+D GENES KO #

  KEGG Orthology (KO) - Candidatus Karelsulcia muelleri DMIN

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:smh00010] D DMIN_02520 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DMIN_02490 pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DMIN_02070 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DMIN_02500 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component-related enzyme K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01550 Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DMIN_00450 Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] C 00020 Citrate cycle (TCA cycle) [PATH:smh00020] D DMIN_01810 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DMIN_01820 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01550 Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DMIN_00450 Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DMIN_01500 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DMIN_00770 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DMIN_02490 pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DMIN_02070 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DMIN_02500 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component-related enzyme K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway D DMIN_00270 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] C 00040 Pentose and glucuronate interconversions C 00051 Fructose and mannose metabolism C 00052 Galactose metabolism C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism C 00520 Amino sugar and nucleotide sugar metabolism C 00620 Pyruvate metabolism [PATH:smh00620] D DMIN_01550 Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DMIN_00450 Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DMIN_02490 pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DMIN_02070 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DMIN_02500 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component-related enzyme K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01410 Malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DMIN_00410 Isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:smh00640] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_00770 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DMIN_01500 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:smh00650] D DMIN_01550 Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DMIN_00450 Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DMIN_02590 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:smh00660] D DMIN_02590 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DMIN_00770 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DMIN_01500 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DMIN_00400 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DMIN_00390 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DMIN_00380 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:smh00190] D DMIN_00090 NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D DMIN_01440 cytochrome c oxidase, cbb3-type, subunit I/cytochrome c oxidase, cbb3-type, subunit II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9] D DMIN_01430 Cytochrome c, mono- and diheme variant K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D DMIN_00310 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DMIN_00170 ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DMIN_00300 F0F1-type ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DMIN_00350 F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DMIN_00330 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DMIN_00340 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism C 00910 Nitrogen metabolism C 00920 Sulfur metabolism B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:smh00061] D DMIN_00150 acyl carrier protein K02078 acpP; acyl carrier protein D DMIN_00140 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism C 00564 Glycerophospholipid metabolism C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism D DMIN_00270 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] C 00240 Pyrimidine metabolism D DMIN_01090 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DMIN_01080 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:smh00250] D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DMIN_01050 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DMIN_02470 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DMIN_02450 NAD-dependent aldehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D DMIN_01090 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DMIN_01080 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] C 00260 Glycine, serine and threonine metabolism [PATH:smh00260] D DMIN_00360 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DMIN_01370 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D DMIN_01970 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DMIN_01360 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D DMIN_01350 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_02560 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DMIN_01170 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DMIN_01180 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:smh00270] D DMIN_00360 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DMIN_01370 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D DMIN_01970 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DMIN_00940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00280 Valine, leucine and isoleucine degradation [PATH:smh00280] D DMIN_00940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:smh00290] D DMIN_02560 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DMIN_00400 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DMIN_00390 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DMIN_00380 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D DMIN_02590 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DMIN_02570 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DMIN_02600 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DMIN_00940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DMIN_00410 Isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:smh00300] D DMIN_00360 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DMIN_01370 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D DMIN_01970 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DMIN_01710 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DMIN_01730 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D DMIN_00930 Tetrahydrodipicolinate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D DMIN_01070 Ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DMIN_02430 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DMIN_01260 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00310 Lysine degradation [PATH:smh00310] D DMIN_01820 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:smh00220] D DMIN_01050 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DMIN_02470 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DMIN_01110 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D DMIN_01060 N-acetyl-gamma-glutamyl-phosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D DMIN_01070 Ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DMIN_01120 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-related deacylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:smh00330] D DMIN_02450 NAD-dependent aldehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D DMIN_01820 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:smh00400] D DMIN_00060 3-dehydroquinate synthetase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D DMIN_00130 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D DMIN_01150 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D DMIN_02000 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D DMIN_01280 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D DMIN_01220 Anthranilate/para-aminobenzoate synthases component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DMIN_01210 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DMIN_01200 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D DMIN_01180 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DMIN_01190 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D DMIN_01170 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DMIN_01950 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K04516 AROA1; chorismate mutase [EC:5.4.99.5] D DMIN_01960 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism D DMIN_01930 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] C 00460 Cyanoamino acid metabolism C 00470 D-Amino acid metabolism [PATH:smh00470] D DMIN_02430 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DMIN_01260 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism D DMIN_01230 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 00740 Riboflavin metabolism C 00750 Vitamin B6 metabolism D DMIN_01350 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism C 00770 Pantothenate and CoA biosynthesis [PATH:smh00770] D DMIN_02590 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DMIN_02570 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DMIN_02600 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DMIN_00940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:smh00780] D DMIN_00140 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] C 00785 Lipoic acid metabolism [PATH:smh00785] D DMIN_00010 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D DMIN_01480 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_02490 pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DMIN_02070 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DMIN_02500 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component-related enzyme K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DMIN_01810 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DMIN_01820 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis C 00670 One carbon pool by folate C 00830 Retinol metabolism C 00860 Porphyrin metabolism C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:smh00130] D DMIN_02120 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D DMIN_01340 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis D DMIN_00710 Geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:smh00261] D DMIN_00360 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DMIN_01370 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D DMIN_01970 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DMIN_01710 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DMIN_01730 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D DMIN_01220 Anthranilate/para-aminobenzoate synthases component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DMIN_01210 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D DMIN_00150 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:smh03020] D DMIN_00540 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DMIN_00530 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DMIN_02410 DNA-directed RNA polymerase, alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:smh03010] D DMIN_00080 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DMIN_00840 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D DMIN_02240 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D DMIN_02400 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D DMIN_02330 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D DMIN_01670 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DMIN_02150 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D DMIN_02300 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D DMIN_00850 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D DMIN_02170 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D DMIN_02390 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D DMIN_02140 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D DMIN_02380 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D DMIN_02290 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D DMIN_02110 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D DMIN_02010 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DMIN_02260 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D DMIN_01680 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DMIN_02220 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D DMIN_01980 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D DMIN_00560 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D DMIN_02210 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D DMIN_02180 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D DMIN_02190 Ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DMIN_02280 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D DMIN_02310 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D DMIN_00550 Ribosomal protein L10;Ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DMIN_00570 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D DMIN_00860 ribosomal protein L13, bacterial type K02871 RP-L13; large subunit ribosomal protein L13 D DMIN_02270 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D DMIN_02340 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D DMIN_02250 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D DMIN_02420 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D DMIN_02320 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D DMIN_01320 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D DMIN_00900 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D DMIN_01640 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DMIN_02230 Ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DMIN_00280 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D DMIN_01650 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D DMIN_00470 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D DMIN_02130 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D DMIN_02060 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DMIN_00480 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D DMIN_01490 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D DMIN_00890 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D DMIN_02370 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D DMIN_00720 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DMIN_00750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DMIN_00760 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:smh00970] D DMIN_00740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DMIN_01660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DMIN_01380 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DMIN_02480 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DMIN_00210 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DMIN_01130 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DMIN_00260 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DMIN_02020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DMIN_01990 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DMIN_00610 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DMIN_00820 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DMIN_00500 tRNA-His K14226 tRNA-His; tRNA His D DMIN_00730 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DMIN_00830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DMIN_01780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DMIN_01520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DMIN_01530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DMIN_01140 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DMIN_00190 tRNA-Met K14230 tRNA-Met; tRNA Met D DMIN_01630 tRNA-Met K14230 tRNA-Met; tRNA Met D DMIN_01800 tRNA-Met K14230 tRNA-Met; tRNA Met D DMIN_00440 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DMIN_01390 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DMIN_01620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DMIN_01270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DMIN_01400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DMIN_00600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DMIN_00630 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DMIN_00580 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DMIN_00620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DMIN_01030 tRNA-Val K14237 tRNA-Val; tRNA Val D DMIN_00220 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DMIN_01610 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DMIN_00460 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DMIN_00020 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DMIN_00430 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DMIN_01240 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DMIN_02550 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DMIN_00050 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DMIN_00420 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DMIN_01570 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:smh03060] D DMIN_02350 Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DMIN_01310 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DMIN_00780 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DMIN_01830 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D DMIN_01740 ribosomal protein S21/signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89] D DMIN_00200 Signal peptidase (SPase) II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:smh04122] D DMIN_01230 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DMIN_00960 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:smh03018] D DMIN_02100 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DMIN_00100 Transcription termination factor K03628 rho; transcription termination factor Rho D DMIN_00870 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DMIN_01870 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DMIN_00950 uncharacterized domain HDIG K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:smh03030] D DMIN_01040 DNA-directed DNA polymerase III (polc) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DMIN_00040 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] C 