474_2150 phsA; thiosulfate reductase precursor K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D STM474_2149 phsB; thiosulfate reductase electron transport protein PhsB K08353 phsB; thiosulfate reductase electron transport protein
D STM474_2148 phsC; thiosulfate reductase cytochrome B subunit K08354 phsC; thiosulfate reductase cytochrome b subunit
D STM474_1388 ttrA; tetrathionate reductase complex subunit A K08357 ttrA; tetrathionate reductase subunit A
D STM474_1390 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D STM474_1389 ttrC; tetrathionate reductase complex subunit C K08359 ttrC; tetrathionate reductase subunit C
D STM474_2952 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D STM474_2815 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D STM474_4455 cation efflux pump K12542 lapC; membrane fusion protein, adhesin transport system
D STM474_0366 putative auxiliary transport protein, membrane fusion protein (MFP) family K19595 gesA; membrane fusion protein, gold/copper resistance efflux system
D STM474_0496 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D STM474_3553 acrE; acriflavine resistance protein E K18141 acrE; membrane fusion protein, multidrug efflux system
D STM474_0805 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D STM474_2213 multidrug efflux system subunit MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D STM474_0928 ybjY; macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D STM474_3525 yhcQ; p-hydroxybenzoic acid efflux subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D STM474_2201 wzc; tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D STM474_0782 pnuC; nucleoside/purine/pyrimidine transporter K03811 pnuC; nicotinamide mononucleotide transporter
D STM474_3672 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D STM474_3673 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D STM474_3674 putative cytoplasmic protein K07490 feoC; ferrous iron transport protein C
D STM474_0391 sbmA; transport protein K17938 sbmA; peptide/bleomycin uptake transporter
D STM474_3758 uspB; universal stress protein UspB K06144 uspB; universal stress protein B
D STM474_4532 ecnA; putative entericidin A K16347 ecnA; entericidin A
D STM474_4533 ecnB; entericidin B membrane lipoprotein K16348 ecnB; entericidin B
D STM474_3991 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D STM474_2345 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D STM474_3938 mgtC; Mg2+ transport protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D STM474_1089 hiuh; 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D STM474_1906 putative inner membrane protein K07245 pcoD; copper resistance protein D
D STM474_1907 yobA; hypothetical protein K07156 copC; copper resistance protein C
D STM474_1290 mipA; MltA-interacting protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:seb02044]
D STM474_3340 tolC; outer membrane channel K12340 tolC; outer membrane protein
D STM474_2814 putative ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D STM474_4457 putative ABC-type bacteriocin/lantibiotic exporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D STM474_2815 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D STM474_4455 cation efflux pump K12542 lapC; membrane fusion protein, adhesin transport system
D STM474_2813 putative outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D STM474_4454 putative ABC exporter outer membrane component K12543 lapE; outer membrane protein, adhesin transport system
D STM474_p277 pilQ; ATP-binding protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D STM474_p273 pilU; prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D STM474_3247 yggR; twitching motility protein K02669 pilT; twitching motility protein PilT
D STM474_3146 ppdA; Prepilin peptidase dependent protein A K02679 ppdA; prepilin peptidase dependent protein A
D STM474_3145 ppdb; Prepilin peptidase-dependent protein B K02680 ppdB; prepilin peptidase dependent protein B
D STM474_3143 ppdC; Prepilin peptidase dependent protein C K02681 ppdC; prepilin peptidase dependent protein C
D STM474_0152 ppdD; putative major pilin subunit K02682 ppdD; prepilin peptidase dependent protein D
D STM474_0151 hofB; protein transport protein HofB K02504 hofB; protein transport protein HofB
D STM474_0150 hofC; type IV pilin biogenesis protein K02505 hofC; protein transport protein HofC
D STM474_3659 yrfD; putative periplasmic protein K12288 hofM; pilus assembly protein HofM
D STM474_3658 yrfC; putative inner membrane protein K12289 hofN; pilus assembly protein HofN
D STM474_3657 yrfB; putative inner membrane protein K12290 hofO; pilus assembly protein HofO
D STM474_3656 yrfA; putative inner membrane protein K12291 hofP; pilus assembly protein HofP
D STM474_3655 hofQ; protein transport protein HofQ K02507 hofQ; protein transport protein HofQ
D STM474_3249 YGGT family protein K02221 yggT; YggT family protein
D STM474_0474 competence protein ComEA K02237 comEA; competence protein ComEA
D STM474_0969 ycai; Uncharacterized protein ycaI K02238 comEC; competence protein ComEC
D STM474_1400 ssaC; outer membrane secretin precursor K03219 yscC; type III secretion protein C
D STM474_1401 ssaD; virulence protein K03220 yscD; type III secretion protein D
D STM474_3012 prgI; needle complex major subunit K03221 yscF; type III secretion protein F
D STM474_1412 ssaG; secretion system apparatus SsaG K03221 yscF; type III secretion protein F
D STM474_1415 ssaJ; needle complex inner membrane lipoprotein K03222 yscJ; type III secretion protein J
D STM474_1421 ssaN; type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D STM474_1424 ssaQ; type III secretion system protein K03225 yscQ; type III secretion protein Q
D STM474_3030 spaO; surface presentation of antigens protein SpaO K03225 yscQ; type III secretion protein Q
D STM474_1425 ssaR; type III secretion system protein K03226 yscR; type III secretion protein R
D STM474_1426 ssaS; type III secretion system apparatus protein K03227 yscS; type III secretion protein S
D STM474_1427 ssaT; type III secretion system apparatus protein K03228 yscT; type III secretion protein T
D STM474_1428 ssaU; secretion system apparatus protein SsaU K03229 yscU; type III secretion protein U
D STM474_1420 ssaV; secretion system apparatus protein SsaV K03230 yscV; type III secretion protein V
D STM474_3036 inva; Invasion protein invA K03230 yscV; type III secretion protein V
D STM474_3038 invG; outer membrane secretin precursor K22504 invG; type III secretion system outer membrane ring protein
D STM474_3010 prgK; needle complex inner membrane lipoprotein K22505 prgK; type III secretion system inner membrane ring protein
D STM474_3034 invC; ATP synthase SpaL K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D STM474_3029 spaP; surface presentation of antigens protein SpaP K22507 spaP; type III secretion system export apparatus protein
D STM474_3028 spaq; Surface presentation of antigens protein SpaQ K22508 spaQ; type III secretion system export apparatus protein
D STM474_3027 spaR; needle complex export protein K22509 spaR; type III secretion system export apparatus protein
D STM474_3026 spaS; surface presentation of antigens protein SpaS K22510 spaS; type III secretion system export apparatus switch protein
D STM474_3037 invE; invasion protein K22511 invE; type III secretion system protein
D STM474_3035 spak; Surface presentation of antigens protein spaK K22512 spaK; type III secretion system chaperone
D STM474_3033 invI; needle complex assembly protein K22513 spaM; type III secretion system protein
D STM474_3032 invJ; needle length control protein K22514 spaN; type III secretion system protein
D STM474_3013 prgH; cell invasion protein K22488 prgH; type III secretion system protein
D STM474_3011 prgJ; needle complex minor subunit K22487 prgJ; type III secretion system protein
D STM474_1946 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D STM474_1947 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D STM474_2001 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D STM474_2003 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D STM474_2004 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D STM474_2009 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D STM474_2010 fliO; flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D STM474_2011 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D STM474_2012 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D STM474_2013 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D STM474_p1010 traG; conjugal transfer mating pair stabilization protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D STM474_p1014 traF; conjugative transfer assembly protein K12057 traF; conjugal transfer pilus assembly protein TraF
D STM474_p1016 traN; conjugative transfer aggregate stability protein K12058 traN; conjugal transfer mating pair stabilization protein TraN
D STM474_p1018 trbC; conjugative transfer assembly protein K12059 trbC; conjugal transfer pilus assembly protein TrbC
D STM474_p1020 traU; conjugative transfer assembly protein K12060 traU; conjugal transfer pilus assembly protein TraU
D STM474_p1021 traW; conjugative transfer assembly protein K12061 traW; conjugal transfer pilus assembly protein TraW
D STM474_p1022 trbI; conjugative transfer protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D STM474_p1023 traC; conjugal transfer ATP-binding protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D STM474_p1027 traV; conjugative transfer assembly protein K12064 traV; conjugal transfer pilus assembly protein TraV
D STM474_p1030 traB; conjugative transfer assembly protein K12065 traB; conjugal transfer pilus assembly protein TraB
D STM474_p1031 traK; conjugative transfer assembly protein K12066 traK; conjugal transfer pilus assembly protein TraK
D STM474_p1032 traE; conjugative transfer assembly protein K12067 traE; conjugal transfer pilus assembly protein TraE
D STM474_p1033 traL; conjugal transfer pilus assembly protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D STM474_3190 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D STM474_p1011 traH; trah pilus assembly protein trah K12072 traH; conjugative transfer pilus assembly protein TraH
D STM474_p266 traJ; plasmid transfer ATPase TraJ K12203 dotB; defect in organelle trafficking protein DotB [EC:7.2.4.8]
D STM474_p267 traI; TraI protein K12204 dotC; defect in organelle trafficking protein DotC
D STM474_p268 traH; TraH protein K12205 dotD; defect in organelle trafficking protein DotD
D STM474_p254 traU; TraU protein K12206 icmB; intracellular multiplication protein IcmB [EC:7.2.4.8]
D STM474_p260 traO; TraO protein K12209 icmE; intracellular multiplication protein IcmE
D STM474_p259 traP; TraPprotein K12211 icmG; intracellular multiplication protein IcmG
D STM474_p261 traN; TraN protein K12213 icmK; intracellular multiplication protein IcmK
D STM474_p262 traM; TraM protein K12214 icmL; intracellular multiplication protein IcmL
D STM474_p242 trbC; TrbC protein K12217 icmO; intracellular multiplication protein IcmO [EC:7.2.4.8]
D STM474_p244 trbA; TrbA protein K12218 icmP; intracellular multiplication protein IcmP
D STM474_p265 traK; TraK protein K12222 icmT; intracellular multiplication protein IcmT
D STM474_p263 traL; TraL protein K12227 K12227; TraL protein
D STM474_p243 trbB; protein-disulfide K12228 trbB; TrbB protein
D STM474_3931 misL; putative autotransporter MisL K12678 aidA-I; autotransporter family porin
D STM474_3645 bigA; putative surface-exposed virulence protein BigA K12516 bigA; putative surface-exposed virulence protein
D STM474_0590 apeE; outer membrane esterase K12686 apeE; outer membrane lipase/esterase
D STM474_0297 sciS; SciS protein K11891 impL; type VI secretion system protein ImpL
D STM474_0294 Putative outer membrane protein, OmpA family K11892 impK; type VI secretion system protein ImpK
D STM474_0293 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D STM474_0278 putative cytoplasmic protein K11895 impH; type VI secretion system protein ImpH
