+D GENES KO
#
KEGG Orthology (KO) - Staphylothermus marinus
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:smr00010]
D Smar_1514 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Smar_1156 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Smar_1596 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Smar_0902 D-fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Smar_0901 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Smar_0241 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D Smar_0240 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Smar_0332 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Smar_1274 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Smar_0899 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Smar_0141 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1449 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_0998 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_1450 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_0997 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_1447 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1000 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1448 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0999 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_1444 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Smar_1443 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Smar_1072 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Smar_0696 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Smar_0045 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Smar_0449 acetyl-CoA synthetase (ADP-forming) alpha subunit / branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Smar_1241 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Smar_1242 branched-chain acyl-CoA synthetase (ADP-forming) beta subunit / acetyl-CoA synthetase (ADP-forming) beta subunit K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Smar_1286 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Smar_1582 glyceraldehyde-3-phosphate ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6]
D Smar_0084 nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90]
C 00020 Citrate cycle (TCA cycle) [PATH:smr00020]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1444 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Smar_1443 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Smar_0471 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Smar_0470 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Smar_0341 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Smar_1449 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_0998 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_1450 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_0997 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_1447 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1000 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1448 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0999 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:smr00030]
D Smar_1156 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Smar_0990 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Smar_0492 Orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D Smar_0385 hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D Smar_0331 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Smar_1455 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K22199 ppm; phosphopentomutase [EC:5.4.2.7]
D Smar_1286 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Smar_0007 6-phosphofructokinase / inosine-guanosine kinase / cytidine kinase K26208 E2.7.1.239; alpha-D-ribose-1-phosphate 5-kinase (ATP) [EC:2.7.1.239]
D Smar_1357 ribose 1,5-bisphosphate isomerase K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29]
D Smar_1238 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Smar_0084 nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90]
D Smar_0668 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Smar_1199 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Smar_0737 MOFRL domain protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Smar_1596 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Smar_0902 D-fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
C 00040 Pentose and glucuronate interconversions
D Smar_1169 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:smr00051]
D Smar_1156 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Smar_1286 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Smar_0201 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Smar_0121 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Smar_1169 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Smar_0498 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D Smar_0499 mannosyl-3-phosphoglycerate phosphatase family K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D Smar_1596 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Smar_0902 D-fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Smar_0901 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:smr00052]
D Smar_1153 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D Smar_1154 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Smar_0290 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Smar_1286 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Smar_1514 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:smr00500]
D Smar_1391 glycoside hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Smar_1393 glycosyl transferase, group 1 K00703 glgA; starch synthase [EC:2.4.1.21]
D Smar_0246 glycosyl transferase, group 1 K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Smar_1389 glycoside hydrolase, family 57 K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D Smar_0613 alpha amylase, catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Smar_1392 glycoside hydrolase, family 57 K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Smar_1388 Uncharacterized protein probably involved in trehalose biosynthesis-like protein K16146 pep2; maltokinase [EC:2.7.1.175]
D Smar_0085 glycosyl transferase, group 1 K13057 treT; trehalose synthase [EC:2.4.1.245]
D Smar_1286 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Smar_1514 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Smar_1156 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:smr00520]
D Smar_1521 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Smar_0782 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Smar_1520 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Smar_0849 Nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D Smar_1514 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Smar_1286 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Smar_1153 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D Smar_1154 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Smar_0290 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Smar_1156 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Smar_0201 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Smar_0121 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:smr00620]
D Smar_1449 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_0998 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_1450 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_0997 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_1447 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1000 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1448 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0999 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_1444 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Smar_1443 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1072 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Smar_0696 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Smar_0045 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Smar_0899 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Smar_0449 acetyl-CoA synthetase (ADP-forming) alpha subunit / branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Smar_1241 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Smar_1242 branched-chain acyl-CoA synthetase (ADP-forming) beta subunit / acetyl-CoA synthetase (ADP-forming) beta subunit K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Smar_1504 oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Smar_0341 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Smar_0141 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:smr00630]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Smar_1427 biotin/lipoyl attachment domain-containing protein K15037 K15037; biotin carboxyl carrier protein
D Smar_0798 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Smar_0530 phosphatases-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Smar_1152 SPP-like hydrolase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18]
D Smar_1051 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Smar_0183 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Smar_1110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Smar_1113 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Smar_1114 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Smar_1112 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1109 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Smar_0702 hypothetical protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Smar_0737 MOFRL domain protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:smr00640]
D Smar_0449 acetyl-CoA synthetase (ADP-forming) alpha subunit / branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Smar_1241 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Smar_1242 branched-chain acyl-CoA synthetase (ADP-forming) beta subunit / acetyl-CoA synthetase (ADP-forming) beta subunit K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1449 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_0998 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_1450 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_0997 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_1447 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1000 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1448 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0999 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_1427 biotin/lipoyl attachment domain-containing protein K15037 K15037; biotin carboxyl carrier protein
D Smar_1591 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Smar_0470 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Smar_0471 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:smr00650]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Smar_1504 oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Smar_1503 oxaloacetate decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Smar_1591 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Smar_1449 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_0998 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_1450 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_0997 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_1447 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1000 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1448 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0999 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_1444 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Smar_1443 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Smar_1335 putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00660 C5-Branched dibasic acid metabolism
D Smar_0470 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Smar_0471 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:smr00562]
D Smar_0548 D-fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Smar_0298 L-myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Smar_0901 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:smr00190]
D Smar_0646 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Smar_0648 Membrane bound protein complex subunit mbxL K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Smar_0030 respiratory-chain NADH dehydrogenase, subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Smar_0657 respiratory-chain NADH dehydrogenase, subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Smar_1171 H+-transporting two-sector ATPase, alpha/beta subunit, central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D Smar_1170 H+-transporting two-sector ATPase, alpha/beta subunit, central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D Smar_1179 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D Smar_1174 H+-transporting two-sector ATPase, E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D Smar_1177 conserved hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D Smar_1176 V-type ATPase, 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D Smar_1175 H+-transporting two-sector ATPase, C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D Smar_0473 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes [PATH:smr00720]
D Smar_1449 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_0998 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_1450 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_0997 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_1447 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1000 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1448 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0999 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0141 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Smar_0341 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Smar_0471 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Smar_0470 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Smar_1444 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Smar_1443 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Smar_1427 biotin/lipoyl attachment domain-containing protein K15037 K15037; biotin carboxyl carrier protein
C 00680 Methane metabolism [PATH:smr00680]
D Smar_1110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Smar_0737 MOFRL domain protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Smar_1274 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Smar_1596 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Smar_0902 D-fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Smar_0385 hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D Smar_0492 Orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D Smar_0413 Tetrahydromethanopterin S-methyltransferase, MtrH subunit K00584 mtrH; tetrahydromethanopterin S-methyltransferase subunit H [EC:7.2.1.4]
