+E Replication protein KO
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DNA Replication Proteins - Sphingorhabdus sp. SMR4y
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D SPHFLASMR4Y_00059 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D SPHFLASMR4Y_01499 hpaIIM; modification methylase HpaII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D SPHFLASMR4Y_00953 hupB; DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D SPHFLASMR4Y_02628 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D SPHFLASMR4Y_03252 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SPHFLASMR4Y_02757 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SPHFLASMR4Y_00658 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SPHFLASMR4Y_01037 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SPHFLASMR4Y_00366 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SPHFLASMR4Y_03338 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E SPHFLASMR4Y_01071 dnaE2; DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E SPHFLASMR4Y_00573 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E SPHFLASMR4Y_01338 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E SPHFLASMR4Y_02278 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E SPHFLASMR4Y_00779 dnaX; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E SPHFLASMR4Y_02292 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E SPHFLASMR4Y_00956 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E SPHFLASMR4Y_00059 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E SPHFLASMR4Y_00638 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E SPHFLASMR4Y_02166 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E SPHFLASMR4Y_00600 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E SPHFLASMR4Y_00059 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E SPHFLASMR4Y_00638 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
C SPHFLASMR4Y_01013 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C SPHFLASMR4Y_01927 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C SPHFLASMR4Y_02837 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C SPHFLASMR4Y_01175 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C SPHFLASMR4Y_00826 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C SPHFLASMR4Y_03182 eukaryotic DNA topoisomerase I, catalytic core K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022