D STM474_0279 vasA; type VI secretion protein K11896 impG; type VI secretion system protein ImpG
D STM474_0280 putative cytoplasmic protein K11897 impF; type VI secretion system protein ImpF
D STM474_0285 SciI protein K11900 impC; type VI secretion system protein ImpC
D STM474_0284 putative cytoplasmic protein K11901 impB; type VI secretion system protein ImpB
D STM474_0277 putative cytoplasmic protein K11902 impA; type VI secretion system protein ImpA
D STM474_0288 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D STM474_0291 putative cytoplasmic protein K11903 hcp; type VI secretion system secreted protein Hcp
D STM474_3280 putative cytoplasmic protein K11903 hcp; type VI secretion system secreted protein Hcp
D STM474_0301 Rhs-family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D STM474_0292 putative outer membrane lipoprotein K11906 vasD; type VI secretion system protein VasD
D STM474_0283 putative chaperone ATPase K11907 vasG; type VI secretion system protein VasG
D STM474_0298 putative cytoplasmic protein K11890 impM; type VI secretion system protein ImpM
D STM474_0281 sciE; SciE protein K11898 impE; type VI secretion system protein ImpE
D STM474_0355 stbA; putative fimbrial major subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D STM474_0564 fimA; type-1 fimbrial protein, A chain K07345 fimA; major type 1 subunit fimbrin (pilin)
D STM474_0566 fimC; chaperone protein FimC K07346 fimC; fimbrial chaperone protein
D STM474_3811 lpfB; long polar fimbrial chaperone precursor K07346 fimC; fimbrial chaperone protein
D STM474_2237 stcC; putative outer membrane protein K07347 fimD; outer membrane usher protein
D STM474_4799 sthB; outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D STM474_0024 bcfC; fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_0184 stiC; putativie fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_3810 lpfC; long polar fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D STM474_0353 stbC; outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D STM474_0567 fimD; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
D STM474_0315 safC; putative fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_0569 fimF; putative fimbrial protein K07348 fimF; minor fimbrial subunit
D STM474_0568 fimH; minor fimbrial subunit K07350 fimH; minor fimbrial subunit
D STM474_0205 stfC; putative fimbrial outer membrane usher K12518 papC; outer membrane usher protein PapC
D STM474_3176 stdB; putative outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D STM474_0206 stfD; putative periplasmic fimbrial chaperone K12519 papD; chaperone protein PapD
D STM474_3175 stdC; putative fimbrial chaparone K12519 papD; chaperone protein PapD
D STM474_1139 csgA; cryptic curlin major subunit K04334 csgA; major curlin subunit
D STM474_1138 csgB; curlin minor subunit K04335 csgB; minor curlin subunit
D STM474_1140 csgC; putative autoagglutination protein K04336 csgC; curli production protein
D STM474_1136 csgE; curli assembly protein CsgE K04337 csgE; curli production assembly/transport component CsgE
D STM474_1135 csgF; curli assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF
D STM474_1134 csgG; assembly/transport component in curli production K06214 csgG; curli production assembly/transport component CsgG
D STM474_0142 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D STM474_3874 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D STM474_0426 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D STM474_4332 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D STM474_0427 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D STM474_3451 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D STM474_0141 yacA; SecA regulator SecM K13301 secM; secretion monitor
D STM474_3585 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D STM474_2801 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D STM474_3738 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D STM474_0425 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D STM474_4020 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D STM474_4152 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D STM474_4153 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D STM474_4154 tatC; TatABCE protein translocation system subunit K03118 tatC; sec-independent protein translocase protein TatC
D STM474_0653 tatE; twin arginine translocase protein E K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:seb02042]
D STM474_4604 ytfL; putative hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D STM474_2803 CBS/transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D STM474_3196 yqfA; putative hemolysin K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:seb02022]
D STM474_0416 phoR; phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D STM474_0415 phoB; transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D STM474_1228 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D STM474_1229 phoP; DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D STM474_3668 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D STM474_3669 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D STM474_1478 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D STM474_1482 rstA; DNA-binding transcriptional regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D STM474_4240 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D STM474_4241 cpxR; DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D STM474_4795 creC; sensor protein CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D STM474_4794 creB; DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D STM474_2217 baeS; signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D STM474_2218 baeR; DNA-binding transcriptional regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D STM474_4487 basS; sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D STM474_4488 basR; DNA-binding transcriptional regulator BasR K07771 basR; two-component system, OmpR family, response regulator BasR
D STM474_3331 ygiY; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D STM474_3330 ygiX; DNA-binding transcriptional regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D STM474_0725 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D STM474_0724 kdpE; DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D STM474_4003 torS; hybrid sensory histidine kinase TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D STM474_4001 torR; DNA-binding transcriptional regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D STM474_3488 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D STM474_4804 arcA; two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D STM474_2918 tctE; tricarboxylic transport: regulatory protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D STM474_2919 tctD; regulatory protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D STM474_1087 copS; copper resistance protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D STM474_1088 copR; transcriptional regulatory protein YedW K02483 K02483; two-component system, OmpR family, response regulator
D STM474_1783 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D STM474_1784 narL; transcriptional regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D STM474_2583 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D STM474_2342 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D STM474_3963 uhpB; sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D STM474_3964 uhpA; DNA-binding transcriptional activator UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D STM474_2367 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D STM474_2365 yojN; phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D STM474_2366 rcsB; transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D STM474_3103 barA; hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D STM474_1979 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D STM474_0570 fimZ; transcriptional regulator FimZ K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D STM474_0056 sensor kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D STM474_0646 dpiB; sensory histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D STM474_0055 putative transcriptional regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D STM474_0647 dpiA; two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D STM474_4500 dcuS; sensory histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D STM474_4499 dcuR; DNA-binding transcriptional activator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR
D STM474_2247 yehU; putative sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D STM474_2246 yehT; putative two-component response-regulatory protein YehT K02477 K02477; two-component system, LytTR family, response regulator
D STM474_4184 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D STM474_4183 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D STM474_4359 zraS; sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D STM474_4360 zraR; transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG
D STM474_2669 yfhK; putative sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D STM474_2667 yfhA; putative transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D STM474_2496 pgtB; phosphoglycerate transport system sensor protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D STM474_2495 pgtA; activator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D STM474_1954 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D STM474_1949 cheY; chemotaxis regulatory protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D STM474_1950 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D STM474_2410 putative chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D STM474_1391 ttrS; sensory histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D STM474_1392 ttrR; response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D STM474_1398 ssrA; sensor kinase K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D STM474_1397 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D STM474_1770 hnr; response regulator of RpoS K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:seb02035]
D STM474_1954 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D STM474_1953 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D STM474_1951 cheR; chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D STM474_1950 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D STM474_1949 cheY; chemotaxis regulatory protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D STM474_1948 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D STM474_2410 putative chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D STM474_3744 tcp; methyl-accepting transmembrane citrate/phenol chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein
D STM474_3303 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D STM474_4737 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D STM474_1952 cheM; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D STM474_3370 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D STM474_1638 trg; methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D STM474_3371 aer; aerotaxis sensor receptor K03776 aer; aerotaxis receptor
D STM474_2003 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D STM474_2004 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D STM474_2005 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D STM474_2010 fliO; flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D STM474_2011 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D STM474_2012 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D STM474_2013 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D STM474_1946 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D STM474_1947 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D STM474_1945 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE
D STM474_2002 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D STM474_2008 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D STM474_2009 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D STM474_2001 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D STM474_1177 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D STM474_1169 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D STM474_1176 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D STM474_2007 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D STM474_1999 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D STM474_2006 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D STM474_1170 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D STM474_1171 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D STM474_1172 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D STM474_1174 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D STM474_1175 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D STM474_1178 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D STM474_1173 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D STM474_1179 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D STM474_1180 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D STM474_1167 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D STM474_1989 fliB; lysine-N-methylase K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D STM474_1990 fliC; flagellin K02406 fliC; flagellin
D STM474_2906 fljB; flagellin K02406 fliC; flagellin
D STM474_1992 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D STM474_1993 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D STM474_1994 fliT; flagellar biosynthesis protein FliT K02423 fliT; flagellar protein FliT
D STM474_1958 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D STM474_1957 flhC; transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D STM474_1987 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D STM474_1956 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D STM474_1955 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D STM474_1985 fliY; cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein
D STM474_1986 fliZ; flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D STM474_1168 flgM; anti-sigma28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D STM474_3247 yggR; twitching motility protein K02669 pilT; twitching motility protein PilT
D STM474_0355 stbA; putative fimbrial major subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D STM474_0564 fimA; type-1 fimbrial protein, A chain K07345 fimA; major type 1 subunit fimbrin (pilin)
D STM474_0566 fimC; chaperone protein FimC K07346 fimC; fimbrial chaperone protein
D STM474_3811 lpfB; long polar fimbrial chaperone precursor K07346 fimC; fimbrial chaperone protein
D STM474_2237 stcC; putative outer membrane protein K07347 fimD; outer membrane usher protein
D STM474_4799 sthB; outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D STM474_0024 bcfC; fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_0184 stiC; putativie fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_3810 lpfC; long polar fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D STM474_0353 stbC; outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D STM474_0567 fimD; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
D STM474_0315 safC; putative fimbrial usher K07347 fimD; outer membrane usher protein
D STM474_0569 fimF; putative fimbrial protein K07348 fimF; minor fimbrial subunit
D STM474_0568 fimH; minor fimbrial subunit K07350 fimH; minor fimbrial subunit
D STM474_0565 fimI; fimbrial protein K07351 fimI; fimbrial protein
D STM474_0025 bcfD; fimbrial subunit K07356 sfmH; fimbrial protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:seb04812]
D STM474_3535 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D STM474_p218 parM; plasmid segregation protein ParM K18640 parM; plasmid segregation protein ParM
D STM474_3021 sipA; secreted effector protein K13284 sipA; invasin A
D STM474_3023 sipC; translocation machinery component K13286 sipC; invasin C
D STM474_0139 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D STM474_0138 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D STM474_1835 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D STM474_1836 minD; cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D STM474_1837 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D STM474_p216 ParA K03496 parA; chromosome partitioning protein
D STM474_p1056 parA; plasmid partition protein A K03496 parA; chromosome partitioning protein
D STM474_p1055 parB; plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D STM474_p1041 putative ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:seb04147]
D STM474_0507 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
D STM474_3096 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D STM474_1294 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D STM474_3216 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D STM474_1382 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D STM474_1920 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D STM474_3639 ppia; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D STM474_0421 peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D STM474_4527 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D STM474_0013 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D STM474_4415 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D STM474_2612 imdH; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D STM474_3610 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D STM474_4331 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D STM474_1202 ycfF; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D STM474_2527 yfeH; putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D STM474_1840 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D STM474_3166 yqeF; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D STM474_0508 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D STM474_0503 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D STM474_4307 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D STM474_3448 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D STM474_4612 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D STM474_0799 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D STM474_3705 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D STM474_4268 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D STM474_4185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D STM474_0387 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D STM474_3209 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D STM474_4362 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D STM474_0162 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D STM474_0080 fixB; putative electron transfer flavoprotein FixB K03522 fixB; electron transfer flavoprotein alpha subunit
D STM474_0882 putative electron transfer protein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D STM474_1815 putative glutamic dehyrogenase-like protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D STM474_1918 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D STM474_4263 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D STM474_0797 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D STM474_4536 blc; outer membrane lipoprotein blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:seb02048]
D STM474_3079 cas1; crispr-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D STM474_3078 ygbF; YgbF protein K09951 cas2; CRISPR-associated protein Cas2
D STM474_3085 ygcB; putative helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D STM474_3084 putative cytoplasmic protein K19123 casA; CRISPR system Cascade subunit CasA
D STM474_3083 putative transposase K19046 casB; CRISPR system Cascade subunit CasB
D STM474_3082 yghJ; putative cytoplasmic protein K19124 casC; CRISPR system Cascade subunit CasC
D STM474_3081 putative cytoplasmic protein K19125 casD; CRISPR system Cascade subunit CasD
D STM474_3080 ygcH; putative cytoplasmic protein K19126 casE; CRISPR system Cascade subunit CasE
D STM474_4730 hsdR; type III restriction enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D STM474_4728 hsdS; type I restriction enzyme specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D STM474_4729 hsdM; type I restriction enzyme EcoKI M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D STM474_2855 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STM474_3651 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STM474_3548 yhdJ; putative methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D STM474_p1050 putative adenine-specific DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D STM474_p221 putative methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D STM474_2023 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D STM474_0372 res; DNA restriction enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5]
D STM474_0371 mod; DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D STM474_2057 phage protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D STM474_4731 mrr; restriction endonuclease K07448 mrr; restriction system protein
D STM474_4688 restriction endonuclease K07448 mrr; restriction system protein
D STM474_p246 pndA; post-segregation killing protein K18920 hokA; protein HokA
D STM474_0307 hypothetical protein K19048 symE; toxic protein SymE
D STM474_4727 yjiW; endoribonuclease SymE K19048 symE; toxic protein SymE
D STM474_0309 hypothetical protein K19048 symE; toxic protein SymE
D STM474_0431 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D STM474_3794 ldrd; Small toxic polypeptide ldrD K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D STM474_4646 stbE; putative stability protein StbE K06218 relE; mRNA interferase RelE/StbE
D STM474_1561 putative cytoplasmic protein K06218 relE; mRNA interferase RelE/StbE
D STM474_4645 relB; bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D STM474_1562 putative cytoplasmic protein K18923 stbD; antitoxin StbD
D STM474_3684 putative cytoplasmic protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D STM474_3685 putative DNA-damage-inducibile protein K07473 dinJ; DNA-damage-inducible protein J
D STM474_0493 hha; hemolysin expression-modulating protein K05839 hha; haemolysin expression modulating protein
D STM474_0494 ybaj; Uncharacterized protein ybaJ K19162 tomB; hha toxicity modulator TomB
D STM474_1701 pspC; DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D STM474_1702 pspB; phage shock protein B K03970 pspB; phage shock protein B
D STM474_p1093 ccdB; toxin K19163 ccdB; toxin CcdB
D STM474_p1094 ccdA; antidote K19164 ccdA; antitoxin CcdA
D STM474_3099 plasmid stabilization system protein, RelE/ParE family K19092 parE1_3_4; toxin ParE1/3/4
D STM474_3100 putative transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4
D STM474_3725 death-on-curing protein K07341 doc; death on curing protein
D STM474_3726 yhhV; putative cytoplasmic protein K19165 phd; antitoxin Phd
D STM474_4208 putative cytoplasmic protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D STM474_4207 putative cytoplasmic protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D STM474_3180 plasmid maintenance protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D STM474_p1006 plasmid maintenance protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D STM474_p1005 putative cytoplasmic protein K18829 mvpT; antitoxin VapB
D STM474_3181 putative virulence-associated protein K18829 mvpT; antitoxin VapB
D STM474_4665 yjgK; putative cytoplasmic protein K19334 tabA; biofilm protein TabA
D STM474_1157 bssS; biofilm formation regulatory protein BssS K12148 bssS; biofilm regulator BssS
D STM474_0879 bssR; biofilm regulator BssR K19688 bssR; biofilm regulator BssR
D STM474_1211 ycfR; putative outer membrane protein K12151 bhsA; multiple stress resistance protein BhsA