D Smar_1449 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_0998 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_1450 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_0997 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_1447 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1000 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1448 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0999 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0141 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Smar_0332 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Smar_0554 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Smar_0415 cobalamin B12-binding domain protein K16179 mtbC; dimethylamine corrinoid protein
D Smar_1292 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00910 Nitrogen metabolism [PATH:smr00910]
D Smar_0497 glutamate dehydrogenase (NADP) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Smar_0183 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Smar_1055 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Smar_0235 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:smr00920]
D Smar_0071 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Smar_0072 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Smar_0337 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Smar_0339 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Smar_1007 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Smar_0354 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:smr00061]
D Smar_0561 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Smar_0677 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:smr00071]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Smar_1072 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Smar_0696 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Smar_0045 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:smr00561]
D Smar_0737 MOFRL domain protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Smar_0264 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
C 00564 Glycerophospholipid metabolism [PATH:smr00564]
D Smar_0258 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Smar_0685 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Smar_0261 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Smar_0701 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Smar_0939 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D Smar_0993 geranylgeranylglyceryl diphosphate synthase K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41]
D Smar_1155 geranylgeranylglycerol-phosphate geranylgeranyltransferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D Smar_0617 protein of unknown function DUF46 K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67]
D Smar_1462 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:smr00230]
D Smar_1181 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Smar_1455 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K22199 ppm; phosphopentomutase [EC:5.4.2.7]
D Smar_1286 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Smar_1238 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Smar_1525 Protein of unknown function DUF1297 K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D Smar_0828 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Smar_1246 protein of unknown function DUF84 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D Smar_0840 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Smar_1080 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Smar_1193 putative adenylyl cyclase CyaB K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D Smar_0382 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D Smar_0398 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Smar_0791 conserved hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D Smar_1253 protein of unknown function DUF265 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D Smar_0973 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D Smar_0339 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Smar_0337 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Smar_0235 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:smr00240]
D Smar_0601 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Smar_0600 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D Smar_0598 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Smar_0597 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Smar_0599 dihydroorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Smar_0602 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Smar_0603 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Smar_0781 uridylate kinase, putative K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Smar_0828 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Smar_0734 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Smar_0604 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Smar_1045 cytidylate kinase, putative K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Smar_0465 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D Smar_0174 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Smar_0069 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Smar_1080 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Smar_1077 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Smar_0624 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Smar_1203 deoxyUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Smar_1078 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Smar_0238 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:smr00250]
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Smar_1517 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Smar_0601 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Smar_0600 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D Smar_1591 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Smar_1055 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Smar_0497 glutamate dehydrogenase (NADP) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Smar_0183 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Smar_0782 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Smar_1520 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:smr00260]
D Smar_0884 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Smar_0185 transcriptional regulator K01733 thrC; threonine synthase [EC:4.2.3.1]
D Smar_0094 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Smar_1110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Smar_0737 MOFRL domain protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Smar_0332 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Smar_0554 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Smar_1113 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Smar_1114 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Smar_1112 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1109 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Smar_0525 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Smar_0098 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:smr00270]
D Smar_0354 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Smar_0416 Methionine synthase II (cobalamin-independent)-like protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Smar_1298 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Smar_0500 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Smar_1454 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Smar_1437 spermine synthase / spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Smar_0518 purine and other phosphorylases, family 1 K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D Smar_0749 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D Smar_0216 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Smar_0236 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Smar_0919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Smar_0929 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Smar_0554 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Smar_0555 ParB domain protein nuclease K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226]
C 00280 Valine, leucine and isoleucine degradation [PATH:smr00280]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1427 biotin/lipoyl attachment domain-containing protein K15037 K15037; biotin carboxyl carrier protein
D Smar_0243 6-phosphogluconate dehydrogenase, NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Smar_1335 putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
D Smar_0525 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00300 Lysine biosynthesis [PATH:smr00300]
D Smar_0138 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Smar_1339 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
C 00310 Lysine degradation [PATH:smr00310]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:smr00220]
D Smar_0224 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Smar_0183 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Smar_0497 glutamate dehydrogenase (NADP) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Smar_0235 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:smr00330]
D Smar_0732 Uncharacterized protein putative amidase-like protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Smar_0204 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Smar_1135 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Smar_1437 spermine synthase / spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Smar_0500 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Smar_1454 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism [PATH:smr00350]
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Smar_1292 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D Smar_1072 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Smar_0696 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Smar_0045 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism [PATH:smr00380]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:smr00400]
D Smar_0098 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:smr00410]
D Smar_1292 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D Smar_1591 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Smar_1379 pantothenate synthetase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D Smar_0238 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
C 00430 Taurine and hypotaurine metabolism
D Smar_1215 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:smr00450]
D Smar_0416 Methionine synthase II (cobalamin-independent)-like protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Smar_0379 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Smar_0683 aminotransferase, class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Smar_0928 thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Smar_0337 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Smar_1511 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:smr00460]
D Smar_1391 glycoside hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Smar_1215 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Smar_1517 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Smar_1110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism
C 00480 Glutathione metabolism [PATH:smr00480]
D Smar_1215 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Smar_0166 peptidase M17, leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Smar_1437 spermine synthase / spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:smr00511]
D Smar_0014 glycosyl hydrolases 38 domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Smar_1142 glycoside hydrolase, family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:smr00730]
D Smar_0049 phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D Smar_0447 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Smar_0052 thiazole biosynthesis enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D Smar_0180 Flavoprotein involved in thiazole biosynthesis-like protein K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D Smar_1576 AIR synthase related protein domain protein K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Smar_1253 protein of unknown function DUF265 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D Smar_0398 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Smar_0054 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:smr00740]
D Smar_0486 GTP cyclohydrolase IIa K08096 gch3; GTP cyclohydrolase IIa [EC:3.5.4.29]
D Smar_0461 bifunctional deaminase-reductase domain protein K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302]
D Smar_0489 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D Smar_0487 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Smar_0488 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Smar_1200 protein of unknown function DUF120 K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161]
D Smar_0203 Glycerol-3-phosphate cytidylyltransferase K14656 ribL; FAD synthetase [EC:2.7.7.2]
D Smar_1181 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Smar_1127 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:smr00750]
D Smar_0884 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Smar_0185 transcriptional regulator K01733 thrC; threonine synthase [EC:4.2.3.1]
D Smar_0094 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Smar_0586 Vitamin B6 biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Smar_0585 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:smr00760]
D Smar_0459 Quinolinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Smar_1488 cytidyltransferase-related domain K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D Smar_0936 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D Smar_1310 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Smar_0723 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:smr00770]
D Smar_1381 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Smar_1382 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Smar_1380 pantothenate kinase K06982 pok; pantoate kinase [EC:2.7.1.169]
D Smar_1379 pantothenate synthetase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D Smar_1378 Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Smar_0835 conserved hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237]
D Smar_0238 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Smar_1292 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00780 Biotin metabolism [PATH:smr00780]