03410 Base excision repair C 03420 Nucleotide excision repair C 03430 Mismatch repair [PATH:smh03430] D DMIN_00810 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DMIN_02460 DNA mismatch repair enzyme (predicted ATPase) K03572 mutL; DNA mismatch repair protein MutL D DMIN_01040 DNA-directed DNA polymerase III (polc) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DMIN_00040 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] C 03440 Homologous recombination D DMIN_01040 DNA-directed DNA polymerase III (polc) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DMIN_00040 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:smh03070] D DMIN_02350 Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DMIN_01310 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DMIN_00780 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DMIN_01830 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:smh02020] D DMIN_01440 cytochrome c oxidase, cbb3-type, subunit I/cytochrome c oxidase, cbb3-type, subunit II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9] D DMIN_01430 Cytochrome c, mono- and diheme variant K00406 ccoP; cytochrome c oxidase cbb3-type subunit III C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:smh02024] D DMIN_01220 Anthranilate/para-aminobenzoate synthases component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DMIN_01210 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DMIN_02350 Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DMIN_01310 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D DMIN_02090 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:smh01000] C 01001 Protein kinases C 01009 Protein phosphatases and associated proteins [BR:smh01009] D DMIN_01290 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:smh01002] D DMIN_00200 Signal peptidase (SPase) II K03101 lspA; signal peptidase II [EC:3.4.23.36] D DMIN_01510 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D DMIN_00030 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DMIN_00790 Protease subunit of ATP-dependent Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D DMIN_01250 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DMIN_01740 ribosomal protein S21/signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89] C 01003 Glycosyltransferases C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins C 01004 Lipid biosynthesis proteins [BR:smh01004] D DMIN_00140 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:smh01006] D DMIN_00710 Geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D DMIN_01340 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:smh01007] D DMIN_00220 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DMIN_00420 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DMIN_01570 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DMIN_00020 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DMIN_00430 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DMIN_01610 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DMIN_00460 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DMIN_01240 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DMIN_02550 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DMIN_00050 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DMIN_02050 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DMIN_01070 Ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DMIN_00940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:smh00194] D DMIN_00170 ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DMIN_00300 F0F1-type ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DMIN_00310 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DMIN_00330 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DMIN_00340 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DMIN_00350 F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors C 03021 Transcription machinery [BR:smh03021] D DMIN_02410 DNA-directed RNA polymerase, alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DMIN_00540 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DMIN_00530 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DMIN_02090 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D DMIN_00100 Transcription termination factor K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:smh03019] D DMIN_02100 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DMIN_00100 Transcription termination factor K03628 rho; transcription termination factor Rho D DMIN_00870 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DMIN_01870 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DMIN_00950 uncharacterized domain HDIG K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:smh03011] D DMIN_00080 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DMIN_00840 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D DMIN_02240 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D DMIN_02400 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D DMIN_02330 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D DMIN_01670 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DMIN_02150 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D DMIN_02300 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D DMIN_00850 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D DMIN_02170 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D DMIN_02390 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D DMIN_02140 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D DMIN_02380 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D DMIN_02290 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D DMIN_02110 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D DMIN_02010 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DMIN_02260 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D DMIN_01680 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DMIN_02220 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D DMIN_01980 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D DMIN_00560 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D DMIN_02210 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D DMIN_02180 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D DMIN_02190 Ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DMIN_02280 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D DMIN_02310 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D DMIN_00570 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D DMIN_00550 Ribosomal protein L10;Ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DMIN_00860 ribosomal protein L13, bacterial type K02871 RP-L13; large subunit ribosomal protein L13 D DMIN_02270 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D DMIN_02340 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D DMIN_02250 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D DMIN_02420 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D DMIN_02320 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D DMIN_01320 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D DMIN_00900 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D DMIN_01640 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DMIN_02230 Ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DMIN_01650 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D DMIN_00470 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D DMIN_02130 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D DMIN_02060 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DMIN_00480 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D DMIN_01490 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D DMIN_00890 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D DMIN_02370 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D DMIN_00280 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D DMIN_00760 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DMIN_00720 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DMIN_00750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:smh03009] D DMIN_01760 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D DMIN_00180 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D DMIN_02040 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DMIN_02440 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D DMIN_00250 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D DMIN_02540 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D DMIN_00510 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DMIN_00920 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D DMIN_01470 ribosome-associated GTPase EngA K03977 engA; GTPase D DMIN_01010 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D DMIN_00240 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor C 03016 Transfer RNA biogenesis [BR:smh03016] D DMIN_01240 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DMIN_00430 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DMIN_00220 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DMIN_01610 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DMIN_00460 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DMIN_00020 