D STM474_0139 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D STM474_3535 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D STM474_3327 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D STM474_3335 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D STM474_2516 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D STM474_3193 ygfX; putative inner membrane protein K19168 cptA; toxin CptA
D STM474_3194 ygfy; UPF0350 protein ygfY K09159 cptB; antitoxin CptB
D STM474_2647 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:seb04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:seb04090]
C 01504 Antimicrobial resistance genes [BR:seb01504]
D STM474_1631 Cryptic aminoglycoside resistance protein K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D STM474_1265 aadA; aminoglycoside resistance protein K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47]
D STM474_p311 strA; aminoglycoside resistance protein A K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87]
D STM474_p310 strB; streptomycin phosphotransferase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D STM474_0892 mdfA; multidrug translocase MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D STM474_p301 folP; Dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D STM474_1587 smvA; methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D STM474_1612 pcgL; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D STM474_1228 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D STM474_1229 phoP; DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D STM474_2494 pgtE; outer membrane protease K08477 pgtE; outer membrane protease E [EC:3.4.21.-]
D STM474_0496 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D STM474_0495 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump
D STM474_0364 Putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D STM474_0520 cueR; DNA-binding transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D STM474_4517 putative regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D STM474_0366 putative auxiliary transport protein, membrane fusion protein (MFP) family K19595 gesA; membrane fusion protein, gold/copper resistance efflux system
D STM474_0365 putative cation efflux system protein K19594 gesB; gold/copper resistance efflux pump
D STM474_3551 envR; DNA-binding transcriptional regulator EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D STM474_3553 acrE; acriflavine resistance protein E K18141 acrE; membrane fusion protein, multidrug efflux system
D STM474_3554 acrF; multidrug transport protein K18142 acrF; multidrug efflux pump
D STM474_3340 tolC; outer membrane channel K12340 tolC; outer membrane protein
D STM474_1530 marA; DNA-binding transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D STM474_0985 ompF; outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:seb00537]
D STM474_1817 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D STM474_3771 treF; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:seb03200]
D STM474_2700 prophage tail assembly protein K26975 K; Enterobacteria phage tail tip assembly protein K
D STM474_2699 vtai; Tail assembly protein I K26976 I; Enterobacteria phage tail tip assembly protein I
D STM474_2059 lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
D STM474_2720 endopeptidase-like protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
D STM474_1020 bacteriophage lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:seb03100]
D STM474_t2512 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t2513 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t0261 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t4168 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t4317 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D STM474_t1263 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t4109 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2493 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2959 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2962 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2961 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t1245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D STM474_t2082 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D STM474_t2083 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D STM474_t2099 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D STM474_t2097 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D STM474_t0265 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D STM474_t4073 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D STM474_t0276 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D STM474_t1975 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D STM474_t0694 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D STM474_t0695 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D STM474_t0697 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D STM474_t0698 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D STM474_t2771 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D STM474_t4365 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D STM474_t3561 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D STM474_t4069 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D STM474_t3184 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4329 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t1976 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4549 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4551 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D STM474_t4110 tRNA-His K14226 tRNA-His; tRNA His
D STM474_t0260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D STM474_t4316 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D STM474_t4167 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D STM474_t0699 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t3450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4685 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t1974 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4111 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4757 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4759 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t4758 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D STM474_t0776 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t0779 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t2520 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t0780 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t0778 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D STM474_t3135 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t3136 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t3447 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t3367 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t0696 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t0700 tRNA-Met K14230 tRNA-Met; tRNA Met
D STM474_t3265 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D STM474_t4518 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D STM474_t2322 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D STM474_t3806 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D STM474_t4112 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D STM474_t2080 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t1078 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t2963 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t0936 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t1128 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D STM474_t3557 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D STM474_t4330 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D STM474_t4326 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D STM474_t0339 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D STM474_t4074 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D STM474_t4327 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D STM474_t1775 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D STM474_t1774 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D STM474_t1429 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t0777 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t2517 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t2518 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t2519 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t1430 tRNA-Val K14237 tRNA-Val; tRNA Val
D STM474_t3925 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D STM474_r2772 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4166 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4068 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r3562 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r4364 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r0259 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D STM474_r3559 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4366 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4169 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r4318 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r0262 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r2770 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D STM474_r0264 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4320 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r2769 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4171 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4072 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r3556 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r3558 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D STM474_r4368 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D STM474_4681 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D STM474_4682 idnD; L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D STM474_3316 dkgA; 2,5-diketo-D-gluconate reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D STM474_0266 dkgB; 2,5-didehydrogluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D STM474_0172 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 2 K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D STM474_3054 putative nucleoside-diphosphate-sugar epimerase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D STM474_3058 ygbJ; 3-hydroxyisobutyrate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D STM474_0622 ybdh; Uncharacterized oxidoreductase ybdH K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D STM474_2507 putative cytoplasmic protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D STM474_1632 putative oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D STM474_0887 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D STM474_3272 putative arylsulfatase regulator K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7]
D STM474_0441 yajO; putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D STM474_3373 fadH; 2,4-dieonyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D STM474_1602 yncB; putative NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D STM474_0076 caiA; crotonobetainyl-CoA dehydrogenase K08297 caiA; crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13]