D Smar_0561 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Smar_0677 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Smar_1490 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:smr00785]
D Smar_0189 Radical SAM domain protein K09711 lipS1; lipoyl synthase
D Smar_0190 Radical SAM domain protein K24689 lipS2; lipoyl synthase
D Smar_0191 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_1113 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Smar_1114 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Smar_1112 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Smar_1109 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:smr00790]
D Smar_1168 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Smar_1140 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Smar_1586 Radical SAM domain protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Smar_1587 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Smar_0303 molybdenum cofactor synthesis domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Smar_1572 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Smar_0210 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Smar_1594 MoeA domain protein, domain I and II K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Smar_0170 Nucleotidyl transferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:smr00670]
D Smar_1110 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Smar_1112 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Smar_1078 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Smar_0493 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:smr00860]
D Smar_0824 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Smar_0766 Ferritin, Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:smr00130]
D Smar_1127 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Smar_0800 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:smr00900]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Smar_1335 putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D Smar_1337 hypothetical protein K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D Smar_0178 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D Smar_0218 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D Smar_0511 isopentenyl phosphate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26]
D Smar_0622 predicted aconitase subunit 1 K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182]
D Smar_0623 protein of unknown function DUF126 K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182]
D Smar_0621 UbiD family decarboxylase K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126]
D Smar_1127 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Smar_0822 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Smar_0494 Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Smar_1245 Undecaprenyl pyrophosphate synthetase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D Smar_0783 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Smar_0849 Nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:smr00946]
D Smar_1391 glycoside hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
D Smar_0337 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:smr00521]
D Smar_1514 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Smar_1286 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Smar_0298 L-myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Smar_0548 D-fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Smar_0783 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Smar_0849 Nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Smar_1514 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D Smar_0783 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Smar_0849 Nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 00401 Novobiocin biosynthesis
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D Smar_0561 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Smar_0677 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:smr00999]
D Smar_1298 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Smar_1391 glycoside hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:smr00362]
D Smar_1504 oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Smar_1503 oxaloacetate decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D Smar_1127 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:smr00625]
D Smar_1072 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Smar_0696 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Smar_0045 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D Smar_1449 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_0998 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Smar_1450 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_0997 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Smar_1447 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1000 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Smar_1448 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Smar_0999 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:smr00626]
D Smar_1072 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Smar_0696 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Smar_0045 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:smr03020]
D Smar_0802 DNA-directed RNA polymerase, subunit B' / DNA-directed RNA polymerase, subunit B' K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D Smar_0803 DNA-directed RNA polymerase, subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D Smar_0804 DNA-directed RNA polymerase, subunit A' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D Smar_0815 DNA-directed RNA polymerase, subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D Smar_0636 RNA polymerase, dimerisation K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D Smar_0833 DNA-directed RNA polymerase, subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D Smar_0776 DNA-directed RNA polymerase, subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D Smar_0909 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
D Smar_0801 DNA-directed RNA polymerase, subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D Smar_0819 DNA-directed RNA polymerase, subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D Smar_1004 conserved hypothetical protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
C 03022 Basal transcription factors [PATH:smr03022]
D Smar_1137 Transcription initiation factor IIB (TFIIB) K03124 TFIIB; transcription initiation factor TFIIB
D Smar_1250 Zinc finger, TFIIB-type domain protein K03124 TFIIB; transcription initiation factor TFIIB
D Smar_1322 TATA binding protein of transcription factor TFIID K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D Smar_0918 Transcription factor IIE (TFIIE), alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:smr03010]
D Smar_0820 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Smar_1025 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Smar_0813 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Smar_1039 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Smar_0809 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Smar_1034 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Smar_0818 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Smar_0811 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Smar_0814 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Smar_0807 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Smar_0812 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Smar_1033 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Smar_0841 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Smar_1028 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Smar_1023 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Smar_0844 SSU ribosomal protein S3AE K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D Smar_1031 SSU ribosomal protein S4E K02987 RP-S4e; small subunit ribosomal protein S4e
D Smar_0830 SSU ribosomal protein S6E K02991 RP-S6e; small subunit ribosomal protein S6e
D Smar_1247 SSU ribosomal protein S8E K02995 RP-S8e; small subunit ribosomal protein S8e
D Smar_0906 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e
D Smar_1084 SSU ribosomal protein S19E K02966 RP-S19e; small subunit ribosomal protein S19e
D Smar_0836 SSU ribosomal protein S24E K02974 RP-S24e; small subunit ribosomal protein S24e
D Smar_1216 30S ribosomal protein S25e K02975 RP-S25e; small subunit ribosomal protein S25e
D Smar_0873 SSU ribosomal protein S26E K02976 RP-S26e; small subunit ribosomal protein S26e
D Smar_0615 SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e
D Smar_0837 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D Smar_0826 SSU ribosomal protein S28E K02979 RP-S28e; small subunit ribosomal protein S28e
D Smar_1257 SSU ribosomal protein S30E K02983 RP-S30e; small subunit ribosomal protein S30e
D Smar_1094 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Smar_1019 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Smar_1016 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Smar_1032 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Smar_1035 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Smar_1095 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Smar_1093 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Smar_0817 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Smar_1029 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Smar_1041 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Smar_1038 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Smar_1024 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Smar_1018 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Smar_1030 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Smar_1026 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Smar_1040 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Smar_1017 LSU ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e
D Smar_0825 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D Smar_0629 LSU ribosomal protein L10AE K02866 RP-L10e; large subunit ribosomal protein L10e
D Smar_0162 50S ribosomal protein L13e K02873 RP-L13e; large subunit ribosomal protein L13e
D Smar_1046 LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e
D Smar_0852 LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e
D Smar_0816 LSU ribosomal protein L18AE K02883 RP-L18e; large subunit ribosomal protein L18e
D Smar_1037 LSU ribosomal protein L19E K02885 RP-L19e; large subunit ribosomal protein L19e
D Smar_0775 LSU ribosomal protein L21E K02889 RP-L21e; large subunit ribosomal protein L21e
D Smar_0827 LSU ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e
D Smar_0805 LSU ribosomal protein L30E K02908 RP-L30e; large subunit ribosomal protein L30e
D Smar_1087 LSU ribosomal protein L31E K02910 RP-L31e; large subunit ribosomal protein L31e
D Smar_1036 LSU ribosomal protein L32E K02912 RP-L32e; large subunit ribosomal protein L32e
D Smar_1044 LSU ribosomal protein L34E K02915 RP-L34e; large subunit ribosomal protein L34e
D Smar_0295 LSU ribosomal protein L35AE K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D Smar_0944 LSU ribosomal protein L37E K02922 RP-L37e; large subunit ribosomal protein L37e
D Smar_0861 LSU ribosomal protein L37AE K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D Smar_0869 LSU ribosomal protein L38E K02923 RP-L38e; large subunit ribosomal protein L38e
D Smar_1086 LSU ribosomal protein L39E K02924 RP-L39e; large subunit ribosomal protein L39e
D Smar_0686 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D Smar_0616 LSU ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e
D Smar_1089 LSU ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX
D Smar_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Smar_R0041 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Smar_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:smr00970]
D Smar_R0016 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Smar_R0045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Smar_R0026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Smar_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0032 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0019 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Smar_R0010 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Smar_R0038 pseudogene K14222 tRNA-Cys; tRNA Cys
D Smar_R0014 pseudogene K14223 tRNA-Gln; tRNA Gln
D Smar_R0034 pseudogene K14223 tRNA-Gln; tRNA Gln
D Smar_R0031 pseudogene K14224 tRNA-Glu; tRNA Glu
D Smar_R0005 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Smar_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Smar_R0043 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Smar_R0030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Smar_R0011 tRNA-His K14226 tRNA-His; tRNA His
D Smar_R0042 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Smar_R0018 pseudogene K14228 tRNA-Leu; tRNA Leu
D Smar_R0013 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Smar_R0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Smar_R0003 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Smar_R0009 pseudogene K14228 tRNA-Leu; tRNA Leu
D Smar_R0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Smar_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met
D Smar_R0024 tRNA-Met K14230 tRNA-Met; tRNA Met
D Smar_R0029 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Smar_R0044 pseudogene K14232 tRNA-Pro; tRNA Pro
D Smar_R0037 pseudogene K14232 tRNA-Pro; tRNA Pro
D Smar_R0017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Smar_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Smar_R0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Smar_R0039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Smar_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Smar_R0002 pseudogene K14234 tRNA-Thr; tRNA Thr
D Smar_R0007 tRNA-Val K14237 tRNA-Val; tRNA Val
D Smar_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val
D Smar_R0012 tRNA-Val K14237 tRNA-Val; tRNA Val
D Smar_0824 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Smar_1258 glutamyl-tRNA(Gln) amidotransferase subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7]
D Smar_1259 glutamyl-tRNA(Gln) amidotransferase subunit E K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7]