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DMIN_02550 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DMIN_00050 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DMIN_00420 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DMIN_01570 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DMIN_00520 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D DMIN_01230 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DMIN_01020 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D DMIN_00230 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DMIN_01890 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D DMIN_01300 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D DMIN_00960 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DMIN_01160 tRNA(Ile)-lysidine synthetase, N-terminal domain protein/tRNA(Ile)-lysidine synthetase, C-terminal domain protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D DMIN_02100 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:smh03012] D DMIN_01940 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DMIN_00880 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D DMIN_00590 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DMIN_02160 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D DMIN_00110 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D DMIN_02360 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D DMIN_01720 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:smh03110] D DMIN_00800 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D DMIN_01290 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D DMIN_00870 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DMIN_01870 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DMIN_00970 DnaJ-class molecular chaperone with C-terminal Zn finger domain protein K03686 dnaJ; molecular chaperone DnaJ D DMIN_00980 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D DMIN_01880 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES D DMIN_00030 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DMIN_00350 F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a C 04131 Membrane trafficking [BR:smh04131] D DMIN_02520 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DMIN_01290 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:smh03051] D DMIN_01290 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:smh03032] D DMIN_01040 DNA-directed DNA polymerase III (polc) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DMIN_00040 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DMIN_00070 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DMIN_02030 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] C 03036 Chromosome and associated proteins [BR:smh03036] D DMIN_00230 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DMIN_02040 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DMIN_01560 ATPases involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:smh03400] D DMIN_00540 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DMIN_00530 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DMIN_02410 DNA-directed RNA polymerase, alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DMIN_00810 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DMIN_02460 DNA mismatch repair enzyme (predicted ATPase) K03572 mutL; DNA mismatch repair protein MutL D DMIN_01040 DNA-directed DNA polymerase III (polc) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DMIN_00040 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DMIN_00070 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DMIN_02030 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] C 03029 Mitochondrial biogenesis [BR:smh03029] D DMIN_01940 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DMIN_00880 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D DMIN_00590 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DMIN_02160 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D DMIN_00420 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DMIN_00430 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DMIN_01600 Outer membrane protein/protective antigen OMA87 K07277 SAM50; outer membrane protein insertion porin family D DMIN_00870 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DMIN_00980 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D DMIN_01870 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DMIN_01880 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES D DMIN_00970 DnaJ-class molecular chaperone with C-terminal Zn finger domain protein K03686 dnaJ; molecular chaperone DnaJ D DMIN_01230 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DMIN_01560 ATPases involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D DMIN_01290 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:smh02000] D DMIN_01910 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D DMIN_01600 Outer membrane protein/protective antigen OMA87 K07277 SAM50; outer membrane protein insertion porin family D DMIN_00370 Multiple antibiotic transporter K05595 marC; multiple antibiotic resistance protein C 02044 Secretion system [BR:smh02044] D DMIN_01310 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DMIN_02350 Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DMIN_00780 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D DMIN_01830 Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins C 04147 Exosome [BR:smh04147] D DMIN_01290 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D DMIN_02520 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DMIN_01870 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DMIN_00870 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DMIN_00590 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D DMIN_02470 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DMIN_01050 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DMIN_00990 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DMIN_01770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 02048 Prokaryotic defense system [BR:smh02048] D DMIN_01230 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:smh03100] D DMIN_00740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DMIN_01660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DMIN_01380 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DMIN_02480 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DMIN_00210 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DMIN_01130 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DMIN_00260 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DMIN_02020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DMIN_01990 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DMIN_00610 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DMIN_00820 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DMIN_00500 tRNA-His K14226 tRNA-His; tRNA His D DMIN_00730 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DMIN_00830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DMIN_01780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DMIN_01520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DMIN_01530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DMIN_01140 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DMIN_00190 tRNA-Met K14230 tRNA-Met; tRNA Met D DMIN_01630 tRNA-Met K14230 tRNA-Met; tRNA Met D DMIN_01800 tRNA-Met K14230 tRNA-Met; tRNA Met D DMIN_00440 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DMIN_01390 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DMIN_01620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DMIN_01270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DMIN_01400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DMIN_00600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DMIN_00630 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DMIN_00580 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DMIN_00620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DMIN_01030 tRNA-Val K14237 tRNA-Val; tRNA Val D DMIN_00720 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DMIN_00750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DMIN_00760 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DMIN_167 tmRNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D DMIN_01100 ornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11] D DMIN_00290 Prolipoprotein diacylglyceryltransferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D DMIN_00910 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] C 99981 Carbohydrate metabolism C 99982 Energy metabolism C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D DMIN_01840 SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins C 99992 Structural proteins C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D DMIN_01900 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB D DMIN_01920 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 sufD; Fe-S cluster assembly protein SufD D DMIN_00700 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE C 99997 Function unknown ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024