D STM474_1156 solA; N-methyltryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D STM474_0884 putative dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D STM474_0081 fixC; FixC protein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D STM474_1357 ydis; putative electron transfer flavoprotein-quinone oxidoreductase ydiS K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D STM474_4439 qor; quinone oxidoreductase, NADPH-dependent K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D STM474_3332 mdaB; NADPH-specific quinone oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D STM474_1654 acpD; azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D STM474_0629 ahpF; alkyl hydroperoxide reductase F52a subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D STM474_4605 msrA; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D STM474_1295 yeaA; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D STM474_2446 yfcG; putative glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D STM474_3290 yghU; putative glutathione S-transferase YghU K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D STM474_3387 yqjG; putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D STM474_3539 yedY; putative sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D STM474_1651 cybB; cytochrome b561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D STM474_1253 putative inner membrane protein K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D STM474_3997 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D STM474_1748 putative catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D STM474_2594 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D STM474_1695 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D STM474_0628 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D STM474_1575 osmC; osmotically inducible protein C K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D STM474_2549 putative iron-dependent peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D STM474_3710 yhhW; protein YhhW K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D STM474_0938 putative cytoplasmic protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D STM474_2661 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D STM474_3368 yqjH; putative transporter K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9]
D STM474_1967 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D STM474_0177 cueO; multicopper oxidase K14588 cueO; cuproxidase [EC:1.16.3.4]
D STM474_4266 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D STM474_2979 ygbD; nitric oxide reductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
D STM474_2598 yfgD; putative arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D STM474_4647 nrdG; anaerobic ribonucleotide reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D STM474_0869 pflE; putative pyruvate formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D STM474_4299 pflC; pyruvate formate lyase II activase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D STM474_0956 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D STM474_0923 hcr; HCP oxidoreductase, NADH-dependent K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D STM474_3066 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D STM474_1433 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D STM474_1620 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D STM474_1144 mdoC; glucans biosynthesis protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D STM474_0492 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D STM474_1595 nhoA; putative arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D STM474_0687 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D STM474_3430 yhbS; putative transport protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D STM474_3815 yiac; Uncharacterized N-acetyltransferase yiaC K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D STM474_4370 acetyltransferase, gnat family K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D STM474_4671 yjgM; putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D STM474_3825 putative acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D STM474_1603 yncA; putative acyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D STM474_0942 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D STM474_2908 iroB; putative glycosyl transferase K23725 iroB; enterobactin C-glucosyltransferase [EC:2.4.1.369]
D STM474_2763 yfiP; putative cytoplasmic protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D STM474_3148 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D STM474_2135 pduO; propanediol utilization protein K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D STM474_3853 putative transcriptional regulator K18673 bglK; beta-glucoside kinase [EC:2.7.1.85]
D STM474_2363 apbE; thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D STM474_4201 yihV; putative sugar kinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184]
D STM474_3057 ygbK; putative tRNA synthase K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D STM474_3768 putative sugar kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D STM474_0171 putative inner membrane protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D STM474_4248 putative dehydrogenase K23147 E2.7.1.223; aminoimidazole riboside kinase [EC:2.7.1.223]
D STM474_3411 putative fructose-1-phosphate kinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D STM474_1352 ydia; Putative phosphotransferase ydiA K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D STM474_3355 glnE; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D STM474_4025 putative reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D STM474_1349 ydiu; UPF0061 protein ydiU K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D STM474_4745 mdoB; phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D STM474_4375 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D STM474_3346 arylsulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D STM474_4281 putative arylsulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D STM474_4159 arylsulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D STM474_1142 Macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D STM474_2911 iroE; putative hydrolase K23721 iroE; apo-salmochelin esterase [EC:3.1.1.107]
D STM474_0606 fes; enterobactin/ferric enterobactin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D STM474_2910 iroD; Enterochelin esterase-like protein (Fes) K23723 iroD; iron(III)-salmochelin esterase [EC:3.1.1.109]
D STM474_0511 aes; acetyl esterase K01066 aes; acetyl esterase [EC:3.1.1.-]
D STM474_1635 putative carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D STM474_0769 ybgC; acyl-CoA thioester hydrolase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D STM474_1876 pphA; serine/threonine protein phosphatase 1 K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D STM474_3047 pphB; serine/threonine-specific protein phosphatase 2 K07314 pphB; serine/threonine protein phosphatase 2 [EC:3.1.3.16]
D STM474_0865 ybiV(2); putative hydrolase K07757 ybiV; sugar-phosphatase [EC:3.1.3.23]
D STM474_0867 suph; Sugar phosphatase supH K07757 ybiV; sugar-phosphatase [EC:3.1.3.23]
D STM474_1738 trph; Protein trpH K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D STM474_2486 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D STM474_2308 rtn; Protein Rtn K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D STM474_4459 yjcC; putative diguanylate cyclase/phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D STM474_0488 ylab; Uncharacterized protein YlaB K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D STM474_0357 Putative diguanylate cyclase/phosphodiesterase domain 1 K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D STM474_2606 putative diguanylate cyclase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D STM474_2511 yfeA; diguanylate cyclase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D STM474_3784 yhjK; protein YhjK K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D STM474_3241 endA; endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D STM474_4769 yjjV; putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D STM474_4155 tatD; DNase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D STM474_1199 ycfH; putative metallodependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D STM474_0717 ybff; Esterase ybfF K01175 ybfF; esterase [EC:3.1.-.-]
D STM474_0333 frsA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D STM474_3786 endo-1,4-D-glucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D STM474_2838 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D STM474_2721 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D STM474_1019 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D STM474_1944 putative cytoplasmic protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D STM474_0044 putative glycosyl hydrolase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D STM474_3923 yicI; alpha-xylosidase YicI K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D STM474_4196 yihQ; alpha-glucosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199]
D STM474_3571 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D STM474_1322 chbg; UPF0249 protein ChbG K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D STM474_0652 ybeM; putative hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D STM474_3197 yqfB; protein YqfB K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D STM474_4656 yjgF; putative translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D STM474_0592 hypothetical protein K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D STM474_3356 ygiF; putative cytoplasmic protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D STM474_2192 nudD; GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-]
D STM474_0478 cof; HMP-PP phosphatase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D STM474_2391 yfaO; putative NTP pyrophosphohydrolase K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-]
D STM474_2580 yffH; putative pyrophosphohydrolase K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D STM474_0367 putative cation transport ATPase K19597 golT; Au+-exporting ATPase [EC:3.6.1.-]
D STM474_1185 maf; Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D STM474_4058 yieN; regulatory ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D STM474_3056 ygbL; aldolase class II protein YgbL K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D STM474_4199 yihT; putative aldolase K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57]
D STM474_4294 talC; fructose-6-phosphate aldolase K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-]
D STM474_4553 yjeF; putative sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D STM474_0073 caiD; carnitinyl-CoA dehydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149]
D STM474_0989 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D STM474_3130 csdA; cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D STM474_1124 putative inner membrane protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D STM474_3124 fucU; putative L-fucose-binding protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D STM474_4223 L-rhamnose 1-epimerase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D STM474_1629 ribulose-phosphate 3-epimerase K14587 sgcE; protein sgcE [EC:5.1.3.-]
D STM474_2976 gutQ; gutQ protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D STM474_4198 yihS; putative isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D STM474_3055 ygbM; YgbM protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D STM474_0074 caiC; putative crotonobetaine/carnitine-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D STM474_4613 mpl; UDP-N-acetylmuramate/L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D STM474_3686 rtcA; RNA 3'-terminal-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D STM474_1463 rnfD; electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D STM474_1464 rnfC; electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D STM474_1465 ydgM; electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D STM474_3743 zntA; zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D STM474_3937 mgtB; Mg2+ transporter K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D STM474_4654 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D STM474_0196 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D STM474_4632 putative endonuclease K06605 iolH; myo-inositol catabolism protein IolH
D STM474_4002 torT; periplasmic sensory protein associated with the TorRS two-component regulatory system K11930 torT; periplasmic protein TorT
D STM474_4743 putative glucosamine-fructose-6-phosphate aminotransferase K19504 gfrE; glucoselysine-6-phosphate deglycase