D Smar_1097 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Smar_0296 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Smar_1370 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Smar_0333 aspartate-ammonia ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Smar_1134 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Smar_0978 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Smar_1354 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Smar_0517 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Smar_1511 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Smar_0738 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Smar_0118 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Smar_0066 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Smar_0107 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Smar_1588 DALR anticodon binding domain protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Smar_1165 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Smar_0986 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Smar_0257 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Smar_0250 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Smar_0890 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Smar_0491 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:smr03060]
D Smar_1042 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Smar_0772 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Smar_R0021 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Smar_1091 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Smar_1248 signal recognition particle, subunit SRP19 (srp19) K03105 SRP19; signal recognition particle subunit SRP19
D Smar_0147 Anion-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Smar_1272 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:smr04122]
D Smar_1586 Radical SAM domain protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Smar_0418 thiamineS protein K03636 moaD; sulfur-carrier protein
D Smar_0666 MoaD family protein K03636 moaD; sulfur-carrier protein
D Smar_0788 thiamineS protein K03636 moaD; sulfur-carrier protein
D Smar_0789 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Smar_1587 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Smar_0303 molybdenum cofactor synthesis domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Smar_0447 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Smar_1601 thiamineS protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome [PATH:smr03050]
D Smar_0914 Proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit
D Smar_0856 20S proteasome, A and B subunits K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D Smar_0932 20S proteasome, A and B subunits K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Smar_0938 20S proteasome, A and B subunits K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:smr03018]
D Smar_0634 RNA binding S1 domain protein K07573 CSL4; exosome complex component CSL4
D Smar_0858 ribosomal RNA-processing protein RRP4 K03679 RRP4; exosome complex component RRP4
D Smar_0860 ribosomal RNA-processing protein RRP42 K12589 RRP42; exosome complex component RRP42
D Smar_0859 ribosomal RNA-processing protein RRP41/SKI6 K11600 RRP41; exosome complex component RRP41
D Smar_1274 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:smr03030]
D Smar_0889 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Smar_1282 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Smar_0888 replicative DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Smar_0872 replicative DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Smar_0267 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Smar_1227 replicative DNA helicase Mcm K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D Smar_0639 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D Smar_0427 DNA primase, large subunit K18882 priL; DNA primase large subunit
D Smar_0638 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen
D Smar_1365 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen
D Smar_1002 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen
D Smar_1225 replication factor C small subunit K04801 rfcS; replication factor C small subunit
D Smar_1224 replication factor C large subunit K04800 rfcL; replication factor C large subunit
D Smar_0719 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Smar_1318 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03410 Base excision repair [PATH:smr03410]
D Smar_1371 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Smar_0638 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen
D Smar_1365 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen
D Smar_1002 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen
D Smar_0719 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Smar_1318 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Smar_1316 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Smar_1185 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Smar_0842 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Smar_1161 phosphoesterase, DHHA1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C 03420 Nucleotide excision repair [PATH:smr03420]
D Smar_0182 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D Smar_0638 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen
D Smar_1365 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen
D Smar_1002 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen
D Smar_1318 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03430 Mismatch repair [PATH:smr03430]
D Smar_0842 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Smar_1161 phosphoesterase, DHHA1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Smar_0638 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen
D Smar_1365 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen
D Smar_1002 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen
D Smar_1318 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03440 Homologous recombination
D Smar_0842 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Smar_1161 phosphoesterase, DHHA1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C 03450 Non-homologous end-joining
D Smar_0719 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:smr03250]
D Smar_0834 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D Smar_1092 LSU ribosomal protein L24A K15172 SUPT5H; transcription elongation factor SPT5
D Smar_1278 AAA ATPase, central domain protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:smr02010]
D Smar_0280 tungstate/molybdate binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Smar_0281 tungstate/molybdate transport system permease protein K15496 wtpB; molybdate/tungstate transport system permease protein
D Smar_0282 ABC transporter related K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D Smar_0071 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Smar_0072 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Smar_0152 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Smar_0153 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Smar_0154 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Smar_0302 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Smar_1146 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Smar_0692 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Smar_0131 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Smar_0694 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Smar_0133 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Smar_0134 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Smar_0695 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Smar_0693 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Smar_0132 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Smar_1149 extracellular solute-binding protein, family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Smar_1148 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D Smar_1147 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D Smar_0108 extracellular solute-binding protein, family 1 K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Smar_0109 binding-protein-dependent transport systems inner membrane component K17238 inoF; inositol-phosphate transport system permease protein
D Smar_0110 binding-protein-dependent transport systems inner membrane component K17239 inoG; inositol-phosphate transport system permease protein
D Smar_0111 ABC transporter related K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Smar_0923 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Smar_0924 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Smar_0925 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Smar_0926 ABC transporter related K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Smar_0003 cobalamin biosynthesis protein K02009 cbiN; cobalt/nickel transport protein
D Smar_0002 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Smar_0004 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D Smar_0005 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Smar_0051 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Smar_0390 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:smr03070]
D Smar_1042 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Smar_1091 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Smar_0772 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:smr02020]
D Smar_0923 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Smar_1100 hypothetical protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D Smar_0395 triphosphoribosyl-dephospho-CoA protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Smar_0183 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:smr02024]
D Smar_0346 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Smar_1332 putative oligopeptide transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Smar_0274 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Smar_0345 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Smar_1333 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Smar_0273 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Smar_0344 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Smar_1334 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Smar_0272 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Smar_0343 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Smar_1329 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Smar_0271 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Smar_0342 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Smar_1330 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Smar_1042 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Smar_1091 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Smar_0772 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Smar_1100 hypothetical protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Smar_1274 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:smr01000]
C 01001 Protein kinases [BR:smr01001]
D Smar_0839 Mn2+-dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D Smar_1106 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Smar_1296 protein of unknown function RIO1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D Smar_0544 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Smar_1100 hypothetical protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:smr01009]
D Smar_1102 translation initiation factor 2 subunit beta (aeIF-2b) K03238 EIF2S2; translation initiation factor 2 subunit 2
D Smar_0929 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
C 01002 Peptidases and inhibitors [BR:smr01002]
D Smar_0975 peptidase A24A, prepilin type IV K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D Smar_1452 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D Smar_0684 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase)-like protein K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D Smar_0782 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Smar_1520 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Smar_0591 peptidase U34, dipeptidase K14358 SCRN; secernin
D Smar_0166 peptidase M17, leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Smar_0138 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Smar_0892 methionine aminopeptidase, type II K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Smar_0549 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Smar_0393 peptidase M29, aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Smar_1598 peptidase M32, carboxypeptidase Taq metallopeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D Smar_1324 HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Smar_1053 peptidase, zinc-dependent K06974 amzA; archaemetzincin [EC:3.4.-.-]
D Smar_1505 peptidase M55, D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D Smar_1272 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D Smar_0743 Rhomboid family protein K07059 K07059; rhomboid family protein
D Smar_0856 20S proteasome, A and B subunits K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D Smar_0932 20S proteasome, A and B subunits K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Smar_0938 20S proteasome, A and B subunits K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Smar_1517 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Smar_1215 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Smar_1349 peptidase U62, modulator of DNA gyrase K03592 pmbA; PmbA protein
D Smar_1491 peptidase U62, modulator of DNA gyrase K03592 pmbA; PmbA protein
D Smar_1348 peptidase U62, modulator of DNA gyrase K03568 tldD; TldD protein
D Smar_1492 peptidase U62, modulator of DNA gyrase K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:smr01003]
D Smar_0181 glycosyl transferase, family 4 K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]
D Smar_0949 glycosyl transferase, group 1 K03844 ALG11; alpha-1,2-mannosyltransferase [EC:2.4.1.131]
D Smar_0223 Oligosaccharyl transferase, STT3 subunit K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18]
D Smar_0112 glycosyl transferase, family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Smar_1315 GtrA family protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Smar_1393 glycosyl transferase, group 1 K00703 glgA; starch synthase [EC:2.4.1.21]
D Smar_0498 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:smr01011]
C 01004 Lipid biosynthesis proteins [BR:smr01004]
D Smar_0561 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Smar_0677 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Smar_0449 acetyl-CoA synthetase (ADP-forming) alpha subunit / branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Smar_1241 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Smar_1242 branched-chain acyl-CoA synthetase (ADP-forming) beta subunit / acetyl-CoA synthetase (ADP-forming) beta subunit K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:smr01006]
D Smar_0494 Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
C 01007 Amino acid related enzymes [BR:smr01007]