D STM474_4744 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K19510 gfrF; fructoselysine-6-phosphate deglycase
D STM474_2128 pduG; propanediol dehydratase reactivation protein K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D STM474_2129 pduH; propanediol dehydratase reactivation protein K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D STM474_4217 fdhD; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D STM474_0550 fdrA; membrane protein FdrA K02381 fdrA; FdrA protein
D STM474_2642 fdx; ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D STM474_2375 yfaE; 2Fe-2S ferredoxin YfaE K11107 yfaE; ferredoxin
D STM474_1462 ydgP; electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D STM474_1461 ydgQ; electron transport complex RsxE subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D STM474_1466 Na(+)-translocating NADH-quinone reductase subunit E K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D STM474_2981 hydN; electron transport protein K05796 hydN; electron transport protein HydN
D STM474_4054 mioC; flavodoxin K06205 mioC; MioC protein
D STM474_3192 fldB; flavodoxin FldB K03840 fldB; flavodoxin II
D STM474_2646 nifU; scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D STM474_0711 citB; citrate utilization protein b K13795 citB; citrate/tricarballylate utilization protein
D STM474_0712 tricarballylate dehydrogenase K13796 cobZ; tricarballylate dehydrogenase
D STM474_4635 cybC; soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D STM474_2990 hycB; formate hydrogenlyase subunit 2 K15827 hycB; formate hydrogenlyase subunit 2
D STM474_2989 hycC; formate hydrogenlyase subunit 3 K15828 hycC; formate hydrogenlyase subunit 3
D STM474_2988 hycD; hydrogenase 3 membrane subunit K15829 hycD; formate hydrogenlyase subunit 4
D STM474_2987 hycE; hydrogenase 3 large subunit K15830 hycE; formate hydrogenlyase subunit 5
D STM474_2986 hycF; formate hydrogenlyase complex iron-sulfur subunit K15831 hycF; formate hydrogenlyase subunit 6
D STM474_2985 hycG; hydrogenase K15832 hycG; formate hydrogenlyase subunit 7
D STM474_2978 anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D STM474_2356 napD; assembly protein for periplasmic nitrate reductase K02570 napD; periplasmic nitrate reductase NapD
D STM474_2357 napF; ferredoxin-type protein K02572 napF; ferredoxin-type protein NapF
D STM474_4477 nrfE; formate-dependent nitrite reductase K04016 nrfE; cytochrome c-type biogenesis protein NrfE
D STM474_4478 nrfG; formate-dependent nitrite reductase complex subunit NrfG K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D STM474_0715 fldA; flavodoxin FldA K03839 fldA; flavodoxin I
D STM474_2351 napC; cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC
D STM474_2354 napG; quinol dehydrogenase periplasmic component K02573 napG; ferredoxin-type protein NapG
D STM474_2353 napH; quinol dehydrogenase membrane component K02574 napH; ferredoxin-type protein NapH
D STM474_0079 fixA; protein FixA K03521 fixA; electron transfer flavoprotein beta subunit
D STM474_0881 putative electron transfer protein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D STM474_1356 ydiT; putative ferredoxin K03855 fixX; ferredoxin like protein
D STM474_0082 fixX; putative ferredoxin K03855 fixX; ferredoxin like protein
D STM474_4474 nrfB; cytochrome c-type protein NrfB K04013 nrfB; cytochrome c-type protein NrfB
D STM474_4475 nrfC; putative formate-dependent nitrite reductase K04014 nrfC; protein NrfC
D STM474_4476 nrfD; putative formate-dependent nitrate reductase K04015 nrfD; protein NrfD
D STM474_0584 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D STM474_4574 aidB; isovaleryl CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D STM474_2944 nrdI; ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D STM474_2531 cysZ; cysZ protein K06203 cysZ; CysZ protein
D STM474_2563 eutH; putative transport protein K04023 eutH; ethanolamine transporter
D STM474_2565 eutJ; putative ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D STM474_2558 eutK; ethanolamine utilization protein EutK K04025 eutK; ethanolamine utilization protein EutK
D STM474_2559 eutL; ethanolamine utilization protein EutL K04026 eutL; ethanolamine utilization protein EutL
D STM474_2567 eutN; putative detox protein K04028 eutN; ethanolamine utilization protein EutN
D STM474_2572 eutP; putative ethanolamine utilization protein K04029 eutP; ethanolamine utilization protein EutP
D STM474_2141 pduV; propanediol utilization protein K04029 eutP; ethanolamine utilization protein EutP
D STM474_2571 eutQ; putative ethanolamine utilization protein K04030 eutQ; ethanolamine utilization protein EutQ
D STM474_2573 eutS; putative carboxysome structural protein K04031 eutS; ethanolamine utilization protein EutS
D STM474_2140 pduU; putative propanediol utilization protein PduU K04031 eutS; ethanolamine utilization protein EutS
D STM474_0244 yaer; Uncharacterized protein yaeR K08234 yaeR; glyoxylase I family protein
D STM474_0120 leuL; leu operon leader peptide K05806 leuL; leu operon leader peptide
D STM474_1693 ycjI; murein peptide amidase A K14054 mpaA; murein peptide amidase A
D STM474_3248 yggS; pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
D STM474_3392 yhaN; putative inner membrane protein K26607 cyuA; putative L-cysteine desulfidase
C 99986 Glycan metabolism
D STM474_2197 wcaD; putative colanic acid biosynthesis protein K13620 wcaD; putative colanic acid polymerase
D STM474_2184 wcaM; putative colanic acid biosynthesis protein K16711 wcaM; colanic acid biosynthesis protein WcaM
D STM474_1724 yciS; inner membrane protein yciS K08992 lapA; lipopolysaccharide assembly protein A
D STM474_1723 tetratricopeptide repeat protein K19804 lapB; lipopolysaccharide assembly protein B
D STM474_0836 ybhn; Inner membrane protein ybhN K07027 K07027; glycosyltransferase 2 family protein
D STM474_3787 yhjN; cellulose synthase regulator protein K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D STM474_4113 hemY; putative protoheme IX biogenesis protein K02498 hemY; HemY protein
D STM474_4151 ubiB; putative ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D STM474_4150 yigP; putative inner membrane protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D STM474_3350 yqiC; putative cytoplasmic protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D STM474_3431 yhbT; putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D STM474_4172 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D STM474_2138 pduS; polyhedral body protein K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
D STM474_3325 sufI; repressor protein for FtsI K04753 sufI; suppressor of ftsI
D STM474_4029 yieF; YieF protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D STM474_3386 yqjF; putative membrane-associated protein K15977 K15977; putative oxidoreductase
D STM474_2764 yfiQ; putative acetyl-CoA synthetase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D STM474_2974 gutM; DNA-binding transcriptional activator GutM K02466 gutM; glucitol operon activator protein
D STM474_3523 yhcO; putative cytoplasmic protein K03623 yhcO; ribonuclease inhibitor
D STM474_3821 cspA; major cold shock protein K03704 cspA; cold shock protein
D STM474_0930 cspD; cold shock-like protein CspD K03704 cspA; cold shock protein
D STM474_1241 putative cold shock protein K03704 cspA; cold shock protein
D STM474_1859 cspC; cold shock-like protein CspC K03704 cspA; cold shock protein
D STM474_2028 cspB; putative cold-shock protein K03704 cspA; cold shock protein
D STM474_0650 cspE; cold shock-like protein K03704 cspA; cold shock protein
D STM474_4351 rsd; anti-RNA polymerase sigma 70 factor K07740 rsd; regulator of sigma D
D STM474_0001 thrL; Thr operon leader peptide K08278 thrL; thr operon leader peptide
D STM474_2991 hycA; formate hydrogenlyase regulatory protein HycA K15833 hycA; formate hydrogenlyase regulatory protein HycA
D STM474_2984 hycH; hydrogenase 3 large subunit processing protein K15834 hycH; formate hydrogenlyase maturation protein HycH
D STM474_0483 nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2
D STM474_3671 putative transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D STM474_3753 ABC transporter permease and ATP-binding protein K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D STM474_1660 hslJ; heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D STM474_0931 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D STM474_0468 tig; trigger factor K03545 tig; trigger factor
D STM474_3540 yedZ; putative sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D STM474_4213 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D STM474_2811 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D STM474_2995 hypC; hydrogenase assembly chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D STM474_1545 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D STM474_3293 hypG; hydrogenase 2 accessory protein HypG K04653 hypC; hydrogenase expression/formation protein HypC
D STM474_2996 hypD; hydrogenase isoenzyme formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D STM474_2997 hypE; putative hydrogenase formation protein K04655 hypE; hydrogenase expression/formation protein HypE
D STM474_2980 hypF; hydrogenase maturation protein K04656 hypF; hydrogenase maturation protein HypF
D STM474_2943 nrdH; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH
D STM474_4077 yifB; putative ATP-dependent protease K07391 comM; magnesium chelatase family protein
D STM474_3632 yhfA; OsmC family protein K07397 yhfA; putative redox protein
D STM474_3679 yhgI; putative DNA uptake protein K07400 nfuA; Fe/S biogenesis protein NfuA
D STM474_1403 sseA; secretion system chaperone protein K15367 sseA; secretion system chaperone SseA
D STM474_1402 ssaE; secretion system effector K18984 ssaE; secretion system chaperone SsaE
D STM474_1405 sscA; type III secretion low calcium response chaperone LcrH/SycD K15368 sscA; secretion system chaperone SscA
C 99976 Replication and repair
D STM474_0487 ybaZ; putative methylated-DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D STM474_3117 xni; exonuclease IX K01146 xni; protein Xni
D STM474_0168 putative restriction endonuclease K07453 K07453; putative restriction endonuclease
D STM474_3902 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D STM474_4148 yigN; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D STM474_0926 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D STM474_3422 yraN; putative endonuclease K07460 yraN; putative endonuclease
D STM474_3429 yhbQ; GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D STM474_3570 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D STM474_2847 putative competence protein K04096 smf; DNA processing protein
D STM474_0738 DNA recombinase K07357 fimB; type 1 fimbriae regulatory protein FimB
D STM474_2146 sbmC; DNA gyrase inhibitor K07470 sbmC; DNA gyrase inhibitor
D STM474_0949 ycaJ; recombination factor protein RarA K07478 ycaJ; putative ATPase
D STM474_3568 yrdD; putative DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D STM474_1004 putative replication protein K10762 ydaV; putative replication protein
D STM474_2873 bacteriophage P4 DNA primase K06919 K06919; putative DNA primase/helicase
D STM474_2880 putative inner membrane protein K06919 K06919; putative DNA primase/helicase
D STM474_p303 repA; replication protein A K07505 repA; regulatory protein RepA
D STM474_2903 putative transposase K07483 K07483; transposase
D STM474_p1081 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D STM474_1839 tnpA_2; transposase for IS200 K07491 rayT; REP-associated tyrosine transposase
D STM474_1988 tnpA_2; transposase for IS200 K07491 rayT; REP-associated tyrosine transposase
D STM474_0933 tnpA_2; transposase for IS200 K07491 rayT; REP-associated tyrosine transposase
D STM474_3454 tnpA_2; transposase for IS200 K07491 rayT; REP-associated tyrosine transposase
D STM474_1225 tnpA_2; transposase for IS200 K07491 rayT; REP-associated tyrosine transposase
D STM474_3646 tnpA_2; transposase for IS200 K07491 rayT; REP-associated tyrosine transposase
D STM474_2574 tnpA_2; transposase for IS200 K07491 rayT; REP-associated tyrosine transposase
D STM474_p1070 putative integrase protein K07494 K07494; putative transposase
D STM474_2708 putative virulence protein K07496 K07496; putative transposase
D STM474_2904 putative transposase K07497 K07497; putative transposase
D STM474_2900 putative transposase K07497 K07497; putative transposase
D STM474_0340 IS3 transposase K07497 K07497; putative transposase
D STM474_0934 putative integrase K07497 K07497; putative transposase
D STM474_2610 putative transposase K07497 K07497; putative transposase
D STM474_0310 putative transposase K07497 K07497; putative transposase
D STM474_0311 putative integrase core domain protein K07497 K07497; putative transposase
D STM474_2899 putative transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D STM474_1703 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D STM474_1700 pspD; peripheral inner membrane phage-shock protein K03971 pspD; phage shock protein D
D STM474_1699 pspe; Thiosulfate sulfurtransferase PspE K03972 pspE; phage shock protein E
D STM474_0505 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D STM474_2492 yfdC; inner membrane protein YfdC K21990 yfdC; formate-nitrite transporter family protein
D STM474_4194 yihO; GPH family transport protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D STM474_3924 yicJ; putative transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D STM474_4195 yihP; GPH family transport protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D STM474_4247 putative Na+/galactoside symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D STM474_0157 Na+/galactoside symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D STM474_4108 yifK; putative transport protein YifK K03293 TC.AAT; amino acid transporter, AAT family
D STM474_2665 yjdL; putative di-/tripeptide transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D STM474_3760 tripeptide permease TppB K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D STM474_1459 tppB; putative tripeptide transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D STM474_0732 PTR2-family transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D STM474_1122 putative sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D STM474_0006 yaaJ; putative alanine/glycine transport protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D STM474_0990 putative transcriptional regulator K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D STM474_0418 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D STM474_4385 putative Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D STM474_3317 putative membrane transport protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D STM474_0896 Regulator of K+ conductance domain-containing protein K07085 K07085; putative transport protein
D STM474_3983 yidE; putative potassium uptake protein TrkA K07085 K07085; putative transport protein
D STM474_2235 putative periplasmic protein K23243 rcnB; nickel/cobalt homeostasis protein
C 99978 Cell growth
D STM474_1752 yciB; intracellular septation protein A K06190 ispZ; intracellular septation protein
D STM474_3747 DcrB protein K27311 dcrB; inner membrane lipoprotein DcrB
D STM474_4596 ytfE; cell morphogenesis/cell wall metabolism regulator K07322 ytfE; regulator of cell morphogenesis and NO signaling
D STM474_1324 cedA; cell division modulator K15722 cedA; cell division activator
D STM474_1825 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D STM474_3878 yibP; M23 peptidase domain-containing protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D STM474_1204 hypothetical protein K07337 K07337; penicillin-binding protein activator
D STM474_1064 yccR; putative DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D STM474_0573 fimW; putative fimbrial protein K08087 fimW; fimbrial protein FimW
D STM474_0354 stbB; putative fimbrial chaperone K15540 ecpD; chaperone protein EcpD
D STM474_3112 syd; SecY interacting protein Syd K15723 syd; SecY interacting protein Syd
D STM474_3351 glgS; glycogen synthesis protein GlgS K22720 glgS; surface composition regulator
C 99995 Signaling proteins
D STM474_0155 ampE; regulatory protein AmpE K03807 ampE; AmpE protein
D STM474_1869 proQ; putative solute/DNA competence effector K03607 proQ; ProP effector
D STM474_p209 yafB; YafB protein K03607 proQ; ProP effector
D STM474_3759 uspA; universal stress protein A K06149 uspA; universal stress protein A
D STM474_1959 yecG; universal stress protein UspC K14064 uspC; universal stress protein C
D STM474_1674 ydaA; universal stress protein UspE K14055 uspE; universal stress protein E
D STM474_1664 universal stress protein K14061 uspF; universal stress protein F
D STM474_0634 ybdQ; putative universal stress protein K11932 uspG; universal stress protein G
D STM474_0620 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein
D STM474_4186 typA; GTP-binding protein K06207 typA; GTP-binding protein
D STM474_1120 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D STM474_0690 PhoH-like ATP-binding protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D STM474_1288 yeaG; putative serine protein kinase K07180 prkA; serine protein kinase
D STM474_3357 ygiM; putative signal transduction protein K07184 ygiM; SH3 domain protein
D STM474_4782 protein smp precursor K07186 smp; membrane protein
D STM474_1529 marB; Multiple antibiotic resistance protein K13630 marB; multiple antibiotic resistance protein MarB
D STM474_0455 yajQ; putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
D STM474_1688 oxidoreductase K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein
D STM474_3279 iraD; putative cytoplasmic protein K21637 iraD; anti-adapter protein IraD
D STM474_1102 Enhancing lycopene biosynthesis protein 1 K21638 iraM; anti-adapter protein IraM
C 99992 Structural proteins
D STM474_0948 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D STM474_1796 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D STM474_2491 vacJ; VacJ lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA
D STM474_4097 wzzE; lipopolysaccharide biosynthesis protein WzzE K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D STM474_1452 slyB; outer membrane lipoprotein SlyB precursor K06077 slyB; outer membrane lipoprotein SlyB
D STM474_0234 hlpA; periplasmic chaperone K06142 hlpA; outer membrane protein
D STM474_3065 nlpD; lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D STM474_3185 putative metalloendopeptidase K12943 ygeR; lipoprotein YgeR
D STM474_3439 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D STM474_1749 ompW; outer membrane protein W K07275 ompW; outer membrane protein
D STM474_1332 ydiY; putative outer membrane protein K07283 ydiY; putative salt-induced outer membrane protein
D STM474_1841 slp; outer membrane protein Slp K07285 slp; outer membrane lipoprotein
D STM474_0466 yajg; Uncharacterized lipoprotein yajG K07286 yajG; uncharacterized lipoprotein
D STM474_2205 asmA; putative assembly protein K07289 asmA; AsmA protein
D STM474_3779 AsmA family protein K07290 yhjG; AsmA family protein
D STM474_0521 ybbJ; inner membrane protein YbbJ K07340 ybbJ; inner membrane protein
D STM474_3754 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein
D STM474_1488 ydgG; inner membrane protein YdgG K11744 tqsA; AI-2 transport protein TqsA
D STM474_1720 osmB; lipoprotein K04062 osmB; osmotically inducible lipoprotein OsmB
D STM474_1316 osmE; DNA-binding transcriptional activator OsmE K04064 osmE; osmotically inducible lipoprotein OsmE
D STM474_4796 cred; Inner membrane protein creD K06143 creD; inner membrane protein
D STM474_3992 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D STM474_2346 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D STM474_3989 ccmH; putative heme lyase subunit K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D STM474_2343 ccmH; putative heme lyase subunit K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D STM474_2626 yfgA; helix-turn-helix domain protein K15539 rodZ; cytoskeleton protein RodZ
D STM474_3526 aaeX; protein AaeX K21695 aaeX; protein AaeX
D STM474_2124 pduB; propanediol utilization protein PduB K27263 pduB; bacterial microcompartment shell protein
D STM474_2130 pduJ; putative propanediol utilization protein PduJ K27266 pduJ; bacterial microcompartment shell protein
D STM474_2131 pduK; propanediol utilization protein K27267 pduK; bacterial microcompartment shell protein
D STM474_2133 pduM; propanediol utilization protein K27268 pduM; bacterial microcompartment assembly protein
D STM474_2134 pduN; polyhedral body protein K27269 pduN; bacterial microcompartment shell vertex protein
D STM474_2139 pduT; polyhedral body protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D STM474_4032 phoU; transcriptional regulator PhoU K02039 phoU; phosphate transport system protein
D STM474_1964 ftnB; ferritin-like protein K02255 ftnB; ferritin-like protein 2
D STM474_3609 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D STM474_1145 mdoG; glucans biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D STM474_4521 cutA; periplasmic divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D STM474_1940 cutC; copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D STM474_0093 apaG; ApaG protein K06195 apaG; ApaG protein
D STM474_4121 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D STM474_1786 ychN; putative sulfur reduction protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D STM474_2461 cvpA; colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D STM474_2060 Lytic enzyme K03791 K03791; putative chitinase
D STM474_1901 lytic enzyme K03791 K03791; putative chitinase
D STM474_3835 bax; putative exported amidase K03796 bax; Bax protein
D STM474_1056 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D STM474_1165 oxidoreductase family protein K03810 mviM; virulence factor
D STM474_2408 elaA; putative Acyl-CoA N-acyltransferase K02348 elaA; ElaA protein
D STM474_2766 yfiM; putative periplasmic lipoprotein K05811 yfiM; putative lipoprotein
D STM474_1787 chaB; cation transport regulator K06197 chaB; cation transport regulator
D STM474_4766 periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D STM474_1131 ycdX; putative hydrolase K04477 ycdX; putative hydrolase
D STM474_2759 yfiD; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D STM474_1771 rssa; NTE family protein rssA K07001 K07001; NTE family protein
D STM474_0213 yadR; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D STM474_1373 sufA; iron-sulfur cluster assembly scaffold protein K05997 sufA; Fe-S cluster assembly protein SufA
D STM474_1374 sufB; cysteine desulfurase activator complex subunit SufB K09014 sufB; Fe-S cluster assembly protein SufB
D STM474_1376 sufD; cysteine desulfurase activator complex subunit SufD K09015 sufD; Fe-S cluster assembly protein SufD
D STM474_0561 ybcI; putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D STM474_1326 ydjM; inner membrane protein YdjM K07038 K07038; inner membrane protein
D STM474_3717 Putative phosphotriesterase K07048 PTER; phosphotriesterase-related protein
D STM474_3777 yhjD; putative tRNA-processing ribonuclease K07058 K07058; membrane protein
D STM474_4204 rbn; ribonuclease BN K07058 K07058; membrane protein
D STM474_4524 fxsA; FxsA K07113 fxsA; UPF0716 protein FxsA
D STM474_1378 sufE; cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D STM474_3131 ygdK; putative FeS center assembly K02426 sufE; cysteine desulfuration protein SufE
D STM474_1151 ycea; UPF0176 protein yceA K07146 K07146; UPF0176 protein
D STM474_1231 hfld; putative High frequency lysogenization protein hflD K07153 hflD; high frequency lysogenization protein
D STM474_0072 caiE; carnitine operon protein CaiE K08279 caiE; carnitine operon protein CaiE
D STM474_4484 phnB; protein PhnB K04750 phnB; PhnB protein
D STM474_1148 msyb; Acidic protein msyB K12147 msyB; acidic protein MsyB
D STM474_4754 fhuF; ferric iron reductase involved in ferric hydroximate transport K13255 fhuF; ferric iron reductase protein FhuF