D Smar_0107 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Smar_0824 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Smar_0890 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Smar_0491 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Smar_0517 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Smar_1588 DALR anticodon binding domain protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Smar_1511 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Smar_0066 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Smar_0738 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Smar_0118 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Smar_1370 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Smar_0333 aspartate-ammonia ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Smar_0296 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Smar_0986 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Smar_1134 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Smar_1354 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Smar_1165 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Smar_0978 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Smar_1097 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Smar_0257 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Smar_0250 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Smar_0276 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Smar_0100 aromatic amino acid aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D Smar_1591 aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:smr03000]
D Smar_0919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Smar_1322 TATA binding protein of transcription factor TFIID K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D Smar_0048 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D Smar_1508 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Smar_1383 transcriptional regulator, Fis family K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator
D Smar_0297 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D Smar_0758 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D Smar_0194 iron dependent repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D Smar_1490 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Smar_0087 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D Smar_0086 transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D Smar_1500 hypothetical protein K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator
D Smar_0319 CRISPR-associated HTH regulatory protein, Csa3 family K07725 csa3; CRISPR-associated protein Csa3
D Smar_1254 helix-turn-helix domain protein K07728 K07728; putative transcriptional regulator
D Smar_0612 helix-turn-helix domain protein K07731 K07731; putative transcriptional regulator
D Smar_0366 transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Smar_0006 putative transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Smar_0054 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 03021 Transcription machinery [BR:smr03021]
D Smar_1137 Transcription initiation factor IIB (TFIIB) K03124 TFIIB; transcription initiation factor TFIIB
D Smar_1250 Zinc finger, TFIIB-type domain protein K03124 TFIIB; transcription initiation factor TFIIB
D Smar_1322 TATA binding protein of transcription factor TFIID K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D Smar_0918 Transcription factor IIE (TFIIE), alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D Smar_0834 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D Smar_1092 LSU ribosomal protein L24A K15172 SUPT5H; transcription elongation factor SPT5
D Smar_1319 protein of unknown function, ATP binding K24104 GPN; GPN-loop GTPase
D Smar_1240 protein of unknown function, ATP binding K24104 GPN; GPN-loop GTPase
D Smar_0806 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA
D Smar_0803 DNA-directed RNA polymerase, subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D Smar_0804 DNA-directed RNA polymerase, subunit A' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D Smar_0802 DNA-directed RNA polymerase, subunit B' / DNA-directed RNA polymerase, subunit B' K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D Smar_0815 DNA-directed RNA polymerase, subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D Smar_0833 DNA-directed RNA polymerase, subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D Smar_0776 DNA-directed RNA polymerase, subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D Smar_0909 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
D Smar_0801 DNA-directed RNA polymerase, subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D Smar_0636 RNA polymerase, dimerisation K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D Smar_0819 DNA-directed RNA polymerase, subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D Smar_1004 conserved hypothetical protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
D Smar_0904 DNA-directed RNA polymerase, subunit M K03057 tfs; transcription factor S
D Smar_0637 DNA-directed RNA polymerase, subunit M K03057 tfs; transcription factor S
C 03019 Messenger RNA biogenesis [BR:smr03019]
D Smar_0834 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D Smar_1092 LSU ribosomal protein L24A K15172 SUPT5H; transcription elongation factor SPT5
D Smar_1123 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Smar_0717 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Smar_0887 cell division protein pelota K06965 PELO; protein pelota
D Smar_0540 peptide chain release factor subunit 1 (aeRF-1) K03265 ETF1; peptide chain release factor subunit 1
D Smar_0810 translation elongation factor 1A (EF-1A/EF-Tu) K03231 EEF1A; elongation factor 1-alpha
D Smar_0634 RNA binding S1 domain protein K07573 CSL4; exosome complex component CSL4
D Smar_0858 ribosomal RNA-processing protein RRP4 K03679 RRP4; exosome complex component RRP4
D Smar_0859 ribosomal RNA-processing protein RRP41/SKI6 K11600 RRP41; exosome complex component RRP41
D Smar_0860 ribosomal RNA-processing protein RRP42 K12589 RRP42; exosome complex component RRP42
D Smar_1274 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 03041 Spliceosome
C 03011 Ribosome [BR:smr03011]
D Smar_0844 SSU ribosomal protein S3AE K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D Smar_1031 SSU ribosomal protein S4E K02987 RP-S4e; small subunit ribosomal protein S4e
D Smar_0830 SSU ribosomal protein S6E K02991 RP-S6e; small subunit ribosomal protein S6e
D Smar_1247 SSU ribosomal protein S8E K02995 RP-S8e; small subunit ribosomal protein S8e
D Smar_0906 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e
D Smar_1084 SSU ribosomal protein S19E K02966 RP-S19e; small subunit ribosomal protein S19e
D Smar_0836 SSU ribosomal protein S24E K02974 RP-S24e; small subunit ribosomal protein S24e
D Smar_1216 30S ribosomal protein S25e K02975 RP-S25e; small subunit ribosomal protein S25e
D Smar_0873 SSU ribosomal protein S26E K02976 RP-S26e; small subunit ribosomal protein S26e
D Smar_0615 SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e
D Smar_0837 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D Smar_0826 SSU ribosomal protein S28E K02979 RP-S28e; small subunit ribosomal protein S28e
D Smar_1257 SSU ribosomal protein S30E K02983 RP-S30e; small subunit ribosomal protein S30e
D Smar_1017 LSU ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e
D Smar_0825 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D Smar_0629 LSU ribosomal protein L10AE K02866 RP-L10e; large subunit ribosomal protein L10e
D Smar_0162 50S ribosomal protein L13e K02873 RP-L13e; large subunit ribosomal protein L13e
D Smar_1046 LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e
D Smar_0852 LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e
D Smar_0816 LSU ribosomal protein L18AE K02883 RP-L18e; large subunit ribosomal protein L18e
D Smar_1037 LSU ribosomal protein L19E K02885 RP-L19e; large subunit ribosomal protein L19e
D Smar_0775 LSU ribosomal protein L21E K02889 RP-L21e; large subunit ribosomal protein L21e
D Smar_0827 LSU ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e
D Smar_0805 LSU ribosomal protein L30E K02908 RP-L30e; large subunit ribosomal protein L30e
D Smar_1087 LSU ribosomal protein L31E K02910 RP-L31e; large subunit ribosomal protein L31e
D Smar_1036 LSU ribosomal protein L32E K02912 RP-L32e; large subunit ribosomal protein L32e
D Smar_1044 LSU ribosomal protein L34E K02915 RP-L34e; large subunit ribosomal protein L34e
D Smar_0295 LSU ribosomal protein L35AE K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D Smar_0944 LSU ribosomal protein L37E K02922 RP-L37e; large subunit ribosomal protein L37e
D Smar_0861 LSU ribosomal protein L37AE K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D Smar_0869 LSU ribosomal protein L38E K02923 RP-L38e; large subunit ribosomal protein L38e
D Smar_1086 LSU ribosomal protein L39E K02924 RP-L39e; large subunit ribosomal protein L39e
D Smar_0686 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D Smar_0616 LSU ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e
D Smar_0820 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Smar_1025 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Smar_0813 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Smar_1039 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Smar_0809 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Smar_1034 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Smar_0818 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Smar_0811 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Smar_0814 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Smar_0807 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Smar_0812 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Smar_1033 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Smar_0841 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Smar_1028 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Smar_1023 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Smar_1094 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Smar_1019 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Smar_1016 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Smar_1032 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Smar_1035 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Smar_1095 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Smar_1093 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Smar_0817 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Smar_1029 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Smar_1041 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Smar_1038 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Smar_1024 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Smar_1018 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Smar_1030 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Smar_1026 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Smar_1040 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Smar_1089 LSU ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX
D Smar_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Smar_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Smar_R0041 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:smr03009]
D Smar_1256 rRNA biogenesis protein Nop56/Nop58 K14564 NOP56; nucleolar protein 56
D Smar_1048 tRNA pseudouridine synthase B K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D Smar_0644 Nucleolar RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D Smar_0862 Brix K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D Smar_1081 Suppressor Mra1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D Smar_1107 KH, type 1, domain protein K06961 KRR1; ribosomal RNA assembly protein
D Smar_1106 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Smar_1296 protein of unknown function RIO1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D Smar_0791 conserved hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D Smar_0955 Protein of unknown function DUF367 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D Smar_0903 ABC transporter related K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
D Smar_0934 small GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein
D Smar_1027 ribonuclease P protein subunit Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D Smar_0855 ribonuclease P protein subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D Smar_0854 RNase P subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D Smar_0620 conserved hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
D Smar_1088 translation initiation factor 6 (aeIF-6) K03264 EIF6; translation initiation factor 6
D Smar_1104 NMD protein affecting ribosome stability and mRNA decay-like protein K07562 NMD3; 60S ribosomal export protein NMD3
D Smar_0401 NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D Smar_0857 Shwachman-Bodian-Diamond syndrome proteins K14574 SDO1; ribosome maturation protein SDO1
D Smar_1123 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Smar_0717 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Smar_1431 hypothetical protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D Smar_1255 rRNA 2'-O-methyltransferase fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein
D Smar_0825 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D Smar_1249 snoRNP protein GAR1 K07569 gar1; RNA-binding protein
D Smar_0806 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA
D Smar_0778 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Smar_0255 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Smar_0376 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Smar_0421 tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Smar_1049 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Smar_1377 SSU ribosomal protein S18P alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Smar_0746 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D Smar_0916 small GTP-binding protein K03665 hflX; GTPase
D Smar_0539 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Smar_1083 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein
D Smar_0851 GTPase of unknown function-like protein K06942 ychF; ribosome-binding ATPase
D Smar_0627 protein of unknown function DUF402 K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-]
C 03016 Transfer RNA biogenesis [BR:smr03016]
D Smar_1027 ribonuclease P protein subunit Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D Smar_0855 ribonuclease P protein subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D Smar_0854 RNase P subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D Smar_1236 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Smar_0985 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Smar_1052 archease family protein K24956 ZBTB8OS; protein archease