D STM474_3106 ygcY; putative D-glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein
D STM474_p1075 spvA; virulence outer membrane protein K19556 spvA; salmonella plasmid virulence protein A
D STM474_3620 slyX; slyX protein K03745 slyX; SlyX protein
D STM474_3569 smg; Protein smg K03747 smg; Smg protein
D STM474_4793 creA; protein CreA K05805 creA; CreA protein
D STM474_3240 sprT; protein SprT K02742 sprT; SprT protein
D STM474_2463 dedD; DedD protein K03749 dedD; DedD protein
D STM474_3652 damX; DamX protein K03112 damX; DamX protein
D STM474_2273 sanA; vancomycin resistance protein K03748 sanA; SanA protein
D STM474_2466 membrane protein, DedA family K03975 dedA; membrane-associated protein
D STM474_1055 pqiA; putative inner membrane protein K03808 pqiA; paraquat-inducible protein A
D STM474_1871 yebS; putative inner membrane protein K03808 pqiA; paraquat-inducible protein A
D STM474_2407 elaB; hypothetical protein K05594 elaB; ElaB protein
D STM474_3980 yidH; putative inner membrane protein K00389 yidH; putative membrane protein
D STM474_4571 yjfL; putative inner membrane protein K08989 K08989; putative membrane protein
D STM474_1697 hypothetical protein K08990 ycjF; putative membrane protein
D STM474_3740 yhhL; putative inner membrane protein K08993 yhhL; putative membrane protein
D STM474_1772 ychJ; Protein YchJ K09858 K09858; SEC-C motif domain protein
D STM474_0486 ybay; Uncharacterized lipoprotein ybaY K09914 K09914; putative lipoprotein
D STM474_1811 hyaF; hydrogenase-1 operon protein HyaF K03618 hyaF; hydrogenase-1 operon protein HyaF
D STM474_1543 putative hydrogenase K03618 hyaF; hydrogenase-1 operon protein HyaF
D STM474_1810 hydrogenase maturation protein K03619 hyaE; hydrogenase-1 operon protein HyaE
D STM474_1544 hydrogenase-1 operon protein HyaE2 K03619 hyaE; hydrogenase-1 operon protein HyaE
D STM474_4426 malM; maltose regulon periplasmic protein K05775 malM; maltose operon periplasmic protein
D STM474_4420 yjbA; phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE
D STM474_0407 arom; Protein AroM K14591 aroM; protein AroM
D STM474_4485 phnA; alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
D STM474_0585 Hypothetical secreted protein K21740 rclB; reactive chlorine resistance protein B
D STM474_0586 putative inner membrane protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D STM474_0039 putative arylsulfatase regulator K06871 K06871; uncharacterized protein
D STM474_4145 putative arylsulfatase regulator K06871 K06871; uncharacterized protein
D STM474_3978 yidF; putative cytoplasmic protein K06871 K06871; uncharacterized protein
D STM474_1291 arylsulfatase regulator K06871 K06871; uncharacterized protein
D STM474_1745 yciG; putative cytoplasmic protein K06884 K06884; uncharacterized protein
D STM474_1524 yciG; putative cytoplasmic protein K06884 K06884; uncharacterized protein
D STM474_1114 ymdF; putative cytoplasmic protein K06884 K06884; uncharacterized protein
D STM474_4711 putative cytoplasmic protein K06887 K06887; uncharacterized protein
D STM474_2651 putative hydrolase K06889 K06889; uncharacterized protein
D STM474_4577 yjfP; esterase K06889 K06889; uncharacterized protein
D STM474_0832 ybhL; putative permease K06890 K06890; uncharacterized protein
D STM474_0833 ybhM; putative integral membrane protein K06890 K06890; uncharacterized protein
D STM474_4042 putative permease K06890 K06890; uncharacterized protein
D STM474_2831 base plate tail-like protein K06903 W; Bacteriophage baseplate protein W
D STM474_4394 putative phage baseplate protein K06903 W; Bacteriophage baseplate protein W
D STM474_2818 late control-like protein K06905 D; Bacteriophage probable baseplate hub protein
D STM474_2796 gp26 phage protein K06905 D; Bacteriophage probable baseplate hub protein
D STM474_4400 putative cytoplasmic protein K06905 D; Bacteriophage probable baseplate hub protein
D STM474_2819 putative phage tail protein K06906 gpU; phage tail protein
D STM474_2795 gp25 phage protein K06906 gpU; phage tail protein
D STM474_2824 phage tail sheath-like protein K06907 FI; Bacteriophage tail sheath protein
D STM474_4407 putative phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D STM474_2823 phage tail fiber-like protein K06908 FII; Bacteriophage tail tube protein
D STM474_4406 putative phage tail core protein K06908 FII; Bacteriophage tail tube protein
D STM474_1698 ycjX; putative ATPase K06918 K06918; uncharacterized protein
D STM474_1070 CoA binding domain-containing protein K06929 K06929; uncharacterized protein
D STM474_3218 putative DNA-binding protein K06934 K06934; uncharacterized protein
D STM474_1445 ydhL; putative oxidoreductase K06938 K06938; uncharacterized protein
D STM474_1750 putative ferredoxin K06940 K06940; uncharacterized protein
D STM474_2302 yeiW; protein YeiW K06940 K06940; uncharacterized protein
D STM474_2024 yedj; Uncharacterized protein yedJ K06950 K06950; uncharacterized protein
D STM474_1372 putative Na+-dicarboxylate symporter K06956 K06956; uncharacterized protein
D STM474_1325 ydjN; kinase/transporter-like protein K06956 K06956; uncharacterized protein
D STM474_1627 putative nucleoside triphosphatase K06971 K06971; uncharacterized protein
D STM474_3276 putative cytoplasmic protein K06995 K06995; uncharacterized protein
D STM474_0428 Glyoxalase/bleomycin resistance protein K06996 K06996; uncharacterized protein
D STM474_3336 yqiA; esterase YqiA K07000 K07000; uncharacterized protein
D STM474_1207 ycfp; UPF0227 protein ycfP K07000 K07000; uncharacterized protein
D STM474_0720 putative cytoplasmic protein K07005 K07005; uncharacterized protein
D STM474_2321 yejM; putative hydrolase K07014 K07014; uncharacterized protein
D STM474_3629 hypothetical protein K07019 K07019; uncharacterized protein
D STM474_0009 yaah; Inner membrane protein yaaH K07034 K07034; uncharacterized protein
D STM474_1970 yeca; Uncharacterized protein yecA K07039 K07039; uncharacterized protein
D STM474_2589 putative inner membrane protein K07054 K07054; uncharacterized protein
D STM474_3622 yheV; putative cytoplasmic protein K07070 K07070; uncharacterized protein
D STM474_2447 yfcH; putative sugar nucleotide epimerase K07071 K07071; uncharacterized protein
D STM474_2481 yfcA; putative membrane protein K07090 K07090; uncharacterized protein
D STM474_2444 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein
D STM474_4602 hypothetical protein K07109 K07109; uncharacterized protein
D STM474_1997 yedE; putative inner membrane protein K07112 K07112; uncharacterized protein
D STM474_0752 abrB; putative transport protein K07120 K07120; uncharacterized protein
D STM474_3421 yraM; putative transglycosylase K07121 K07121; uncharacterized protein
D STM474_1776 TPR repeat-containing protein K07126 K07126; uncharacterized protein
D STM474_2087 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D STM474_0675 ybeQ; TPR repeat-containing protein K07126 K07126; uncharacterized protein
D STM474_4480 yjcO; TPR repeat-containing protein K07126 K07126; uncharacterized protein
D STM474_0458 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D STM474_0457 putative periplasmic protein K07126 K07126; uncharacterized protein
D STM474_1937 yecN; putative inner membrane protein K07136 K07136; uncharacterized protein
D STM474_3489 yhcC; putative FeS oxidoreductase K07139 K07139; uncharacterized protein
D STM474_1052 putative iron-sulfur protein K07140 K07140; MOSC domain-containing protein
D STM474_2281 yeib; Uncharacterized protein yeiB K07148 K07148; uncharacterized protein
D STM474_3264 yqgA; YqgA protein K07150 K07150; uncharacterized protein
D STM474_4019 yidd; UPF0161 protein yidD K08998 K08998; uncharacterized protein
D STM474_3250 yggU; putative cytoplasmic protein K09131 K09131; uncharacterized protein
D STM474_0657 ybed; UPF0250 protein ybeD K09158 K09158; uncharacterized protein
D STM474_1832 ycgN; putative cytoplasmic protein K09160 K09160; uncharacterized protein
D STM474_2432 yfbU; YfbU domain-containing protein K09161 K09161; uncharacterized protein
D STM474_1278 yaoF; putative hemolysin K09712 K09712; uncharacterized protein
D STM474_0404 yaiI; protein YaiI K09768 K09768; uncharacterized protein
D STM474_1755 yciI; YciI-like protein K09780 K09780; uncharacterized protein
D STM474_2020 yedi; Inner membrane protein yedI K09781 K09781; uncharacterized protein
D STM474_1287 yeah; UPF0229 protein yeaH K09786 K09786; uncharacterized protein
D STM474_0502 inner membrane protein K09790 K09790; uncharacterized protein
D STM474_0973 ycar; UPF0434 protein ycaR K09791 K09791; uncharacterized protein
D STM474_3879 yigQ; putative periplasmic protein K09798 K09798; uncharacterized protein
D STM474_2809 yfjF; protein YfjF K09801 K09801; uncharacterized protein
D STM474_2144 yeeX; protein YeeX K09802 K09802; uncharacterized protein
D STM474_4732 hypothetical protein K09803 K09803; uncharacterized protein
D STM474_3212 actin K09807 K09807; uncharacterized protein
D STM474_0927 ybjX; VirK-like protein K09824 virK; uncharacterized protein
D STM474_2915 virK; virulence protein K09824 virK; uncharacterized protein
D STM474_1057 ymbA; putative lipoprotein K09857 K09857; uncharacterized protein
D STM474_0005 yaaa; UPF0246 protein yaaA K09861 K09861; uncharacterized protein
D STM474_0145 conserved domain protein K09862 K09862; uncharacterized protein
D STM474_4355 yjaG; putative cytoplasmic protein K09891 K09891; uncharacterized protein
D STM474_4181 hypothetical protein K09894 K09894; uncharacterized protein
D STM474_3206 ygfB; putative cytoplasmic protein K09895 K09895; uncharacterized protein
D STM474_4174 putative cytoplasmic protein K09896 K09896; uncharacterized protein
D STM474_4076 yifE; protein yifE K09897 K09897; uncharacterized protein
D STM474_3630 putative phosphopyruvate hydratase K09898 K09898; uncharacterized protein
D STM474_2433 yfbV; putative inner membrane protein YfbV K09899 K09899; uncharacterized protein
D STM474_1758 yciu; UPF0263 protein yciU K09901 K09901; uncharacterized protein
D STM474_1834 ycgL; protein YcgL K09902 K09902; uncharacterized protein
D STM474_2320 yejL; protein yejL K09904 K09904; uncharacterized protein
D STM474_1941 yecM; protein YecM K09907 K09907; uncharacterized protein
D STM474_3507 yhcB; cytochrome d ubiquinol oxidase subunit III K09908 K09908; uncharacterized protein
D STM474_1069 ycct; UPF0319 protein yccT K09909 K09909; uncharacterized protein
D STM474_0169 yacl; UPF0231 protein yacL K09910 K09910; uncharacterized protein
D STM474_1061 ycbg; UPF0268 protein ycbG K09911 K09911; uncharacterized protein
D STM474_4382 putative cytoplasmic protein K09912 K09912; uncharacterized protein
D STM474_1164 yceH; protein YceH K09915 K09915; uncharacterized protein
D STM474_1296 yeaC; putative cytoplasmic protein K09916 K09916; uncharacterized protein
D STM474_1845 hypothetical protein K09917 K09917; uncharacterized protein
D STM474_1914 yebG; DNA damage-inducible protein YebG K09918 K09918; uncharacterized protein
D STM474_3338 yqib; Uncharacterized protein yqiB K09920 K09920; uncharacterized protein
D STM474_4125 yigA; protein yigA K09921 K09921; uncharacterized protein
D STM474_3256 yggL; putative cytoplasmic protein K09923 K09923; uncharacterized protein
D STM474_0972 ycaQ; putative cytoplasmic protein K09927 K09927; uncharacterized protein
D STM474_4562 hypothetical protein K09937 K09937; uncharacterized protein
D STM474_2528 putative cytoplasmic protein K09954 K09954; uncharacterized protein
D STM474_3851 putative cytoplasmic protein K09955 K09955; uncharacterized protein
D STM474_0517 ybaP; putative cytoplasmic protein K09973 K09973; uncharacterized protein
D STM474_4292 yijF; putative periplasmic protein K09974 K09974; uncharacterized protein
D STM474_1656 ydbL; putative secreted protein K09978 K09978; uncharacterized protein
D STM474_3428 yhbP; putative cytoplasmic protein K09979 K09979; uncharacterized protein
D STM474_4567 yjfI; putative cytoplasmic protein K09980 K09980; uncharacterized protein
D STM474_4700 protein YjhX 2 K09982 K09982; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 7, 2024