D Smar_0810 translation elongation factor 1A (EF-1A/EF-Tu) K03231 EEF1A; elongation factor 1-alpha
D Smar_0824 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Smar_1165 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Smar_0066 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Smar_0118 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Smar_1511 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Smar_1588 DALR anticodon binding domain protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Smar_1097 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Smar_1370 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Smar_0333 aspartate-ammonia ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Smar_1134 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Smar_0978 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Smar_1354 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Smar_0517 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Smar_0738 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Smar_0986 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Smar_0257 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Smar_0250 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Smar_0890 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Smar_0491 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Smar_0445 Protein of unknown function DUF516 K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Smar_1138 Ala-tRNA(Pro) hydrolase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D Smar_1101 RNA modification enzyme, MiaB family K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
D Smar_1252 N(2),N(2)-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D Smar_1376 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Smar_0722 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Smar_0877 tRNA (adenine-57, 58-N(1)-) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D Smar_0198 Wyosine base formation K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D Smar_0446 Protein of unknown function DUF207 K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D Smar_0713 conserved hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D Smar_0774 conserved hypothetical protein K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D Smar_0839 Mn2+-dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D Smar_0838 putative metalloendopeptidase, glycoprotease family K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D Smar_1570 histone acetyltransferase, ELP3 family K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D Smar_0539 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Smar_0035 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1
D Smar_R0027 RNA component of RNase P K01978 rnpB; M1 RNA
D Smar_0256 conserved hypothetical protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D Smar_1232 tRNA adenylyltransferase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72]
D Smar_0987 tRNA intron endonuclease, catalytic-like protein K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D Smar_1233 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Smar_0558 phosphotransferase KptA/Tpt1 K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D Smar_0107 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Smar_0296 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Smar_1131 Radical SAM domain protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Smar_1432 ribosomal RNA methyltransferase NOP2 K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]
D Smar_0628 putative RNA methylase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D Smar_1237 putative RNA methylase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D Smar_0917 protein of unknown function DUF127 K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
D Smar_0396 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Smar_0001 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Smar_0911 archaeosine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D Smar_0447 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Smar_1362 domain of unknown function DUF1743 K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22]
D Smar_1124 protein of unknown function DUF699, ATPase putative K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
C 03012 Translation factors [BR:smr03012]
D Smar_1105 translation initiation factor 1A (aeIF-1A) K03236 EIF1A; translation initiation factor 1A
D Smar_1136 translation initiation factor 1 (eIF-1/SUI1) K03113 EIF1; translation initiation factor 1
D Smar_0643 translation initiation factor 2 subunit alpha (aeIF-2a) K03237 EIF2S1; translation initiation factor 2 subunit 1
D Smar_1102 translation initiation factor 2 subunit beta (aeIF-2b) K03238 EIF2S2; translation initiation factor 2 subunit 2
D Smar_0831 translation initiation factor 2 subunit gamma (aeIF-2g) K03242 EIF2S3; translation initiation factor 2 subunit 3
D Smar_1358 initiation factor 2B related K03680 EIF2B4; translation initiation factor eIF-2B subunit delta
D Smar_1117 translation initiation factor 5A (eIF-5A) K03263 EIF5A; translation initiation factor 5A
D Smar_0829 translation initiation factor eaIF-5B K03243 EIF5B; translation initiation factor 5B
D Smar_1088 translation initiation factor 6 (aeIF-6) K03264 EIF6; translation initiation factor 6
D Smar_0810 translation elongation factor 1A (EF-1A/EF-Tu) K03231 EEF1A; elongation factor 1-alpha
D Smar_0716 translation elongation factor 1B (aEF-1B) K03232 EEF1B; elongation factor 1-beta
D Smar_0866 translation elongation factor 2 (EF-2/EF-G) K03234 EEF2; elongation factor 2
D Smar_0630 diphthamide biosynthesis protein K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]
D Smar_1167 putative ATP binding protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D Smar_0540 peptide chain release factor subunit 1 (aeRF-1) K03265 ETF1; peptide chain release factor subunit 1
D Smar_0779 methyltransferase small K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Smar_0714 protein of unknown function UPF0099 K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
C 03110 Chaperones and folding catalysts [BR:smr03110]
D Smar_1268 thermosome subunit K22447 cct; archaeal chaperonin
D Smar_0907 thermosome subunit K22447 cct; archaeal chaperonin
D Smar_0462 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Smar_1280 hypothetical protein K13993 HSP20; HSP20 family protein
D Smar_0864 prefoldin, beta subunit K04798 pfdB; prefoldin beta subunit
D Smar_0177 hydrogenase expression/synthesis, HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Smar_0940 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Smar_0093 Thioredoxin domain K03671 TXN; thioredoxin
D Smar_1266 hypothetical protein K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:smr04131]
D Smar_0828 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Smar_1123 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Smar_0717 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Smar_1278 AAA ATPase, central domain protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D Smar_0147 Anion-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Smar_0014 glycosyl hydrolases 38 domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Smar_1142 glycoside hydrolase, family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Smar_0899 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Smar_0810 translation elongation factor 1A (EF-1A/EF-Tu) K03231 EEF1A; elongation factor 1-alpha
C 04121 Ubiquitin system [BR:smr04121]
D Smar_0686 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D Smar_0837 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D Smar_1257 SSU ribosomal protein S30E K02983 RP-S30e; small subunit ribosomal protein S30e
C 03051 Proteasome [BR:smr03051]
D Smar_0856 20S proteasome, A and B subunits K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D Smar_0932 20S proteasome, A and B subunits K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Smar_0938 20S proteasome, A and B subunits K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Smar_0914 Proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit
C 03032 DNA replication proteins [BR:smr03032]
D Smar_0638 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen
D Smar_1365 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen
D Smar_1002 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen
D Smar_0719 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Smar_1318 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Smar_0919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Smar_0644 Nucleolar RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D Smar_1048 tRNA pseudouridine synthase B K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D Smar_0182 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D Smar_0889 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Smar_0797 ORC complex protein Cdc6/Orc1 K10725 cdc6A; archaeal cell division control protein 6
D Smar_1222 ORC complex protein Cdc6/Orc1 K10725 cdc6A; archaeal cell division control protein 6
D Smar_1227 replicative DNA helicase Mcm K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D Smar_0639 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D Smar_0427 DNA primase, large subunit K18882 priL; DNA primase large subunit
D Smar_1226 Protein of unknown function DUF1288 K09723 ginS; DNA replication factor GINS
D Smar_1282 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Smar_0888 replicative DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Smar_0872 replicative DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Smar_0267 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Smar_1224 replication factor C large subunit K04800 rfcL; replication factor C large subunit
D Smar_1225 replication factor C small subunit K04801 rfcS; replication factor C small subunit
D Smar_0980 Spo11/DNA topoisomerase VI, subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D Smar_0981 DNA topoisomerase VI, B subunit K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
D Smar_1271 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Smar_1121 Reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
D Smar_0967 DNA topoisomerase, type IA, central domain protein K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:smr03036]
D Smar_0919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Smar_1015 Protein of unknown function DUF171 K09142 SPOUT1; methyltransferase [EC:2.1.1.-]
D Smar_1162 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D Smar_0220 MRP protein-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Smar_0176 nucleotide-binding protein, mrp/nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:smr03400]
D Smar_0042 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Smar_1371 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Smar_0638 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen
D Smar_1365 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen
D Smar_1002 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen
D Smar_0719 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Smar_1318 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Smar_0182 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D Smar_1278 AAA ATPase, central domain protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D Smar_1194 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Smar_1203 deoxyUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Smar_1316 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Smar_1185 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Smar_0931 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Smar_0842 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Smar_1161 phosphoesterase, DHHA1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Smar_0077 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Smar_0074 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11
D Smar_0314 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Smar_0976 DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA
D Smar_0149 holliday junction resolvase K03552 hjr; holliday junction resolvase [EC:3.1.21.10]
D Smar_0209 DEAD/DEAH box helicase domain protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D Smar_1271 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Smar_1346 ATP dependent helicase, Lhr family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Smar_1006 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Smar_0350 Protein of unknown function DUF650, N-terminal domain K22585 nreA; DNA repair protein NreA
C 03029 Mitochondrial biogenesis [BR:smr03029]
D Smar_1027 ribonuclease P protein subunit Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D Smar_0855 ribonuclease P protein subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D Smar_0854 RNase P subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D Smar_0890 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Smar_0118 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Smar_1134 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Smar_1588 DALR anticodon binding domain protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Smar_0220 MRP protein-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Smar_0176 nucleotide-binding protein, mrp/nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:smr02000]
D Smar_0280 tungstate/molybdate binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Smar_0281 tungstate/molybdate transport system permease protein K15496 wtpB; molybdate/tungstate transport system permease protein
D Smar_0282 ABC transporter related K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D Smar_0071 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Smar_0072 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Smar_0152 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Smar_0153 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Smar_0154 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Smar_0302 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Smar_1146 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Smar_1149 extracellular solute-binding protein, family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Smar_1148 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D Smar_1147 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D Smar_0108 extracellular solute-binding protein, family 1 K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Smar_0109 binding-protein-dependent transport systems inner membrane component K17238 inoF; inositol-phosphate transport system permease protein
D Smar_0110 binding-protein-dependent transport systems inner membrane component K17239 inoG; inositol-phosphate transport system permease protein
D Smar_0111 ABC transporter related K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Smar_0692 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Smar_0131 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Smar_0694 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Smar_0133 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Smar_0134 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Smar_0695 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Smar_0693 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Smar_0132 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Smar_0091 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Smar_0299 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Smar_0090 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Smar_0300 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Smar_0089 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Smar_0301 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Smar_0923 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Smar_0924 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Smar_0925 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Smar_0926 ABC transporter related K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Smar_1543 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Smar_0346 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Smar_1332 putative oligopeptide transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Smar_0274 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Smar_0345 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Smar_1333 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Smar_0273 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Smar_0344 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Smar_1334 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Smar_0272 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Smar_0343 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Smar_1329 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Smar_0271 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Smar_0342 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Smar_1330 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Smar_0508 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Smar_0507 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Smar_0506 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Smar_0003 cobalamin biosynthesis protein K02009 cbiN; cobalt/nickel transport protein
D Smar_0004 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D Smar_0002 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Smar_0005 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Smar_0051 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Smar_0390 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Smar_0187 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Smar_0050 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Smar_0040 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Smar_0053 conserved hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D Smar_0364 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Smar_0365 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Smar_0363 ABC transporter related K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D Smar_0113 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Smar_1386 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Smar_0063 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Smar_0168 ABC-type Na+ efflux pump permease component-like protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Smar_0064 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Smar_0114 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Smar_0169 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Smar_0404 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Smar_1385 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Smar_0065 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Smar_1557 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Smar_1440 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Smar_1403 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Smar_1404 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Smar_1438 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Smar_0117 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Smar_0335 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D Smar_0412 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Smar_1441 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Smar_1375 major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D Smar_1076 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Smar_1478 TrkA-N domain protein K10716 kch; voltage-gated potassium channel
D Smar_1211 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D Smar_0546 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D Smar_0784 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Smar_0060 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Smar_0219 hypothetical protein K07244 K07244; mgtE-like transporter
D Smar_1597 Mg2+ transporter protein, CorA family protein K03284 corA; magnesium transporter
D Smar_0128 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Smar_1139 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Smar_0375 protein of unknown function DUF6, transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Smar_0700 protein of unknown function DUF6, transmembrane K03298 TC.DME; drug/metabolite transporter, DME family
D Smar_0081 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Smar_0659 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Smar_0251 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Smar_1430 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Smar_1219 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D Smar_1098 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D Smar_1099 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Smar_1220 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Smar_0614 Cl-channel, voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Smar_0147 Anion-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Smar_0661 arsenite transporter, ACR3 family K03325 ACR3; arsenite transporter
D Smar_1058 NADH/Ubiquinone/plastoquinone (complex I) K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D Smar_0653 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Smar_0025 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Smar_1069 NADH-ubiquinone oxidoreductase, chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Smar_0026 NADH-ubiquinone oxidoreductase, chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Smar_1071 Membrane bound hydrogenase subunit mbhH K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Smar_0028 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Smar_0645 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Smar_0655 Membrane bound hydrogenase subunit mbhA K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Smar_0027 Membrane bound protein complex subunit mbxA K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Smar_1070 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Smar_0022 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Smar_0650 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Smar_1065 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Smar_0651 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Smar_0023 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Smar_1066 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Smar_0374 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Smar_0055 protein of unknown function DUF125, transmembrane K22736 VIT; vacuolar iron transporter family protein
D Smar_0127 multiple antibiotic resistance (MarC)-related proteins K05595 marC; multiple antibiotic resistance protein
D Smar_0287 multiple antibiotic resistance (MarC)-related proteins K05595 marC; multiple antibiotic resistance protein
D Smar_1504 oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Smar_1503 oxaloacetate decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Smar_1579 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Smar_1580 small GTP-binding protein K04759 feoB; ferrous iron transport protein B
D Smar_1013 AAA ATPase K25503 cedB; DNA import protein CedB
D Smar_1012 hypothetical protein K25504 cedA; DNA import protein CedA
D Smar_1011 conserved hypothetical protein K25505 cedA1; DNA import protein CedA1
C 02044 Secretion system [BR:smr02044]
D Smar_1471 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI
D Smar_0983 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI
D Smar_1472 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ
D Smar_0984 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D Smar_0975 peptidase A24A, prepilin type IV K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D Smar_1042 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Smar_0772 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Smar_1091 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Smar_1248 signal recognition particle, subunit SRP19 (srp19) K03105 SRP19; signal recognition particle subunit SRP19
C 02042 Bacterial toxins [BR:smr02042]
D Smar_0708 Hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:smr02022]
D Smar_1100 hypothetical protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:smr02035]
D Smar_1471 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI
D Smar_0983 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI
D Smar_1472 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ
D Smar_0984 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D Smar_0975 peptidase A24A, prepilin type IV K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:smr04812]
D Smar_0821 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein
C 04147 Exosome [BR:smr04147]
D Smar_1274 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Smar_0240 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Smar_0899 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Smar_0058 1-Cys peroxiredoxin / 3-Cys thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Smar_0810 translation elongation factor 1A (EF-1A/EF-Tu) K03231 EEF1A; elongation factor 1-alpha
D Smar_0866 translation elongation factor 2 (EF-2/EF-G) K03234 EEF2; elongation factor 2
D Smar_0719 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Smar_0837 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D Smar_1123 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Smar_0717 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Smar_1425 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Smar_0929 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Smar_0398 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Smar_1153 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D Smar_0264 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Smar_0183 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Smar_0554 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Smar_1115 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Smar_0497 glutamate dehydrogenase (NADP) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Smar_0901 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:smr02048]
D Smar_0314 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Smar_0316 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Smar_0324 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Smar_0315 CRISPR-associated protein, Csa1 family K19085 csa1; CRISPR-associated protein Csa1
D Smar_0321 CRISPR-associated autoregulator, Csa2 family K19074 csa2; CRISPR-associated protein Csa2
D Smar_0319 CRISPR-associated HTH regulatory protein, Csa3 family K07725 csa3; CRISPR-associated protein Csa3
D Smar_0320 CRISPR-associated protein, Csa5 family K19087 csa5; CRISPR-associated protein Csa5
D Smar_0317 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Smar_1195 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Smar_0322 CRISPR-associated protein, Cas5a family K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c
D Smar_0311 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Smar_0308 CRISPR-associated protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Smar_0309 protein of unknown function DUF324 K19139 csm4; CRISPR-associated protein Csm4
D Smar_0310 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Smar_0900 CRISPR-associated protein DxTHG motif K19143 csx1; CRISPR-associated protein Csx1
D Smar_0763 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Smar_0762 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Smar_0761 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Smar_0919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Smar_0571 ATPase associated with various cellular activities, AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Smar_0573 ATPase associated with various cellular activities, AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Smar_0879 putative transcriptional regulators, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D Smar_0824 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Smar_0724 Nucleotide binding protein, PINc K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:smr04090]
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:smr00536]
D Smar_0708 Hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:smr00537]
D Smar_0708 Hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:smr03100]
D Smar_R0016 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Smar_R0045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Smar_R0026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Smar_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0032 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Smar_R0019 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Smar_R0010 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Smar_R0038 pseudogene K14222 tRNA-Cys; tRNA Cys
D Smar_R0014 pseudogene K14223 tRNA-Gln; tRNA Gln
D Smar_R0034 pseudogene K14223 tRNA-Gln; tRNA Gln
D Smar_R0031 pseudogene K14224 tRNA-Glu; tRNA Glu
D Smar_R0005 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Smar_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Smar_R0043 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Smar_R0030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Smar_R0011 tRNA-His K14226 tRNA-His; tRNA His
D Smar_R0042 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Smar_R0018 pseudogene K14228 tRNA-Leu; tRNA Leu
D Smar_R0013 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Smar_R0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Smar_R0003 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Smar_R0009 pseudogene K14228 tRNA-Leu; tRNA Leu
D Smar_R0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Smar_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met
D Smar_R0024 tRNA-Met K14230 tRNA-Met; tRNA Met
D Smar_R0029 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Smar_R0044 pseudogene K14232 tRNA-Pro; tRNA Pro
D Smar_R0037 pseudogene K14232 tRNA-Pro; tRNA Pro
D Smar_R0017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Smar_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Smar_R0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Smar_R0039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Smar_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Smar_R0002 pseudogene K14234 tRNA-Thr; tRNA Thr
D Smar_R0007 tRNA-Val K14237 tRNA-Val; tRNA Val
D Smar_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val
D Smar_R0012 tRNA-Val K14237 tRNA-Val; tRNA Val
D Smar_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Smar_R0041 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Smar_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Smar_R0021 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Smar_R0027 RNA component of RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Smar_0356 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Smar_0355 molybdopterin dehydrogenase, FAD-binding K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Smar_0292 indolepyruvate ferredoxin oxidoreductase, subunit iorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Smar_0291 pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Smar_0392 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Smar_1063 NADH ubiquinone oxidoreductase, 20 kDa subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D Smar_0046 Desulfoferrodoxin, ferrous iron-binding region K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Smar_0795 Radical SAM domain protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D Smar_0407 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Smar_0691 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Smar_1079 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Smar_1239 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Smar_0735 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Smar_1057 NADH/Ubiquinone/plastoquinone (complex I) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D Smar_1060 hydrogenase-4 component C K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D Smar_1061 NADH dehydrogenase (ubiquinone), 30 kDa subunit K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D Smar_0720 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Smar_0509 diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98]
D Smar_0501 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D Smar_1363 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D Smar_0557 conserved hypothetical protein K18678 VTE5; phytol kinase [EC:2.7.1.182]
D Smar_1186 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D Smar_0419 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Smar_1507 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Smar_0275 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Smar_0532 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Smar_1302 protein of unknown function DUF91 K07503 nucS; endonuclease [EC:3.1.-.-]
D Smar_0377 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Smar_0214 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Smar_0709 LmbE family protein K22408 dac; N,N'-diacetylchitobiose non-reducing end deacetylase [EC:3.5.1.136]
D Smar_1416 ATPase associated with various cellular activities, AAA_5 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Smar_0440 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Smar_1206 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Smar_1196 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Smar_0433 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Smar_0731 conserved hypothetical protein K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18]
D Smar_0935 RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D Smar_1436 ATP dependent DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
D Smar_0590 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D Smar_1075 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D Smar_0136 ferredoxin K05337 fer; ferredoxin
D Smar_0352 ferredoxin K05337 fer; ferredoxin
D Smar_1062 4Fe-4S ferredoxin, iron-sulfur binding domain protein K12143 hyfH; hydrogenase-4 component H
D Smar_0652 hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D
D Smar_1067 conserved hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D
D Smar_0654 Membrane bound protein complex subunit mbxG K14114 ehbE; energy-converting hydrogenase B subunit E
D Smar_1068 Na+/H+ antiporter MnhB subunit-related protein K14118 ehbI; energy-converting hydrogenase B subunit I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D Smar_1461 molybdopterin-guanine dinucleotide biosynthesis MobB region K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Smar_0915 transcriptional regulator, XRE family K03627 MBF1; putative transcription factor
D Smar_0966 nucleoid protein Alba K03622 ssh10b; archaea-specific DNA-binding protein
D Smar_0968 Alba, DNA/RNA-binding protein K03622 ssh10b; archaea-specific DNA-binding protein
D Smar_0943 Small nuclear ribonucleoprotein, LSM family K04796 RUXX; small nuclear ribonucleoprotein
D Smar_1304 Small nuclear ribonucleoprotein, LSM family K04796 RUXX; small nuclear ribonucleoprotein
D Smar_0526 conserved hypothetical protein K07743 K07743; transcriptional regulator
D Smar_0535 conserved hypothetical protein K07745 K07745; transcriptional regulator
C 99974 Translation
D Smar_0777 Protein of unknown function DUF655 K07572 K07572; putative nucleotide binding protein
D Smar_0870 beta-lactamase domain protein K07577 K07577; putative mRNA 3-end processing factor
D Smar_0475 conserved hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
D Smar_0633 methyltransferase K07579 K07579; putative methylase
D Smar_0715 Protein of unknown function DUF1610 K07580 K07580; Zn-ribbon RNA-binding protein
D Smar_0853 Protein of unknown function DUF54 K07581 K07581; RNA-binding protein
C 99975 Protein processing
D Smar_0013 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Smar_0171 hydrogenase formation HypD protein K04654 hypD; hydrogenase expression/formation protein HypD
D Smar_0012 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Smar_0479 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE
D Smar_0015 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Smar_0913 PUA domain containing protein K07398 K07398; conserved protein with predicted RNA binding PUA domain
D Smar_0033 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor
D Smar_0157 Nodulation efficiency protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Smar_0576 putative DNA methylase K07445 K07445; putative DNA methylase
D Smar_1291 TBP-interacting protein TIP49 K07472 TIP49; TBP-interacting protein
D Smar_0608 Translin K07477 K07477; translin
D Smar_0847 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Smar_1546 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Smar_0083 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Smar_0767 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Smar_1150 transposase, IS605 OrfB family K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Smar_0710 major facilitator superfamily MFS_1 K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Smar_0670 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Smar_0687 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Smar_0285 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D Smar_0145 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Smar_1467 KaiC domain protein K08482 kaiC; circadian clock protein KaiC
D Smar_1201 AAA ATPase K08482 kaiC; circadian clock protein KaiC
D Smar_1085 DNA-binding TFAR19-related protein K06875 PDCD5; programmed cell death protein 5
C 99992 Structural proteins
C 99994 Others
D Smar_0927 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Smar_0484 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D Smar_0210 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Smar_0144 ATPase, PilT family K06865 K06865; ATPase
D Smar_0383 ZPR1-related zinc finger protein K06874 K06874; zinc finger protein
D Smar_0096 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D Smar_1495 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D Smar_0448 methionyl-tRNA synthetase, beta subunit K06878 K06878; tRNA-binding protein
D Smar_0080 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D Smar_0199 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D Smar_0458 conserved hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D Smar_0116 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Smar_1361 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D Smar_0477 TatD-related deoxyribonuclease K07049 K07049; TatD-related deoxyribonuclease
D Smar_0625 Sjogrens syndrome scleroderma autoantigen 1 K07143 K07143; UPF0148 protein
D Smar_1244 Protein of unknown function DUF373 K08975 K08975; putative membrane protein
D Smar_1321 membrane protein-like protein K08979 K08979; putative membrane protein
C 99997 Function unknown
D Smar_1279 protein of unknown function DUF75 K06869 K06869; uncharacterized protein
D Smar_0912 protein of unknown function DUF75 K06869 K06869; uncharacterized protein
D Smar_0044 serine proteases-like protein K06870 K06870; uncharacterized protein
D Smar_1317 serine proteases-like protein K06870 K06870; uncharacterized protein
D Smar_1481 metal-dependent phosphohydrolase, HD region K06885 K06885; uncharacterized protein
D Smar_0061 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D Smar_0262 peptidase S15 K06889 K06889; uncharacterized protein
D Smar_0575 conserved hypothetical protein K06922 K06922; uncharacterized protein
D Smar_0495 protein of unknown function DUF134 K06933 K06933; uncharacterized protein
D Smar_0378 protein of unknown function DUF296 K06934 K06934; uncharacterized protein
D Smar_1327 Radical SAM domain protein K06935 K06935; uncharacterized protein
D Smar_0435 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Smar_1429 hypothetical protein K06940 K06940; uncharacterized protein
D Smar_1489 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Smar_0155 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D Smar_1326 metallophosphoesterase K06953 K06953; uncharacterized protein
D Smar_0437 photosystem I assembly BtpA K06971 K06971; uncharacterized protein
D Smar_0232 conserved hypothetical protein K06975 K06975; uncharacterized protein
D Smar_0367 methyltransferase-like protein K06983 K06983; uncharacterized protein
D Smar_0231 Predicted hydrolase of the metallo-beta-lactamase superfamily K07022 K07022; uncharacterized protein
D Smar_1571 hypothetical protein K07022 K07022; uncharacterized protein
D Smar_0115 SufBD protein K07033 K07033; uncharacterized protein
D Smar_0248 SufBD protein K07033 K07033; uncharacterized protein
D Smar_0937 beta-lactamase domain protein K07041 K07041; uncharacterized protein
D Smar_1336 protein of unknown function DUF35 K07068 K07068; uncharacterized protein
D Smar_0886 DNA polymerase, beta domain protein region K07073 K07073; uncharacterized protein
D Smar_0408 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Smar_1214 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Smar_0158 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Smar_0463 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Smar_1311 metallophosphoesterase K07096 K07096; uncharacterized protein
D Smar_0455 phosphoesterase K07096 K07096; uncharacterized protein
D Smar_1465 phosphoesterase, DHHA1 K07097 K07097; uncharacterized protein
D Smar_1410 hypothetical protein K07097 K07097; uncharacterized protein
D Smar_0605 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D Smar_0750 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D Smar_0682 transcriptional regulator-like protein K07108 K07108; uncharacterized protein
D Smar_0265 conserved hypothetical protein K07108 K07108; uncharacterized protein
D Smar_0880 t-RNA-binding domain protein K07135 K07135; uncharacterized protein
D Smar_0832 SSU processome protein Utp24 K07158 K07158; uncharacterized protein
D Smar_0079 protein of unknown function DUF763 K09003 K09003; uncharacterized protein
D Smar_0796 protein of unknown function DUF99 K09120 K09120; uncharacterized protein
D Smar_1308 protein of unknown function DUF82 K09122 K09122; uncharacterized protein
D Smar_0520 protein of unknown function DUF355 K09129 K09129; uncharacterized protein
D Smar_0527 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D Smar_1309 AMMECR1 domain protein K09141 K09141; uncharacterized protein
D Smar_1463 Protein of unknown function DUF429 K09147 K09147; uncharacterized protein
D Smar_1103 Protein of unknown function DUF424 K09148 K09148; uncharacterized protein
D Smar_0952 Protein of unknown function DUF432 K09149 K09149; uncharacterized protein
D Smar_0786 conserved hypothetical protein K09149 K09149; uncharacterized protein
D Smar_1297 Protein of unknown function DUF460 K09150 K09150; uncharacterized protein
D Smar_0266 protein of unknown function DUF438 K09155 K09155; uncharacterized protein
D Smar_0362 protein of unknown function DUF711 K09157 K09157; uncharacterized protein
D Smar_0371 conserved hypothetical protein K09163 K09163; uncharacterized protein
D Smar_1569 hypothetical protein K09167 K09167; uncharacterized protein
D Smar_0496 Protein of unknown function DUF504 K09715 K09715; uncharacterized protein
D Smar_0456 conserved hypothetical protein K09717 K09717; uncharacterized protein
D Smar_0626 Protein of unknown function UPF0147 K09721 K09721; uncharacterized protein
D Smar_0161 protein of unknown function DUF211 K09732 K09732; uncharacterized protein
D Smar_1235 Protein of unknown function DUF54 K09736 K09736; uncharacterized protein
D Smar_1178 conserved hypothetical protein K09737 K09737; uncharacterized protein
D Smar_0721 Protein of unknown function DUF371 K09738 K09738; uncharacterized protein
D Smar_0635 conserved hypothetical protein K09742 K09742; uncharacterized protein
D Smar_0038 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
D Smar_0165 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024